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Gene Dmel\CG31717

General Information
Symbol	Dmel\CG31717	Species	D. melanogaster
Name		Annotation symbol	CG31717
Feature type	protein_coding_gene	FlyBase ID	FBgn0051717
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	31B1-31B1	Sequence location	2L:10,250,737..10,251,594 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG31717 (FBgn0051717). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: catalytic activity. The biological processes in which it is involved are not known. 2 alleles are reported. The phenotype of these alleles is annotated with: mesothoracic tergum. It has one annotated transcript and one annotated polypeptide. Protein features are: Phosphatidic acid phosphatase type 2/haloperoxidase; Phosphatidic acid phosphatase/chloroperoxidase, N-terminal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed during early pupal stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval midgut, larval Malpighian tubules, larval fat body. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1625710_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG31717. Gene sequence location is 2L:10250737..10251594.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	Sequence features BKN60645 BKN60359 BKN20330 HFA01121
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 31B1-31B1   Limits computationally determined from genome sequence between P{lacW}me31Bk06607 and P{PZ}nmd08774
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG31717 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG31717-RA FBtr0079977  NM_164902   790   204
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG31717-PA   FBpp0079567   23.0   204   9.52     NP_723543   AAN10729
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Phosphatidic acid phosphatase type 2/haloperoxidase (IPR000326) Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (IPR016118)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014134 AAN10729   AY075278 AAL68145   BG634055   BI353494   BI366664   BP548178   BP558378   BP558379   BQ102797   CA804783   CK661588   CO155532   CO183321   CO278554   CO321106   CO340568   EC198677   EC235858   EC250927   EC254526
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8T8T9
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0051717    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0051717 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed during early pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0051717 expression level Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    1736 embryo 04-06hr    1632 embryo 06-08hr    1961 embryo 08-10hr    2130 embryo 10-12hr    3322 embryo 12-14hr    1931 embryo 14-16hr    1083 embryo 16-18hr    1151 embryo 18-20hr    1033 embryo 20-22hr    772 embryo 22-24hr    984 larva L1    1054 larva L2    1477 larva L3 12hr old    1902 larva L3 puffstage 1-2    3261 larva L3 puffstage 3-6    5110 larva L3 puffstage 7-9    9869 white prepupae new    10454 white prepupae 12hr    3389 white prepupae 24hr    2505 pupae 2d postWPP    2271 pupae 3d postWPP    1898 pupae 4d postWPP    1590 adult male 01day    1978 adult male 05day    2180 adult male 30day    1710 adult female 01day    1657 adult female 05day    2083 adult female 30day    2207 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (2212) embryo 02-04hr  (1736) embryo 04-06hr  (1632) embryo 06-08hr  (1961) embryo 08-10hr  (2130) embryo 10-12hr  (3322) embryo 12-14hr  (1931) embryo 14-16hr  (1083) embryo 16-18hr  (1151) embryo 18-20hr  (1033) embryo 20-22hr  (772) embryo 22-24hr  (984) larva L1  (1054) larva L2  (1477) larva L3 12hr old  (1902) larva L3 puffstage 1-2  (3261) larva L3 puffstage 3-6  (5110) larva L3 puffstage 