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Gene Dmel\CG30428

General Information
Symbol	Dmel\CG30428	Species	D. melanogaster
Name		Annotation symbol	CG30428
Feature type	protein_coding_gene	FlyBase ID	FBgn0050428
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	60F5-60F5	Sequence location	2R:21,140,837..21,142,371 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG30428 (FBgn0050428). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult brain, larval Malpighian tubules, adult heart, larval fat body, larval salivary gland, larval trachea, inseminated spermatheca, adult testis. Comments on Affy2 ProbeSet: ProbeSet 1634124_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG30428. Gene sequence location is 2R:21140837..21142371.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	Sequence features BKN27243 HFA04041 BKN45714
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 60F5-60F5   Limits computationally determined from genome sequence between P{EP}CG2790EP412&P{EP}CG3776EP835 and P{EP}zipEP856&P{PZ}l(2)1048103263
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG30428 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG30428-RA FBtr0072451  NM_166709   1288   263
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG30428-PA   FBpp0072353   30.0   263   9.53     NP_726513   AAM68333
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE013599 AAM68333   BI639068   BP557699   BP559402   BT001900 AAN71689   CO177613   CO185019   CO267027   CO284260   CO295644   CO314055   CO314407   CO331128   CO332562   CO339670   CO341296   CZ478720   CZ478721   EC088173   EC212857   EC218440   EC221817   EC225742   EC228225   EC234123   EC245489   EC258264
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8IG86 Q8MLN2
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0050428    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0050428 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0050428 expression level Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    263 embryo 04-06hr    970 embryo 06-08hr    1073 embryo 08-10hr    1177 embryo 10-12hr    862 embryo 12-14hr    1247 embryo 14-16hr    252 embryo 16-18hr    542 embryo 18-20hr    336 embryo 20-22hr    300 embryo 22-24hr    418 larva L1    294 larva L2    403 larva L3 12hr old    284 larva L3 puffstage 1-2    400 larva L3 puffstage 3-6    605 larva L3 puffstage 7-9    863 white prepupae new    1079 white prepupae 12hr    885 white prepupae 24hr    942 pupae 2d postWPP    799 pupae 3d postWPP    581 pupae 4d postWPP    186 adult male 01day    509 adult male 05day    531 adult male 30day    241 adult female 01day    106 adult female 05day    163 adult female 30day    169 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr  (263) embryo 04-06hr  (970) embryo 06-08hr  (1073) embryo 08-10hr  (1177) embryo 10-12hr  (862) embryo 12-14hr  (1247) embryo 14-16hr  (252) embryo 16-18hr  (542) embryo 18-20hr  (336) embryo 20-22hr  (300) embryo 22-24hr  (418) larva L1  (294) larva L2  (403) larva L3 12hr old  (284) larva L3 puffstage 1-2  (400) larva L3 puffstage 3-6  (605) larva L3 puffstage 7-9  (863) white prepupae new  (1079) white prepupae 12hr  (885) white prepupae 24hr  (942) pupae 2d postWPP  (799) pupae 3d postWPP  (581) pupae 4d postWPP  (186) adult male 01day  (509) adult male 05day  (531) adult male 30day  (241) adult female 01day  106 adult female 05day  (163) adult female 30day  (169) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    263 embryo 04-06hr    970 embryo 06-08hr    1073 embryo 08-10hr    1177 embryo 10-12hr    862 embryo 12-14hr    1247 embryo 14-16hr    252 embryo 16-18hr    542 embryo 18-20hr    336 embryo 20-22hr    300 embryo 22-24hr    418 larva L1    294 larva L2    403 larva L3 12hr old    284 larva L3 puffstage 1-2    400 larva L3 puffstage 3-6    605 larva L3 puffstage 7-9    863 white prepupae new    1079 white prepupae 12hr    885 white prepupae 24hr    942 pupae 2d postWPP    799 pupae 3d postWPP    581 pupae 4d postWPP    186 adult male 01day    509 adult male 05day    531 adult