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Gene Dmel\CR14033

General Information
Symbol	Dmel\CR14033	Species	D. melanogaster
Name		Annotation symbol	CR14033
Feature type	pseudogene_attribute	FlyBase ID	FBgn0046776
Gene Model Status	Current	Stock availability	2 publicly available
Also Known As	CG14033
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	25D2-25D2	Sequence location	2L:5,242,707..5,244,239 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CR14033 (FBgn0046776). It is a pseudogene_attribute from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult midgut, adult heart, adult female reproductive system. Comments on Affy2 ProbeSet: ProbeSet 1630660_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CR14033. Gene sequence location is 2L:5242707..5244239.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	Sequence features BKN41595
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 25D2-25D2   Limits computationally determined from genome sequence between P{lacW}tkvk16713&P{lacW}l(2)k01302k01302 and P{lacW}vrik05901&P{PZ}cype03771
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CR14033 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Pseudogene similar to CG9203; transposed; partial.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt)   CR14033-RB FBtr0303308     1533
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence   Name AA392446   AA439645   AA440554   AA440768   AA441520   AA536494   AA803446   AA817574   AA941105   AA941584   AA942444   AA942530   AA950663   AI061701   AI455814   AI515752   AI516294   AI518089   AW942851   AY060378 AAL25417   BG638365   BG638647   BI166545   BI168123   BI232508   BI235380   BI238010   BI243366   BI353889   BI364205   BI365790   BI368980   BI370242   BT088892   BT125671   CO178957   CO266229   CO306802   CO306921   CO315843   CO339066   EC065696   EC194878   EC195877   EC215226   EC240531   EC258873   EV582736
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0046776    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0046776 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0046776 expression level Developmental Stage   Expression Level embryo 00-02hr    6016 embryo 02-04hr    8567 embryo 04-06hr    5659 embryo 06-08hr    1435 embryo 08-10hr    1900 embryo 10-12hr    1165 embryo 12-14hr    1658 embryo 14-16hr    1261 embryo 16-18hr    1370 embryo 18-20hr    535 embryo 20-22hr    1357 embryo 22-24hr    1698 larva L1    55 larva L2    369 larva L3 12hr old    1199 larva L3 puffstage 1-2    648 larva L3 puffstage 3-6    451 larva L3 puffstage 7-9    419 white prepupae new    309 white prepupae 12hr    224 white prepupae 24hr    255 pupae 2d postWPP    311 pupae 3d postWPP    271 pupae 4d postWPP    278 adult male 01day    417 adult male 05day    538 adult male 30day    460 adult female 01day    2066 adult female 05day    5307 adult female 30day    4717 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (6016) embryo 02-04hr  (8567) embryo 04-06hr  (5659) embryo 06-08hr  (1435) embryo 08-10hr  (1900) embryo 10-12hr  (1165) embryo 12-14hr  (1658) embryo 14-16hr  (1261) embryo 16-18hr  (1370) embryo 18-20hr  (535) embryo 20-22hr  (1357) embryo 22-24hr  (1698) larva L1    55 larva L2  (369) larva L3 12hr old  (1199) larva L3 puffstage 1-2  (648) larva L3 puffstage 3-6  (451) larva L3 puffstage 7-9  (419) white prepupae new  (309) white prepupae 12hr  (224) white prepupae 24hr  (255) pupae 2d postWPP  (311) pupae 3d postWPP  (271) pupae 4d postWPP  (278) adult male 01day  (417) adult male 05day  (538) adult male 30day  (460) adult female 01day  (2066) adult female 05day  (5307) adult female 30day  (4717) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (6016) embryo 02-04hr  (8567) embryo 04-06hr  (5659) embryo 06-08hr  1435 embryo 08-10hr  (1900) embryo 10-12hr    1165 embryo 12-14hr  (1658) embryo 14-16hr    1261 embryo 16-18hr    1370 embryo 18-20hr    535 embryo 20-22hr    1357 embryo 22-24hr  (1698) larva L1    