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Gene Dmel\Obp83ef

General Information
Symbol	Dmel\Obp83ef	Species	D. melanogaster
Name	Odorant-binding protein 83ef	Annotation symbol	CG31557
Feature type	protein_coding_gene	FlyBase ID	FBgn0046876
Gene Model Status	Current	Stock availability	3 publicly available
Also Known As	CG15583, Obp83e, 83f
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	83D4-83D4	Sequence location	3R:1,935,364..1,936,756 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Odorant-binding protein 83ef is referred to in FlyBase by the symbol Dmel\Obp83ef (CG31557, FBgn0046876). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Pheromone/general odorant binding protein; Pheromone/general odorant binding protein, PBP/GOBP, domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of no expression detected. Peak expression observed during late larval stages, at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval fat body. Comments on Affy2 ProbeSet: ProbeSet 1623289_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Obp83ef. Gene sequence location is 3R:1935364..1936756.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 83D4-83D4   Limits computationally determined from genome sequence between P{lacW}casj1C2 and P{PZ}lab01241
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Obp83ef for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.50
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Obp83ef-RA FBtr0078618  NM_169125   901   245
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Obp83ef-PA   FBpp0078267   28.0   245   5.48     NP_731042   AAF51918
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Pheromone/general odorant binding protein (IPR006170) Pheromone/general odorant binding protein, PBP/GOBP, domain (IPR023316)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF51918   BT023300   BT029407   CO177945   CO195026   CO344772   CZ478807   EC195785   EC258598   EL870278   EL870279   EL870284
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VNL2
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References regulatory region FBsf0000435199 3R:1,936,729..1,939,729 evidence=Reporter construct (in vivo) (Galindo and Smith, 2001, Halfon, 2012.6.19)
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval fat body. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    1.9 Larval Midgut    2.8 Larval Hindgut    6.7 Larval Malpighian Tubules    7.8 Larval Fat Body    725.2 Larval Salivary Gland    6.7 Larval Trachea    3.15 Larval Carcass    2.875 Adult Head    36.1 Adult Eye    24.65 Adult Brain    8.1 Adult Thoracic-Abdominal Ganglion    3.7 Adult Crop    6.1 Adult Midgut    4.5 Adult Hindgut    5.9 Adult Malpighian Tubules    5.8 Adult Fat Body    77.3 Adult Salivary Gland    5 Adult Heart    73.825 Adult VirginFemale Spermatheca    33.6 Adult InseminatedFemale Spermatheca    38.8 Adult Ovary    0.8 Adult Testis    4.1 Adult Male Accessory Gland    9 Adult Carcass    65 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    1.9 Larval Midgut    2.8 Larval Hindgut    6.7 Larval Malpighian Tubules    7.8 Larval Fat Body  (725.2) Larval Salivary Gland    6.7 Larval Trachea    3.15 Larval Carcass    2.875 Adult Head    36.1 Adult Eye    24.65 Adult Brain    8.1 Adult Thoracic-Abdominal Ganglion    3.7 Adult Crop    6.1 Adult Midgut    4.5 Adult Hindgut    5.9 Adult Malpighian Tubules    5.8 Adult Fat Body    77.3 Adult Salivary Gland    5 Adult Heart    73.825 Adult VirginFemale Spermatheca    33.6 Adult InseminatedFemale Spermatheca    38.8 Adult Ovary    0.8 Adult Testis    4.1 Adult Male Accessory Gland    9 Adult Carcass    65 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    1.9 Larval Midgut    2.8 Larval Hindgut    6.7 Larval Malpighian Tubules    7.8 Larval Fat Body    725.2 Larval Salivary Gland    6.7 Larval Trachea    3.15 Larval Carcass    2.875 Adult Head    36.1 Adult Eye    24.65 Adult Brain    8.1 Adult Thoracic-Abdominal Ganglion    3.7 Adult Crop    6.1 Adult Midgut    4.5 Adult Hindgut    5.9 Adult Malpighian Tubules    5.8 Adult Fat Body    77.3 Adult Salivary Gland    5 Adult Heart    73.825 Adult VirginFemale Spermatheca    33.6 Adult InseminatedFemale Spermatheca    38.8 Adult Ovary    0.8 Adult Testis    4.1 Adult Male Accessory Gland    9 Adult Carcass    65 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    1.9 Larval Midgut    2.8 Larval Hindgut    6.7 Larval Malpighian Tubules    7.8 Larval Fat Body    725.2 Larval Salivary Gland    6.7 Larval Trachea    