• Home
• Tools
  • Tools Overview
  • Query Tools

    
    • QuickSearch
    • QueryBuilder
    • TermLink
    • CytoSearch
    • RNA-Seq Search
    • Interactions Browser
    • ImageBrowse
    • Find A Person
    • Google™ FlyBase
  • Genomic/Map Tools

    
    • BLAST
    • GBrowse
    • GBrowse 2 Beta
    • CytoSearch
    • Feature Mapper
    • Aberrations Maps
    • Chromosome Maps
    • Coordinates Converter
  • Retrieve/Convert

    
    • Batch Download
    • Coordinates Converter
    • ID Converter
  • Data Submission

    
    • Fast-Track Your Paper
    • Submit Personal Comm
    • Add A New Person
    • Update Person Info
  • People

    
    • Find A Person
    • Add A New Person
    • Update Person Info
• Files
  • Files Overview
  • Current release
  • Archived releases
  • Map Conversion
  • FTP site:
  • Releases (FTP)
  • Genomes (FTP)
• Species
  • Phylogeny
  • Sequenced Species
  • Synteny Table
  • Color Illustrations
  • Abbreviations
• Documents
  • About FlyBase
  • Reference Manual:
  • Sections
  • Contents
  • Nomenclature
  • Release Notes
• Resources
  • All Resources
  • Model Organisms
  • Stock Collections
  • Vectors & Constructs
  • Other links:
  • BDGP
  • DGRC
  • DIS by issue
  • FlyExpress
  • Interactive Fly
  • modENCODE
  • Textpresso for Fly
• News
  • News
  • FlyBase Forum
  • FlyBase Positions
  • Meetings
  • Courses
  • Fly Board
  • White papers
  • Funding
  • bionet.dros
• Help
  • Google™ FlyBase
  • Site Map
  • FAQs
  • FlyBase Guides
  • Video Tutorials
  • Report help
  • New to Flies
  • Pers. comm.
  • Author guidelines
  • Contact FlyBase
• Archives
  • Prior Release
  • Other Archives
  • Coordinate Converter

Gene Dmel\wge

General Information
Symbol	Dmel\wge	Species	D. melanogaster
Name	winged eye	Annotation symbol	CG31151
Feature type	protein_coding_gene	FlyBase ID	FBgn0051151
Gene Model Status	Current	Stock availability	7 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	94C2-94C3	Sequence location	3R:18,536,605..18,546,872 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene winged eye is referred to in FlyBase by the symbol Dmel\wge (CG31151, FBgn0051151). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: DNA binding. There is experimental evidence that it is involved in the biological process: imaginal disc morphogenesis. 10 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Bromo adjacent homology (BAH) domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1624097_s_at completely aligns to an exonic region common to each of the 3 FlyBase-annotated transcript isoforms of wge. Gene sequence location is 3R:18536605..18546872.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 94C2-94C3   Limits computationally determined from genome sequence between P{lacW}GclmL0580 and P{EP}hhEP3521
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\wge for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.43 Gene model reviewed during 5.47 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) wge-RC FBtr0110835  NM_001043281   5778   1658 wge-RD FBtr0310425  NM_170037   5811   1669 wge-RE FBtr0310426  NM_001275918   6443   1660 wge-RF FBtr0310427  NM_170038   6293   1610
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein wge-PC   FBpp0110132   178.3   1658   6.98     NP_001036746   ABI31197 wge-PD   FBpp0302573   179.5   1669   6.98     NP_732790   AAF56050 wge-PE   FBpp0302574   178.3   1660   7.07     NP_001262847   AGB96227 wge-PF   FBpp0302575   173.2   1610   7.12     NP_732791   AAF56049
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Bromo adjacent homology (BAH) domain (IPR001025)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA440533   AA951922   AE014297 AAF56049   AE014297 AAF56050   AE014297 ABI31197   AE014297 AGB96227   AI294717   AI388822   AI515385   AI515700   AI543163   AI546519   AW942347   AY118516 AAM49885   BG639007   BI141956   BI636051   BI639926   BP545709   BP545710   BP552957   BP552958   BP552963   BP552964   BP557151   BP557760   BP557761   BQ103069   BT099586   CK658006   CO154060   CO156806   CO177362   CO181822   CO189347   CO190069   CO263313   CO268898   CO269609   CO271390   CO276856   CO277857   CO281634   CO290050   CO291543   CO296401   CO305398   CO306927   CO307551   CO312262   CO316922   CO317034   CO330973   CO331699   CO339526   CO341935   CO342970   CO344523   EC051923   EC057981   EC057982   EC058816   EC063529   EC071402   EC079020   EC079162   EC080723   EC083990   EC088803   EC201701   EC203612   EC207148   EC210794   EC215406   EC219974   EC220549   EC249204   EC255529   EC256314   EC259803   EC260547   EC266709   EL875292   EL884136   EL884137   EL884269   EL884270   EV576153   EV579470   EV592260   EV593015   EV600700   GH752269
UniProtKB/Swiss-Prot	Q3LHL9
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