55 larva L2    369 larva L3 12hr old    1199 larva L3 puffstage 1-2    648 larva L3 puffstage 3-6    451 larva L3 puffstage 7-9    419 white prepupae new    309 white prepupae 12hr    224 white prepupae 24hr    255 pupae 2d postWPP    311 pupae 3d postWPP    271 pupae 4d postWPP    278 adult male 01day    417 adult male 05day    538 adult male 30day    460 adult female 01day  (2066) adult female 05day  (5307) adult female 30day  (4717) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    6016 embryo 02-04hr    8567 embryo 04-06hr    5659 embryo 06-08hr    1435 embryo 08-10hr    1900 embryo 10-12hr    1165 embryo 12-14hr    1658 embryo 14-16hr    1261 embryo 16-18hr    1370 embryo 18-20hr    535 embryo 20-22hr    1357 embryo 22-24hr    1698 larva L1    55 larva L2    369 larva L3 12hr old    1199 larva L3 puffstage 1-2    648 larva L3 puffstage 3-6    451 larva L3 puffstage 7-9    419 white prepupae new    309 white prepupae 12hr    224 white prepupae 24hr    255 pupae 2d postWPP    311 pupae 3d postWPP    271 pupae 4d postWPP    278 adult male 01day    417 adult male 05day    538 adult male 30day    460 adult female 01day    2066 adult female 05day    5307 adult female 30day    4717 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    6016 embryo 02-04hr    8567 embryo 04-06hr    5659 embryo 06-08hr    1435 embryo 08-10hr    1900 embryo 10-12hr    1165 embryo 12-14hr    1658 embryo 14-16hr    1261 embryo 16-18hr    1370 embryo 18-20hr    535 embryo 20-22hr    1357 embryo 22-24hr    1698 larva L1    55 larva L2    369 larva L3 12hr old    1199 larva L3 puffstage 1-2    648 larva L3 puffstage 3-6    451 larva L3 puffstage 7-9    419 white prepupae new    309 white prepupae 12hr    224 white prepupae 24hr    255 pupae 2d postWPP    311 pupae 3d postWPP    271 pupae 4d postWPP    278 adult male 01day    417 adult male 05day    538 adult male 30day    460 adult female 01day    2066 adult female 05day    5307 adult female 30day    4717 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0046776 expression level Developmental Stage   Expression Level embryo 00-02hr    6016 embryo 02-04hr    8567 embryo 04-06hr    5659 embryo 06-08hr    1435 embryo 08-10hr    1900 embryo 10-12hr    1165 embryo 12-14hr    1658 embryo 14-16hr    1261 embryo 16-18hr    1370 embryo 18-20hr    535 embryo 20-22hr    1357 embryo 22-24hr    1698 larva L1    55 larva L2    369 larva L3 12hr old    1199 larva L3 puffstage 1-2    648 larva L3 puffstage 3-6    451 larva L3 puffstage 7-9    419 white prepupae new    309 white prepupae 12hr    224 white prepupae 24hr    255 pupae 2d postWPP    311 pupae 3d postWPP    271 pupae 4d postWPP    278 adult male 01day    417 adult male 05day    538 adult male 30day    460 adult female 01day    2066 adult female 05day    5307 adult female 30day    4717 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (6016) embryo 02-04hr  (8567) embryo 04-06hr  (5659) embryo 06-08hr  (1435) embryo 08-10hr  (1900) embryo 10-12hr  (1165) embryo 12-14hr  (1658) embryo 14-16hr  (1261) embryo 16-18hr  (1370) embryo 18-20hr  (535) embryo 20-22hr  (1357) embryo 22-24hr  (1698) larva L1    55 larva L2  (369) larva L3 12hr old  (1199) larva L3 puffstage 1-2  (648) larva L3 puffstage 3-6  (451) larva L3 puffstage 7-9  (419) white prepupae new  (309) white prepupae 12hr  (224) white prepupae 24hr  (255) pupae 2d postWPP  (311) pupae 3d postWPP  (271) pupae 4d postWPP  (278) adult male 01day  (417) adult male 05day  (538) adult male 30day  (460) adult female 01day  (2066) adult female 05day  (5307) adult female 30day  (4717) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (6016) embryo 02-04hr  (8567) embryo 04-06hr  (5659) embryo 06-08hr  1435 embryo 08-10hr  1900 embryo 10-12hr    1165 embryo 12-14hr  1658 embryo 14-16hr    1261 embryo 16-18hr    1370 embryo 18-20hr    535 embryo 20-22hr    1357 embryo 22-24hr  1698 larva L1    55 larva L2    369 larva L3 12hr old    1199 larva L3 puffstage 1-2    648 larva L3 