FlyBase Gene Report: Dmel\RluA-1

General Information

Symbol

Dmel\RluA-1

Species

D. melanogaster

Name

RluA pseudouridine synthase 1

Annotation Symbol

CG31719

Feature Type

protein_coding_gene

FlyBase ID

FBgn0051719

Gene Model Status

Current

Stock Availability

6 publicly available

Gene Summary

RluA pseudouridine synthase 1 (RluA-1) encodes a pseudouridine synthase, an enzyme catalyzing the formation of the most abundant nucleoside modification of RNA, pseudouridine. [Date last reviewed: 2019-03-14] (FlyBase Gene Snapshot)

All Summaries

Gene Snapshot
Alliance
Auto summary
Gene Group
Interactive Fly

Also Known As

RluA1, multiple

Key Links

Genomic Location

Cytogenetic map

31E6-31F1

Sequence location

2L:10,463,340..10,474,349 [-]

Recombination map

2-42

RefSeq locus

NT_033779 REGION:10463340..10474349

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse GBrowse

Help me choose

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

GO Summary Ribbons

Gene Ontology (GO) Annotations (3 terms)

Molecular Function (2 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

enables pseudouridine synthase activity

inferred from biological aspect of ancestor with PANTHER:PTN001311753

(assigned by GO_Central )

(Gaudet et al., 2011)

enables RNA binding

inferred from electronic annotation with InterPro:IPR006145, InterPro:IPR006224, InterPro:IPR006225, InterPro:IPR020103

(assigned by InterPro )

(FlyBase Curators et al., 2004-)

Biological Process (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

involved_in enzyme-directed rRNA pseudouridine synthesis

inferred from biological aspect of ancestor with PANTHER:PTN001311753

(assigned by GO_Central )

(Gaudet et al., 2011)

Cellular Component (0 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (0 terms)

Gene Group (FlyBase)

PSEUDOURIDINE SYNTHASES

Protein Family (UniProt)

Protein Signatures (InterPro)

Summaries

Gene Snapshot

Gene Group (FlyBase)

PSEUDOURIDINE SYNTHASES -: Pseudouridine synthases catalyze the site-specific isomerization of uridine residues that are already part of an RNA chain, which is the most abundant post-transcriptional modification of cellular RNAs. Their activity is specific for a particular RNA (e.g. tRNA or rRNA class). They can be classified into five families named after the E. coli enzymes RluA, RsuA, TruA, TruB, and TruD. (Adapted from PMID:17113994.)

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\RluA-1 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure New Section

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry Q9VKV0)

If you don't see the viewer to the right, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Comments on Gene Model

Annotated transcripts do not represent all supported alternative splices within 5' UTR.

Low-frequency RNA-Seq exon junction(s) not annotated.

Alternative translation stop created by use of multiphasic reading frames within coding region.

Gene model reviewed during 5.48

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

RluA-1-RA

FBtr0080039

NM_164930

3073

739

RluA-1-RB

FBtr0080040

NM_164931

3207

739

RluA-1-RC

FBtr0080041

NM_164932

2914

739

RluA-1-RD

FBtr0337008

NM_001273422

2715

378

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

RluA-1-PA

FBpp0079629

82.3

739

7.70

NP_723592

AAF52959

RluA-1-PB

FBpp0079630

82.3

739

7.70

NP_723593

AAF52960

RluA-1-PC

FBpp0079631

82.3

739

7.70

NP_723594

AAN10755

RluA-1-PD

FBpp0307937

41.4

378

9.50

NP_001260351

AGB92886

Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

739 aa isoforms: RluA-1-PA, RluA-1-PB, RluA-1-PC

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\RluA-1 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

RluA-1_1

Linkouts

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 14

dorsal pharyngeal muscle cell

(Wang et al., 2011)

embryonic stage 16 -- 17

neuron of embryonic/larval peripheral nervous system

(Wang et al., 2011)

embryonic/larval dorsal vessel

(Wang et al., 2011)

Additional Descriptive Data

At embryonic stage 14, RluA-1 is expressed in cells that appear iteratively in peripheral tissues and in dorsal pharyngeal muscle. At stage 17, it is observed in PNS neurons and in the dorsal vessel but not in the CNS.

(Wang et al., 2011)

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

immunolocalization

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 16

multidendritic neuron

(Wang et al., 2011)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

Expression Deduced from Reporters

Reporter: Mi{PT-GFSTF.0}RluA-1^{MI06897-GFSTF.0}

Stage

Tissue/Position (including subcellular localization)

Reference

third instar larval stage

external sensory organ

(Song et al., 2020)

abdominal dorsal bipolar neuron dbp

(Song et al., 2020)

larval abdominal dorsal multidendritic neuron dda1

(Song et al., 2020)

larval dorsal multidendritic neuron ddaD

(Song et al., 2020)

larval dorsal multidendritic neuron ddaE

(Song et al., 2020)

larval dorsal multidendritic neuron ddaB

(Song et al., 2020)

larval dorsal multidendritic neuron ddaA

(Song et al., 2020)

larval dorsal multidendritic neuron ddaF

(Song et al., 2020)

larval dorsal multidendritic neuron ddaC

(Song et al., 2020)

adult stage

adult central brain | restricted

(Song et al., 2020)

adult optic lobe

(Song et al., 2020)