7-9  (9869) white prepupae new  (10454) white prepupae 12hr  (3389) white prepupae 24hr  (2505) pupae 2d postWPP  (2271) pupae 3d postWPP  (1898) pupae 4d postWPP  (1590) adult male 01day  (1978) adult male 05day  (2180) adult male 30day  (1710) adult female 01day  (1657) adult female 05day  (2083) adult female 30day  (2207) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (2212) embryo 02-04hr  (1736) embryo 04-06hr  (1632) embryo 06-08hr  (1961) embryo 08-10hr  (2130) embryo 10-12hr  (3322) embryo 12-14hr  (1931) embryo 14-16hr    1083 embryo 16-18hr    1151 embryo 18-20hr    1033 embryo 20-22hr    772 embryo 22-24hr    984 larva L1    1054 larva L2  1477 larva L3 12hr old  (1902) larva L3 puffstage 1-2  (3261) larva L3 puffstage 3-6  (5110) larva L3 puffstage 7-9  (9869) white prepupae new  (10454) white prepupae 12hr  (3389) white prepupae 24hr  (2505) pupae 2d postWPP  (2271) pupae 3d postWPP  (1898) pupae 4d postWPP  (1590) adult male 01day  (1978) adult male 05day  (2180) adult male 30day  (1710) adult female 01day  (1657) adult female 05day  (2083) adult female 30day  (2207) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    1736 embryo 04-06hr    1632 embryo 06-08hr    1961 embryo 08-10hr    2130 embryo 10-12hr    3322 embryo 12-14hr    1931 embryo 14-16hr    1083 embryo 16-18hr    1151 embryo 18-20hr    1033 embryo 20-22hr    772 embryo 22-24hr    984 larva L1    1054 larva L2    1477 larva L3 12hr old    1902 larva L3 puffstage 1-2    3261 larva L3 puffstage 3-6    5110 larva L3 puffstage 7-9    9869 white prepupae new  10454 white prepupae 12hr    3389 white prepupae 24hr    2505 pupae 2d postWPP    2271 pupae 3d postWPP    1898 pupae 4d postWPP    1590 adult male 01day    1978 adult male 05day    2180 adult male 30day    1710 adult female 01day    1657 adult female 05day    2083 adult female 30day    2207 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    1736 embryo 04-06hr    1632 embryo 06-08hr    1961 embryo 08-10hr    2130 embryo 10-12hr    3322 embryo 12-14hr    1931 embryo 14-16hr    1083 embryo 16-18hr    1151 embryo 18-20hr    1033 embryo 20-22hr    772 embryo 22-24hr    984 larva L1    1054 larva L2    1477 larva L3 12hr old    1902 larva L3 puffstage 1-2    3261 larva L3 puffstage 3-6    5110 larva L3 puffstage 7-9    9869 white prepupae new    10454 white prepupae 12hr    3389 white prepupae 24hr    2505 pupae 2d postWPP    2271 pupae 3d postWPP    1898 pupae 4d postWPP    1590 adult male 01day    1978 adult male 05day    2180 adult male 30day    1710 adult female 01day    1657 adult female 05day    2083 adult female 30day    2207 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0051717 expression level Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    1736 embryo 04-06hr    1632 embryo 06-08hr    1961 embryo 08-10hr    2130 embryo 10-12hr    3322 embryo 12-14hr    1931 embryo 14-16hr    1083 embryo 16-18hr    1151 embryo 18-20hr    1033 embryo 20-22hr    772 embryo 22-24hr    984 larva L1    1054 larva L2    1477 larva L3 12hr old    1902 larva L3 puffstage 1-2    3261 larva L3 puffstage 3-6    5110 larva L3 puffstage 7-9    9869 white prepupae new    10454 white prepupae 12hr    3389 white prepupae 24hr    2505 pupae 2d postWPP    2271 pupae 3d postWPP    1898 pupae 4d postWPP    1590 adult male 01day    1978 adult male 05day    2180 adult male 30day    1710 adult female 01day    1657 adult female 05day    2083 adult female 30day    2207 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (2212) embryo 02-04hr  (1736) embryo 04-06hr  (1632) embryo 06-08hr  (1961) embryo 08-10hr  (2130) embryo 10-12hr  (3322) embryo 12-14hr  (1931) embryo 14-16hr  (1083) embryo 16-18hr  (1151) embryo 18-20hr  (1033) embryo 20-22hr  (772) embryo 