3.15 Larval Carcass    2.875 Adult Head    36.1 Adult Eye    24.65 Adult Brain    8.1 Adult Thoracic-Abdominal Ganglion    3.7 Adult Crop    6.1 Adult Midgut    4.5 Adult Hindgut    5.9 Adult Malpighian Tubules    5.8 Adult Fat Body    77.3 Adult Salivary Gland    5 Adult Heart    73.825 Adult VirginFemale Spermatheca    33.6 Adult InseminatedFemale Spermatheca    38.8 Adult Ovary    0.8 Adult Testis    4.1 Adult Male Accessory Gland    9 Adult Carcass    65 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    1.9 Larval Midgut    2.8 Larval Hindgut    6.7 Larval Malpighian Tubules    7.8 Larval Fat Body    725.2 Larval Salivary Gland    6.7 Larval Trachea    3.15 Larval Carcass    2.875 Adult Head    36.1 Adult Eye    24.65 Adult Brain    8.1 Adult Thoracic-Abdominal Ganglion    3.7 Adult Crop    6.1 Adult Midgut    4.5 Adult Hindgut    5.9 Adult Malpighian Tubules    5.8 Adult Fat Body    77.3 Adult Salivary Gland    5 Adult Heart    73.825 Adult VirginFemale Spermatheca    33.6 Adult InseminatedFemale Spermatheca    38.8 Adult Ovary    0.8 Adult Testis    4.1 Adult Male Accessory Gland    9 Adult Carcass    65 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    1.9 Larval Midgut    2.8 Larval Hindgut    6.7 Larval Malpighian Tubules    7.8 Larval Fat Body  725.2 Larval Salivary Gland    6.7 Larval Trachea    3.15 Larval Carcass    2.875 Adult Head    36.1 Adult Eye    24.65 Adult Brain    8.1 Adult Thoracic-Abdominal Ganglion    3.7 Adult Crop    6.1 Adult Midgut    4.5 Adult Hindgut    5.9 Adult Malpighian Tubules    5.8 Adult Fat Body    77.3 Adult Salivary Gland    5 Adult Heart    73.825 Adult VirginFemale Spermatheca    33.6 Adult InseminatedFemale Spermatheca    38.8 Adult Ovary    0.8 Adult Testis    4.1 Adult Male Accessory Gland    9 Adult Carcass    65 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    1.9 Larval Midgut    2.8 Larval Hindgut    6.7 Larval Malpighian Tubules    7.8 Larval Fat Body    725.2 Larval Salivary Gland    6.7 Larval Trachea    3.15 Larval Carcass    2.875 Adult Head    36.1 Adult Eye    24.65 Adult Brain    8.1 Adult Thoracic-Abdominal Ganglion    3.7 Adult Crop    6.1 Adult Midgut    4.5 Adult Hindgut    5.9 Adult Malpighian Tubules    5.8 Adult Fat Body    77.3 Adult Salivary Gland    5 Adult Heart    73.825 Adult VirginFemale Spermatheca    33.6 Adult InseminatedFemale Spermatheca    38.8 Adult Ovary    0.8 Adult Testis    4.1 Adult Male Accessory Gland    9 Adult Carcass    65 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    1.9 Larval Midgut    2.8 Larval Hindgut    6.7 Larval Malpighian Tubules    7.8 Larval Fat Body    725.2 Larval Salivary Gland    6.7 Larval Trachea    3.15 Larval Carcass    2.875 Adult Head    36.1 Adult Eye    24.65 Adult Brain    8.1 Adult Thoracic-Abdominal Ganglion    3.7 Adult Crop    6.1 Adult Midgut    4.5 Adult Hindgut    5.9 Adult Malpighian Tubules    5.8 Adult Fat Body    77.3 Adult Salivary Gland    5 Adult Heart    73.825 Adult VirginFemale Spermatheca    33.6 Adult InseminatedFemale Spermatheca    38.8 Adult Ovary    0.8 Adult Testis    4.1 Adult Male Accessory Gland    9 Adult Carcass    65 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    36.1   NA  Eye    no informative data   NA  Brain    8.1   1.9  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    3.7   NA  Crop    6.1   2.8  Midgut    4.5   6.7  Hindgut    5.9   7.8  Malpighian Tubules    5.8   725.2  Fat Body    77.3   6.7  Salivary Gland    5   NA  Heart    73.825   3.15  Trachea    NA   NA  VirginFemale Spermatheca    33.6   NA  InseminatedFemale Spermatheca    38.8   NA  Ovary    0.8   NA  Testis    4.1   NA  Male Accessory Gland    9   2.875  Carcass    65 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    1 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    6 head, virgin 20-day female    11 head, mated 1-day female    9 head, mated 4-day female    10 head, mated 20-day female    10 head, mated 1-day male    3 head, mated 4-day male    6 head, mated 20-day male    12 salivary gland, larvae L3 wandering    12 salivary gland, white prepupae    19 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    1 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    37 fat body, white prepupae    185 fat body, pupae P8    141 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    5 carcass, 20-day adult    6 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    1 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    6 head, virgin 20-day female    11 head, mated 