male 30day    241 adult female 01day    106 adult female 05day    163 adult female 30day    169 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    263 embryo 04-06hr    970 embryo 06-08hr    1073 embryo 08-10hr    1177 embryo 10-12hr    862 embryo 12-14hr    1247 embryo 14-16hr    252 embryo 16-18hr    542 embryo 18-20hr    336 embryo 20-22hr    300 embryo 22-24hr    418 larva L1    294 larva L2    403 larva L3 12hr old    284 larva L3 puffstage 1-2    400 larva L3 puffstage 3-6    605 larva L3 puffstage 7-9    863 white prepupae new    1079 white prepupae 12hr    885 white prepupae 24hr    942 pupae 2d postWPP    799 pupae 3d postWPP    581 pupae 4d postWPP    186 adult male 01day    509 adult male 05day    531 adult male 30day    241 adult female 01day    106 adult female 05day    163 adult female 30day    169 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    263 embryo 04-06hr    970 embryo 06-08hr    1073 embryo 08-10hr    1177 embryo 10-12hr    862 embryo 12-14hr    1247 embryo 14-16hr    252 embryo 16-18hr    542 embryo 18-20hr    336 embryo 20-22hr    300 embryo 22-24hr    418 larva L1    294 larva L2    403 larva L3 12hr old    284 larva L3 puffstage 1-2    400 larva L3 puffstage 3-6    605 larva L3 puffstage 7-9    863 white prepupae new    1079 white prepupae 12hr    885 white prepupae 24hr    942 pupae 2d postWPP    799 pupae 3d postWPP    581 pupae 4d postWPP    186 adult male 01day    509 adult male 05day    531 adult male 30day    241 adult female 01day    106 adult female 05day    163 adult female 30day    169 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0050428 expression level Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    263 embryo 04-06hr    970 embryo 06-08hr    1073 embryo 08-10hr    1177 embryo 10-12hr    862 embryo 12-14hr    1247 embryo 14-16hr    252 embryo 16-18hr    542 embryo 18-20hr    336 embryo 20-22hr    300 embryo 22-24hr    418 larva L1    294 larva L2    403 larva L3 12hr old    284 larva L3 puffstage 1-2    400 larva L3 puffstage 3-6    605 larva L3 puffstage 7-9    863 white prepupae new    1079 white prepupae 12hr    885 white prepupae 24hr    942 pupae 2d postWPP    799 pupae 3d postWPP    581 pupae 4d postWPP    186 adult male 01day    509 adult male 05day    531 adult male 30day    241 adult female 01day    106 adult female 05day    163 adult female 30day    169 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr  (263) embryo 04-06hr  (970) embryo 06-08hr  (1073) embryo 08-10hr  (1177) embryo 10-12hr  (862) embryo 12-14hr  (1247) embryo 14-16hr  (252) embryo 16-18hr  (542) embryo 18-20hr  (336) embryo 20-22hr  (300) embryo 22-24hr  (418) larva L1  (294) larva L2  (403) larva L3 12hr old  (284) larva L3 puffstage 1-2  (400) larva L3 puffstage 3-6  (605) larva L3 puffstage 7-9  (863) white prepupae new  (1079) white prepupae 12hr  (885) white prepupae 24hr  (942) pupae 2d postWPP  (799) pupae 3d postWPP  (581) pupae 4d postWPP  (186) adult male 01day  (509) adult male 05day  (531) adult male 30day  (241) adult female 01day  106 adult female 05day  (163) adult female 30day  (169) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    263 embryo 04-06hr    970 embryo 06-08hr    1073 embryo 08-10hr    1177 embryo 10-12hr    862 embryo 12-14hr    1247 embryo 14-16hr    252 embryo 16-18hr    542 embryo 18-20hr    336 embryo 20-22hr    300 embryo 22-24hr    418 larva L1    294 larva L2    403 larva L3 12hr old    284 larva L3 puffstage 1-2    400 larva L3 puffstage 3-6    605 larva L3 puffstage 7-9    863 white prepupae new    1079 white prepupae 12hr    885 white prepupae 24hr    942 pupae 2d postWPP    799 pupae 3d postWPP    581 pupae 4d postWPP    186 adult male 01day    509 adult male 05day    531 adult male 30day    241 adult female 01day    106 adult female 05day    163 adult female 30day    169 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    263 embryo 04-06hr    970 embryo 06-08hr    1073 embryo 08-10hr    1177 embryo 10-12hr    862 embryo 12-14hr    1247 embryo 14-16hr    252 embryo 16-18hr    542 embryo 18-20hr    