22-24hr  (984) larva L1  (1054) larva L2  (1477) larva L3 12hr old  (1902) larva L3 puffstage 1-2  (3261) larva L3 puffstage 3-6  (5110) larva L3 puffstage 7-9  (9869) white prepupae new  (10454) white prepupae 12hr  (3389) white prepupae 24hr  (2505) pupae 2d postWPP  (2271) pupae 3d postWPP  (1898) pupae 4d postWPP  (1590) adult male 01day  (1978) adult male 05day  (2180) adult male 30day  (1710) adult female 01day  (1657) adult female 05day  (2083) adult female 30day  (2207) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  2212 embryo 02-04hr  1736 embryo 04-06hr  1632 embryo 06-08hr  1961 embryo 08-10hr  2130 embryo 10-12hr  (3322) embryo 12-14hr  1931 embryo 14-16hr    1083 embryo 16-18hr    1151 embryo 18-20hr    1033 embryo 20-22hr    772 embryo 22-24hr    984 larva L1    1054 larva L2  1477 larva L3 12hr old  1902 larva L3 puffstage 1-2  (3261) larva L3 puffstage 3-6  (5110) larva L3 puffstage 7-9  (9869) white prepupae new  (10454) white prepupae 12hr  (3389) white prepupae 24hr  (2505) pupae 2d postWPP  2271 pupae 3d postWPP  1898 pupae 4d postWPP  1590 adult male 01day  1978 adult male 05day  2180 adult male 30day  1710 adult female 01day  1657 adult female 05day  2083 adult female 30day  2207 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    1736 embryo 04-06hr    1632 embryo 06-08hr    1961 embryo 08-10hr    2130 embryo 10-12hr    3322 embryo 12-14hr    1931 embryo 14-16hr    1083 embryo 16-18hr    1151 embryo 18-20hr    1033 embryo 20-22hr    772 embryo 22-24hr    984 larva L1    1054 larva L2    1477 larva L3 12hr old    1902 larva L3 puffstage 1-2    3261 larva L3 puffstage 3-6    5110 larva L3 puffstage 7-9    9869 white prepupae new  10454 white prepupae 12hr    3389 white prepupae 24hr    2505 pupae 2d postWPP    2271 pupae 3d postWPP    1898 pupae 4d postWPP    1590 adult male 01day    1978 adult male 05day    2180 adult male 30day    1710 adult female 01day    1657 adult female 05day    2083 adult female 30day    2207 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    1736 embryo 04-06hr    1632 embryo 06-08hr    1961 embryo 08-10hr    2130 embryo 10-12hr    3322 embryo 12-14hr    1931 embryo 14-16hr    1083 embryo 16-18hr    1151 embryo 18-20hr    1033 embryo 20-22hr    772 embryo 22-24hr    984 larva L1    1054 larva L2    1477 larva L3 12hr old    1902 larva L3 puffstage 1-2    3261 larva L3 puffstage 3-6    5110 larva L3 puffstage 7-9    9869 white prepupae new    10454 white prepupae 12hr    3389 white prepupae 24hr    2505 pupae 2d postWPP    2271 pupae 3d postWPP    1898 pupae 4d postWPP    1590 adult male 01day    1978 adult male 05day    2180 adult male 30day    1710 adult female 01day    1657 adult female 05day    2083 adult female 30day    2207 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0051717    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0051717 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval midgut, larval Malpighian tubules, larval fat body. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0051717 expression level Tissue   Expression Level Larval Central Nervous System    163.95 Larval Midgut    578.4 Larval Hindgut    297.9 Larval Malpighian Tubules    966.5 Larval Fat Body    677.2 Larval Salivary Gland    369.9 Larval Trachea    290.8 Larval Carcass    253.525 Adult Head    250.4 Adult Eye    283.6 Adult Brain    186.2 Adult Thoracic-Abdominal Ganglion    202.8 Adult Crop    234.5 Adult Midgut    424 Adult Hindgut    269.5 Adult Malpighian Tubules    313.9 Adult Fat Body    299.5 Adult Salivary Gland    424.4 Adult Heart    427.15 Adult VirginFemale Spermatheca    207.4 Adult InseminatedFemale Spermatheca    230.6 Adult Ovary    181.6 Adult Testis    184.5 Adult Male Accessory Gland    245.2 Adult Carcass    311.