FlyBase Gene Report: Dmel\CG31121

General Information

Symbol

Dmel\CG31121

Species

D. melanogaster

Name

Annotation Symbol

CG31121

Feature Type

protein_coding_gene

FlyBase ID

FBgn0051121

Gene Model Status

Current

Stock Availability

7 publicly available

Gene Snapshot

Contributions welcome

Other Summaries

Alliance
Auto summary
Gene Group
Interactive Fly

Key Links

Genomic Location

Cytogenetic map

96B2-96B4

Sequence location

3R:24,881,466..24,894,605 [-]

Recombination map

3-86

RefSeq locus

NT_033777 REGION:24881466..24894605

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse GBrowse

Help me choose

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

GO Summary Ribbons

Gene Ontology (GO) Annotations (5 terms)

Molecular Function (3 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

enables ATP binding

inferred from electronic annotation with InterPro:IPR003439

(assigned by InterPro )

(FlyBase Curators et al., 2004-)

enables ATPase activity

inferred from electronic annotation with InterPro:IPR003439

(assigned by InterPro )

(FlyBase Curators et al., 2004-)

enables ATPase-coupled transmembrane transporter activity

inferred from biological aspect of ancestor with PANTHER:PTN000443718

(assigned by GO_Central )

(Gaudet et al., 2011)

Biological Process (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

involved_in transmembrane transport

inferred from biological aspect of ancestor with PANTHER:PTN000443718

(assigned by GO_Central )

(Gaudet et al., 2011)

Cellular Component (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

located_in plasma membrane

inferred from biological aspect of ancestor with PANTHER:PTN000443718

(assigned by GO_Central )

(Gaudet et al., 2011)

Gene Group (FlyBase)

ABCG ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY

Protein Family (UniProt)

Protein Signatures (InterPro)

Summaries

Gene Group (FlyBase)

ABCG ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY -: The ATP-binding cassette (ABC) transporter family are primary active transporters that use ATP hydrolysis to drive the transport of substrates across the membrane. In metazoans the ABCG subfamily are half transporters. Half transporters must dimerize to form a functional transporter. (Adapted from FBrf0224053).

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\CG31121 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Comments on Gene Model

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.47

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

CG31121-RA

FBtr0084723

NM_170179

3296

911

CG31121-RB

FBtr0084724

NM_170180

3136

911

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

CG31121-PA

FBpp0084098

99.7

911

8.13

NP_733058

AAF56359

CG31121-PB

FBpp0084099

99.7

911

8.13

NP_733059

AAF56360

Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

911 aa isoforms: CG31121-PA, CG31121-PB

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\CG31121 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Linkouts

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 7 -- 8

hindgut anlage

(Fisher et al., 2012)

embryonic stage 9 -- 10

dorsal ectoderm

(Fisher et al., 2012)

foregut primordium

(Fisher et al., 2012)

inclusive hindgut primordium

(Fisher et al., 2012)

embryonic stage 11 -- 12

clypeo-labral primordium

(Fisher et al., 2012)

dorsal epidermis primordium

(Fisher et al., 2012)

foregut primordium

(Fisher et al., 2012)

hindgut proper primordium

(Fisher et al., 2012)

Malpighian tubule main body primordium

(Fisher et al., 2012)

tracheal primordium

(Fisher et al., 2012)

ventral epidermis primordium

(Fisher et al., 2012)

embryonic stage 13 -- 16

embryonic dorsal epidermis

(Fisher et al., 2012)

embryonic epipharynx

(Fisher et al., 2012)

embryonic foregut

(Fisher et al., 2012)

embryonic hindgut

(Fisher et al., 2012)

embryonic hypopharynx

(Fisher et al., 2012)

embryonic ventral epidermis

(Fisher et al., 2012)

sensory nervous system primordium

(Fisher et al., 2012)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\CG31121 in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\CG31121

View exonic expression by tissue for Dmel\CG31121

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0051121

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0051121

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG31121-RA

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG31121

Flygut - An atlas of the Drosophila adult midgut

FBgn0051121

Images

FlyExpress - Embryonic expression images (BDGP data)

Show all FlyExpress processed images for Dmel\CG31121

Stages(s) 4-6
Stages(s) 9-10
Stages(s) 11-12
Stages(s) 13-16

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 7 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 2 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of CG31121

Transgenic constructs containing regulatory region of CG31121

Aberrations (Deficiencies and Duplications) ( 1 )

Inferred from experimentation

Gene disrupted in

Df(3R)Exel6200

(Ryder, 2004.4.26)

Inferred from location

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

partially lethal, with Scer\GAL4^Mef2.PR

CG31121^GD255

viable

CG31121^d06890

viable, with Scer\GAL4^pnr-MD237

CG31121^GD255

Sterility

Allele

fertile

CG31121^d06890

Phenotype manifest in

Allele

Orthologs

Downloads

Download All DIOPT Orthologs

Download All OrthoDB Orthologs

Human Orthologs (via DIOPT v8.0)

Homo sapiens (Human) (17)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\ABCG8