chromatin inferred from direct assay (assigned by UniProtKB) (Katsuyama et al., 2005)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    261.75 Larval Midgut    126.6 Larval Hindgut    156.1 Larval Malpighian Tubules    167.6 Larval Fat Body    84.2 Larval Salivary Gland    150.9 Larval Trachea    126.85 Larval Carcass    150.7 Adult Head    96.6 Adult Eye    92.85 Adult Brain    307.2 Adult Thoracic-Abdominal Ganglion    307.9 Adult Crop    146.3 Adult Midgut    102.9 Adult Hindgut    125.7 Adult Malpighian Tubules    204.6 Adult Fat Body    118.1 Adult Salivary Gland    104.9 Adult Heart    105.6 Adult VirginFemale Spermatheca    110.7 Adult InseminatedFemale Spermatheca    114.2 Adult Ovary    236.7 Adult Testis    22.9 Adult Male Accessory Gland    142.4 Adult Carcass    104.9 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    261.75 Larval Midgut    126.6 Larval Hindgut    156.1 Larval Malpighian Tubules    167.6 Larval Fat Body    84.2 Larval Salivary Gland    150.9 Larval Trachea    126.85 Larval Carcass    150.7 Adult Head    96.6 Adult Eye    92.85 Adult Brain    307.2 Adult Thoracic-Abdominal Ganglion    307.9 Adult Crop    146.3 Adult Midgut    102.9 Adult Hindgut    125.7 Adult Malpighian Tubules    204.6 Adult Fat Body    118.1 Adult Salivary Gland    104.9 Adult Heart    105.6 Adult VirginFemale Spermatheca    110.7 Adult InseminatedFemale Spermatheca    114.2 Adult Ovary    236.7 Adult Testis    22.9 Adult Male Accessory Gland    142.4 Adult Carcass    104.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    261.75 Larval Midgut    126.6 Larval Hindgut    156.1 Larval Malpighian Tubules    167.6 Larval Fat Body    84.2 Larval Salivary Gland    150.9 Larval Trachea    126.85 Larval Carcass    150.7 Adult Head    96.6 Adult Eye    92.85 Adult Brain    307.2 Adult Thoracic-Abdominal Ganglion    307.9 Adult Crop    146.3 Adult Midgut    102.9 Adult Hindgut    125.7 Adult Malpighian Tubules    204.6 Adult Fat Body    118.1 Adult Salivary Gland    104.9 Adult Heart    105.6 Adult VirginFemale Spermatheca    110.7 Adult InseminatedFemale Spermatheca    114.2 Adult Ovary    236.7 Adult Testis    22.9 Adult Male Accessory Gland    142.4 Adult Carcass    104.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    261.75 Larval Midgut    126.6 Larval Hindgut    156.1 Larval Malpighian Tubules    167.6 Larval Fat Body    84.2 Larval Salivary Gland    150.9 Larval Trachea    126.85 Larval Carcass    150.7 Adult Head    96.6 Adult Eye    92.85 Adult Brain    307.2 Adult Thoracic-Abdominal Ganglion    307.9 Adult Crop    146.3 Adult Midgut    102.9 Adult Hindgut    125.7 Adult Malpighian Tubules    204.6 Adult Fat Body    118.1 Adult Salivary Gland    104.9 Adult Heart    105.6 Adult VirginFemale Spermatheca    110.7 Adult InseminatedFemale Spermatheca    114.2 Adult Ovary    236.7 Adult Testis    22.9 Adult Male Accessory Gland    142.4 Adult Carcass    104.9 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    261.75 Larval Midgut    126.6 Larval Hindgut    156.1 Larval Malpighian Tubules    167.6 Larval Fat Body    84.2 Larval Salivary Gland    150.9 Larval Trachea    126.85 Larval Carcass    150.7 Adult Head    96.6 Adult Eye    92.85 Adult Brain    307.2 Adult Thoracic-Abdominal Ganglion    307.9 Adult Crop    146.3 Adult Midgut    102.9 Adult Hindgut    125.7 Adult Malpighian Tubules    204.6 Adult Fat Body    118.1 Adult Salivary Gland    104.9 Adult Heart    105.6 Adult VirginFemale Spermatheca    110.7 Adult InseminatedFemale Spermatheca    114.2 Adult Ovary    236.7 Adult Testis    22.9 Adult Male Accessory Gland    142.4 Adult Carcass    104.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    261.75 Larval Midgut    126.6 Larval Hindgut    156.1 Larval Malpighian Tubules    167.6 Larval Fat Body    84.2 Larval Salivary Gland    150.9 Larval Trachea    126.85 Larval Carcass    150.7 Adult Head    96.6 Adult Eye    92.85 Adult Brain    307.2 Adult Thoracic-Abdominal Ganglion    307.9 Adult Crop    146.3 Adult Midgut    102.9 Adult Hindgut    125.7 Adult Malpighian Tubules    204.6 Adult Fat Body    118.1 Adult Salivary Gland    104.9 Adult Heart    105.6 Adult VirginFemale Spermatheca    110.7 Adult InseminatedFemale Spermatheca    114.2 Adult Ovary    236.7 Adult Testis    22.9 Adult Male Accessory Gland    142.4 Adult Carcass    104.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    261.75 Larval Midgut    126.6 Larval Hindgut    156.1 Larval Malpighian Tubules    167.6 Larval Fat Body    84.2 Larval Salivary Gland    150.9 Larval Trachea    126.85 Larval Carcass    150.7 Adult Head    96.6 Adult Eye    92.85 Adult Brain    307.2 Adult Thoracic-Abdominal Ganglion    307.9 Adult Crop    146.3 Adult Midgut    102.9 Adult Hindgut    125.7 Adult Malpighian Tubules    204.6 Adult Fat Body    118.1 Adult Salivary Gland    104.9 Adult Heart    105.6 Adult VirginFemale Spermatheca    110.7 Adult InseminatedFemale Spermatheca    114.2 Adult Ovary    236.7 Adult Testis    22.9 Adult Male Accessory Gland    142.4 Adult Carcass    104.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    261.75 Larval Midgut    126.6 Larval Hindgut    156.1 Larval Malpighian Tubules    167.6 Larval Fat Body    84.2 Larval Salivary Gland    150.9 Larval Trachea    126.85 Larval Carcass    150.7 Adult Head    96.6 Adult Eye    92.85 Adult Brain    307.2 Adult Thoracic-Abdominal Ganglion    307.9 Adult Crop    146.3 Adult Midgut    102.9 Adult Hindgut    125.7 Adult Malpighian Tubules    204.6 Adult Fat Body    118.1 Adult Salivary Gland    104.9 Adult Heart    105.6 Adult VirginFemale Spermatheca    110.7 Adult InseminatedFemale Spermatheca    114.2 Adult Ovary    236.7 Adult Testis    22.9 Adult Male Accessory Gland    142.4 Adult Carcass    104.