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Gene Dmel\CG31126

General Information
Symbol	Dmel\CG31126	Species	D. melanogaster
Name		Annotation symbol	CG31126
Feature type	protein_coding_gene	FlyBase ID	FBgn0051126
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	96A14-96A14	Sequence location	3R:20,485,343..20,485,987 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG31126 (FBgn0051126). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: BolA protein. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed during early larval stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult testis, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1636684_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG31126. Gene sequence location is 3R:20485343..20485987.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10	Controlled Vocabulary Terms day 42 of adulthood day 41 of adulthood day 30 of adulthood day 49 of adulthood day 17 of adulthood day 45 of adulthood day 8 of adulthood day 26 of adulthood day 21 of adulthood day 13 of adulthood day 25 of adulthood day 20 of adulthood day 22 of adulthood day 39 of adulthood day 7 of adulthood day 36 of adulthood day 11 of adulthood day 37 of adulthood day 27 of adulthood day 18 of adulthood day 19 of adulthood day 28 of adulthood day 9 of adulthood day 29 of adulthood adult heart day 40 of adulthood day 16 of adulthood day 24 of adulthood day 15 of adulthood day 33 of adulthood day 43 of adulthood day 47 of adulthood day 38 of adulthood day 32 of adulthood day 48 of adulthood day 23 of adulthood day 35 of adulthood day 12 of adulthood day 10 of adulthood day 31 of adulthood day 34 of adulthood day 44 of adulthood day 14 of adulthood day 46 of adulthood
FB2012_01	Sequence features BKN29312 HFA14623
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 96A14-96A14   Limits computationally determined from genome sequence between P{PZ}crb07207&P{PZ}BRWD305842 and P{EP}CycB3EP3127
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG31126 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG31126-RA FBtr0084663  NM_170162   589   150
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG31126-PA   FBpp0084043   17.0   150   9.92     NP_733027   AAF56322
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • BolA protein (IPR002634)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF56322   BF492926   BT023619   BT099577   CO296906   CO310111   CO319426   EC065993   EC213377   EC224837   EL875745   EL876020   EL876021
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VC53
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0051126    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0051126 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed during early larval stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0051126 expression level Developmental Stage   Expression Level embryo 00-02hr    2986 embryo 02-04hr    1818 embryo 04-06hr    2322 embryo 06-08hr    2212 embryo 08-10hr    2474 embryo 10-12hr    3665 embryo 12-14hr    2867 embryo 14-16hr    2909 embryo 16-18hr    2859 embryo 18-20hr    2429 embryo 20-22hr    2242 embryo 22-24hr    2295 larva L1    4133 larva L2    4924 larva L3 12hr old    3286 larva L3 puffstage 1-2    1074 larva L3 puffstage 3-6    1346 larva L3 puffstage 7-9    1421 white prepupae new    1631 white prepupae 12hr    1486 white prepupae 24hr    1559 pupae 2d postWPP    2762 pupae 3d postWPP    3525 pupae 4d postWPP    1901 adult male 01day    2547 adult male 05day    2431 adult male 30day    2249 adult female 01day    2393 adult female 05day    2552 adult female 30day    2967 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (2986) embryo 02-04hr  (1818) embryo 04-06hr  (2322) embryo 06-08hr  (2212) embryo 08-10hr  (2474) embryo 10-12hr  (3665) embryo 12-14hr  (2867) embryo 14-16hr  (2909) embryo 16-18hr  (2859) embryo 