• Home
• Tools
  • Tools Overview
  • Query Tools

    
    • QuickSearch
    • QueryBuilder
    • TermLink
    • CytoSearch
    • Interactions Browser
    • ImageBrowse
    • Find A Person
    • Google™ FlyBase
  • Genomic/Map Tools

    
    • BLAST
    • GBrowse
    • CytoSearch
    • Aberrations Maps
    • Chromosome Maps
    • Coordinates Converter
  • Retrieve/Convert

    
    • Batch Download
    • Coordinates Converter
    • ID Converter
  • Data Submission

    
    • Fast-Track Your Paper
    • Submit Personal Comm
    • Add A New Person
    • Update Person Info
  • People

    
    • Find A Person
    • Add A New Person
    • Update Person Info
• Files
  • Files Overview
  • Downloads:
  • Precomputed files
  • Archived data
  • Releases (FTP)
  • Genomes (FTP)
  • AAA data (FTP)
  • Lists:
  • Transposons (Dmel)
  • Transposons (other)
  • Vectors & Constructs
  • Anatomical Terms
  • Map Conversion
• Species
  • Phylogeny
  • Sequenced Species
  • Synteny Table
  • Color Illustrations
  • Abbreviations
• Documents
  • About FlyBase
  • Reference Manual:
  • Sections
  • Contents
  • Nomenclature
  • Release Notes
• Resources
  • All Resources
  • Model Organisms
  • Stock Collections
  • Other links:
  • BDGP
  • DGRC
  • FlyExpress
  • Interactive Fly
  • modENCODE
  • Textpresso for Fly
• News
  • News
  • FlyBase Forum
  • FlyBase Positions
  • Meetings
  • Courses
  • Fly Board
  • White papers
  • Funding
  • bionet.dros
• Help
  • Google™ FlyBase
  • Site Map
  • FAQs
  • FlyBase Guides
  • Video Tutorials
  • Report help
  • New to Flies
  • Pers. comm.
  • Author guidelines
  • Contact FlyBase
• Archives
  • Prior Release
  • Other Archives
  • Coordinate Converter

Gene Dmel\CG31176

General Information
Symbol	Dmel\CG31176	Species	D. melanogaster
Name		Annotation symbol	CG31176
Feature type	protein_coding_gene	FlyBase ID	FBgn0051176
Gene Model Status	Current	Stock availability	12 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	93F2-93F6	Sequence location	3R:17,498,018..17,545,380 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG31176 (FBgn0051176). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 15 alleles are reported. The phenotype of these alleles is annotated with: intersegmental nerve. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed during late pupal stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval hindgut. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, adult crop, adult hindgut, larval trachea, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1637788_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG31176. Gene sequence location is 3R:17498018..17545380.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN31042 HFA16021 HFA15038
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 93F2-93F6   Limits computationally determined from genome sequence between P{PZ}InR05545 and P{PZ}tsl00617
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG31176 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG31176-RA FBtr0084114  NM_169963   2516   460
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG31176-PA   FBpp0083513   47.9   460   10.67     NP_732650   AAF55909
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF55909   AI062859   AI062866   AQ073100   AY071506 AAL49128   BI369769   BT056250   CO279742   CO328881   CO330551   CZ467201   CZ467202   CZ468065   CZ468557   CZ468688   CZ468689   CZ468910   CZ469159   CZ485544   CZ487668   CZ487669   EC067511   EC072252   EC074384   EL879074
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8SYJ6 Q9VD89