puffstage 3-6    451 larva L3 puffstage 7-9    419 white prepupae new    309 white prepupae 12hr    224 white prepupae 24hr    255 pupae 2d postWPP    311 pupae 3d postWPP    271 pupae 4d postWPP    278 adult male 01day    417 adult male 05day    538 adult male 30day    460 adult female 01day  2066 adult female 05day  (5307) adult female 30day  (4717) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    6016 embryo 02-04hr    8567 embryo 04-06hr    5659 embryo 06-08hr    1435 embryo 08-10hr    1900 embryo 10-12hr    1165 embryo 12-14hr    1658 embryo 14-16hr    1261 embryo 16-18hr    1370 embryo 18-20hr    535 embryo 20-22hr    1357 embryo 22-24hr    1698 larva L1    55 larva L2    369 larva L3 12hr old    1199 larva L3 puffstage 1-2    648 larva L3 puffstage 3-6    451 larva L3 puffstage 7-9    419 white prepupae new    309 white prepupae 12hr    224 white prepupae 24hr    255 pupae 2d postWPP    311 pupae 3d postWPP    271 pupae 4d postWPP    278 adult male 01day    417 adult male 05day    538 adult male 30day    460 adult female 01day    2066 adult female 05day    5307 adult female 30day    4717 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    6016 embryo 02-04hr    8567 embryo 04-06hr    5659 embryo 06-08hr    1435 embryo 08-10hr    1900 embryo 10-12hr    1165 embryo 12-14hr    1658 embryo 14-16hr    1261 embryo 16-18hr    1370 embryo 18-20hr    535 embryo 20-22hr    1357 embryo 22-24hr    1698 larva L1    55 larva L2    369 larva L3 12hr old    1199 larva L3 puffstage 1-2    648 larva L3 puffstage 3-6    451 larva L3 puffstage 7-9    419 white prepupae new    309 white prepupae 12hr    224 white prepupae 24hr    255 pupae 2d postWPP    311 pupae 3d postWPP    271 pupae 4d postWPP    278 adult male 01day    417 adult male 05day    538 adult male 30day    460 adult female 01day    2066 adult female 05day    5307 adult female 30day    4717 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0046776    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0046776 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult midgut, adult heart, adult female reproductive system. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0046776 expression level Tissue   Expression Level Larval Central Nervous System    27.3 Larval Midgut    60.1 Larval Hindgut    20.1 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    1.1 Larval Trachea    6.3 Larval Carcass    8.55 Adult Head no informative data Adult Eye    20.475 Adult Brain    37.8 Adult Thoracic-Abdominal Ganglion    64.7 Adult Crop    5.3 Adult Midgut    152.7 Adult Hindgut    37.7 Adult Malpighian Tubules    6.7 Adult Fat Body    3.8 Adult Salivary Gland    5.4 Adult Heart    107.55 Adult VirginFemale Spermatheca    150.4 Adult InseminatedFemale Spermatheca    157.2 Adult Ovary    407.6 Adult Testis    43.3 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    27.3 Larval Midgut    60.1 Larval Hindgut    20.1 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    1.1 Larval Trachea    6.3 Larval Carcass    8.55 Adult Head no informative data Adult Eye    20.475 Adult Brain    37.8 Adult Thoracic-Abdominal Ganglion    64.7 Adult Crop    5.3 Adult Midgut    152.7 Adult Hindgut    37.7 Adult Malpighian Tubules    6.7 Adult Fat Body    3.8 Adult Salivary Gland    5.4 Adult Heart    107.55 Adult VirginFemale Spermatheca    150.4 Adult InseminatedFemale Spermatheca    157.2 Adult Ovary    407.6 Adult Testis    43.3 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    27.3 Larval Midgut    60.1 Larval Hindgut    20.1 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    1.1 Larval Trachea    6.3 Larval Carcass    8.55 Adult Head no informative data Adult Eye    20.475 Adult Brain    37.8 Adult Thoracic-Abdominal Ganglion    64.7 Adult Crop    5.3 Adult Midgut    152.7 Adult Hindgut    37.7 Adult Malpighian Tubules    6.7 Adult Fat Body    3.8 Adult Salivary Gland    5.4 Adult Heart    107.55 Adult VirginFemale Spermatheca    150.4 Adult InseminatedFemale