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    96.6   NA  Eye    92.85   NA  Brain    307.2   261.75  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    307.9   NA  Crop    146.3   126.6  Midgut    102.9   156.1  Hindgut    125.7   167.6  Malpighian Tubules    204.6   84.2  Fat Body    118.1   150.9  Salivary Gland    104.9   NA  Heart    105.6   126.85  Trachea    NA   NA  VirginFemale Spermatheca    110.7   NA  InseminatedFemale Spermatheca    114.2   NA  Ovary    236.7   NA  Testis    22.9   NA  Male Accessory Gland    142.4   150.7  Carcass    104.9 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    22 central nervous system, larvae L3    25 central nervous system, pupae P8    15 head, virgin 1-day female    13 head, virgin 4-day female    15 head, virgin 20-day female    10 head, mated 1-day female    15 head, mated 4-day female    12 head, mated 20-day female    11 head, mated 1-day male    17 head, mated 4-day male    18 head, mated 20-day male    14 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    10 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    8 digestive system, 4-day adult    13 digestive system, 20-day adult    10 fat body, larvae L3 wandering    7 fat body, white prepupae    11 fat body, pupae P8    9 carcass, larvae L3 wandering    17 carcass, 1-day adult    11 carcass, 4-day adult    13 carcass, 20-day adult    12 ovary, virgin 4-day female    47 ovary, mated 4-day female    47 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    22 central nervous system, larvae L3    25 central nervous system, pupae P8    15 head, virgin 1-day female    13 head, virgin 4-day female    15 head, virgin 20-day female    10 head, mated 1-day female    15 head, mated 4-day female    12 head, mated 20-day female    11 head, mated 1-day male    17 head, mated 4-day male    18 head, mated 20-day male    14 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    10 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    8 digestive system, 4-day adult    13 digestive system, 20-day adult    10 fat body, larvae L3 wandering    7 fat body, white prepupae    11 fat body, pupae P8    9 carcass, larvae L3 wandering    17 carcass, 1-day adult    11 carcass, 4-day adult    13 carcass, 20-day adult    12 ovary, virgin 4-day female  (47) ovary, mated 4-day female  (47) testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    22 central nervous system, larvae L3    25 central nervous system, pupae P8    15 head, virgin 1-day female    13 head, virgin 4-day female    15 head, virgin 20-day female    10 head, mated 1-day female    15 head, mated 4-day female    12 head, mated 20-day female    11 head, mated 1-day male    17 head, mated 4-day male    18 head, mated 20-day male    14 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    10 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    8 digestive system, 4-day adult    13 digestive system, 20-day adult    10 fat body, larvae L3 wandering    7 fat body, white prepupae    11 fat body, pupae P8    9 carcass, larvae L3 wandering    17 carcass, 1-day adult    11 carcass, 4-day adult    13 carcass, 20-day adult    12 ovary, virgin 4-day female    47 ovary, mated 4-day female    47 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    22 central nervous system, larvae L3    25 central nervous system, pupae P8    15 head, virgin 1-day female    13 head, virgin 4-day female    15 head, virgin 20-day female    10 head, mated 1-day female    15 head, mated 4-day female    12 head, mated 20-day female    11 head, mated 1-day male    17 head, mated 4-day male    18 head, mated 20-day male    14 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    10 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    8 digestive system, 4-day adult    13 digestive system, 20-day adult    10 fat body, larvae L3 wandering    7 fat body, white prepupae    11 fat body, pupae P8    9 carcass, larvae L3 wandering    17 carcass, 1-day adult    11 carcass, 4-day adult    13 carcass, 20-day adult    12 ovary, virgin 4-day female    47 ovary, mated 4-day female    47 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    22 central nervous system, larvae L3    25 central nervous system, pupae P8    15 head, virgin 1-day female    13 head, virgin 4-day female    15 head, virgin 20-day female    10 head, mated 1-day female    15 head, mated 4-day female    12 head, mated 20-day female    11 head, mated 1-day male    17 head, mated 4-day male    18 head, mated 20-day male    14 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    10 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    8 digestive system, 4-day adult    13 digestive system, 20-day adult    10 fat body, larvae L3 wandering    7 fat body, white prepupae    11 fat body, pupae P8    9 carcass, larvae L3 wandering    17 carcass, 1-day adult    11 carcass, 4-day adult    13 carcass, 20-day adult    12 ovary, virgin 4-day female    47 ovary, mated 4-day female    47 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    