4 of 15

Yes

3 of 15

3 of 15

3 of 15

2 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Model Organism Orthologs (via DIOPT v8.0)

Mus musculus (laboratory mouse) (22)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Abcg8

4 of 15

Yes

3 of 15

3 of 15

3 of 15

2 of 15

2 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Rattus norvegicus (Norway rat) (21)

Rnor\Abcg1

3 of 13

Yes

Rnor\Abcg2

3 of 13

Yes

Rnor\Abcg3l1

3 of 13

Yes

Rnor\Abcg5

3 of 13

Yes

Rnor\Abcg8

3 of 13

Yes

2 of 13

2 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Xenopus tropicalis (Western clawed frog) (11)

Xtro\abcg8

4 of 12

Yes

3 of 12

3 of 12

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

Danio rerio (Zebrafish) (15)

Drer\abcg8

4 of 15

Yes

3 of 15

3 of 15

3 of 15

3 of 15

3 of 15

2 of 15

2 of 15

2 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Caenorhabditis elegans (Nematode, roundworm) (17)

Cele\abcx-1

9 of 15

Yes

3 of 15

3 of 15

3 of 15

2 of 15

2 of 15

2 of 15

2 of 15

2 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Arabidopsis thaliana (thale-cress) (24)

Atha\ABCG1

2 of 9

Yes

Atha\ABCG2

2 of 9

Yes

Atha\ABCG4

2 of 9

Yes

Atha\ABCG5

2 of 9

Yes

Atha\ABCG6

2 of 9

Yes

Atha\ABCG8

2 of 9

Yes

Atha\ABCG9

2 of 9

Yes

Atha\ABCG10

2 of 9

Yes

Atha\ABCG14

2 of 9

Yes

Atha\ABCG16

2 of 9

Yes

Atha\ABCG17

2 of 9

Yes

Atha\ABCG18

2 of 9

Yes

Atha\ABCG19

2 of 9

Yes

Atha\ABCG20

2 of 9

Yes

Atha\ABCG21

2 of 9

Yes

Atha\ABCG22

2 of 9

Yes

Atha\ABCG23

2 of 9

Yes

Atha\ABCG24

2 of 9

Yes

Atha\ABCG25

2 of 9

Yes

Atha\ABCG26

2 of 9

Yes

Atha\ABCG27

2 of 9

Yes

Atha\ABCG28

2 of 9

Yes

Atha\NAP12

2 of 9

Yes

Atha\ABCG7

1 of 9

Saccharomyces cerevisiae (Brewer's yeast) (10)

Scer\ADP1

3 of 15

Yes

Scer\YOL075C

3 of 15

Yes

2 of 15

2 of 15

2 of 15

2 of 15

2 of 15

2 of 15

2 of 15

2 of 15

Schizosaccharomyces pombe (Fission yeast) (0)

No records found.

Ortholog(s) in Drosophila Species (via OrthoDB v9.1) ( EOG09190318 )

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila suzukii

Spotted wing Drosophila

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA16025

Drosophila persimilis

Dper\GL23078

Drosophila willistoni

Dwil\GK14275

Drosophila virilis

Dvir\GJ10456

Drosophila mojavensis

Dmoj\GI23153

Drosophila grimshawi

Dgri\GH14262

Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG0915009L )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Musca domestica

House fly

Mdoa\17020090

Glossina morsitans

Tsetse fly

Gmor\GMOY010089

Lucilia cuprina

Australian sheep blowfly

Lcup\FF38_02771

Mayetiola destructor

Hessian fly

Mdes\Mdes009284

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL011265

Anopheles darlingi

American malaria mosquito

Adar\ADAC002096

Anopheles gambiae

Malaria mosquito

Agam\AGAP002050

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ005341

Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W03GA )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Bombyx mori

Silkmoth

Bmor\BGIBMGA000220

Danaus plexippus

Monarch butterfly

Dple\DPOGS210111-PA

Heliconius melpomene

Postman butterfly

Hmel\HMEL005061

Apis florea

Little honeybee

Aflo\2651923076

Apis florea

Little honeybee

Aflo\2175074084

Apis mellifera

Western honey bee

Amel\GB49999

Apis mellifera

Western honey bee

Amel\LOC413844

Apis mellifera

Western honey bee

Amel\LOC726495

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP14964

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP22358

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP14963

Bombus terrestris

Buff-tailed bumblebee

Bter\15205533

Bombus terrestris

Buff-tailed bumblebee

Bter\15208059

Bombus terrestris

Buff-tailed bumblebee

Bter\15205534

Linepithema humile

Argentine ant

Lhum\LH20523

Linepithema humile

Argentine ant

Lhum\LH11147

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:0020af

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:002782

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG000329

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG006796

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG002293

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG006798

Dendroctonus ponderosae

Mountain pine beetle

Dpod\YQE_08501

Tribolium castaneum

Red flour beetle

Tcas\TC011713

Tribolium castaneum

Red flour beetle

Tcas\TC014392

Pediculus humanus

Human body louse

Phum\PHUM576380

Pediculus humanus

Human body louse

Phum\PHUM576390

Rhodnius prolixus

Kissing bug

Rpro\RPRC011481

Cimex lectularius

Bed bug

Clec\CLEC004631

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI007763

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_13555

Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X01B1 )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strigamia maritima