1-day female    9 head, mated 4-day female    10 head, mated 20-day female    10 head, mated 1-day male    3 head, mated 4-day male    6 head, mated 20-day male    12 salivary gland, larvae L3 wandering    12 salivary gland, white prepupae    19 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    1 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering  (37) fat body, white prepupae  (185) fat body, pupae P8  (141) carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    5 carcass, 20-day adult    6 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    1 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    6 head, virgin 20-day female    11 head, mated 1-day female    9 head, mated 4-day female    10 head, mated 20-day female    10 head, mated 1-day male    3 head, mated 4-day male    6 head, mated 20-day male    12 salivary gland, larvae L3 wandering    12 salivary gland, white prepupae    19 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    1 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    37 fat body, white prepupae  (185) fat body, pupae P8  (141) carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    5 carcass, 20-day adult    6 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    1 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    6 head, virgin 20-day female    11 head, mated 1-day female    9 head, mated 4-day female    10 head, mated 20-day female    10 head, mated 1-day male    3 head, mated 4-day male    6 head, mated 20-day male    12 salivary gland, larvae L3 wandering    12 salivary gland, white prepupae    19 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    1 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    37 fat body, white prepupae    185 fat body, pupae P8    141 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    5 carcass, 20-day adult    6 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    1 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    6 head, virgin 20-day female    11 head, mated 1-day female    9 head, mated 4-day female    10 head, mated 20-day female    10 head, mated 1-day male    3 head, mated 4-day male    6 head, mated 20-day male    12 salivary gland, larvae L3 wandering    12 salivary gland, white prepupae    19 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    1 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    37 fat body, white prepupae    185 fat body, pupae P8    141 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    5 carcass, 20-day adult    6 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    1 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    6 head, virgin 20-day female    11 head, mated 1-day female    9 head, mated 4-day female    10 head, mated 20-day female    10 head, mated 1-day male    3 head, mated 4-day male    6 head, mated 20-day male    12 salivary gland, larvae L3 wandering    12 salivary gland, white prepupae    19 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    1 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering  (37) fat body, white prepupae  (185) fat body, pupae P8  (141) carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    5 carcass, 20-day adult    6 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    1 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    6 head, virgin 20-day female    11 head, mated 1-day female    9 head, mated 4-day female    10 head, mated 20-day female    10 head, mated 1-day male    3 head, mated 4-day male    6 head, mated 20-day male    12 salivary gland, larvae L3 wandering    12 salivary gland, white prepupae    19 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    1 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    37 fat body, white prepupae  (185) fat body, pupae P8  141 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    5 carcass, 20-day adult    6 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    1 central nervous system, pupae P8    2 head, virgin 1-day female    3 head, virgin 4-day female    6 head, virgin 20-day female    11 head, mated 1-day female    9 head, mated 4-day female    10 head, mated 20-day female    10 head, mated 1-day male    3 head, mated 4-day male    6 head, mated 20-day male    12 salivary gland, larvae L3 wandering    12 salivary gland, white prepupae    19 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    1 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    37 fat body, white prepupae    185 fat body, pupae P8    141 carcass, larvae L3 wandering    3 carcass, 1-day adult    3 carcass, 4-day adult    5 carcass, 20-day adult    6 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of no expression detected. Peak expression observed during late larval stages, at stages throughout the pupal period. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    4 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    1 larva L2    1 larva L3 12hr old    4 larva L3 puffstage 1-2    3 larva L3 puffstage 3-6    19 larva L3 puffstage 7-9    56 white prepupae new    59 white prepupae 12hr    78 white prepupae 24hr    86 pupae 2d postWPP    92 pupae 3d postWPP    35 pupae 4d postWPP    13 adult male 01day    9 adult male 05day    3 adult male 30day    3 adult female 01day    6 adult female 05day    6 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    4 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    1 larva L2    1 larva L3 12hr old    4 larva L3 puffstage 1-2    3 larva L3 puffstage 3-6    19 larva L3 puffstage 7-9  (56) white prepupae new  (59) white prepupae 12hr  (78) white prepupae 24hr  (86) pupae 2d postWPP  (92) pupae 3d postWPP  (35) pupae 4d postWPP    13 adult male 01day    9 adult male 05day    3 adult male 30day    3 adult female 01day    6 adult female 05day    6 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    4 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    1 larva L2    1 larva L3 12hr old    4 larva L3 puffstage 1-2    3 larva L3 puffstage 3-6    19 larva L3 puffstage 7-9    56 white prepupae new    59 white prepupae 12hr    78 white prepupae 24hr    86 pupae 2d postWPP    92 pupae 3d postWPP    35 pupae 4d postWPP    13 adult male 01day    9 adult male 05day    3 adult male 30day    3 adult female 01day    6 adult female 05day    6 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    4 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    1 larva L2    1 larva L3 12hr old    4 larva L3 puffstage 1-2    3 larva L3 puffstage 3-6    19 larva L3 puffstage 7-9    56 white prepupae new    59 white prepupae 12hr    78 white prepupae 24hr    86 pupae 2d postWPP    92 pupae 3d postWPP    35 pupae 4d postWPP    13 adult male 01day    9 adult male 05day    3 adult male 30day    3 adult female 01day    6 adult female 05day    6 adult female 30day    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    4 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    1 larva L2    1 larva L3 12hr old    4 larva L3 puffstage 1-2    3 larva L3 puffstage 3-6    19 larva L3 puffstage 7-9    56 white prepupae new    59 white prepupae 12hr    78 white prepupae 24hr    86 pupae 2d postWPP    92 pupae 3d postWPP    35 pupae 4d postWPP    13 adult male 01day    9 adult male 05day    3 adult male 30day    3 adult female 01day    6 adult female 05day    6 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    4 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    1 larva L2    1 larva L3 12hr old    4 larva L3 puffstage 1-2    3 larva L3 puffstage 3-6    19 larva L3 puffstage 7-9  (56) white prepupae new  (59) white prepupae 12hr  (78) white prepupae 24hr  (86) pupae 2d postWPP  (92) pupae 3d postWPP  (35) pupae 4d postWPP    13 adult male 01day    9 adult male 05day    3 adult male 30day    3 adult female 01day    6 adult female 05day    6 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    4 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    1 larva L2    1 larva L3 12hr old    4 larva L3 puffstage 1-2    3 larva L3 puffstage 3-6    19 larva L3 puffstage 7-9    56 white prepupae new    59 white prepupae 12hr    78 white prepupae 24hr    86 pupae 2d postWPP    92 pupae 3d postWPP    35 pupae 4d postWPP    13 adult male 01day    9 adult male 05day    3 adult male 30day    3 adult female 01day    6 adult female 05day    6 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    4 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    1 larva L2    1 larva L3 12hr old    4 larva L3 puffstage 1-2    3 larva L3 puffstage 3-6    19 larva L3 puffstage 7-9    56 white prepupae new    59 white prepupae 12hr    78 white prepupae 24hr    86 pupae 2d postWPP    92 pupae 3d postWPP    35 pupae 4d postWPP    13 adult male 01day    9 adult male 05day    3 adult male 30day    3 adult female 01day    6 adult female 05day    6 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    7 heat shock, 4-day adult    1 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    20 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    6 Ethanol 2.5% 3 hrs, larvae L3    2 