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    163.95 Larval Midgut  (578.4) Larval Hindgut    297.9 Larval Malpighian Tubules  (966.5) Larval Fat Body  (677.2) Larval Salivary Gland    369.9 Larval Trachea    290.8 Larval Carcass    253.525 Adult Head    250.4 Adult Eye    283.6 Adult Brain    186.2 Adult Thoracic-Abdominal Ganglion    202.8 Adult Crop    234.5 Adult Midgut    424 Adult Hindgut    269.5 Adult Malpighian Tubules    313.9 Adult Fat Body    299.5 Adult Salivary Gland    424.4 Adult Heart    427.15 Adult VirginFemale Spermatheca    207.4 Adult InseminatedFemale Spermatheca    230.6 Adult Ovary    181.6 Adult Testis    184.5 Adult Male Accessory Gland    245.2 Adult Carcass    311.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    163.95 Larval Midgut    578.4 Larval Hindgut    297.9 Larval Malpighian Tubules    966.5 Larval Fat Body    677.2 Larval Salivary Gland    369.9 Larval Trachea    290.8 Larval Carcass    253.525 Adult Head    250.4 Adult Eye    283.6 Adult Brain    186.2 Adult Thoracic-Abdominal Ganglion    202.8 Adult Crop    234.5 Adult Midgut    424 Adult Hindgut    269.5 Adult Malpighian Tubules    313.9 Adult Fat Body    299.5 Adult Salivary Gland    424.4 Adult Heart    427.15 Adult VirginFemale Spermatheca    207.4 Adult InseminatedFemale Spermatheca    230.6 Adult Ovary    181.6 Adult Testis    184.5 Adult Male Accessory Gland    245.2 Adult Carcass    311.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    163.95 Larval Midgut    578.4 Larval Hindgut    297.9 Larval Malpighian Tubules    966.5 Larval Fat Body    677.2 Larval Salivary Gland    369.9 Larval Trachea    290.8 Larval Carcass    253.525 Adult Head    250.4 Adult Eye    283.6 Adult Brain    186.2 Adult Thoracic-Abdominal Ganglion    202.8 Adult Crop    234.5 Adult Midgut    424 Adult Hindgut    269.5 Adult Malpighian Tubules    313.9 Adult Fat Body    299.5 Adult Salivary Gland    424.4 Adult Heart    427.15 Adult VirginFemale Spermatheca    207.4 Adult InseminatedFemale Spermatheca    230.6 Adult Ovary    181.6 Adult Testis    184.5 Adult Male Accessory Gland    245.2 Adult Carcass    311.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0051717 expression level Tissue   Expression Level Larval Central Nervous System    163.95 Larval Midgut    578.4 Larval Hindgut    297.9 Larval Malpighian Tubules    966.5 Larval Fat Body    677.2 Larval Salivary Gland    369.9 Larval Trachea    290.8 Larval Carcass    253.525 Adult Head    250.4 Adult Eye    283.6 Adult Brain    186.2 Adult Thoracic-Abdominal Ganglion    202.8 Adult Crop    234.5 Adult Midgut    424 Adult Hindgut    269.5 Adult Malpighian Tubules    313.9 Adult Fat Body    299.5 Adult Salivary Gland    424.4 Adult Heart    427.15 Adult VirginFemale Spermatheca    207.4 Adult InseminatedFemale Spermatheca    230.6 Adult Ovary    181.6 Adult Testis    184.5 Adult Male Accessory Gland    245.2 Adult Carcass    311.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    163.95 Larval Midgut  578.4 Larval Hindgut    297.9 Larval Malpighian Tubules  (966.5) Larval Fat Body  677.2 Larval Salivary Gland    369.9 Larval Trachea    290.8 Larval Carcass    253.525 Adult Head    250.4 Adult Eye    283.6 Adult Brain    186.2 Adult Thoracic-Abdominal Ganglion    202.8 Adult Crop    234.5 Adult Midgut    424 Adult Hindgut    269.5 Adult Malpighian Tubules    313.9 Adult Fat Body    299.5 Adult Salivary Gland    424.4 Adult Heart    427.15 Adult VirginFemale Spermatheca    207.4 Adult InseminatedFemale Spermatheca    230.6 Adult Ovary    181.6 Adult Testis    184.5 Adult Male Accessory Gland    245.2 Adult Carcass    311.