European centipede

Smar\SMAR010343

Ixodes scapularis

Black-legged tick

Isca\ISCW018080

Ixodes scapularis

Black-legged tick

Isca\ISCW024097

Ixodes scapularis

Black-legged tick

Isca\ISCW017967

Ixodes scapularis

Black-legged tick

Isca\ISCW002921

Ixodes scapularis

Black-legged tick

Isca\ISCW017970

Stegodyphus mimosarum

African social velvet spider

Smim\KFM74661.1

Tetranychus urticae

Two-spotted spider mite

Turt\tetur01g16280

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_258299

Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G021J )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_013585gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_027185gn

Ciona intestinalis

Vase tunicate

Cint\ENSCING00000001057

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v8.0)

Drosophila melanogaster (Fruit fly) (28)

Gene Symbol

Score

Source

Alignment

4 of 10

4 of 10

4 of 10

4 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

E23

3 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

osy

1 of 10

snu

1 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 2 )

Human Ortholog

Disease

Evidence

References

ABCG8; ATP binding cassette subfamily G member 8

model of sitosterolemia

IEA

(FlyBase, 2019-)

model of gallbladder disease

IEA

(FlyBase, 2019-)

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

ABCG8; ATP binding cassette subfamily G member 8

4 of 15

605460

ABCG1; ATP binding cassette subfamily G member 1

3 of 15

603076

ABCG2; ATP binding cassette subfamily G member 2 (Junior blood group)

3 of 15

603756

ABCG5; ATP binding cassette subfamily G member 5

3 of 15

605459

SITOSTEROLEMIA 2; STSL2

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

RNA-RNA

Physical Interaction

Assay

References

CG31121 - mir-1

luminiscence technology

(Easow et al., 2007)

Summary of Genetic Interactions

esyN Network Diagram

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

67898

DroID - A comprehensive database of gene and protein interactions.

FBgn0051121

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

42975

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

External Data

Linkouts

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

3-86

Cytogenetic map

96B2-96B4

Sequence location

3R:24,881,466..24,894,605 [-]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

96B2-96B4

Limits computationally determined from genome sequence between P{EP}CycB3^EP3127 and P{PZ}ssh⁰¹²⁰⁷

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

3-86

(FlyBase, 2016)

3-85.1

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (7)

Bloomington

19254

w¹¹¹⁸; P{XP}CG31121^d06890

23749

y¹ w^67c23; Mi{ET1}CG31121^MB01633

19061

w¹¹¹⁸; PBac{WH}CG31121^f07249/TM6B, Tb¹

43907

y¹ w^*; Mi{MIC}CG31121^MI07632/TM3, Sb¹ Ser¹

91472

y¹ w^*; TI{CRIMIC.TG4.2}CG31121^{CR02203-TG4.2}/TM3, Sb¹ Ser¹

VDRC

v100046

P{KK103161}VIE-260B

v43981

w¹¹¹⁸; P{GD255}v43981

Genomic Clones (17)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (29)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

Other clones

FI03229

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0051121

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0051121

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

42975

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for database merge of

Source for merge of: CG18655 CG11764

(FlyBase, 1996-)

Source for merge of: CG18633 CG18655

(FlyBase Genome Annotators, 2002-2003)

Source for merge of: CG31121 BcDNA:GH19411

(FlyBase, 1996-)

Additional comments

Annotations CG18633 and CG18655 merged as CG31121 in release 3 of the genome annotation.

(FlyBase Genome Annotators, 2002-2003)

Source for merge of CG18655 CG11764 was sequence comparison ( date:001104 ).

(FlyBase, 1996-)

Source for merge of CG31121 BcDNA:GH19411 was a shared cDNA ( date:030728 ).

(FlyBase, 1996-)

Other Comments

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 39 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

42975

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0051121

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0051121

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG31121

Flygut - An atlas of the Drosophila adult midgut

FBgn0051121

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

42975

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC011713

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG31121

modMine - A data warehouse for the modENCODE project

FBgn0051121

Linkouts

BioGRID - A database of protein and genetic interactions.

67898

DroID - A comprehensive database of gene and protein interactions.

FBgn0051121

DRSC - Results frm RNAi screens

FBgn0051121

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0051121

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG31121-RA

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0051121

FlyMine - An integrated database for Drosophila genomics

FBgn0051121

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

42975

Synonyms and Secondary IDs (6)

Reported As

Symbol Synonym

BcDNA:GH19411

CG11764

CG18633

(Dean et al., 2001)

CG18655

CG31121

(Gene Disruption Project members, 2018-, Dermauw and Van Leeuwen, 2014, Paulsen et al., 2013, Chung et al., 2011, Keleman et al., 2009.8.5, Quijano et al., 2008, Easow et al., 2007)

DmCG31121

(He et al., 2019)

Name Synonyms

Secondary FlyBase IDs

FBgn0039242
FBgn0039243
FBgn0042211
FBgn0063237

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

References (39)

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