18-20hr  (2429) embryo 20-22hr  (2242) embryo 22-24hr  (2295) larva L1  (4133) larva L2  (4924) larva L3 12hr old  (3286) larva L3 puffstage 1-2  (1074) larva L3 puffstage 3-6  (1346) larva L3 puffstage 7-9  (1421) white prepupae new  (1631) white prepupae 12hr  (1486) white prepupae 24hr  (1559) pupae 2d postWPP  (2762) pupae 3d postWPP  (3525) pupae 4d postWPP  (1901) adult male 01day  (2547) adult male 05day  (2431) adult male 30day  (2249) adult female 01day  (2393) adult female 05day  (2552) adult female 30day  (2967) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (2986) embryo 02-04hr  (1818) embryo 04-06hr  (2322) embryo 06-08hr  (2212) embryo 08-10hr  (2474) embryo 10-12hr  (3665) embryo 12-14hr  (2867) embryo 14-16hr  (2909) embryo 16-18hr  (2859) embryo 18-20hr  (2429) embryo 20-22hr  (2242) embryo 22-24hr  (2295) larva L1  (4133) larva L2  (4924) larva L3 12hr old  (3286) larva L3 puffstage 1-2    1074 larva L3 puffstage 3-6    1346 larva L3 puffstage 7-9  1421 white prepupae new  (1631) white prepupae 12hr  1486 white prepupae 24hr  (1559) pupae 2d postWPP  (2762) pupae 3d postWPP  (3525) pupae 4d postWPP  (1901) adult male 01day  (2547) adult male 05day  (2431) adult male 30day  (2249) adult female 01day  (2393) adult female 05day  (2552) adult female 30day  (2967) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    2986 embryo 02-04hr    1818 embryo 04-06hr    2322 embryo 06-08hr    2212 embryo 08-10hr    2474 embryo 10-12hr    3665 embryo 12-14hr    2867 embryo 14-16hr    2909 embryo 16-18hr    2859 embryo 18-20hr    2429 embryo 20-22hr    2242 embryo 22-24hr    2295 larva L1    4133 larva L2    4924 larva L3 12hr old    3286 larva L3 puffstage 1-2    1074 larva L3 puffstage 3-6    1346 larva L3 puffstage 7-9    1421 white prepupae new    1631 white prepupae 12hr    1486 white prepupae 24hr    1559 pupae 2d postWPP    2762 pupae 3d postWPP    3525 pupae 4d postWPP    1901 adult male 01day    2547 adult male 05day    2431 adult male 30day    2249 adult female 01day    2393 adult female 05day    2552 adult female 30day    2967 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    2986 embryo 02-04hr    1818 embryo 04-06hr    2322 embryo 06-08hr    2212 embryo 08-10hr    2474 embryo 10-12hr    3665 embryo 12-14hr    2867 embryo 14-16hr    2909 embryo 16-18hr    2859 embryo 18-20hr    2429 embryo 20-22hr    2242 embryo 22-24hr    2295 larva L1    4133 larva L2    4924 larva L3 12hr old    3286 larva L3 puffstage 1-2    1074 larva L3 puffstage 3-6    1346 larva L3 puffstage 7-9    1421 white prepupae new    1631 white prepupae 12hr    1486 white prepupae 24hr    1559 pupae 2d postWPP    2762 pupae 3d postWPP    3525 pupae 4d postWPP    1901 adult male 01day    2547 adult male 05day    2431 adult male 30day    2249 adult female 01day    2393 adult female 05day    2552 adult female 30day    2967 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0051126 expression level Developmental Stage   Expression Level embryo 00-02hr    2986 embryo 02-04hr    1818 embryo 04-06hr    2322 embryo 06-08hr    2212 embryo 08-10hr    2474 embryo 10-12hr    3665 embryo 12-14hr    2867 embryo 14-16hr    2909 embryo 16-18hr    2859 embryo 18-20hr    2429 embryo 20-22hr    2242 embryo 22-24hr    2295 larva L1    4133 larva L2    4924 larva L3 12hr old    3286 larva L3 puffstage 1-2    1074 larva L3 puffstage 3-6    1346 larva L3 puffstage 7-9    1421 white prepupae new    1631 white prepupae 12hr    1486 white prepupae 24hr    1559 pupae 2d postWPP    2762 pupae 3d postWPP    3525 pupae 4d postWPP    1901 adult male 01day    2547 adult male 05day    2431 adult male 30day    2249 adult female 01day    2393 adult female 05day    2552 adult female 30day    2967 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (2986) embryo 02-04hr  (1818) embryo 04-06hr  (2322) embryo 06-08hr  (2212) embryo 08-10hr  (2474) embryo 10-12hr  (3665) embryo 12-14hr  (2867) embryo 14-16hr  (2909) embryo 16-18hr  (2859) embryo 18-20hr  (2429) embryo 20-22hr  (2242) embryo 22-24hr  (2295) larva L1  (4133) larva L2  (4924) larva L3 12hr old  (3286) larva L3 puffstage 1-2  (1074) larva L3 puffstage 3-6  (1346) larva L3 puffstage 7-9  (1421) white prepupae new  (1631) white prepupae 12hr  (1486) white prepupae 24hr  (1559) pupae 2d postWPP  (2762) pupae 3d postWPP  (3525) pupae 4d postWPP  (1901) adult male 01day  (2547) adult male 05day  (2431) adult male 30day  (2249) adult female 01day  (2393) adult female 05day  (2552) adult female 30day  (2967) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (2986) embryo 02-04hr  1818 embryo 04-06hr  2322 embryo 06-08hr  2212 embryo 08-10hr  (2474) embryo 10-12hr  (3665) embryo 12-14hr  (2867) embryo 14-16hr  (2909) embryo 16-18hr  (2859) embryo 18-20hr  2429 embryo 20-22hr  2242 embryo 22-24hr  2295 larva L1  (4133) larva L2  (4924) larva L3 12hr old  (3286) larva L3 puffstage 1-2    1074 larva L3 puffstage 3-6    1346 larva L3 puffstage 7-9  1421 white prepupae new  1631 white prepupae 12hr  1486 white prepupae 24hr  1559 pupae 2d postWPP  (2762) pupae 3d postWPP  (3525) pupae 4d postWPP  1901 adult male 01day  (2547) adult male 05day  2431 adult male 30day  2249 adult female 01day  2393 adult female 05day  (2552) adult female 30day  (2967) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    2986 embryo 02-04hr    1818 embryo 04-06hr    2322 embryo 06-08hr    2212 embryo 08-10hr    2474 embryo 10-12hr    3665 embryo 12-14hr    2867 embryo 14-16hr    2909 embryo 16-18hr    2859 embryo 18-20hr    2429 embryo 20-22hr    2242 embryo 22-24hr    2295 larva L1    4133 larva L2    4924 larva L3 12hr old    3286 larva L3 puffstage 1-2    1074 larva L3 puffstage 3-6    1346 larva L3 puffstage 7-9    1421 white prepupae new    1631 white prepupae 12hr    1486 white prepupae 24hr    1559 pupae 2d postWPP    2762 pupae 3d postWPP    3525 pupae 4d postWPP    1901 adult male 01day    2547 adult male 05day    2431 adult male 30day    2249 adult female 01day    2393 adult female 05day    2552 adult female 30day    2967 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    2986 embryo 02-04hr    1818 embryo 04-06hr    2322 embryo 06-08hr    2212 embryo 08-10hr    2474 embryo 10-12hr    3665 embryo 12-14hr    2867 embryo 14-16hr    2909 embryo 16-18hr    2859 embryo 18-20hr    2429 embryo 20-22hr    2242 embryo 22-24hr    2295 larva L1    4133 larva L2    4924 larva L3 12hr old    3286 larva L3 puffstage 1-2    1074 larva L3 puffstage 3-6    1346 larva L3 puffstage 7-9    1421 white prepupae new    1631 white prepupae 12hr    1486 white prepupae 24hr    1559 pupae 2d postWPP    2762 pupae 3d postWPP    3525 pupae 4d postWPP    1901 adult male 01day    2547 adult male 05day    2431 adult male 30day    2249 adult female 01day    2393 adult female 05day    2552 adult female 30day    2967 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0051126    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0051126 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult testis, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0051126 expression level Tissue   Expression Level Larval Central Nervous System    248.05 Larval Midgut    97.3 Larval Hindgut    144.2 Larval Malpighian Tubules    84.1 Larval Fat Body    94.2 Larval Salivary Gland    137.6 Larval Trachea    127.85 Larval Carcass    139.975 Adult Head    164.3 Adult Eye    132.15 Adult Brain    240 Adult Thoracic-Abdominal Ganglion    289.6 Adult Crop    109.1 Adult Midgut    145.6 Adult Hindgut    156.1 Adult Malpighian Tubules    143.2 Adult Fat Body    172.1 Adult Salivary Gland    218 Adult Heart    162.7 Adult VirginFemale Spermatheca    114.1 Adult InseminatedFemale Spermatheca    99.5 Adult Ovary    223.3 Adult Testis    241.8 Adult Male Accessory Gland    73.7 Adult Carcass    188.4 