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0051176    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0051176 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed during late pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0051176 expression level Developmental Stage   Expression Level embryo 00-02hr    11 embryo 02-04hr    3 embryo 04-06hr    2 embryo 06-08hr    15 embryo 08-10hr    35 embryo 10-12hr    102 embryo 12-14hr    158 embryo 14-16hr    627 embryo 16-18hr    807 embryo 18-20hr    1007 embryo 20-22hr    854 embryo 22-24hr    790 larva L1    1046 larva L2    706 larva L3 12hr old    713 larva L3 puffstage 1-2    200 larva L3 puffstage 3-6    237 larva L3 puffstage 7-9    485 white prepupae new    1323 white prepupae 12hr    207 white prepupae 24hr    189 pupae 2d postWPP    2821 pupae 3d postWPP    484 pupae 4d postWPP    713 adult male 01day    196 adult male 05day    179 adult male 30day    138 adult female 01day    116 adult female 05day    55 adult female 30day    63 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    11 embryo 02-04hr    3 embryo 04-06hr    2 embryo 06-08hr    15 embryo 08-10hr    35 embryo 10-12hr  102 embryo 12-14hr  (158) embryo 14-16hr  (627) embryo 16-18hr  (807) embryo 18-20hr  (1007) embryo 20-22hr  (854) embryo 22-24hr  (790) larva L1  (1046) larva L2  (706) larva L3 12hr old  (713) larva L3 puffstage 1-2  (200) larva L3 puffstage 3-6  (237) larva L3 puffstage 7-9  (485) white prepupae new  (1323) white prepupae 12hr  (207) white prepupae 24hr  (189) pupae 2d postWPP  (2821) pupae 3d postWPP  (484) pupae 4d postWPP  (713) adult male 01day  (196) adult male 05day  (179) adult male 30day  (138) adult female 01day  (116) adult female 05day    55 adult female 30day    63 Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    11 embryo 02-04hr    3 embryo 04-06hr    2 embryo 06-08hr    15 embryo 08-10hr    35 embryo 10-12hr    102 embryo 12-14hr    158 embryo 14-16hr    627 embryo 16-18hr    807 embryo 18-20hr    1007 embryo 20-22hr    854 embryo 22-24hr    790 larva L1    1046 larva L2    706 larva L3 12hr old    713 larva L3 puffstage 1-2    200 larva L3 puffstage 3-6    237 larva L3 puffstage 7-9    485 white prepupae new    1323 white prepupae 12hr    207 white prepupae 24hr    189 pupae 2d postWPP  (2821) pupae 3d postWPP    484 pupae 4d postWPP    713 adult male 01day    196 adult male 05day    179 adult male 30day    138 adult female 01day    116 adult female 05day    55 adult female 30day    63 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    11 embryo 02-04hr    3 embryo 04-06hr    2 embryo 06-08hr    15 embryo 08-10hr    35 embryo 10-12hr    102 embryo 12-14hr    158 embryo 14-16hr    627 embryo 16-18hr    807 embryo 18-20hr    1007 embryo 20-22hr    854 embryo 22-24hr    790 larva L1    1046 larva L2    706 larva L3 12hr old    713 larva L3 puffstage 1-2    200 larva L3 puffstage 3-6    237 larva L3 puffstage 7-9    485 white prepupae new    1323 white prepupae 12hr    207 white prepupae 24hr    189 pupae 2d postWPP    2821 pupae 3d postWPP    484 pupae 4d postWPP    713 adult male 01day    196 adult male 05day    179 adult male 30day    138 adult female 01day    116 adult female 05day    55 adult female 30day    63 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    11 embryo 02-04hr    3 embryo 04-06hr    2 embryo 06-08hr    15 embryo 08-10hr    35 embryo 10-12hr    102 embryo 12-14hr    158 embryo 14-16hr    627 embryo 16-18hr    807 embryo 18-20hr    1007 embryo 20-22hr    854 embryo 22-24hr    790 larva L1    1046 larva L2    706 larva L3 12hr old    713 larva L3 puffstage 1-2    200 larva L3 puffstage 3-6    237 larva L3 puffstage 7-9    485 white prepupae new    1323 white prepupae 12hr    207 white prepupae 24hr    189 pupae 2d postWPP    2821 pupae 3d postWPP    484 pupae 4d postWPP    713 adult male 01day    196 adult male 05day    179 adult male 30day    138 adult female 01day    116 adult female 05day    55 adult female 30day    63 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0051176 expression level Developmental Stage   Expression Level embryo 00-02hr    11 embryo 02-04hr    3 embryo 04-06hr    2 embryo 06-08hr    15 embryo 08-10hr    35 embryo 10-12hr    102 embryo 12-14hr    158 embryo 14-16hr    627 embryo 16-18hr    807 embryo 18-20hr    1007 embryo 20-22hr    854 embryo 22-24hr    790 larva L1    1046 larva L2    706 larva L3 12hr old    713 larva L3 puffstage 1-2    200 larva L3 puffstage 3-6    237 larva L3 puffstage 7-9    485 white prepupae new    1323 white prepupae 12hr    207 white prepupae 24hr    189 pupae 2d postWPP    2821 pupae 3d postWPP    484 pupae 4d postWPP    713 