22 central nervous system, larvae L3    25 central nervous system, pupae P8    15 head, virgin 1-day female    13 head, virgin 4-day female    15 head, virgin 20-day female    10 head, mated 1-day female    15 head, mated 4-day female    12 head, mated 20-day female    11 head, mated 1-day male    17 head, mated 4-day male    18 head, mated 20-day male    14 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    10 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    8 digestive system, 4-day adult    13 digestive system, 20-day adult    10 fat body, larvae L3 wandering    7 fat body, white prepupae    11 fat body, pupae P8    9 carcass, larvae L3 wandering    17 carcass, 1-day adult    11 carcass, 4-day adult    13 carcass, 20-day adult    12 ovary, virgin 4-day female  (47) ovary, mated 4-day female  (47) testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    22 central nervous system, larvae L3    25 central nervous system, pupae P8    15 head, virgin 1-day female    13 head, virgin 4-day female    15 head, virgin 20-day female    10 head, mated 1-day female    15 head, mated 4-day female    12 head, mated 20-day female    11 head, mated 1-day male    17 head, mated 4-day male    18 head, mated 20-day male    14 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    10 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    8 digestive system, 4-day adult    13 digestive system, 20-day adult    10 fat body, larvae L3 wandering    7 fat body, white prepupae    11 fat body, pupae P8    9 carcass, larvae L3 wandering    17 carcass, 1-day adult    11 carcass, 4-day adult    13 carcass, 20-day adult    12 ovary, virgin 4-day female    47 ovary, mated 4-day female    47 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    22 central nervous system, larvae L3    25 central nervous system, pupae P8    15 head, virgin 1-day female    13 head, virgin 4-day female    15 head, virgin 20-day female    10 head, mated 1-day female    15 head, mated 4-day female    12 head, mated 20-day female    11 head, mated 1-day male    17 head, mated 4-day male    18 head, mated 20-day male    14 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    10 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    8 digestive system, 4-day adult    13 digestive system, 20-day adult    10 fat body, larvae L3 wandering    7 fat body, white prepupae    11 fat body, pupae P8    9 carcass, larvae L3 wandering    17 carcass, 1-day adult    11 carcass, 4-day adult    13 carcass, 20-day adult    12 ovary, virgin 4-day female    47 ovary, mated 4-day female    47 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    51 embryo 02-04hr    32 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    27 embryo 10-12hr    21 embryo 12-14hr    21 embryo 14-16hr    20 embryo 16-18hr    17 embryo 18-20hr    16 embryo 20-22hr    12 embryo 22-24hr    13 larva L1    12 larva L2    10 larva L3 12hr old    10 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    14 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    19 pupae 2d postWPP    14 pupae 3d postWPP    8 pupae 4d postWPP    9 adult male 01day    10 adult male 05day    11 adult male 30day    11 adult female 01day    28 adult female 05day    38 adult female 30day    40 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (51) embryo 02-04hr  (32) embryo 04-06hr    19 embryo 06-08hr  (27) embryo 08-10hr  (27) embryo 10-12hr    21 embryo 12-14hr    21 embryo 14-16hr    20 embryo 16-18hr    17 embryo 18-20hr    16 embryo 20-22hr    12 embryo 22-24hr    13 larva L1    12 larva L2    10 larva L3 12hr old    10 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    14 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    19 pupae 2d postWPP    14 pupae 3d postWPP    8 pupae 4d postWPP    9 adult male 01day    10 adult male 05day    11 adult male 30day    11 adult female 01day  (28) adult female 05day  (38) adult female 30day  (40) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    51 embryo 02-04hr    32 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    27 embryo 10-12hr    21 embryo 12-14hr    21 embryo 14-16hr    20 embryo 16-18hr    17 embryo 18-20hr    16 embryo 20-22hr    12 embryo 22-24hr    13 larva L1    12 larva L2    10 larva L3 12hr old    10 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    14 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    19 pupae 2d postWPP    14 pupae 3d postWPP    8 pupae 4d postWPP    9 adult male 01day    10 adult male 05day    11 adult male 30day    11 adult female 01day    28 adult female 05day    38 adult female 30day    40 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    51 embryo 02-04hr    32 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    27 embryo 10-12hr    21 embryo 12-14hr    21 embryo 14-16hr    20 embryo 16-18hr    17 embryo 18-20hr    16 embryo 20-22hr    12 embryo 22-24hr    13 larva L1    12 larva L2    10 larva L3 12hr old    10 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    14 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    19 pupae 2d postWPP    14 pupae 3d postWPP    8 pupae 4d postWPP    9 adult male 01day    10 adult male 05day    11 adult male 30day    11 adult