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    248.05 Larval Midgut    97.3 Larval Hindgut    144.2 Larval Malpighian Tubules    84.1 Larval Fat Body    94.2 Larval Salivary Gland    137.6 Larval Trachea    127.85 Larval Carcass    139.975 Adult Head    164.3 Adult Eye    132.15 Adult Brain    240 Adult Thoracic-Abdominal Ganglion    289.6 Adult Crop    109.1 Adult Midgut    145.6 Adult Hindgut    156.1 Adult Malpighian Tubules    143.2 Adult Fat Body    172.1 Adult Salivary Gland    218 Adult Heart    162.7 Adult VirginFemale Spermatheca    114.1 Adult InseminatedFemale Spermatheca    99.5 Adult Ovary    223.3 Adult Testis    241.8 Adult Male Accessory Gland    73.7 Adult Carcass    188.4 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    248.05 Larval Midgut    97.3 Larval Hindgut    144.2 Larval Malpighian Tubules    84.1 Larval Fat Body    94.2 Larval Salivary Gland    137.6 Larval Trachea    127.85 Larval Carcass    139.975 Adult Head    164.3 Adult Eye    132.15 Adult Brain    240 Adult Thoracic-Abdominal Ganglion    289.6 Adult Crop    109.1 Adult Midgut    145.6 Adult Hindgut    156.1 Adult Malpighian Tubules    143.2 Adult Fat Body    172.1 Adult Salivary Gland    218 Adult Heart    162.7 Adult VirginFemale Spermatheca    114.1 Adult InseminatedFemale Spermatheca    99.5 Adult Ovary    223.3 Adult Testis    241.8 Adult Male Accessory Gland    73.7 Adult Carcass    188.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    248.05 Larval Midgut    97.3 Larval Hindgut    144.2 Larval Malpighian Tubules    84.1 Larval Fat Body    94.2 Larval Salivary Gland    137.6 Larval Trachea    127.85 Larval Carcass    139.975 Adult Head    164.3 Adult Eye    132.15 Adult Brain    240 Adult Thoracic-Abdominal Ganglion    289.6 Adult Crop    109.1 Adult Midgut    145.6 Adult Hindgut    156.1 Adult Malpighian Tubules    143.2 Adult Fat Body    172.1 Adult Salivary Gland    218 Adult Heart    162.7 Adult VirginFemale Spermatheca    114.1 Adult InseminatedFemale Spermatheca    99.5 Adult Ovary    223.3 Adult Testis    241.8 Adult Male Accessory Gland    73.7 Adult Carcass    188.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0051126 expression level Tissue   Expression Level Larval Central Nervous System    248.05 Larval Midgut    97.3 Larval Hindgut    144.2 Larval Malpighian Tubules    84.1 Larval Fat Body    94.2 Larval Salivary Gland    137.6 Larval Trachea    127.85 Larval Carcass    139.975 Adult Head    164.3 Adult Eye    132.15 Adult Brain    240 Adult Thoracic-Abdominal Ganglion    289.6 Adult Crop    109.1 Adult Midgut    145.6 Adult Hindgut    156.1 Adult Malpighian Tubules    143.2 Adult Fat Body    172.1 Adult Salivary Gland    218 Adult Heart    162.7 Adult VirginFemale Spermatheca    114.1 Adult InseminatedFemale Spermatheca    99.5 Adult Ovary    223.3 Adult Testis    241.8 Adult Male Accessory Gland    73.7 Adult Carcass    188.4 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    248.05 Larval Midgut    97.3 Larval Hindgut    144.2 Larval Malpighian Tubules    84.1 Larval Fat Body    94.2 Larval Salivary Gland    137.6 Larval Trachea    127.85 Larval Carcass    139.975 Adult Head    164.3 Adult Eye    132.15 Adult Brain    240 Adult Thoracic-Abdominal Ganglion    289.6 Adult Crop    109.1 Adult Midgut    145.6 Adult Hindgut    156.1 Adult Malpighian Tubules    143.2 Adult Fat Body    172.1 Adult Salivary Gland    218 Adult Heart    162.7 Adult VirginFemale Spermatheca    114.1 Adult InseminatedFemale Spermatheca    99.5 Adult Ovary    223.3 Adult Testis    241.8 Adult Male Accessory Gland    73.7 Adult Carcass    188.4 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    248.05 Larval Midgut    97.3 Larval Hindgut    144.2 Larval Malpighian Tubules    84.1 Larval Fat Body    94.2 Larval Salivary Gland    137.6 Larval Trachea    127.85 Larval Carcass    139.975 Adult Head    164.3 Adult Eye    132.15 Adult Brain    240 Adult Thoracic-Abdominal Ganglion    289.6 Adult Crop    109.1 Adult Midgut    145.6 Adult Hindgut    156.1 Adult Malpighian Tubules    143.2 Adult Fat Body    172.1 Adult Salivary Gland    218 Adult Heart    162.7 Adult VirginFemale Spermatheca    114.1 Adult InseminatedFemale Spermatheca    99.5 Adult Ovary    223.3 Adult Testis    241.8 Adult Male Accessory Gland    73.7 Adult Carcass    188.