Reporter: Mi{Trojan-GAL4.0}RluA-1^{MI06897-TG4.0}

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult central brain | restricted

(Song et al., 2020)

adult optic lobe

(Song et al., 2020)

Reporter: P{RluA1-GAL4.JN}

Stage

Tissue/Position (including subcellular localization)

Reference

larval stage

dendritic arborizing neuron

(Jinushi-Nakao et al., 2007)

eo neuron | subset

(Jinushi-Nakao et al., 2007)

third instar larval stage

larval multidendritic neuron

(Karim and Moore, 2011)

wandering third instar larval stage

dendritic arborizing neuron

(Yalgin et al., 2015)

adult stage

abdominal dorsal multidendritic neuron ddaC

(Shimono et al., 2009)

abdominal dorsal multidendritic neuron ddaE

(Shimono et al., 2009)

larval abdominal lateral multidendritic neuron ldaA

(Shimono et al., 2009)

abdominal anterior ventral multidendritic neuron vdaa

(Shimono et al., 2009)

adult abdominal lateral multidendritic neuron ldaA-like

(Shimono et al., 2009)

Reporter: P{RluA-1-GAL4.Rluv3}

Stage

Tissue/Position (including subcellular localization)

Reference

larval stage

dendritic arborizing neuron

(Yalgin et al., 2015)

larval multidendritic class I neuron

(Yalgin et al., 2015)

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\RluA-1 in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\RluA-1

View exonic expression by tissue for Dmel\RluA-1

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0051719

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

34438/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0051719

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0051719

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0051719

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG31719

Flygut - An atlas of the Drosophila adult midgut

FBgn0051719

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 9 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 6 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of RluA-1

Transgenic constructs containing regulatory region of RluA-1

Aberrations (Deficiencies and Duplications) ( 2 )

Inferred from experimentation ( 2 )

Gene disrupted in

Df(2L)Exel7048

(Song et al., 2020, Ryder, 2004.4.26)

Dp(2;3)GV-CH321-49P21

(Song et al., 2020)

Inferred from location ( 0 )

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

viable

RluA-1^EY13178

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

RluA-1^GD10341

viable, with Scer\GAL4^Mef2.PR

RluA-1^GD10341

viable, with Scer\GAL4^pnr-MD237

RluA-1^GD10341

viable, with Scer\GAL4^tin.CΔ4

RluA-1^GD10341

Sterility

Allele

fertile

RluA-1^EY13178

Other Phenotypes

Allele

abnormal neuroanatomy | larval stage

RluA-1^del-HDR

abnormal pain response | larval stage

RluA-1^del-HDR

abnormal pain response | larval stage, with Scer\GAL4^ppk.1.9

RluA-1^NIG.31719R

abnormal pain response | larval stage (with RluA-1^del-FRT)

RluA-1^del-HDR

abnormal pain response | larval stage (with RluA-1^del-HDR)

RluA-1^del-FRT

Phenotype manifest in

Allele

dendritic branch | increased number | larval stage

RluA-1^del-HDR

larval dorsal multidendritic neuron ddaC

RluA-1^del-HDR

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v8.0)

Homo sapiens (Human) (4)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\RPUSD2

12 of 15

Yes

Hsap\RPUSD1

1 of 15

Yes

Hsap\RPUSD3

1 of 15

Yes

Hsap\RPUSD4

1 of 15

Yes

Model Organism Orthologs (via DIOPT v8.0)

Mus musculus (laboratory mouse) (4)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Rpusd2

11 of 15

Yes

Mmus\Rpusd1

2 of 15

Yes

Mmus\Rpusd3

1 of 15

Yes

Mmus\Rpusd4

1 of 15

Yes

Rattus norvegicus (Norway rat) (5)

Rnor\LOC100911166

11 of 13

Yes

Rnor\Rpusd2

5 of 13

Yes

Rnor\Rpusd1

2 of 13

Yes

Rnor\Rpusd3

1 of 13

Yes

Rnor\Rpusd4

1 of 13

Yes

Xenopus tropicalis (Western clawed frog) (3)

Xtro\rpusd2

8 of 12

Yes

Xtro\rpusd1

1 of 12

Yes

Xtro\rpusd3

1 of 12

Yes

Danio rerio (Zebrafish) (3)

Drer\rpusd2

8 of 15

Yes

Drer\rpusd1

2 of 15

Yes

Drer\rpusd4

1 of 15

Yes

Caenorhabditis elegans (Nematode, roundworm) (1)

Cele\K07E8.7

13 of 15

Yes

Arabidopsis thaliana (thale-cress) (2)

Atha\AT5G51140

8 of 9

Yes

Atha\AT1G76050

1 of 9

Yes

Saccharomyces cerevisiae (Brewer's yeast) (4)

Scer\PUS9

11 of 15

Yes

Scer\RIB2

11 of 15

Yes

Scer\PUS6

5 of 15

Yes

Scer\PUS5

1 of 15

Yes

Schizosaccharomyces pombe (Fission yeast) (1)