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    2 Paraquat 10 mM 48 hrs, 4-day adult    1 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    7 heat shock, 4-day adult    1 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    20 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    6 Ethanol 2.5% 3 hrs, larvae L3    2 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    2 Paraquat 10 mM 48 hrs, 4-day adult    1 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    7 heat shock, 4-day adult    1 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    20 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    6 Ethanol 2.5% 3 hrs, larvae L3    2 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    2 Paraquat 10 mM 48 hrs, 4-day adult    1 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    7 heat shock, 4-day adult    1 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    20 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    6 Ethanol 2.5% 3 hrs, larvae L3    2 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    2 Paraquat 10 mM 48 hrs, 4-day adult    1 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    7 heat shock, 4-day adult    1 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    20 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    6 Ethanol 2.5% 3 hrs, larvae L3    2 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    2 Paraquat 10 mM 48 hrs, 4-day adult    1 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    7 heat shock, 4-day adult    1 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    20 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    6 Ethanol 2.5% 3 hrs, larvae L3    2 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    2 Paraquat 10 mM 48 hrs, 4-day adult    1 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    7 heat shock, 4-day adult    1 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    20 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    6 Ethanol 2.5% 3 hrs, larvae L3    2 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    2 Paraquat 10 mM 48 hrs, 4-day adult    1 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    7 heat shock, 4-day adult    1 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    20 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    6 Ethanol 2.5% 3 hrs, larvae L3    2 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    2 Paraquat 10 mM 48 hrs, 4-day adult    1 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_25
External Data & Images
Linkouts	BDGP expression data • IP02370 IP02371 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0046876 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31557-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable Obp83efe00978 viable, with Scer\GAL4pnr-MD237 Obp83efGD5605 Sterility Allele fertile Obp83efe00978 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of Obp83ef Class Mutagen Stocks Known lesion Obp83efe00978 piggyBac transposase 2 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Obp83ef Class Mutagen Stocks Known lesion Obp83efGD5605 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data reporter construct P{Obp83ef-lacZ.G} No UAS construct P{GD5605} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{RB}Obp83efe00978 NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
odorant binding inferred from sequence alignment with UniProtKB:P34174 (Hekmat-Scafe et al., 2002) inferred from sequence or structural similarity with lush (Vieira and Rozas, 2011) inferred from sequence or structural similarity with UniProtKB:P34174 (Galindo and Smith, 2001) non-traceable author statement (Robertson, 2000.4.16)
Biological Process
CV term Evidence References
sensory perception of chemical stimulus inferred from sequence alignment with UniProtKB:P34174 (Hekmat-Scafe et al., 2002) inferred from sequence or structural similarity with lush (Vieira and Rozas, 2011) inferred from sequence or structural similarity with UniProtKB:P34174 (Galindo and Smith, 2001)
Cellular Component
CV term Evidence References
extracellular region inferred from sequence model (Vieira and Rozas, 2011)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
Obp83ef - eIF4AIII anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Obp83ef allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0046876
Orthologs