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    248.05 Larval Midgut    97.3 Larval Hindgut    144.2 Larval Malpighian Tubules    84.1 Larval Fat Body    94.2 Larval Salivary Gland    137.6 Larval Trachea    127.85 Larval Carcass    139.975 Adult Head    164.3 Adult Eye    132.15 Adult Brain    240 Adult Thoracic-Abdominal Ganglion    289.6 Adult Crop    109.1 Adult Midgut    145.6 Adult Hindgut    156.1 Adult Malpighian Tubules    143.2 Adult Fat Body    172.1 Adult Salivary Gland    218 Adult Heart    162.7 Adult VirginFemale Spermatheca    114.1 Adult InseminatedFemale Spermatheca    99.5 Adult Ovary    223.3 Adult Testis    241.8 Adult Male Accessory Gland    73.7 Adult Carcass    188.4 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    164.3   NA  Eye    132.15   NA  Brain    240   248.05  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    289.6   NA  Crop    109.1   97.3  Midgut    145.6   144.2  Hindgut    156.1   84.1  Malpighian Tubules    143.2   94.2  Fat Body    172.1   137.6  Salivary Gland    218   NA  Heart    162.7   127.85  Trachea    NA   NA  VirginFemale Spermatheca    114.1   NA  InseminatedFemale Spermatheca    99.5   NA  Ovary    223.3   NA  Testis    241.8   NA  Male Accessory Gland    73.7   139.975  Carcass    188.4 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_19
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0051126 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31126-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG31126GD13471 CG31126GD17428 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG31126 Class Mutagen Stocks Known lesion CG31126EY23480 1 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG31126 Class Mutagen Stocks Known lesion CG31126GD13471 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG31126GD17428 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG31126KK109312 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD13471} NA P{GD17428} NA P{KK109312} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}CG31126EY23480 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
	There is no information supporting a biological process, cellular component or molecular function term for this gene. (Based on a review of available data on: 2004-05-11)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG31126 allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0051126 DroID - A comprehensive database of gene and protein interactions. • FBgn0051126 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 326121
Orthologs
Genome-wide drosophilid orthologs	Dana\GF17220 Dere\GG11308 Dgri\GH18440 Dmoj\GI24016 Dper\GL13616 Dpse\GA16028 Dsec\GM26617 Dsim\GD21119 Dvir\GJ23647 Dwil\GK10967 Dyak\GE23505
Curated drosophilid orthologs	Dpse\GA16028
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL003755-PA Aedes aegypti (mosquito) AGAP003706-PA Anopheles gambiae (mosquito) XP_624344.2 Apis mellifera (honey bee) XP_001949681.1 Acyrthosiphon pisum (pea aphid) 89896 Batrachochytrium dendrobatidis (chytrid fungus) 202892 Branchiostoma floridae (lancelet) 203075 Branchiostoma floridae (lancelet) BGIBMGA008047-PA Bombyx mori (silk worm) ENSBTAP00000043360 Bos taurus (bovine) CAL0001596 Candida albicans (a form of yeast) CN04452 Caenorhabditis brenneri (small nematode) CBP05064 Caenorhabditis briggsae (nematode) CE12146 Caenorhabditis elegans (worm) ENSCAFP00000017008 Canis familiaris (dog) CAGL0M12210g Candida glabrata (haploid