adult male 01day    196 adult male 05day    179 adult male 30day    138 adult female 01day    116 adult female 05day    55 adult female 30day    63 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    11 embryo 02-04hr    3 embryo 04-06hr    2 embryo 06-08hr    15 embryo 08-10hr    35 embryo 10-12hr  102 embryo 12-14hr  (158) embryo 14-16hr  (627) embryo 16-18hr  (807) embryo 18-20hr  (1007) embryo 20-22hr  (854) embryo 22-24hr  (790) larva L1  (1046) larva L2  (706) larva L3 12hr old  (713) larva L3 puffstage 1-2  (200) larva L3 puffstage 3-6  (237) larva L3 puffstage 7-9  (485) white prepupae new  (1323) white prepupae 12hr  (207) white prepupae 24hr  (189) pupae 2d postWPP  (2821) pupae 3d postWPP  (484) pupae 4d postWPP  (713) adult male 01day  (196) adult male 05day  (179) adult male 30day  138 adult female 01day  116 adult female 05day    55 adult female 30day    63 Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    11 embryo 02-04hr    3 embryo 04-06hr    2 embryo 06-08hr    15 embryo 08-10hr    35 embryo 10-12hr    102 embryo 12-14hr    158 embryo 14-16hr    627 embryo 16-18hr    807 embryo 18-20hr    1007 embryo 20-22hr    854 embryo 22-24hr    790 larva L1    1046 larva L2    706 larva L3 12hr old    713 larva L3 puffstage 1-2    200 larva L3 puffstage 3-6    237 larva L3 puffstage 7-9    485 white prepupae new    1323 white prepupae 12hr    207 white prepupae 24hr    189 pupae 2d postWPP  (2821) pupae 3d postWPP    484 pupae 4d postWPP    713 adult male 01day    196 adult male 05day    179 adult male 30day    138 adult female 01day    116 adult female 05day    55 adult female 30day    63 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    11 embryo 02-04hr    3 embryo 04-06hr    2 embryo 06-08hr    15 embryo 08-10hr    35 embryo 10-12hr    102 embryo 12-14hr    158 embryo 14-16hr    627 embryo 16-18hr    807 embryo 18-20hr    1007 embryo 20-22hr    854 embryo 22-24hr    790 larva L1    1046 larva L2    706 larva L3 12hr old    713 larva L3 puffstage 1-2    200 larva L3 puffstage 3-6    237 larva L3 puffstage 7-9    485 white prepupae new    1323 white prepupae 12hr    207 white prepupae 24hr    189 pupae 2d postWPP    2821 pupae 3d postWPP    484 pupae 4d postWPP    713 adult male 01day    196 adult male 05day    179 adult male 30day    138 adult female 01day    116 adult female 05day    55 adult female 30day    63 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    11 embryo 02-04hr    3 embryo 04-06hr    2 embryo 06-08hr    15 embryo 08-10hr    35 embryo 10-12hr    102 embryo 12-14hr    158 embryo 14-16hr    627 embryo 16-18hr    807 embryo 18-20hr    1007 embryo 20-22hr    854 embryo 22-24hr    790 larva L1    1046 larva L2    706 larva L3 12hr old    713 larva L3 puffstage 1-2    200 larva L3 puffstage 3-6    237 larva L3 puffstage 7-9    485 white prepupae new    1323 white prepupae 12hr    207 white prepupae 24hr    189 pupae 2d postWPP    2821 pupae 3d postWPP    484 pupae 4d postWPP    713 adult male 01day    196 adult male 05day    179 adult male 30day    138 adult female 01day    116 adult female 05day    55 adult female 30day    63 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0051176    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0051176 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval hindgut. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, adult crop, adult hindgut, larval trachea, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0051176 expression level Tissue   Expression Level Larval Central Nervous System    14.75 Larval Midgut    14.1 Larval Hindgut    1040.8 Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland    12.1 Larval Trachea    360.525 Larval Carcass    367.125 Adult Head    74.7 Adult Eye    151.325 Adult Brain    17.2 Adult Thoracic-Abdominal Ganglion no informative data Adult Crop    162.8 Adult Midgut no informative data Adult Hindgut    462.6 Adult Malpighian Tubules no informative data Adult Fat Body    14.4 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    27.3 Adult InseminatedFemale Spermatheca    45.2 Adult Ovary    13.2 Adult Testis    13.5 Adult