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    163.95 Larval Midgut    578.4 Larval Hindgut    297.9 Larval Malpighian Tubules    966.5 Larval Fat Body    677.2 Larval Salivary Gland    369.9 Larval Trachea    290.8 Larval Carcass    253.525 Adult Head    250.4 Adult Eye    283.6 Adult Brain    186.2 Adult Thoracic-Abdominal Ganglion    202.8 Adult Crop    234.5 Adult Midgut    424 Adult Hindgut    269.5 Adult Malpighian Tubules    313.9 Adult Fat Body    299.5 Adult Salivary Gland    424.4 Adult Heart    427.15 Adult VirginFemale Spermatheca    207.4 Adult InseminatedFemale Spermatheca    230.6 Adult Ovary    181.6 Adult Testis    184.5 Adult Male Accessory Gland    245.2 Adult Carcass    311.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    163.95 Larval Midgut    578.4 Larval Hindgut    297.9 Larval Malpighian Tubules    966.5 Larval Fat Body    677.2 Larval Salivary Gland    369.9 Larval Trachea    290.8 Larval Carcass    253.525 Adult Head    250.4 Adult Eye    283.6 Adult Brain    186.2 Adult Thoracic-Abdominal Ganglion    202.8 Adult Crop    234.5 Adult Midgut    424 Adult Hindgut    269.5 Adult Malpighian Tubules    313.9 Adult Fat Body    299.5 Adult Salivary Gland    424.4 Adult Heart    427.15 Adult VirginFemale Spermatheca    207.4 Adult InseminatedFemale Spermatheca    230.6 Adult Ovary    181.6 Adult Testis    184.5 Adult Male Accessory Gland    245.2 Adult Carcass    311.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    250.4   NA  Eye    283.6   NA  Brain    186.2   163.95  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    202.8   NA  Crop    234.5   578.4  Midgut    424   297.9  Hindgut    269.5   966.5  Malpighian Tubules    313.9   677.2  Fat Body    299.5   369.9  Salivary Gland    424.4   NA  Heart    427.15   290.8  Trachea    NA   NA  VirginFemale Spermatheca    207.4   NA  InseminatedFemale Spermatheca    230.6   NA  Ovary    181.6   NA  Testis    184.5   NA  Male Accessory Gland    245.2   253.525  Carcass    311.9 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_23
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0051717 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31717-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | pupal stage, with Scer\GAL4pnr-MD237 CG31717GD1057 semi-lethal | pupal stage, with Scer\GAL4pnr-MD237 CG31717GD1057 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG31717GD1057 Phenotype manifest in Allele mesothoracic tergum, with Scer\GAL4pnr-MD237 CG31717GD1057
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG31717 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG31717 Class Mutagen Stocks Known lesion CG31717GD1057 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG31717KK100234 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel6026 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD1057} NA P{KK100234} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term Evidence References
catalytic activity inferred from electronic annotation with InterPro:IPR000326, InterPro:IPR016118 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
membrane inferred from electronic annotation with InterPro:IPR000326 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG31717 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0051717
Orthologs
Genome-wide drosophilid orthologs	Dana\GF15755 Dere\GG10096 Dgri\GH13360 Dmoj\GI17619 Dper\GL19163 Dpse\GA16419 Dsec\GM18048 Dsim\GD23668 Dvir\GJ18120 Dwil\GK19233 Dyak\GE18910
Curated drosophilid orthologs	Dpse\GA16419