Spermatheca    157.2 Adult Ovary    407.6 Adult Testis    43.3 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    27.3 Larval Midgut    60.1 Larval Hindgut    20.1 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    1.1 Larval Trachea    6.3 Larval Carcass    8.55 Adult Head no informative data Adult Eye    20.475 Adult Brain    37.8 Adult Thoracic-Abdominal Ganglion    64.7 Adult Crop    5.3 Adult Midgut    152.7 Adult Hindgut    37.7 Adult Malpighian Tubules    6.7 Adult Fat Body    3.8 Adult Salivary Gland    5.4 Adult Heart    107.55 Adult VirginFemale Spermatheca    150.4 Adult InseminatedFemale Spermatheca    157.2 Adult Ovary    407.6 Adult Testis    43.3 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0046776 expression level Tissue   Expression Level Larval Central Nervous System    27.3 Larval Midgut    60.1 Larval Hindgut    20.1 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    1.1 Larval Trachea    6.3 Larval Carcass    8.55 Adult Head no informative data Adult Eye    20.475 Adult Brain    37.8 Adult Thoracic-Abdominal Ganglion    64.7 Adult Crop    5.3 Adult Midgut    152.7 Adult Hindgut    37.7 Adult Malpighian Tubules    6.7 Adult Fat Body    3.8 Adult Salivary Gland    5.4 Adult Heart    107.55 Adult VirginFemale Spermatheca    150.4 Adult InseminatedFemale Spermatheca    157.2 Adult Ovary    407.6 Adult Testis    43.3 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    27.3 Larval Midgut    60.1 Larval Hindgut    20.1 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    1.1 Larval Trachea    6.3 Larval Carcass    8.55 Adult Head no informative data Adult Eye    20.475 Adult Brain    37.8 Adult Thoracic-Abdominal Ganglion    64.7 Adult Crop    5.3 Adult Midgut    152.7 Adult Hindgut    37.7 Adult Malpighian Tubules    6.7 Adult Fat Body    3.8 Adult Salivary Gland    5.4 Adult Heart    107.55 Adult VirginFemale Spermatheca    150.4 Adult InseminatedFemale Spermatheca    157.2 Adult Ovary    407.6 Adult Testis    43.3 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    27.3 Larval Midgut    60.1 Larval Hindgut    20.1 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    1.1 Larval Trachea    6.3 Larval Carcass    8.55 Adult Head no informative data Adult Eye    20.475 Adult Brain    37.8 Adult Thoracic-Abdominal Ganglion    64.7 Adult Crop    5.3 Adult Midgut    152.7 Adult Hindgut    37.7 Adult Malpighian Tubules    6.7 Adult Fat Body    3.8 Adult Salivary Gland    5.4 Adult Heart    107.55 Adult VirginFemale Spermatheca    150.4 Adult InseminatedFemale Spermatheca    157.2 Adult Ovary    407.6 Adult Testis    43.3 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    27.3 Larval Midgut    60.1 Larval Hindgut    20.1 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    1.1 Larval Trachea    6.3 Larval Carcass    8.55 Adult Head no informative data Adult Eye    20.475 Adult Brain    37.8 Adult Thoracic-Abdominal Ganglion    64.7 Adult Crop    5.3 Adult Midgut    152.7 Adult Hindgut    37.7 Adult Malpighian Tubules    6.7 Adult Fat Body    3.8 Adult Salivary Gland    5.4 Adult Heart    107.55 Adult VirginFemale Spermatheca    150.4 Adult InseminatedFemale Spermatheca    157.2 Adult Ovary    407.6 Adult Testis    43.3 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body no informative data Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head no informative data Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland no informative data Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    no informative data   NA  Eye    20.475   NA  Brain    37.8   27.3  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    64.7   NA  Crop    5.3   60.1  Midgut    152.7   20.1  Hindgut    37.7   2.9  Malpighian Tubules    6.7   no informative data  Fat Body    3.8   1.1  Salivary Gland    5.4   NA  Heart    107.55   6.3  Trachea    NA   NA  VirginFemale Spermatheca    150.4   NA  InseminatedFemale Spermatheca    157.2   NA  Ovary    407.6   NA  Testis    43.3   NA  Male Accessory Gland    no informative data   8.55  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_01