Male Accessory Gland no informative data Adult Carcass    23.5 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    14.75 Larval Midgut    14.1 Larval Hindgut  (1040.8) Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland    12.1 Larval Trachea    360.525 Larval Carcass    367.125 Adult Head    74.7 Adult Eye    151.325 Adult Brain    17.2 Adult Thoracic-Abdominal Ganglion no informative data Adult Crop    162.8 Adult Midgut no informative data Adult Hindgut    462.6 Adult Malpighian Tubules no informative data Adult Fat Body    14.4 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    27.3 Adult InseminatedFemale Spermatheca    45.2 Adult Ovary    13.2 Adult Testis    13.5 Adult Male Accessory Gland no informative data Adult Carcass    23.5 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    14.75 Larval Midgut    14.1 Larval Hindgut  1040.8 Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland    12.1 Larval Trachea    360.525 Larval Carcass    367.125 Adult Head    74.7 Adult Eye    151.325 Adult Brain    17.2 Adult Thoracic-Abdominal Ganglion no informative data Adult Crop    162.8 Adult Midgut no informative data Adult Hindgut    462.6 Adult Malpighian Tubules no informative data Adult Fat Body    14.4 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    27.3 Adult InseminatedFemale Spermatheca    45.2 Adult Ovary    13.2 Adult Testis    13.5 Adult Male Accessory Gland no informative data Adult Carcass    23.5 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    14.75 Larval Midgut    14.1 Larval Hindgut    1040.8 Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland    12.1 Larval Trachea    360.525 Larval Carcass    367.125 Adult Head    74.7 Adult Eye    151.325 Adult Brain    17.2 Adult Thoracic-Abdominal Ganglion no informative data Adult Crop    162.8 Adult Midgut no informative data Adult Hindgut    462.6 Adult Malpighian Tubules no informative data Adult Fat Body    14.4 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    27.3 Adult InseminatedFemale Spermatheca    45.2 Adult Ovary    13.2 Adult Testis    13.5 Adult Male Accessory Gland no informative data Adult Carcass    23.5 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0051176 expression level Tissue   Expression Level Larval Central Nervous System    14.75 Larval Midgut    14.1 Larval Hindgut    1040.8 Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland    12.1 Larval Trachea    360.525 Larval Carcass    367.125 Adult Head    74.7 Adult Eye    151.325 Adult Brain    17.2 Adult Thoracic-Abdominal Ganglion no informative data Adult Crop    162.8 Adult Midgut no informative data Adult Hindgut    462.6 Adult Malpighian Tubules no informative data Adult Fat Body    14.4 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    27.3 Adult InseminatedFemale Spermatheca    45.2 Adult Ovary    13.2 Adult Testis    13.5 Adult Male Accessory Gland no informative data Adult Carcass    23.5 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    14.75 Larval Midgut    14.1 Larval Hindgut  (1040.8) Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland    12.1 Larval Trachea    360.525 Larval Carcass    367.125 Adult Head    74.7 Adult Eye    151.325 Adult Brain    17.2 Adult Thoracic-Abdominal Ganglion no informative data Adult Crop    162.8 Adult Midgut no informative data Adult Hindgut    462.6 Adult Malpighian Tubules no informative data Adult Fat Body    14.4 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    27.3 Adult InseminatedFemale Spermatheca    45.2 Adult Ovary    13.2 Adult Testis    13.5 Adult Male Accessory Gland no informative data Adult Carcass    23.5 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    14.75 Larval Midgut    14.1 Larval Hindgut  1040.8 Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland    12.1 Larval Trachea    360.525 Larval Carcass    367.125 Adult Head    74.7 Adult Eye    151.325 Adult Brain    17.2 Adult Thoracic-Abdominal Ganglion no informative data Adult Crop    162.8 Adult Midgut no informative data Adult Hindgut    462.6 Adult Malpighian Tubules no informative data Adult Fat Body    14.4 