yeast) JA01492 Caenorhabditis japonica (nematode) CML011C Cyanidioschyzon merolae (red alga) CMR275C Cyanidioschyzon merolae (red alga) cn10106 Cryptococcus neoformans (yeast-like fungus) CPIJ005771 Culex pipens (mosquito) ENSCPOP00000009202 Cavia porcellus (guinea pig) 180018 Chlamidomonas reinhardtii (green alga) 118429 Capitella spl (polychaete worm) DDB0266826 Dictyostelium discoideum (amoeba) DEHA2D05566g Debaryomyces Hansenii (yeast) 43049 Daphnia pulex (daphnia) ENSDARP00000058384 Danio rerio (zebra fish) NP_414969.4 Escherichia coli K12 (bacteria) ENSGACP00000017438 Gymnopilus aculeatus (mushroom) 71625 Hypsipyla robusta (cedar shoot borer) ENSP00000358149 Homo sapiens (human) ISCW004806-PA Ixodes scapularis (deer tick) 154157 Lottia gigantea (owl limpet) LmjF21.1855 Leishmania major (virus) ENSMMUP00000009517 Macaca mulatta (rhesus monkey) ENSMUSP00000102716 Mus musculus (house mouse) 157243 Nematostella vectensis (starlet anemone) XP_001605871.1 Nasonia vitripennis (wasp) ENSORLP00000020400 Oryzias latipes (japanese killifish) LOC_Os03g11990.1 Oryza sativa (asian rice) 14702 Ostreococcus tauri (green alga) PHUM004358-PA Pediculus humanus (human body louse) PP26145 Pristionchus pacificus (nematode) ENSPPYP00000001068 Pongo pygmaeus (orangutan) 158648 Phytophthora sojae (root rot pathogen) 422611 Populus trichocarpa (black cottonwood) ENSPTRP00000002104 Pan troglodytes (chimpanzee) ENSRNOP00000028767 Rattus norvegicus (norway rat) 5038687 Sorghum bicolor (sorghum) SPBC16E9.06c Schizosaccharomyces pombe (fission yeast) 63109 Trichoplax adhaerens (metazoa) XP_001809489.1 Tribolium castaneum (red flour beetle) ENSTNIP00000013201 Tetraodon nigroviridis (green spotted pufferfish) 40 Thalassiosira pseudonana (marine diatom) ENSTRUP00000009912 Takifugu rubripes (pufferfish Takifugu) 3706.m01512 Tetrahymena thermophila (ciliate protozoa) YALI0E00572g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB17167 NV13601 LH18746 ISCW004806 FBgn0240684 FBgn0212978 FBgn0210744 FBgn0192573 FBgn0181470 JGI_V11_43049 FBgn0076044 FBgn0151221 FBgn0146739 FBgn0125908 FBgn0103609 FBgn0094238 CPIJ005771 BGIBMGA008047 ACYPI001337 GB17438 AGAP003706 AAEL003755 PHUM567520 GLEAN_11286
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	22638 y1 w67c23; P{EPgy2}CG31126EY23480/TM3, Sb1 Ser1
VDRC	v108407 P{KK109312}VIE-260B v49276 w1118; P{GD17428}v49276 v23392 w1118; P{GD13471}v23392/TM3 v23395 w1118; P{GD13471}v23395/TM3 v49277 w1118; P{GD17428}v49277/TM3
Genomic Clones ( 2 )
	BACR35N03 BACR47D16 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 12 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	IP05796
Other clones	DPiM_IP05796 IP05996
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT01282
Other clones	81835 97942 146758 EK215410 EK220525 EK278104 IP05696 IP05896
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0051126 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 326121
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	Annotation CG13621 renamed CG31126 in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_170162 RefSeq (Proteins) • NP_733027 DDBJ / EMBL / GenBank • AAF56322 Entrez Gene - A searchable database of RefSeq genes. • 326121 UniProtKB/TrEMBL • Q9VC53
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • BolA protein (IPR002634)