female 01day    28 adult female 05day    38 adult female 30day    40 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    51 embryo 02-04hr    32 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    27 embryo 10-12hr    21 embryo 12-14hr    21 embryo 14-16hr    20 embryo 16-18hr    17 embryo 18-20hr    16 embryo 20-22hr    12 embryo 22-24hr    13 larva L1    12 larva L2    10 larva L3 12hr old    10 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    14 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    19 pupae 2d postWPP    14 pupae 3d postWPP    8 pupae 4d postWPP    9 adult male 01day    10 adult male 05day    11 adult male 30day    11 adult female 01day    28 adult female 05day    38 adult female 30day    40 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (51) embryo 02-04hr  32 embryo 04-06hr    19 embryo 06-08hr  27 embryo 08-10hr  27 embryo 10-12hr    21 embryo 12-14hr    21 embryo 14-16hr    20 embryo 16-18hr    17 embryo 18-20hr    16 embryo 20-22hr    12 embryo 22-24hr    13 larva L1    12 larva L2    10 larva L3 12hr old    10 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    14 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    19 pupae 2d postWPP    14 pupae 3d postWPP    8 pupae 4d postWPP    9 adult male 01day    10 adult male 05day    11 adult male 30day    11 adult female 01day  28 adult female 05day  (38) adult female 30day  (40) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    51 embryo 02-04hr    32 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    27 embryo 10-12hr    21 embryo 12-14hr    21 embryo 14-16hr    20 embryo 16-18hr    17 embryo 18-20hr    16 embryo 20-22hr    12 embryo 22-24hr    13 larva L1    12 larva L2    10 larva L3 12hr old    10 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    14 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    19 pupae 2d postWPP    14 pupae 3d postWPP    8 pupae 4d postWPP    9 adult male 01day    10 adult male 05day    11 adult male 30day    11 adult female 01day    28 adult female 05day    38 adult female 30day    40 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    51 embryo 02-04hr    32 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    27 embryo 10-12hr    21 embryo 12-14hr    21 embryo 14-16hr    20 embryo 16-18hr    17 embryo 18-20hr    16 embryo 20-22hr    12 embryo 22-24hr    13 larva L1    12 larva L2    10 larva L3 12hr old    10 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    14 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    19 pupae 2d postWPP    14 pupae 3d postWPP    8 pupae 4d postWPP    9 adult male 01day    10 adult male 05day    11 adult male 30day    11 adult female 01day    28 adult female 05day    38 adult female 30day    40 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    47 Schneider line 2 Sg4    82 embryonic 1182-4H    61 embryonic GM2    91 embryonic Kc167    39 embryonic S1    54 embryonic S3    20 leg disc CME L1    94 wing disc CME-W2    45 wing disc ML-DmD8    56 wing disc ML-DmD9    85 wing disc ML-DmD16-c3    72 wing disc ML-DmD21    20 wing disc ML-DmD32    83 haltere disc ML-DmD17-c3    23 eye-antennal disc ML-DmD11    48 antennal disc ML-DmD20-c5    45 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    37 CNS ML-DmBG2-c2    25 tumorous blood cells mbn2    35 ovary fGS/OSS    30 ovary OSC    23 ovary OSS    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (47) Schneider line 2 Sg4  (82) embryonic 1182-4H  (61) embryonic GM2  (91) embryonic Kc167  (39) embryonic S1  (54) embryonic S3    20 leg disc CME L1  (94) wing disc CME-W2  (45) wing disc ML-DmD8  (56) wing disc ML-DmD9  (85) wing disc ML-DmD16-c3  (72) wing disc ML-DmD21    20 wing disc ML-DmD32  (83) haltere disc ML-DmD17-c3    23 eye-antennal disc ML-DmD11  (48) antennal disc ML-DmD20-c5  (45) mixed discs ML-DmD4-c1  (58) CNS ML-DmBG1-c1  (37) CNS ML-DmBG2-c2    25 tumorous blood cells mbn2  (35) ovary fGS/OSS  (30) ovary OSC    23 ovary OSS    17 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    47 Schneider line 2 Sg4    82 embryonic 1182-4H    61 embryonic GM2    91 embryonic Kc167    39 embryonic S1    54 embryonic S3    20 leg disc CME L1    94 wing disc CME-W2    45 wing disc ML-DmD8    56 wing disc ML-DmD9    85 wing disc ML-DmD16-c3    72 wing disc ML-DmD21    20 wing disc ML-DmD32    83 haltere disc ML-DmD17-c3    23 eye-antennal disc ML-DmD11    48 antennal disc ML-DmD20-c5    45 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    37 CNS ML-DmBG2-c2    25 tumorous blood cells mbn2    35 ovary fGS/OSS    30 ovary OSC    23 ovary OSS    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    47 Schneider line 2 Sg4    82 embryonic 1182-4H    61 embryonic GM2    91 embryonic Kc167    39 embryonic S1    54 embryonic S3    20 leg disc CME L1    94 wing disc CME-W2    45 wing disc ML-DmD8    56 wing disc ML-DmD9    85 wing disc ML-DmD16-c3    72 wing disc ML-DmD21    20 wing disc ML-DmD32    83 haltere disc ML-DmD17-c3    23 eye-antennal disc ML-DmD11    48 antennal disc ML-DmD20-c5    45 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    37 CNS ML-DmBG2-c2    25 tumorous blood cells mbn2    35 ovary fGS/OSS    30 ovary OSC    23 