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    27.3 Adult InseminatedFemale Spermatheca    45.2 Adult Ovary    13.2 Adult Testis    13.5 Adult Male Accessory Gland no informative data Adult Carcass    23.5 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    14.75 Larval Midgut    14.1 Larval Hindgut    1040.8 Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland    12.1 Larval Trachea    360.525 Larval Carcass    367.125 Adult Head    74.7 Adult Eye    151.325 Adult Brain    17.2 Adult Thoracic-Abdominal Ganglion no informative data Adult Crop    162.8 Adult Midgut no informative data Adult Hindgut    462.6 Adult Malpighian Tubules no informative data Adult Fat Body    14.4 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    27.3 Adult InseminatedFemale Spermatheca    45.2 Adult Ovary    13.2 Adult Testis    13.5 Adult Male Accessory Gland no informative data Adult Carcass    23.5 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion no informative data Adult Crop     Adult Midgut no informative data Adult Hindgut     Adult Malpighian Tubules no informative data Adult Fat Body     Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland no informative data Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    74.7   NA  Eye    151.325   NA  Brain    17.2   14.75  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    no informative data   NA  Crop    162.8   14.1  Midgut    no informative data   1040.8  Hindgut    462.6   no informative data  Malpighian Tubules    no informative data   no informative data  Fat Body    14.4   12.1  Salivary Gland    no informative data   NA  Heart    no informative data   360.525  Trachea    NA   NA  VirginFemale Spermatheca    27.3   NA  InseminatedFemale Spermatheca    45.2   NA  Ovary    13.2   NA  Testis    13.5   NA  Male Accessory Gland    no informative data   367.125  Carcass    23.5 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_18
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0051176 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31176-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG31176GD10187 Phenotype manifest in Allele germline cell | male, with Scer\GAL4nos.UTR.T:Hsim\VP16 CG31176EP3662 intersegmental nerve, with Scer\GAL4elav-C155 CG31176EP3662
Classical Alleles ( 13 )
For All Classical Alleles Show
Allele of CG31176 Class Mutagen Stocks Known lesion CG311765-SZ-3937 1 -- CG31176c01482 piggyBac transposase 1 -- CG31176c02607 piggyBac transposase 1 -- CG31176c03278 piggyBac transposase 1 -- CG31176c03949 piggyBac transposase 1 -- CG31176c04305 piggyBac transposase 1 -- CG31176f02986 piggyBac transposase 1 -- CG31176f05063 piggyBac transposase 1 -- CG31176MB00700 1 -- CG31176MI01802 1 -- CG31176NP2190 1 -- CG31176c03504 piggyBac transposase 0 -- CG31176EP3662 P-element activity 0 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG31176 Class Mutagen Stocks Known lesion CG31176GD10187 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG31176KK111042 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6186 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD10187} NA P{KK111042} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG31176EP3662 NA miscellaneous insertions Mi{MIC}CG31176MI01802 NA P{RS5}CG311765-SZ-3937 NA P{SUPor-P}KG05782 NA PBac{PB}CG31176c01482 NA PBac{PB}CG31176c02607 NA PBac{PB}CG31176c03278 NA PBac{PB}CG31176c03504 NA PBac{PB}CG31176c03949 NA PBac{PB}CG31176c04305 NA PBac{WH}CG31176f02986 NA PBac{WH}CG31176f05063 NA insertion of enhancer trap binary system Mi{ET1}CG31176MB00700 No P{GawB}CG31176NP2190 No
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG31176 allele Gene References CG31176EP3662 pnr (Pena-Rangel et al., 2002)
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 67520 DroID - A comprehensive database of gene and protein interactions. • FBgn0051176 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42554
Orthologs
Genome-wide drosophilid orthologs	Dana\GF17807 Dere\GG14385 Dgri\GH17297 Dmoj\GI10262 Dper\GL21501 Dpse\GA16066 Dsec\GM10997 Dsim\GD19967 Dvir\GJ11068 Dwil\GK12073 Dyak\GE24966
Curated drosophilid orthologs	Dpse\GA16066