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL008674-PA Aedes aegypti (mosquito) AGAP005824-PA Anopheles gambiae (mosquito) XP_624814.2 Apis mellifera (honey bee) XP_001948006.1 Acyrthosiphon pisum (pea aphid) XP_001948053.1 Acyrthosiphon pisum (pea aphid) At4g22550.1 Arabidopsis thaliana (wall cress) 226634 Branchiostoma floridae (lancelet) 246853 Branchiostoma floridae (lancelet) BGIBMGA003340-PA Bombyx mori (silk worm) ENSBTAP00000014674 Bos taurus (bovine) CN23455 Caenorhabditis brenneri (small nematode) CBP37554 Caenorhabditis briggsae (nematode) CE30454 Caenorhabditis elegans (worm) ENSCAFP00000003052 Canis familiaris (dog) ENSCINP00000017643 Ciona intestinalis (sea squirt) ENSCINP00000022132 Ciona intestinalis (sea squirt) CMQ127C Cyanidioschyzon merolae (red alga) CPIJ002087 Culex pipens (mosquito) ENSCPOP00000015857 Cavia porcellus (guinea pig) 937 Chlamidomonas reinhardtii (green alga) RP23366 Caenorhabditis remanei (nematode) ENSCSAVP00000006259 Ciona savignyi (sedentary tunicate) 151657 Capitella spl (polychaete worm) 231013 Daphnia pulex (daphnia) ENSDARP00000063881 Danio rerio (zebra fish) ENSDARP00000074783 Danio rerio (zebra fish) ENSECAP00000009165 Equus caballus (horse) ENSGACP00000019329 Gymnopilus aculeatus (mushroom) ENSGALP00000004784 Gallus gallus (chicken) 92061 Hypsipyla robusta (cedar shoot borer) ENSP00000371307 Homo sapiens (human) ISCW013934-PA Ixodes scapularis (deer tick) 84823 Lottia gigantea (owl limpet) ENSMODP00000027774 Monodelphis domestica (gray opossum) ENSMUSP00000047776 Mus musculus (house mouse) 25700 Nematostella vectensis (starlet anemone) XP_001607759.1 Nasonia vitripennis (wasp) ENSORLP00000018202 Oryzias latipes (japanese killifish) LOC_Os02g44290.1 Oryza sativa (asian rice) PHUM005091-PA Pediculus humanus (human body louse) 170866 Physcomitrella patens (moss) ENSPPYP00000021556 Pongo pygmaeus (orangutan) 76749 Phytophthora ramorum (sudden oak death pathogen) 130349 Phytophthora sojae (root rot pathogen) 554202 Populus trichocarpa (black cottonwood) ENSPTRP00000049496 Pan troglodytes (chimpanzee) ENSRNOP00000020475 Rattus norvegicus (norway rat) 5039000 Sorghum bicolor (sorghum) Smp_173120 Schistosoma mansoni (trematode parasite) 16815 Trichoplax adhaerens (metazoa) XP_972110.1 Tribolium castaneum (red flour beetle) ENSTNIP00000008601 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000042327 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000037798 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV10227 LH16565 LH24570 ISCW013934 ISCW013935 FBgn0236284 FBgn0221231 FBgn0205285 FBgn0195045 FBgn0172955 JGI_V11_231013 JGI_V11_319444 FBgn0076434 FBgn0156762 FBgn0140363 FBgn0120836 FBgn0102408 FBgn0092779 CPIJ002087 BGIBMGA003340 BGIBMGA003339 ACYPI008190 ACYPI006322 GB12734 AGAP005824 AAEL008674 PB20825 PHUM425010 GLEAN_03248
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
VDRC	v105379 P{KK100234}VIE-260B v7662 w1118; P{GD1057}v7662 v7663 w1118; P{GD1057}v7663
Genomic Clones ( 2 )
	BACR07H08 BACR30M19 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 17 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	AT30094
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GM23882 LP21188 RE52251
Other clones	17760 75311 211010 EC25458 EC254526 EK130351 EK290325 EN06251 EP10915 ESG0115a.B21_H09 FGH124H01 FGM314F04 UUGC0184
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0051717 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 318911
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG31717 BcDNA:AT30094 (FlyBase, 1996-)
Additional comments	Source for merge of CG31717 BcDNA:AT30094 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
	New annotation (CG31717) in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_164902 RefSeq (Proteins) • NP_723543 DDBJ / EMBL / GenBank • AAL68145 AAN10729 AY075278 BG634055 Entrez Gene - A searchable database of RefSeq genes. • 318911 UniProtKB/TrEMBL • Q8T8T9