ovary OSS    17 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    47 Schneider line 2 Sg4    82 embryonic 1182-4H    61 embryonic GM2    91 embryonic Kc167    39 embryonic S1    54 embryonic S3    20 leg disc CME L1    94 wing disc CME-W2    45 wing disc ML-DmD8    56 wing disc ML-DmD9    85 wing disc ML-DmD16-c3    72 wing disc ML-DmD21    20 wing disc ML-DmD32    83 haltere disc ML-DmD17-c3    23 eye-antennal disc ML-DmD11    48 antennal disc ML-DmD20-c5    45 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    37 CNS ML-DmBG2-c2    25 tumorous blood cells mbn2    35 ovary fGS/OSS    30 ovary OSC    23 ovary OSS    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (47) Schneider line 2 Sg4  (82) embryonic 1182-4H  (61) embryonic GM2  (91) embryonic Kc167  (39) embryonic S1  (54) embryonic S3    20 leg disc CME L1  (94) wing disc CME-W2  (45) wing disc ML-DmD8  (56) wing disc ML-DmD9  (85) wing disc ML-DmD16-c3  (72) wing disc ML-DmD21    20 wing disc ML-DmD32  (83) haltere disc ML-DmD17-c3    23 eye-antennal disc ML-DmD11  (48) antennal disc ML-DmD20-c5  (45) mixed discs ML-DmD4-c1  (58) CNS ML-DmBG1-c1  (37) CNS ML-DmBG2-c2    25 tumorous blood cells mbn2  (35) ovary fGS/OSS  30 ovary OSC    23 ovary OSS    17 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    47 Schneider line 2 Sg4    82 embryonic 1182-4H    61 embryonic GM2    91 embryonic Kc167    39 embryonic S1    54 embryonic S3    20 leg disc CME L1    94 wing disc CME-W2    45 wing disc ML-DmD8    56 wing disc ML-DmD9    85 wing disc ML-DmD16-c3    72 wing disc ML-DmD21    20 wing disc ML-DmD32    83 haltere disc ML-DmD17-c3    23 eye-antennal disc ML-DmD11    48 antennal disc ML-DmD20-c5    45 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    37 CNS ML-DmBG2-c2    25 tumorous blood cells mbn2    35 ovary fGS/OSS    30 ovary OSC    23 ovary OSS    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    47 Schneider line 2 Sg4    82 embryonic 1182-4H    61 embryonic GM2    91 embryonic Kc167    39 embryonic S1    54 embryonic S3    20 leg disc CME L1    94 wing disc CME-W2    45 wing disc ML-DmD8    56 wing disc ML-DmD9    85 wing disc ML-DmD16-c3    72 wing disc ML-DmD21    20 wing disc ML-DmD32    83 haltere disc ML-DmD17-c3    23 eye-antennal disc ML-DmD11    48 antennal disc ML-DmD20-c5    45 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    37 CNS ML-DmBG2-c2    25 tumorous blood cells mbn2    35 ovary fGS/OSS    30 ovary OSC    23 ovary OSS    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    12 cold shock, 4-day adult    8 heat shock, 4-day adult    13 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    39 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    59 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    25 Ethanol 2.5% 3 hrs, larvae L3    27 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    35 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    20 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    12 cold shock, 4-day adult    8 heat shock, 4-day adult    13 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult  (39) Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult  (59) Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    25 Ethanol 2.5% 3 hrs, larvae L3  (27) Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (35) Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    20 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    12 cold shock, 4-day adult    8 heat shock, 4-day adult    13 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    39 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    59 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    25 Ethanol 2.5% 3 hrs, larvae L3    27 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    35 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    20 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    12 cold shock, 4-day adult    8 heat shock, 4-day adult    13 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    39 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    59 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    25 Ethanol 2.5% 3 hrs, larvae L3    27 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    35 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    20 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    12 cold shock, 4-day adult    8 heat shock, 4-day adult    13 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    39 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    59 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    25 Ethanol 2.5% 3 hrs, larvae L3    27 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    35 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    20 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    12 cold shock, 4-day adult    8 heat shock, 4-day adult    13 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult  (39) Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult  (59) Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    25 Ethanol 2.5% 3 hrs, larvae L3  27 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (35) Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    20 