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0051126 DroID - A comprehensive database of gene and protein interactions. • FBgn0051126 DRSC - Results from RNAi screens. • FBgn0051126 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0051126 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31126-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0051126 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 326121 InParanoid A subset of ortholog calls from InParanoid. • AAEL003755-PA Aedes aegypti (mosquito) AGAP003706-PA Anopheles gambiae (mosquito) XP_624344.2 Apis mellifera (honey bee) XP_001949681.1 Acyrthosiphon pisum (pea aphid) 89896 Batrachochytrium dendrobatidis (chytrid fungus) 202892 Branchiostoma floridae (lancelet) 203075 Branchiostoma floridae (lancelet) BGIBMGA008047-PA Bombyx mori (silk worm) ENSBTAP00000043360 Bos taurus (bovine) CAL0001596 Candida albicans (a form of yeast) CN04452 Caenorhabditis brenneri (small nematode) CBP05064 Caenorhabditis briggsae (nematode) CE12146 Caenorhabditis elegans (worm) ENSCAFP00000017008 Canis familiaris (dog) CAGL0M12210g Candida glabrata (haploid yeast) JA01492 Caenorhabditis japonica (nematode) CML011C Cyanidioschyzon merolae (red alga) CMR275C Cyanidioschyzon merolae (red alga) cn10106 Cryptococcus neoformans (yeast-like fungus) CPIJ005771 Culex pipens (mosquito) ENSCPOP00000009202 Cavia porcellus (guinea pig) 180018 Chlamidomonas reinhardtii (green alga) 118429 Capitella spl (polychaete worm) DDB0266826 Dictyostelium discoideum (amoeba) DEHA2D05566g Debaryomyces Hansenii (yeast) 43049 Daphnia pulex (daphnia) ENSDARP00000058384 Danio rerio (zebra fish) NP_414969.4 Escherichia coli K12 (bacteria) ENSGACP00000017438 Gymnopilus aculeatus (mushroom) 71625 Hypsipyla robusta (cedar shoot borer) ENSP00000358149 Homo sapiens (human) ISCW004806-PA Ixodes scapularis (deer tick) 154157 Lottia gigantea (owl limpet) LmjF21.1855 Leishmania major (virus) ENSMMUP00000009517 Macaca mulatta (rhesus monkey) ENSMUSP00000102716 Mus musculus (house mouse) 157243 Nematostella vectensis (starlet anemone) XP_001605871.1 Nasonia vitripennis (wasp) ENSORLP00000020400 Oryzias latipes (japanese killifish) LOC_Os03g11990.1 Oryza sativa (asian rice) 14702 Ostreococcus tauri (green alga) PHUM004358-PA Pediculus humanus (human body louse) PP26145 Pristionchus pacificus (nematode) ENSPPYP00000001068 Pongo pygmaeus (orangutan) 158648 Phytophthora sojae (root rot pathogen) 422611 Populus trichocarpa (black cottonwood) ENSPTRP00000002104 Pan troglodytes (chimpanzee) ENSRNOP00000028767 Rattus norvegicus (norway rat) 5038687 Sorghum bicolor (sorghum) SPBC16E9.06c Schizosaccharomyces pombe (fission yeast) 63109 Trichoplax adhaerens (metazoa) XP_001809489.1 Tribolium castaneum (red flour beetle) ENSTNIP00000013201 Tetraodon nigroviridis (green spotted pufferfish) 40 Thalassiosira pseudonana (marine diatom) ENSTRUP00000009912 Takifugu rubripes (pufferfish Takifugu) 3706.m01512 Tetrahymena thermophila (ciliate protozoa) YALI0E00572g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 326121 modMine - Data generated by the modENCODE project. • FBgn0051126 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB17167 NV13601 LH18746 ISCW004806 FBgn0240684 FBgn0212978 FBgn0210744 FBgn0192573 FBgn0181470 JGI_V11_43049 FBgn0076044 FBgn0151221 FBgn0146739 FBgn0125908 FBgn0103609 FBgn0094238 CPIJ005771 BGIBMGA008047 ACYPI001337 GB17438 AGAP003706 AAEL003755 PHUM567520 GLEAN_11286
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	CG13621 (Luschnig, 2003.12.17, ) CG31126 (Farny et al., 2008, Keleman et al., 2009.8.5, Cammarato et al., 2011)
Name Synonym
Secondary FlyBase IDs
	FBgn0039216
References ( 13 )
Research paper	Farny et al., 2008, Genes Dev. 22(1): 66--78 Definition of global and transcript-specific mRNA export pathways in metazoans. [FBrf0200863]
Supplementary material	Cammarato et al., 2011, PLoS ONE 6(4): Table S1. Proteins & Peptides. [FBrf0214682] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Review	Zdobnov et al., 2002, Science 298(5591): 149--159 Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster. [FBrf0152342]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Luschnig, 2003.12.17, Existence-uncertain genes. Existence-uncertain genes. [FBrf0173248]
FlyBase analysis	FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955] FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886] FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398]