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AGAP002212-PA Anopheles gambiae (mosquito) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0214084 FBgn0198329 FBgn0159094 FBgn0124767
Stocks & Reagents
Stocks Listed in FlyBase ( 12 )
Bloomington	22875 y1 w67c23; Mi{ET1}CG31176MB00700 35073 y1 w*; Mi{MIC}CG31176MI01802/TM3, Sb1 Ser1
Harvard	- PBac{PB}CG31176c01482 - PBac{PB}CG31176c02607 - PBac{PB}CG31176c03278 - PBac{PB}CG31176c03949 - PBac{PB}CG31176c04305 - PBac{WH}CG31176f02986 - PBac{WH}CG31176f05063
Kyoto	126238 w1118; P{RS5}CG311765-SZ-3937 104121 w*; P{GawB}CG31176NP2190 / TM3, Sb1 Ser1
VDRC	v33782 w1118; P{GD10187}v33782
Genomic Clones ( 1 )
	BACR16N15 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 11 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE56061
Other clones	FI03584
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH02211 GH02219
Other clones	27967 60466 192818 EK135813 EK291605 EK295535 IP09013
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0051176 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42554
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG15495 CG6328 (FlyBase Genome Annotators, 2002-2003)
Additional comments	Annotations CG15495 and CG6328 merged as CG31176 in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_169963 RefSeq (Proteins) • NP_732650 DDBJ / EMBL / GenBank • AAF55909 AAL49128 AQ073100 AY071506 BI369769 CZ467201 CZ467202 CZ468065 CZ468557 CZ468688 CZ468689 CZ468910 CZ469159 CZ485544 CZ487668 CZ487669 Entrez Gene - A searchable database of RefSeq genes. • 42554 UniProtKB/TrEMBL • Q8SYJ6 Q9VD89
Other Crossreferences
Linkouts
	BioGRID - A database of protein and genetic interactions • 67520 DroID - A comprehensive database of gene and protein interactions. • FBgn0051176 DRSC - Results from RNAi screens. • FBgn0051176 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0051176 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31176-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0051176 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42554 InParanoid A subset of ortholog calls from InParanoid. • AGAP002212-PA Anopheles gambiae (mosquito) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42554 modMine - Data generated by the modENCODE project. • FBgn0051176 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0214084 FBgn0198329 FBgn0159094 FBgn0124767
Synonyms & Secondary IDs ( 7 )
Reported As
Symbol Synonym	CG6328 (Schulz et al., 2004, ) CG15495   CG31176 (Firth and Baker, 2007, Aerts et al., 2010, Keleman et al., 2009.8.5) EP3662   EP(3)3662 (Pena-Rangel et al., 2002) RE56061 (Pena-Rangel et al., 2002) unnamed (Kraut et al., 2001)
Name Synonym
Secondary FlyBase IDs
	FBgn0038895 FBgn0038896 FBgn0044453
References ( 19 )
Research paper	Aerts et al., 2010, PLoS Biol. 8(7): e1000435 Robust Target Gene Discovery through Transcriptome Perturbations and Genome-Wide Enhancer Predictions in Drosophila Uncovers a Regulatory Basis for Sensory Specification. [FBrf0211419] Firth and Baker, 2007, Dev. Biol. 307(2): 521--538 Spitz from the retina regulates genes transcribed in the second mitotic wave, peripodial epithelium, glia and plasmatocytes of the Drosophila eye imaginal disc. [FBrf0201413] Schulz et al., 2004, Genetics 167(2): 707--723 A misexpression screen reveals effects of bag-of-marbles and TGF beta class signaling on the Drosophila male germ-line stem cell lineage. [FBrf0179436] Pena-Rangel et al., 2002, Genetics 160(3): 1035--1050 A misexpression study examining dorsal thorax formation in Drosophila melanogaster. [FBrf0147055]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452] Kraut et al., 2001, Curr. Biol. 11(6): A gain-of-function screen for genes controlling motor axon guidance and synaptogenesis in Drosophila. [FBrf0135968]
Personal communication to FlyBase	Bellen, 2011.3.29, set930.xml set930.xml [FBrf0213349] Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bellen, 2006.10.16, MBinsertSet693.xml MBinsertSet693.xml [FBrf0191807] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955] FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]