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Phosphatidic acid phosphatase type 2/haloperoxidase (IPR000326) Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (IPR016118)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0051717 DRSC - Results from RNAi screens. • FBgn0051717 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0051717 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31717-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0051717 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 318911 InParanoid A subset of ortholog calls from InParanoid. • AAEL008674-PA Aedes aegypti (mosquito) AGAP005824-PA Anopheles gambiae (mosquito) XP_624814.2 Apis mellifera (honey bee) XP_001948006.1 Acyrthosiphon pisum (pea aphid) XP_001948053.1 Acyrthosiphon pisum (pea aphid) At4g22550.1 Arabidopsis thaliana (wall cress) 226634 Branchiostoma floridae (lancelet) 246853 Branchiostoma floridae (lancelet) BGIBMGA003340-PA Bombyx mori (silk worm) ENSBTAP00000014674 Bos taurus (bovine) CN23455 Caenorhabditis brenneri (small nematode) CBP37554 Caenorhabditis briggsae (nematode) CE30454 Caenorhabditis elegans (worm) ENSCAFP00000003052 Canis familiaris (dog) ENSCINP00000017643 Ciona intestinalis (sea squirt) ENSCINP00000022132 Ciona intestinalis (sea squirt) CMQ127C Cyanidioschyzon merolae (red alga) CPIJ002087 Culex pipens (mosquito) ENSCPOP00000015857 Cavia porcellus (guinea pig) 937 Chlamidomonas reinhardtii (green alga) RP23366 Caenorhabditis remanei (nematode) ENSCSAVP00000006259 Ciona savignyi (sedentary tunicate) 151657 Capitella spl (polychaete worm) 231013 Daphnia pulex (daphnia) ENSDARP00000063881 Danio rerio (zebra fish) ENSDARP00000074783 Danio rerio (zebra fish) ENSECAP00000009165 Equus caballus (horse) ENSGACP00000019329 Gymnopilus aculeatus (mushroom) ENSGALP00000004784 Gallus gallus (chicken) 92061 Hypsipyla robusta (cedar shoot borer) ENSP00000371307 Homo sapiens (human) ISCW013934-PA Ixodes scapularis (deer tick) 84823 Lottia gigantea (owl limpet) ENSMODP00000027774 Monodelphis domestica (gray opossum) ENSMUSP00000047776 Mus musculus (house mouse) 25700 Nematostella vectensis (starlet anemone) XP_001607759.1 Nasonia vitripennis (wasp) ENSORLP00000018202 Oryzias latipes (japanese killifish) LOC_Os02g44290.1 Oryza sativa (asian rice) PHUM005091-PA Pediculus humanus (human body louse) 170866 Physcomitrella patens (moss) ENSPPYP00000021556 Pongo pygmaeus (orangutan) 76749 Phytophthora ramorum (sudden oak death pathogen) 130349 Phytophthora sojae (root rot pathogen) 554202 Populus trichocarpa (black cottonwood) ENSPTRP00000049496 Pan troglodytes (chimpanzee) ENSRNOP00000020475 Rattus norvegicus (norway rat) 5039000 Sorghum bicolor (sorghum) Smp_173120 Schistosoma mansoni (trematode parasite) 16815 Trichoplax adhaerens (metazoa) XP_972110.1 Tribolium castaneum (red flour beetle) ENSTNIP00000008601 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000042327 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000037798 Xenopus tropicalis (frog) modMine - Data generated by the modENCODE project. • FBgn0051717 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV10227 LH16565 LH24570 ISCW013934 ISCW013935 FBgn0236284 FBgn0221231 FBgn0205285 FBgn0195045 FBgn0172955 JGI_V11_231013 JGI_V11_319444 FBgn0076434 FBgn0156762 FBgn0140363 FBgn0120836 FBgn0102408 FBgn0092779 CPIJ002087 BGIBMGA003340 BGIBMGA003339 ACYPI008190 ACYPI006322 GB12734 AGAP005824 AAEL008674 PB20825 PHUM425010 GLEAN_03248
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	BcDNA:AT30094   CG31717 (Keleman et al., 2009.8.5) Css2 (Huitema et al., 2004)
Name Synonym
Secondary FlyBase IDs
	FBgn0061440
References ( 11 )
Research paper	Huitema et al., 2004, EMBO J. 23(1): 33--44 Identification of a family of animal sphingomyelin synthases. [FBrf0179030]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]