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0046776 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG14033-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CR14033GD12463 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CR14033 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CR14033 Class Mutagen Stocks Known lesion CR14033GD12463 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel6011 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}tkvKG01923 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	non_protein_coding_gene (FlyBase Genome Annotators, 2010) nuclear_gene   pseudogene_attribute (FlyBase Genome Annotators, 2010)
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CR14033 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0046776
Orthologs
Genome-wide drosophilid orthologs	Dsec\GM18541
Curated drosophilid orthologs
Linkouts
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
VDRC	v23052 w1118; P{GD12463}v23052 v23053 w1118; P{GD12463}v23053
Genomic Clones ( 2 )
	BACR05M06 BACR25K01 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 39 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD26673
Other clones	MIP11944 MIP26615
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GM13194 GM25487 LD11316 LD14264 LD15370 LD15642 LD16488 LD17128 LD25068 LD25788 LD26794 LD30583 LD31661 LD33781 LD35516 LD37506 LD41414 LD42115 RE06704 RE08677 RE28584 RE31220 RE34365 RE40982 RE49269 RE51169 RE55050 RE56693
Other clones	Dmel_dig_005621_0721_0602 EK058042 EK145502 EK252426 EK252806 EK262661 EP00724 LD23535
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0046776 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 50420
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: BcDNA:LD26673 CG14033 (FlyBase, 1996-) Source for merge of: CG14033 BcDNA:LD26231 (FlyBase, 1996-)
Additional comments	Source for merge of CG14033 BcDNA:LD26231 was a shared cDNA (date:020730). (FlyBase, 1996-) Source for merge of BcDNA:LD26673 CG14033 was a shared cDNA (date:030206). (FlyBase, 1996-)
Other Comments
	Annotation CG14033 renamed CR14033 in release 5.28 of the genome annotation. (FlyBase Genome Annotators, 2010) dsRNA has been made from templates generated with primers directed against this gene. (Pilot et al., 2006)
External Crossreferences & Linkouts
Sequence Crossreferences
	DDBJ / EMBL / GenBank • AA942444 AAF52231 AAL25417 AW942851 AY060378 Entrez Gene - A searchable database of RefSeq genes. • 50420 UniProtKB/TrEMBL • Q9VMT0
Other Crossreferences
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0046776 DRSC - Results from RNAi screens. • FBgn0046776 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0046776 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG14033-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0046776 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 50420 modMine - Data generated by the modENCODE project. • FBgn0046776
Synonyms & Secondary IDs ( 4 )
Reported As
Symbol Synonym	BcDNA:LD26231   BcDNA:LD26673   CG14033 (Pilot et al., 2006, Czech et al., 2008, ) CR14033 (FlyBase Genome Annotators, 2010)
Name Synonym
Secondary FlyBase IDs
	FBgn0040946 FBgn0046777
References ( 11 )
Research paper	Czech et al., 2008, Nature 453(7196): 798--802 An endogenous small interfering RNA pathway in Drosophila. [FBrf0205160] Pilot et al., 2006, Development 133(4): 711--723 Developmental control of nuclear morphogenesis and anchoring by charleston, identified in a functional genomic screen of Drosophila cellularisation. [FBrf0190315]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase Genome Annotators, 2010, Changes affecting gene model number or type in release 5.28 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 5.28 of the annotated D.melanogaster genome. [FBrf0210498] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]