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Gene Dmel\CG30062

General Information
Symbol	Dmel\CG30062	Species	D. melanogaster
Name		Annotation symbol	CG30062
Feature type	protein_coding_gene	FlyBase ID	FBgn0050062
Gene Model Status	Current	Stock availability	2 publicly available
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	50A9-50A9	Sequence location	2R:9,333,205..9,333,814 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG30062 (FBgn0050062). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: lysozyme activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: cell wall macromolecule catabolic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Glycoside hydrolase, family 22; Glycoside hydrolase, family 22, conserved site; Glycoside hydrolase, family 22, lysozyme; Lysozyme-like domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed during late pupal stages. Summary of FlyAtlas Anatomical Expression Data: No expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1628508_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG30062. Gene sequence location is 2R:9333205..9333814.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN23422
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 50A9-50A9   Limits computationally determined from genome sequence between P{EP}DpEP358 and P{lacW}drkk13809&P{EP}mip120EP606
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG30062 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.41
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG30062-RB FBtr0303158  NM_165992   610   171
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG30062-PB   FBpp0292257   19.4   171   4.48     NP_725299   AAM68580
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Glycoside hydrolase, family 22, lysozyme (IPR000974) Glycoside hydrolase, family 22 (IPR001916) Lysozyme-like domain (IPR023346) Glycoside hydrolase, family 22, conserved site (IPR019799)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE013599 AAM68580   BT022609   BT022633   BT022662   BT022697
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	A1Z9D5
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0050062    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0050062 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed during late pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0050062 expression level Developmental Stage   Expression Level embryo 00-02hr    23 embryo 02-04hr    217 embryo 04-06hr    239 embryo 06-08hr    314 embryo 08-10hr    335 embryo 10-12hr    186 embryo 12-14hr    152 embryo 14-16hr    160 embryo 16-18hr    143 embryo 18-20hr    148 embryo 20-22hr    109 embryo 22-24hr    89 larva L1    87 larva L2    31 larva L3 12hr old    56 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    70 larva L3 puffstage 7-9    191 white prepupae new    157 white prepupae 12hr    233 white prepupae 24hr    218 pupae 2d postWPP    205 pupae 3d postWPP    718 pupae 4d postWPP    2114 adult male 01day    353 adult male 05day    194 adult male 30day    163 adult female 01day    320 adult female 05day    42 adult female 30day    59 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    23 embryo 02-04hr  (217) embryo 04-06hr  (239) embryo 06-08hr  (314) embryo 08-10hr  (335) embryo 10-12hr  (186) embryo 12-14hr  (152) embryo 14-16hr  (160) embryo 16-18hr  (143) embryo 18-20hr  (148) embryo 20-22hr  (109) embryo 22-24hr    89 larva L1    87 larva L2    31 larva L3 12hr old    56 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    70 larva L3 puffstage 7-9  (191) white prepupae new  (157) white prepupae 12hr  (233) white prepupae 24hr  (218) pupae 2d postWPP  (205) pupae 3d postWPP  (718) pupae 4d postWPP  (2114) adult male 01day  (353) adult male 05day  (194) adult male 30day  (163) adult female 01day  (320) adult female 05day    42 adult female 30day    59 Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    23 embryo 02-04hr    217 embryo 04-06hr    239 embryo 06-08hr    314 embryo 08-10hr    335 embryo 10-12hr    186 embryo 12-14hr    152 embryo 14-16hr    160 embryo 16-18hr    143 embryo 18-20hr    148 embryo 20-22hr    109 embryo 22-24hr    89 larva L1    87 larva L2    31 larva L3 12hr old    56 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    70 larva L3 puffstage 7-9    191 white prepupae new    157 white prepupae 12hr    233 white prepupae 24hr    218 pupae 2d postWPP    205 pupae 3d postWPP    718 pupae 4d postWPP  (2114) adult male 01day    353 adult male 05day    194 adult male 30day    163 adult female 01day    320 adult female 05day    42 adult female 30day    59 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    23 embryo 02-04hr    217 embryo 04-06hr    239 embryo 06-08hr    314 embryo 08-10hr    335 embryo 10-12hr    186 embryo 12-14hr    152 embryo 14-16hr    160 embryo 16-18hr    143 embryo 18-20hr    148 embryo 20-22hr    109 embryo 