336 embryo 20-22hr    300 embryo 22-24hr    418 larva L1    294 larva L2    403 larva L3 12hr old    284 larva L3 puffstage 1-2    400 larva L3 puffstage 3-6    605 larva L3 puffstage 7-9    863 white prepupae new    1079 white prepupae 12hr    885 white prepupae 24hr    942 pupae 2d postWPP    799 pupae 3d postWPP    581 pupae 4d postWPP    186 adult male 01day    509 adult male 05day    531 adult male 30day    241 adult female 01day    106 adult female 05day    163 adult female 30day    169 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    263 embryo 04-06hr    970 embryo 06-08hr    1073 embryo 08-10hr    1177 embryo 10-12hr    862 embryo 12-14hr    1247 embryo 14-16hr    252 embryo 16-18hr    542 embryo 18-20hr    336 embryo 20-22hr    300 embryo 22-24hr    418 larva L1    294 larva L2    403 larva L3 12hr old    284 larva L3 puffstage 1-2    400 larva L3 puffstage 3-6    605 larva L3 puffstage 7-9    863 white prepupae new    1079 white prepupae 12hr    885 white prepupae 24hr    942 pupae 2d postWPP    799 pupae 3d postWPP    581 pupae 4d postWPP    186 adult male 01day    509 adult male 05day    531 adult male 30day    241 adult female 01day    106 adult female 05day    163 adult female 30day    169 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0050428    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0050428 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult brain, larval Malpighian tubules, adult heart, larval fat body, larval salivary gland, larval trachea, inseminated spermatheca, adult testis. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0050428 expression level Tissue   Expression Level Larval Central Nervous System    84.075 Larval Midgut    97.3 Larval Hindgut    92.2 Larval Malpighian Tubules    141.1 Larval Fat Body    223.1 Larval Salivary Gland    104.4 Larval Trachea    134.55 Larval Carcass    84.2 Adult Head    59.5 Adult Eye    90.975 Adult Brain    157.1 Adult Thoracic-Abdominal Ganglion    94.1 Adult Crop    97.8 Adult Midgut    97.9 Adult Hindgut    67.7 Adult Malpighian Tubules    76.2 Adult Fat Body    98.1 Adult Salivary Gland    63.4 Adult Heart    115.525 Adult VirginFemale Spermatheca    89 Adult InseminatedFemale Spermatheca    105.8 Adult Ovary    12.8 Adult Testis    268.4 Adult Male Accessory Gland    68.8 Adult Carcass    56.9 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    84.075 Larval Midgut    97.3 Larval Hindgut    92.2 Larval Malpighian Tubules    141.1 Larval Fat Body    223.1 Larval Salivary Gland    104.4 Larval Trachea    134.55 Larval Carcass    84.2 Adult Head    59.5 Adult Eye    90.975 Adult Brain    157.1 Adult Thoracic-Abdominal Ganglion    94.1 Adult Crop    97.8 Adult Midgut    97.9 Adult Hindgut    67.7 Adult Malpighian Tubules    76.2 Adult Fat Body    98.1 Adult Salivary Gland    63.4 Adult Heart    115.525 Adult VirginFemale Spermatheca    89 Adult InseminatedFemale Spermatheca    105.8 Adult Ovary    12.8 Adult Testis    268.4 Adult Male Accessory Gland    68.8 Adult Carcass    56.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    84.075 Larval Midgut    97.3 Larval Hindgut    92.2 Larval Malpighian Tubules    141.1 Larval Fat Body    223.1 Larval Salivary Gland    104.4 Larval Trachea    134.55 Larval Carcass    84.2 Adult Head    59.5 Adult Eye    90.975 Adult Brain    157.1 Adult Thoracic-Abdominal Ganglion    94.1 Adult Crop    97.8 Adult Midgut    97.9 Adult Hindgut    67.7 Adult Malpighian Tubules    76.2 Adult Fat Body    98.1 Adult Salivary Gland    63.4 Adult Heart    115.525 Adult VirginFemale Spermatheca    89 Adult InseminatedFemale Spermatheca    105.8 Adult Ovary    12.8 Adult Testis    268.4 Adult Male Accessory Gland    68.8 Adult Carcass    56.