OrthoDB Orthologs (12) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG67M2J5 Dipteran inclusive ortholog search No orthologs identified Insect inclusive ortholog search No orthologs identified Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG67M2J5)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Obp83ef     Drosophila simulans   Dsim\Obp83ef Y   Drosophila sechellia   Dsec\Obp83ef Y   Drosophila erecta   Dere\Obp83ef Y   Drosophila yakuba   Dyak\Obp83ef Y   Drosophila ananassae   Dana\Obp83ef Y   Drosophila pseudoobscura pseudoobscura   Dpse\Obp83ef Y   Drosophila persimilis   Dper\Obp83ef Y   Drosophila willistoni   Dwil\Obp83ef Y   Drosophila virilis   Dvir\Obp83ef Y   Drosophila mojavensis   Dmoj\Obp83ef Y   Drosophila grimshawi   Dgri\Obp83ef Y
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\Obp83ef Drosophila sechellia Dsec\Obp83ef Drosophila erecta Dere\Obp83ef Drosophila yakuba Dyak\Obp83ef Drosophila ananassae Dana\Obp83ef Drosophila pseudoobscura pseudoobscura Dpse\Obp83ef Drosophila persimilis Dper\Obp83ef Drosophila willistoni Dwil\Obp83ef Drosophila virilis Dvir\Obp83ef Drosophila mojavensis Dmoj\Obp83ef Drosophila grimshawi Dgri\Obp83ef
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Bloomington	17909 w1118; PBac{RB}Obp83efe00978
Harvard	- PBac{RB}Obp83efe00978
VDRC	v18814 w1118; P{GD5605}v18814/CyO
Genomic Clones ( 1 )
	BACR29J02 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 8 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	IP02370 IP02371
Other clones	DPiM_IP02370
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones	EC39605 EK054750 EP19853 IP02369 IP02372
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0046876 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40747
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments	"Obp83e" and "Obp83f" were treated as separate genes in FBrf0141547, but in FBrf0151320 it was reported that they form a single gene with two six-cysteine OBP motifs joined together. RT-PCR with primers that cross the boundary of the two six-cysteine motifs produces a single band, confirming that "Obp83e" and "Obp83f" are encoded by a single transcript. This is also supported by direct sequencing of the PCR products. The single gene that incorporates "Obp83e" and "Obp83f" is named Obp83ef to reflect its hybrid nature. (Zhou et al., 2004) Annotation CG15583 split into CG31557 (Obp83ef), CG31558 (Obp83g) in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_169125 RefSeq (Proteins) • NP_731042 DDBJ / EMBL / GenBank • AAF51918 CZ478807 Entrez Gene - A searchable database of RefSeq genes. • 40747 UniProtKB/TrEMBL • Q9VNL2
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Pheromone/general odorant binding protein (IPR006170) Pheromone/general odorant binding protein, PBP/GOBP, domain (IPR023316) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • IP02370 IP02371
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0046876 DRSC - Results from RNAi screens. • FBgn0046876 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0046876 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31557-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0046876 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40747 modMine - Data generated by the modENCODE project. • FBgn0046876 REDfly - A database of transcriptional regulatory elements. • FBgn0046876
Synonyms & Secondary IDs ( 13 )
Reported As
Symbol Synonym	83f (Smith, 2002.1.14, Galindo and Smith, 2001) 83f-1 (Graham and Davies, 2002) 83f-2 (Graham and Davies, 2002) CG15583 (Graham, 2002.6.18, Vogt et al., 2002, Ponting et al., 2001, Robertson, 2000.8.17, Robertson, 2000.4.16, ) CG31557 (Zhou et al., 2004, ) DmelObp83ef (Vieira and Rozas, 2011) Obp83e (Hekmat-Scafe et al., 2002, Hekmat-Scafe, 2002.3.5, Graham, 2002.6.18) OBP83e (Galindo and Smith, 2001) Obp83ef (Kopp et al., 2008, Vieira et al., 2007, Zhou et al., 2009) Obp83f (Graham, 2002.6.18, )
Name Synonym	Odorant-binding protein 83ef   Odorant-binding protein 83f (Galindo and Smith, 2001) Pseudogene 83e (Smith, 2002.1.14)
Secondary FlyBase IDs
	FBgn0037401 FBgn0051557
References ( 28 )
Generate a list of	All references relating to this gene ( 28 )
List References by type	Research paper  ( 10 ) Supplementary material  ( 3 ) Personal communication to FlyBase  ( 12 ) FlyBase analysis  ( 1 ) Curated genome annotation  ( 1 )
Recent research papers ( 1 )
	Vieira and Rozas, 2011, Genome Biol. Evol. 3: 476--490 Comparative Genomics of the Odorant-Binding and Chemosensory Protein Gene Families across the Arthropoda: Origin and Evolutionary History of the Chemosensory System. [FBrf0214323] Show all research papers ...