22-24hr    89 larva L1    87 larva L2    31 larva L3 12hr old    56 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    70 larva L3 puffstage 7-9    191 white prepupae new    157 white prepupae 12hr    233 white prepupae 24hr    218 pupae 2d postWPP    205 pupae 3d postWPP    718 pupae 4d postWPP    2114 adult male 01day    353 adult male 05day    194 adult male 30day    163 adult female 01day    320 adult female 05day    42 adult female 30day    59 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    23 embryo 02-04hr    217 embryo 04-06hr    239 embryo 06-08hr    314 embryo 08-10hr    335 embryo 10-12hr    186 embryo 12-14hr    152 embryo 14-16hr    160 embryo 16-18hr    143 embryo 18-20hr    148 embryo 20-22hr    109 embryo 22-24hr    89 larva L1    87 larva L2    31 larva L3 12hr old    56 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    70 larva L3 puffstage 7-9    191 white prepupae new    157 white prepupae 12hr    233 white prepupae 24hr    218 pupae 2d postWPP    205 pupae 3d postWPP    718 pupae 4d postWPP    2114 adult male 01day    353 adult male 05day    194 adult male 30day    163 adult female 01day    320 adult female 05day    42 adult female 30day    59 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0050062 expression level Developmental Stage   Expression Level embryo 00-02hr    23 embryo 02-04hr    217 embryo 04-06hr    239 embryo 06-08hr    314 embryo 08-10hr    335 embryo 10-12hr    186 embryo 12-14hr    152 embryo 14-16hr    160 embryo 16-18hr    143 embryo 18-20hr    148 embryo 20-22hr    109 embryo 22-24hr    89 larva L1    87 larva L2    31 larva L3 12hr old    56 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    70 larva L3 puffstage 7-9    191 white prepupae new    157 white prepupae 12hr    233 white prepupae 24hr    218 pupae 2d postWPP    205 pupae 3d postWPP    718 pupae 4d postWPP    2114 adult male 01day    353 adult male 05day    194 adult male 30day    163 adult female 01day    320 adult female 05day    42 adult female 30day    59 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    23 embryo 02-04hr  (217) embryo 04-06hr  (239) embryo 06-08hr  (314) embryo 08-10hr  (335) embryo 10-12hr  (186) embryo 12-14hr  (152) embryo 14-16hr  (160) embryo 16-18hr  143 embryo 18-20hr  (148) embryo 20-22hr  109 embryo 22-24hr    89 larva L1    87 larva L2    31 larva L3 12hr old    56 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    70 larva L3 puffstage 7-9  (191) white prepupae new  (157) white prepupae 12hr  (233) white prepupae 24hr  (218) pupae 2d postWPP  (205) pupae 3d postWPP  (718) pupae 4d postWPP  (2114) adult male 01day  (353) adult male 05day  (194) adult male 30day  (163) adult female 01day  (320) adult female 05day    42 adult female 30day    59 Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    23 embryo 02-04hr    217 embryo 04-06hr    239 embryo 06-08hr    314 embryo 08-10hr    335 embryo 10-12hr    186 embryo 12-14hr    152 embryo 14-16hr    160 embryo 16-18hr    143 embryo 18-20hr    148 embryo 20-22hr    109 embryo 22-24hr    89 larva L1    87 larva L2    31 larva L3 12hr old    56 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    70 larva L3 puffstage 7-9    191 white prepupae new    157 white prepupae 12hr    233 white prepupae 24hr    218 pupae 2d postWPP    205 pupae 3d postWPP    718 pupae 4d postWPP  2114 adult male 01day    353 adult male 05day    194 adult male 30day    163 adult female 01day    320 adult female 05day    42 adult female 30day    59 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    23 embryo 02-04hr    217 embryo 04-06hr    239 embryo 06-08hr    314 embryo 08-10hr    335 embryo 10-12hr    186 embryo 12-14hr    152 embryo 14-16hr    160 embryo 16-18hr    143 embryo 18-20hr    148 embryo 20-22hr    109 embryo 22-24hr    89 larva L1    87 larva L2    31 larva L3 12hr old    56 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    70 larva L3 puffstage 7-9    191 white prepupae new    157 white prepupae 12hr    233 white prepupae 24hr    218 pupae 2d postWPP    205 pupae 3d postWPP    718 pupae 4d postWPP    2114 adult male 01day    353 adult male 05day    194 adult male 30day    163 adult female 01day    320 adult female 05day    42 adult female 30day    59 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    23 embryo 02-04hr    217 embryo 04-06hr    239 embryo 06-08hr    314 embryo 08-10hr    335 embryo 10-12hr    186 embryo 12-14hr    152 embryo 14-16hr    160 embryo 16-18hr    143 embryo 18-20hr    148 embryo 20-22hr    109 embryo 22-24hr    89 larva L1    87 larva L2    31 larva L3 12hr old    56 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    70 larva L3 puffstage 7-9    191 white prepupae new    157 white prepupae 12hr    233 white prepupae 24hr    218 pupae 2d postWPP    205 pupae 3d postWPP    718 pupae 4d postWPP    2114 adult male 01day    353 adult male 05day    194 adult male 