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    84.075 Larval Midgut    97.3 Larval Hindgut    92.2 Larval Malpighian Tubules    141.1 Larval Fat Body    223.1 Larval Salivary Gland    104.4 Larval Trachea    134.55 Larval Carcass    84.2 Adult Head    59.5 Adult Eye    90.975 Adult Brain    157.1 Adult Thoracic-Abdominal Ganglion    94.1 Adult Crop    97.8 Adult Midgut    97.9 Adult Hindgut    67.7 Adult Malpighian Tubules    76.2 Adult Fat Body    98.1 Adult Salivary Gland    63.4 Adult Heart    115.525 Adult VirginFemale Spermatheca    89 Adult InseminatedFemale Spermatheca    105.8 Adult Ovary    12.8 Adult Testis    268.4 Adult Male Accessory Gland    68.8 Adult Carcass    56.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0050428 expression level Tissue   Expression Level Larval Central Nervous System    84.075 Larval Midgut    97.3 Larval Hindgut    92.2 Larval Malpighian Tubules    141.1 Larval Fat Body    223.1 Larval Salivary Gland    104.4 Larval Trachea    134.55 Larval Carcass    84.2 Adult Head    59.5 Adult Eye    90.975 Adult Brain    157.1 Adult Thoracic-Abdominal Ganglion    94.1 Adult Crop    97.8 Adult Midgut    97.9 Adult Hindgut    67.7 Adult Malpighian Tubules    76.2 Adult Fat Body    98.1 Adult Salivary Gland    63.4 Adult Heart    115.525 Adult VirginFemale Spermatheca    89 Adult InseminatedFemale Spermatheca    105.8 Adult Ovary    12.8 Adult Testis    268.4 Adult Male Accessory Gland    68.8 Adult Carcass    56.9 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    84.075 Larval Midgut    97.3 Larval Hindgut    92.2 Larval Malpighian Tubules    141.1 Larval Fat Body    223.1 Larval Salivary Gland    104.4 Larval Trachea    134.55 Larval Carcass    84.2 Adult Head    59.5 Adult Eye    90.975 Adult Brain    157.1 Adult Thoracic-Abdominal Ganglion    94.1 Adult Crop    97.8 Adult Midgut    97.9 Adult Hindgut    67.7 Adult Malpighian Tubules    76.2 Adult Fat Body    98.1 Adult Salivary Gland    63.4 Adult Heart    115.525 Adult VirginFemale Spermatheca    89 Adult InseminatedFemale Spermatheca    105.8 Adult Ovary    12.8 Adult Testis    268.4 Adult Male Accessory Gland    68.8 Adult Carcass    56.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    84.075 Larval Midgut    97.3 Larval Hindgut    92.2 Larval Malpighian Tubules    141.1 Larval Fat Body    223.1 Larval Salivary Gland    104.4 Larval Trachea    134.55 Larval Carcass    84.2 Adult Head    59.5 Adult Eye    90.975 Adult Brain    157.1 Adult Thoracic-Abdominal Ganglion    94.1 Adult Crop    97.8 Adult Midgut    97.9 Adult Hindgut    67.7 Adult Malpighian Tubules    76.2 Adult Fat Body    98.1 Adult Salivary Gland    63.4 Adult Heart    115.525 Adult VirginFemale Spermatheca    89 Adult InseminatedFemale Spermatheca    105.8 Adult Ovary    12.8 Adult Testis    268.4 Adult Male Accessory Gland    68.8 Adult Carcass    56.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    84.075 Larval Midgut    97.3 Larval Hindgut    92.2 Larval Malpighian Tubules    141.1 Larval Fat Body    223.1 Larval Salivary Gland    104.4 Larval Trachea    134.55 Larval Carcass    84.2 Adult Head    59.5 Adult Eye    90.975 Adult Brain    157.1 Adult Thoracic-Abdominal Ganglion    94.1 Adult Crop    97.8 Adult Midgut    97.9 Adult Hindgut    67.7 Adult Malpighian Tubules    76.2 Adult Fat Body    98.1 Adult Salivary Gland    63.4 Adult Heart    115.525 Adult VirginFemale Spermatheca    89 Adult InseminatedFemale Spermatheca    105.8 Adult Ovary    12.8 Adult Testis    268.4 Adult Male Accessory Gland    68.8 Adult Carcass    56.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    59.5   NA  Eye    90.975   NA  Brain    157.1   84.075  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    94.1   NA  Crop    97.8   97.3  Midgut    97.9   92.2  Hindgut    67.7   141.1  Malpighian Tubules    76.2   223.1  Fat Body    98.1   104.4  Salivary Gland    63.4   NA  Heart    115.525   134.55  Trachea    NA   NA  VirginFemale Spermatheca    89   NA  InseminatedFemale Spermatheca    105.8   NA  Ovary    12.8   NA  Testis    268.4   NA  Male Accessory Gland    68.8   84.2  Carcass    56.9 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_11