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    12 cold shock, 4-day adult    8 heat shock, 4-day adult    13 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    39 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    59 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    25 Ethanol 2.5% 3 hrs, larvae L3    27 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    35 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    20 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    12 cold shock, 4-day adult    8 heat shock, 4-day adult    13 Cadmium 50 mM 6 hrs, larvae L3    4 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    39 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    59 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    25 Ethanol 2.5% 3 hrs, larvae L3    27 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    35 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    20 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_01 mE1_20_mRNA_expression_cluster_09
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0051151 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31151-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 4 )
For All Classical Alleles Show
Allele of wge Class Mutagen Stocks Known lesion wge40 P-element activity 1 Yes wgeGS15923 P-element activity 1 -- wgeMB00520 1 -- wgeDG16506 0 --
Alleles Carried on Transgenic Constructs ( 6 )
For All Alleles Carried on Transgenic Constructs Show
Allele of wge Class Mutagen Stocks Known lesion wgeGD5185 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes wgedsRNA.Scer\UAS in vitro construct - regulatory fusion in vitro construct - coding region fusion in vitro construct - RNAi 1 Yes wgeScer\UAS.T:Zzzz\FLAG in vitro construct - regulatory fusion in vitro construct - coding region fusion 1 Yes wgeScer\UAS.cKa in vitro construct - regulatory fusion 0 Yes wgeScer\UAS.T:Ivir\HA1 in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes wgeΔBAH.Scer\UAS.T:Zzzz\FLAG in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6192 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD5185} NA P{UAS-wge.dsRNA} NA P{UAS-wge.FLAG} NA P{UAS-wge.K} NA P{UAS-wge.ΔBAH.FLAG} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{GSV6}wgeGS15923 NA insertion of enhancer trap binary system Mi{ET1}wgeMB00520 No
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 2 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
imaginal disc morphogenesis inferred from mutant phenotype (assigned by UniProtKB) (Katsuyama et al., 2005)
Cellular Component
CV term Evidence References
chromatin inferred from direct assay (assigned by UniProtKB) (Katsuyama et al., 2005)
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
DNA binding inferred from electronic annotation with InterPro:IPR001025 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions wge allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 67637 DroID - A comprehensive database of gene and protein interactions. • FBgn0051151 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42687
Orthologs
OrthoDB Orthologs (35) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6DR9Z1 Dipteran inclusive ortholog search EOG6JT0DR Insect inclusive ortholog search EOG6RBPDN Arthropod inclusive ortholog search EOG6V9S5N Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG6DR9Z1)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\wge     Drosophila simulans   Dsim\GD18436 Y   Drosophila sechellia   Dsec\GM23624 Y   Drosophila erecta   Dere\GG25263     Drosophila erecta   Dere\GG12492 Y   Drosophila yakuba   Dyak\GE24012 Y   Drosophila ananassae   Dana\GF16694 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA27054 Y   Drosophila persimilis   Dper\GL23782 Y   Drosophila willistoni   Dwil\GK11628 Y   Drosophila virilis   Dvir\GJ24361 Y   Drosophila mojavensis   Dmoj\GI24350 Y   Drosophila grimshawi   Dgri\GH18505 Y
Orthologs in non-Drosophila Dipterans (EOG6JT0DR)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL000015   Anopheles gambiae Malaria mosquito  Agam\AGAP003827   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ007925
Orthologs in non-Dipteran Insects (EOG6RBPDN)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB41570   Apis mellifera Western honey bee  Amel\GB45598   Apis mellifera Western honey bee  Amel\GB41747   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH17569   Atta cephalotes Leafcutter ant  Acep\ACEP15850   Camponotus floridanus Florida carpenter ant  Cflo\CFLO19223   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL20865   Linepithema humile Argentine ant  Lhum\LH12138   Pogonomyrmex barbatus Red harvester ant  Pbar\PB14592   Pogonomyrmex barbatus Red harvester ant  Pbar\PB14595   Solenopsis invicta Red fire ant  Sinv\SINV21800   Solenopsis invicta Red fire ant  Sinv\SINV21854   Acyrthosiphon pisum Pea aphid  Apim\ACYPI005098   Bombyx mori Silkmoth  Bmor\BGIBMGA003928   Pediculus humanus Human body louse  Phum\PHUM234960   Tribolium castaneum Red flour beetle  Tcas\TC002191
Orthologs in non-Insect Arthropods (EOG6V9S5N)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_107305   Daphnia pulex Water flea  Dpux\Kcng4   Ixodes scapularis Deer tick  Isca\ISCW018978