30day    163 adult female 01day    320 adult female 05day    42 adult female 30day    59 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0050062    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0050062 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: No expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0050062 expression level Tissue   Expression Level Larval Central Nervous System    2.25 Larval Midgut    1.8 Larval Hindgut    2.6 Larval Malpighian Tubules    3.1 Larval Fat Body    3.9 Larval Salivary Gland    4 Larval Trachea    5.325 Larval Carcass    3.15 Adult Head no informative data Adult Eye    8.35 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    2 Adult Crop    5.4 Adult Midgut    1.3 Adult Hindgut    4.1 Adult Malpighian Tubules    1.3 Adult Fat Body    4.4 Adult Salivary Gland    7.3 Adult Heart    3.5 Adult VirginFemale Spermatheca    2 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary    0.7 Adult Testis    1.9 Adult Male Accessory Gland    2.1 Adult Carcass no informative data Expression Level Scale  None   Low  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    2.25 Larval Midgut    1.8 Larval Hindgut    2.6 Larval Malpighian Tubules    3.1 Larval Fat Body    3.9 Larval Salivary Gland    4 Larval Trachea    5.325 Larval Carcass    3.15 Adult Head no informative data Adult Eye    8.35 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    2 Adult Crop    5.4 Adult Midgut    1.3 Adult Hindgut    4.1 Adult Malpighian Tubules    1.3 Adult Fat Body    4.4 Adult Salivary Gland    7.3 Adult Heart    3.5 Adult VirginFemale Spermatheca    2 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary    0.7 Adult Testis    1.9 Adult Male Accessory Gland    2.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    2.25 Larval Midgut    1.8 Larval Hindgut    2.6 Larval Malpighian Tubules    3.1 Larval Fat Body    3.9 Larval Salivary Gland    4 Larval Trachea    5.325 Larval Carcass    3.15 Adult Head no informative data Adult Eye    8.35 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    2 Adult Crop    5.4 Adult Midgut    1.3 Adult Hindgut    4.1 Adult Malpighian Tubules    1.3 Adult Fat Body    4.4 Adult Salivary Gland    7.3 Adult Heart    3.5 Adult VirginFemale Spermatheca    2 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary    0.7 Adult Testis    1.9 Adult Male Accessory Gland    2.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    2.25 Larval Midgut    1.8 Larval Hindgut    2.6 Larval Malpighian Tubules    3.1 Larval Fat Body    3.9 Larval Salivary Gland    4 Larval Trachea    5.325 Larval Carcass    3.15 Adult Head no informative data Adult Eye    8.35 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    2 Adult Crop    5.4 Adult Midgut    1.3 Adult Hindgut    4.1 Adult Malpighian Tubules    1.3 Adult Fat Body    4.4 Adult Salivary Gland    7.3 Adult Heart    3.5 Adult VirginFemale Spermatheca    2 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary    0.7 Adult Testis    1.9 Adult Male Accessory Gland    2.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0050062 expression level Tissue   Expression Level Larval Central Nervous System    2.25 Larval Midgut    1.8 Larval Hindgut    2.6 Larval Malpighian Tubules    3.1 Larval Fat Body    3.9 Larval Salivary Gland    4 Larval Trachea    5.325 Larval Carcass    3.15 Adult Head no informative data Adult Eye    8.35 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    2 Adult Crop    5.4 Adult Midgut    1.3 Adult Hindgut    4.1 Adult Malpighian Tubules    1.3 Adult Fat Body    4.4 Adult Salivary Gland    7.3 Adult Heart    3.5 Adult VirginFemale Spermatheca    2 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary    0.7 Adult Testis    1.9 Adult Male Accessory Gland    2.1 Adult Carcass no informative data Expression Level Scale  None   Low  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    2.25 Larval Midgut    1.8 Larval Hindgut    2.6 Larval Malpighian Tubules    3.1 Larval Fat Body    3.9 Larval Salivary Gland    4 Larval Trachea    5.325 Larval Carcass    3.15 Adult Head no informative data Adult Eye    8.35 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    2 Adult Crop    5.4 Adult Midgut    1.3 Adult Hindgut    4.1 Adult Malpighian Tubules    1.3 Adult Fat Body    4.4 Adult Salivary Gland    7.3 Adult Heart    3.5 Adult VirginFemale Spermatheca    2 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary    0.7 Adult Testis    1.9 Adult Male Accessory Gland    2.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    2.25 Larval Midgut    1.8 Larval Hindgut    2.6 Larval Malpighian Tubules    3.1 Larval Fat Body    3.9 Larval Salivary Gland    4 Larval Trachea    5.325 Larval Carcass    3.15 Adult Head no informative data Adult Eye    8.35 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    2 Adult Crop    5.4 Adult Midgut    1.3 Adult Hindgut    4.1 Adult Malpighian Tubules    1.3 Adult Fat Body    4.4 Adult Salivary Gland    7.3 Adult Heart    3.5 Adult VirginFemale Spermatheca    2 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary    0.7 Adult Testis    1.9 Adult Male Accessory Gland    2.