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0050428 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG30428-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG30428GD11124 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG30428 Class Mutagen Stocks Known lesion CG30428e00885 piggyBac transposase 1 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG30428 Class Mutagen Stocks Known lesion CG30428GD11124 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG30428KK107243 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD11124} NA P{KK107243} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{RB}CG30428e00885 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG30428 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 73162 DroID - A comprehensive database of gene and protein interactions. • FBgn0050428 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 246608
Orthologs
Genome-wide drosophilid orthologs	Dana\GF13363 Dere\GG23039 Dgri\GH22659 Dmoj\GI21172 Dper\GL17651 Dpse\GA15840 Dsec\GM11929 Dsim\GD11923 Dvir\GJ21029 Dwil\GK21578 Dyak\GE14469
Curated drosophilid orthologs	Dpse\GA15840
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL015047-PA Aedes aegypti (mosquito) XP_001947279.1 Acyrthosiphon pisum (pea aphid) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV31293 NV25089 NV20258 ISCW003458 FBgn0232074 FBgn0223570 FBgn0208164 FBgn0183662 FBgn0166870 FBgn0247665 FBgn0075856 FBgn0155254 FBgn0143903 FBgn0130117 FBgn0115196 FBgn0090395 BGIBMGA012010 BGIBMGA009390 BGIBMGA001366 ACYPI50873 ACYPI43243 ACYPI38802 AGAP006815 AGAP001331 AAEL002264
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Harvard	- PBac{RB}CG30428e00885
VDRC	v100243 P{KK107243}VIE-260B v24774 w1118; P{GD11124}v24774
Genomic Clones ( 1 )
	BACR02G15 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 23 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	SD21514
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones	34066 45529 46545 77720 107883 108153 214573.55 277244 CK01.66B.E11 EC29148 EK053918 EK148422 EK165619 EK211153 EK234810 EK236037 EK298340 EK303910 EP02509 EP12214 FGM310G02 FGM320G02
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0050428 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 246608
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG30428 BcDNA:SD21514 (FlyBase, 1996-)
Additional comments	Source for merge of CG30428 BcDNA:SD21514 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
	New annotation (CG30428) in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_166709 RefSeq (Proteins) • NP_726513 DDBJ / EMBL / GenBank • AAM68333 AAM68333.1 AAN71689 BI639068 BT001900 CZ478720 CZ478721 Entrez Gene - A searchable database of RefSeq genes. • 246608 UniProtKB/TrEMBL • Q8IG86 Q8MLN2
Other Crossreferences
Linkouts
	BioGRID - A database of protein and genetic interactions • 73162 DroID - A comprehensive database of gene and protein interactions. • FBgn0050428 DRSC - Results from RNAi screens. • FBgn0050428 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0050428 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG30428-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0050428 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 246608 InParanoid A subset of ortholog calls from InParanoid. • AAEL015047-PA Aedes aegypti (mosquito) XP_001947279.1 Acyrthosiphon pisum (pea aphid) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 246608 modMine - Data generated by the modENCODE project. • FBgn0050428 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV31293 NV25089 NV20258 ISCW003458 FBgn0232074 FBgn0223570 FBgn0208164 FBgn0183662 FBgn0166870 FBgn0247665 FBgn0075856 FBgn0155254 FBgn0143903 FBgn0130117 FBgn0115196 FBgn0090395 BGIBMGA012010 BGIBMGA009390 BGIBMGA001366 ACYPI50873 ACYPI43243 ACYPI38802 AGAP006815 AGAP001331 AAEL002264
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	BcDNA:SD21514   CG30428 (Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
	FBgn0064772
References ( 11 )
Research paper	Danzer and Wallrath, 2004, Development 131(15): 3571--3580 Mechanisms of HP1-mediated gene silencing in Drosophila. [FBrf0179179]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
FlyBase analysis	FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]