Spom\SPAC18B11.02c

9 of 12

Yes

Other Organism Orthologs (via OrthoDB)

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v8.0)

Drosophila melanogaster (Fruit fly) (1)

Gene Symbol

Score

Source

Alignment

8 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

RPUSD2; RNA pseudouridine synthase domain containing 2

12 of 15

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

RluA-1 - trv

two hybrid

(Hu et al., 2017.6.13)

Summary of Genetic Interactions

esyN Network Diagram

esyN Network Key:

Suppression

Enhancement

View in Interactions Browser

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

RluA-1

suppressible

RluA-2

(Song et al., 2020)

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0051719

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

External Data

Linkouts

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

2-42

Cytogenetic map

31E6-31F1

Sequence location

2L:10,463,340..10,474,349 [-]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

31E6-31F1

Limits computationally determined from genome sequence between P{lacW}KdelR^k00311 and P{lacW}l(2)k09116^k09116&P{lacW}Fatp^k10307

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

2-42

(FlyBase, 2016)

2-35.5

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (6)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

42194

y¹ w^*; Mi{MIC}RluA-1^MI06897

61043

y¹ w^*; Mi{MIC}RluA-1^MI15411

21409

y¹ w^67c23; P{EPgy2}RluA-1^EY13178

89936

w¹¹¹⁸; Dp(2;3)GV-CH321-49P21, PBac{GV-CH321-49P21}VK00031/TM3, Sb¹

VDRC

v109586

P{KK107880}VIE-260B

v41757

w¹¹¹⁸; P{GD10341}v41757

Genomic Clones (20)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (63)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

RH45372

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0051719

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0051719

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

34438

Antibody Information

Laboratory Generated Antibodies

polyclonal

(Wang et al., 2011)

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: RluA-1 CG31719

(Chien, 2003.3.19)

Source for database merge of

Source for merge of: CG13143 CG7475

(FlyBase Genome Annotators, 2002-2003)

Additional comments

Annotations CG13143 and CG7475 merged as CG31719 in release 3 of the genome annotation.

(Chien, 2003.3.19, FlyBase Genome Annotators, 2002-2003)

"CG13143" may correspond to "Scim16". Sequence analysis off ends of P{SUPor-P} in Scim insertion mutant places "Scim16" near/in "CG13143" or "CG6187".

(Dobie and Karpen, 2001.4.18)

Other Comments

Mutations in RluA-1 do not affect the morphology of multiple dendritic neurons. Misexpression of RluA-1 results in abnormal bristles on the adult notum.

(Huang et al., 2003)

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 45 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

34438

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

Q9VKV0

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

Q9VKV0

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0051719

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0051719

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

34438/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0051719

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

RluA-1_1

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0051719

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0051719

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG31719

Flygut - An atlas of the Drosophila adult midgut

FBgn0051719

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

34438

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC014142

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG31719

MARRVEL_MODEL - MARRVEL (model organism gene)

34438

modMine - A data warehouse for the modENCODE project

FBgn0051719

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0051719

DRSC - Results frm RNAi screens

FBgn0051719

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0051719

FlyMine - An integrated database for Drosophila genomics

FBgn0051719

Synonyms and Secondary IDs (7)

Reported As

Symbol Synonym

CG13143

CG31719

(Hosono et al., 2015, Keleman et al., 2009.8.5, Metaxakis et al., 2005, Chien, 2003.3.19, FlyBase Genome Annotators, 2002-2003, Dobie and Karpen, 2001.4.18)

CG7475

RluA-1

(Kurmangaliyev et al., 2020, Song et al., 2020, Hall et al., 2019, Wang et al., 2018, Hu et al., 2017.6.13, Dezi et al., 2016, Cole et al., 2012.7.6, Izutsu et al., 2012, Japanese National Institute of Genetics, 2012.5.21, Takahashi et al., 2012, Wang et al., 2011, Nicholson et al., 2008, Greene et al., 2005)

RluA1

(Yalgin et al., 2015, Blanchard et al., 2014)

Name Synonyms

RluA pseudouridine synthase 1

RluA-1

multiple

(Chien, 2003.3.19, Huang et al., 2003)

Secondary FlyBase IDs

FBgn0032254
FBgn0032255

Datasets (6)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (6)

Result

Result Type

Title

scRNAseq_2020_Cho_NI72LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from non-infested larvae at 72 h after egg-laying

scRNAseq_2020_Cho_NI96LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from non-infested larvae at 96 h after egg-laying

scRNAseq_2020_Cho_NI120LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from non-infested larvae at 120 h after egg-laying

scRNAseq_2020_Cho_WI96LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from wasp-infested larvae at 96 h after egg-laying

scRNAseq_2020_Cho_NI96HL_seq_clustering

cell clustering analysis

Clustering analysis of circulating hemocytes from non-infested larvae at 96 h after egg-laying

scRNAseq_2020_Cho_NI120HL_seq_clustering

cell clustering analysis

Clustering analysis of circulating hemocytes from non-infested larvae at 120 h after egg-laying

References (51)

The following external sites may use different assemblies or annotations than FlyBase.

Report Sections