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    2.25 Larval Midgut    1.8 Larval Hindgut    2.6 Larval Malpighian Tubules    3.1 Larval Fat Body    3.9 Larval Salivary Gland    4 Larval Trachea    5.325 Larval Carcass    3.15 Adult Head no informative data Adult Eye    8.35 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    2 Adult Crop    5.4 Adult Midgut    1.3 Adult Hindgut    4.1 Adult Malpighian Tubules    1.3 Adult Fat Body    4.4 Adult Salivary Gland    7.3 Adult Heart    3.5 Adult VirginFemale Spermatheca    2 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary    0.7 Adult Testis    1.9 Adult Male Accessory Gland    2.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head no informative data Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    no informative data   NA  Eye    8.35   NA  Brain    1.5   2.25  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    2   NA  Crop    5.4   1.8  Midgut    1.3   2.6  Hindgut    4.1   3.1  Malpighian Tubules    1.3   3.9  Fat Body    4.4   4  Salivary Gland    7.3   NA  Heart    3.5   5.325  Trachea    NA   NA  VirginFemale Spermatheca    2   NA  InseminatedFemale Spermatheca    4.1   NA  Ovary    0.7   NA  Testis    1.9   NA  Male Accessory Gland    2.1   3.15  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_24
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0050062 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG30062-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG30062GD5019 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG30062 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG30062 Class Mutagen Stocks Known lesion CG30062GD5019 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG30062KK103230 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD5019} NA P{KK103230} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term Evidence References
lysozyme activity inferred from sequence or structural similarity with LysP AND inferred from sequence or structural similarity with UniProtKB:Q7M437 (FlyBase Genome Annotators, 2002-2003)
Biological Process
CV term Evidence References
cell wall macromolecule catabolic process inferred from electronic annotation with InterPro:IPR000974 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG30062 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0050062 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 246428
Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs	Dpse\GA15617
Linkouts	OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0075634
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
VDRC	v105448 P{KK103230}VIE-260B v15433 w1118; P{GD5019}v15433
Genomic Clones ( 1 )
	BACR48I15 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 4 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	IP06881 IP06981 IP07081 IP07181
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0050062 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 246428
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	Gene expression is increased in response to the presence of either one or two copies of Scer\GAL4hs.PB. (Liu and Lehmann, 2008) New annotation (CG30062) in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_165992 RefSeq (Proteins) • NP_725299 DDBJ / EMBL / GenBank • AAM68580 Entrez Gene - A searchable database of RefSeq genes. • 246428 UniProtKB/TrEMBL • A1Z9D5
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Glycoside hydrolase, family 22, lysozyme (IPR000974) Glycoside hydrolase, family 22 (IPR001916) Lysozyme-like domain (IPR023346) Glycoside hydrolase, family 22, conserved site (IPR019799)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0050062 DRSC - Results from RNAi screens. • FBgn0050062 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0050062 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG30062-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0050062 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 246428 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 246428 modMine - Data generated by the modENCODE project. • FBgn0050062 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0075634
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG30062 (Waterhouse et al., 2007, Liu and Lehmann, 2008, Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
References ( 8 )
Research paper	Liu and Lehmann, 2008, Fly 2(2): 92--98 A genomic response to the yeast transcription factor GAL4 in Drosophila. [FBrf0205590] Waterhouse et al., 2007, Science 316(5832): 1738--1743 Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes. [FBrf0200242]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886]