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD18436 Drosophila sechellia Dsec\GM23624 Drosophila erecta Dere\GG12492 Drosophila yakuba Dyak\GE24012 Drosophila ananassae Dana\GF16694 Drosophila pseudoobscura pseudoobscura Dpse\GA27054 Drosophila persimilis Dper\GL23782 Drosophila willistoni Dwil\GK11628 Drosophila virilis Dvir\GJ24361 Drosophila mojavensis Dmoj\GI24350 Drosophila grimshawi Dgri\GH18505
Stocks & Reagents
Stocks Listed in FlyBase ( 7 )
Bloomington	26812 P{UAS-wge.FLAG}1, w* 26813 y1 w*; P{UAS-wge.dsRNA}2 23725 y1 w67c23; Mi{ET1}wgeMB00520 26814 w*; wge40/TM3, P{ActGFP}JMR2, Ser1
Kyoto	206414 y1 w67c23; P{GSV6}wgeGS15923/TM3, Sb1 Ser1
VDRC	v51230 w1118; P{GD5185}v51230 v51341 w1118; P{GD5185}v51341/TM3
Genomic Clones ( 2 )
	BACR02L12 BACR23F10 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 79 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD15342 LP24488
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH19846 LD32832 LD47190 LP08153 LP14482 SD02830 SD09789 SD15936 SD17616 SD22647
Other clones	1119 16239 42669 70514 80343 145224 145867 148957 162548 193557 214245.5 214257.61 214311.3 214351.8 273688 528261 CK01.54A.A8 CK01.57D.F1 CK01.65B.F10 CK01.93C.C4 CK01.121D.G5 CK01.132B.F6 Dmel_dig_003035_0704_2170 Dmel_dig_008313_0629_3589 Dmel_neb_008540_0581_1793 Dmel_neb_015346_0906_3218 Dmel_neb_016051_0578_0482 EC15050 EC051923 EK044036 EK046321 EK053253 EK072942 EK088207 EK093027 EK095155 EK103306 EK122233 EK127047 EK157742 EK197615 EK213550 EK228304 EK248453 EK252814 EK254831 EK266301 EK266755 EK296746 EK301143 EN03409 EN09338 EP02159 EP13449 EP15838 EP19435 FGC032G09 FGM221G05 FGM221G08 FGM307F03 FGM311A11 IP15294 IP15494 IP15594 LD41345 RP003142153 UUGC0466
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0051151 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42687
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: wge CG31151 (Katsuyama et al., 2005)
Source for database merge of	Source for merge of: CG17621 CG4902 (FlyBase, 1996-)
Additional comments	Annotations CG17621, CG4902 merged as CG31151 in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003) Source for merge of CG17621 CG4902 was a shared cDNA (date:010720). (FlyBase, 1996-)
Other Comments
	wge has a 345bp extension at the 5' end from the estimated translation initiation site of the associated EST LP24488. (Katsuyama et al., 2005)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_170037 NM_170038 NM_001043281 NM_001275918 RefSeq (Proteins) • NP_732790 NP_732791 NP_001036746 NP_001262847 DDBJ / EMBL / GenBank • AA440533 AAF56049 AAF56050 AAM49885 ABI31197 AGB96227 AW942347 AY118516 Entrez Gene - A searchable database of RefSeq genes. • 42687 UniProtKB/Swiss-Prot • Q3LHL9
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Bromo adjacent homology (BAH) domain (IPR001025)
Linkouts
	BioGRID - A database of protein and genetic interactions • 67637 DroID - A comprehensive database of gene and protein interactions. • FBgn0051151 DRSC - Results from RNAi screens. • FBgn0051151 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0051151 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31151-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0051151 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42687 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42687 modMine - Data generated by the modENCODE project. • FBgn0051151
Synonyms & Secondary IDs ( 5 )
Reported As
Symbol Synonym	CG4902   CG17621   CG31151 (Myrick et al., 2005.5.16, Philippakis et al., 2006) wge (Katsuyama et al., 2005, Katsuyama et al., 2005)
Name Synonym	winged eye (Katsuyama et al., 2005)
Secondary FlyBase IDs
	FBgn0039011 FBgn0039012
References ( 17 )
Research paper	Willis et al., 2010, J. Insect Sci. 10: 66 Microarray Analysis of Juvenile Hormone Response in Drosophila melanogaster S2 cells. [FBrf0211402] Philippakis et al., 2006, PLoS Comput. Biol. 2(5): e53 Expression-guided in silico evaluation of candidate cis regulatory codes for Drosophila muscle founder cells. [FBrf0193955] Katsuyama et al., 2005, Proc. Natl. Acad. Sci. U.S.A. 102(44): 15918--15923 Involvement of winged eye encoding a chromatin-associated bromo-adjacent homology domain protein in disc specification. [FBrf0191445]
Supplementary material	Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Katsuyama et al., 2005, Proc. Natl. Acad. Sci. USA 102(44): Supporting Information. [FBrf0195912] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Bellen, 2007.5.25, MB714.xml MB714.xml [FBrf0200402] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Myrick et al., 2005.5.16, Deletion Generator Project genomic insertion collection. Deletion Generator Project genomic insertion collection. [FBrf0188490] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file) Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
FlyBase analysis	FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946] FlyBase, 1992-, FlyBase curation. FlyBase curation. [FBrf0105495]
Curated genome annotation	FamiliarityBreedsContempt, 1999.11, [Automatic annotations performed at the Celera Jamboreee.] [Automatic annotations performed at the Celera Jamboreee.] [FBrf0126705]