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Gene Dmel\CG32043

General Information
Symbol	Dmel\CG32043	Species	D. melanogaster
Name		Annotation symbol	CG32043
Feature type	protein_coding_gene	FlyBase ID	FBgn0052043
Gene Model Status	Current	Stock availability	13 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	67B8-67B9	Sequence location	3L:9,454,150..9,465,690 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG32043 (FBgn0052043). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 18 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult ovary. Comments on Affy2 ProbeSet: ProbeSet 1633611_s_at completely aligns to an exonic region of only a subset of 3 of the 4 FlyBase-annotated transcript isoforms of CG32043. Gene sequence location is 3L:9454150..9465690.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 67B8-67B9   Limits computationally determined from genome sequence between P{EP}Hsp26EP3336&P{EP}Hsp26EP3315 and P{PZ}fry02240
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG32043 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.46 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG32043-RA FBtr0076466  NM_140064   5029   783 CG32043-RB FBtr0076465  NM_168346   4766   783 CG32043-RC FBtr0114367  NM_001144455   3263   783 CG32043-RE FBtr0333854  NM_001144456   3089   783
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG32043-PA   FBpp0076194   82.7   783   7.88     NP_648321   AAF50261 CG32043-PB   FBpp0076193   82.7   783   7.88     NP_729500   AAF50260 CG32043-PC   FBpp0112916   82.7   783   7.88     NP_001137927   ACL83282 CG32043-PE   FBpp0305987   82.7   783   7.88     NP_001137928   ACL83283
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA202259   AA391736   AA439343   AA540735   AA695272   AA816576   AA820861   AE014296 AAF50260   AE014296 AAF50261   AE014296 ACL83282   AE014296 ACL83283   AI260659   AI512340   AI513054   AI515864   AI945157   AQ073101   AW942290   AW943702   AW943774   AX094244   AX094303   AY060433 AAL25472   AY069429 AAL39574   AY118340 AAM48369   BG637737   BG637995   BG638416   BH256458   BH256459   BI167799   BI230368   BI235305   BI371587   BT126140   CO179391   CO190892   CO266422   CO267249   CO268317   CO273420   CO273799   CO273800   CO273801   CO274751   CO275131   CO276077   CO282609   CO283336   CO284640   CO286903   CO287721   CO288663   CO289271   CO290403   CO297835   CO299521   CO300994   CO305265   CO305896   CO307917   CO320028   CO323157   CO324584   CO325730   CO325881   CZ468007   CZ473571   CZ479135   CZ479136   CZ480895   EC060639   EC060662   EC062501   EC063498   EC070492   EC071067   EC071967   EC071968   EC073671   EC080937   EC085571   EC086125   EC088694   EC088857   EC198022   EC199610   EC203682   EC209347   EC215951   EC218899   EC220342   EC222017   EC224315   EC232473   EC235660   EC236916   EC237782   EC248041   EC251660   EC255562   EV586245   EV586462   EV586474   EV586485   EV586530   EV586807   EV586959   EV587311   EV587492   EV587535   EV588126   EV588364   EV590342   EV591297   EV591476   EV591744   GH966859   GH967166   GH967340   GH969581   GH972132   GH973449   GH974408   GH976726   GH981495
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q0E8G5 Q95SY1 B7Z0F8 Q8MT74 Q8T0B3
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism | subset   (Fisher et al., 2012) embryonic stage 7 -- 8   head mesoderm   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) trunk mesoderm   (Fisher et al., 2012) embryonic stage 9 -- 10   head mesoderm   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) trunk mesoderm   (Fisher et al., 2012) embryonic stage 11 -- 12   dorsal pharyngeal muscle primordium   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) somatic muscle primordium   (Fisher et al., 2012) Comment:reported as muscle system primordium visceral muscle primordium   (Fisher et al., 2012) Comment:reported as muscle system primordium trunk mesoderm   (Fisher et al., 2012) embryonic stage 13 -- 16   embryonic brain   (Fisher et al., 2012) embryonic/larval muscle system   (Fisher et al., 2012) embryonic/larval nervous system   (Fisher et al., 2012) embryonic/larval somatic muscle   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) ventral nerve cord   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult ovary. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    256.05 Larval Midgut    26.7 Larval Hindgut    29.4 Larval Malpighian Tubules    8.4 Larval Fat Body    13.9 Larval Salivary Gland    31.7 Larval Trachea    34.95 Larval Carcass    59.95 Adult Head    62 Adult Eye    53 Adult Brain    125.8 Adult Thoracic-Abdominal Ganglion    141.8 Adult Crop    71.9 Adult Midgut    19.4 Adult Hindgut    43.4 Adult Malpighian Tubules    8.8 Adult Fat Body    25.6 Adult Salivary Gland    18.4 Adult Heart    31.45 Adult VirginFemale Spermatheca    17.9 Adult InseminatedFemale Spermatheca    18.1 Adult Ovary    350.1 Adult Testis    76.4 Adult Male Accessory Gland    29.2 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    256.05 Larval Midgut    26.7 Larval Hindgut    29.4 Larval Malpighian Tubules    8.4 Larval Fat Body    13.9 Larval Salivary Gland    31.7 Larval Trachea    34.95 Larval Carcass    59.95 Adult Head    62 Adult Eye    53 Adult Brain    125.8 Adult Thoracic-Abdominal Ganglion    141.8 Adult Crop    71.9 Adult Midgut    19.4 Adult Hindgut    43.4 Adult Malpighian Tubules    8.8 Adult Fat Body    25.6 Adult Salivary Gland    18.4 Adult Heart    31.45 Adult VirginFemale Spermatheca    17.9 Adult InseminatedFemale Spermatheca    18.1 Adult Ovary    350.1 Adult Testis    76.4 Adult Male Accessory Gland    29.2 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    256.05 Larval Midgut    26.7 Larval Hindgut    29.4 Larval Malpighian Tubules    8.4 Larval Fat Body    13.9 Larval Salivary Gland    31.7 Larval Trachea    34.95 Larval Carcass    59.95 Adult Head    62 Adult Eye    53 Adult Brain    125.8 Adult Thoracic-Abdominal Ganglion    141.8 Adult Crop    71.9 Adult Midgut    19.4 Adult Hindgut    43.4 Adult Malpighian Tubules    8.8 Adult Fat Body    25.6 Adult Salivary Gland    18.4 Adult Heart    31.45 Adult VirginFemale Spermatheca    17.9 Adult InseminatedFemale Spermatheca    18.1 Adult Ovary    350.1 Adult Testis    76.4 Adult Male Accessory Gland    29.2 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    256.05 Larval Midgut    26.7 Larval Hindgut    29.4 Larval Malpighian Tubules    8.4 Larval Fat Body    13.9 Larval Salivary Gland    31.7 Larval Trachea    34.95 Larval Carcass    59.95 Adult Head    62 Adult Eye    53 Adult Brain    125.8 Adult Thoracic-Abdominal Ganglion    141.8 Adult Crop    71.9 Adult Midgut    19.4 Adult Hindgut    43.4 Adult Malpighian Tubules    8.8 Adult Fat Body    25.6 Adult Salivary Gland    18.4 Adult Heart    31.45 Adult VirginFemale Spermatheca    17.9 Adult InseminatedFemale Spermatheca    18.1 Adult Ovary    350.1 Adult Testis    76.4 Adult Male Accessory Gland    29.2 Adult Carcass    62.9 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    256.05 Larval Midgut    26.7 Larval Hindgut    29.4 Larval Malpighian Tubules    8.4 Larval Fat Body    13.9 Larval Salivary Gland    31.7 Larval Trachea    34.95 Larval Carcass    59.95 Adult Head    62 Adult Eye    53 Adult Brain    125.8 Adult Thoracic-Abdominal Ganglion    141.8 Adult Crop    71.9 Adult Midgut    19.4 Adult Hindgut    43.4 Adult Malpighian Tubules    8.8 Adult Fat Body    25.6 Adult Salivary Gland    18.4 Adult Heart    31.45 Adult VirginFemale Spermatheca    17.9 Adult InseminatedFemale Spermatheca    18.1 Adult Ovary    350.1 Adult Testis    76.4 Adult Male Accessory Gland    29.2 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    256.05 Larval Midgut    26.7 Larval Hindgut    29.4 Larval Malpighian Tubules    8.4 Larval Fat Body    13.9 Larval Salivary Gland    31.7 Larval Trachea    34.95 Larval Carcass    59.95 Adult Head    62 Adult Eye    53 Adult Brain    125.8 Adult Thoracic-Abdominal Ganglion    141.8 Adult Crop    71.9 Adult Midgut    19.4 Adult Hindgut    43.4 Adult Malpighian Tubules    8.8 Adult Fat Body    25.6 Adult Salivary Gland    18.4 Adult Heart    31.45 Adult VirginFemale Spermatheca    17.9 Adult InseminatedFemale Spermatheca    18.1 Adult Ovary    350.1 Adult Testis    76.4 Adult Male Accessory Gland    29.2 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    256.05 Larval Midgut    26.7 Larval Hindgut    29.4 Larval Malpighian Tubules    8.4 Larval Fat Body    13.9 Larval Salivary Gland    31.7 Larval Trachea    34.95 Larval Carcass    59.95 Adult Head    62 Adult Eye    53 Adult Brain    125.8 Adult Thoracic-Abdominal Ganglion    141.8 Adult Crop    71.9 Adult Midgut    19.4 Adult Hindgut    43.4 Adult Malpighian Tubules    8.8 Adult Fat Body    25.6 Adult Salivary Gland    18.4 Adult Heart    31.45 Adult VirginFemale Spermatheca    17.9 Adult InseminatedFemale Spermatheca    18.1 Adult Ovary    350.1 Adult Testis    76.4 Adult Male Accessory Gland    29.2 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    256.05 Larval Midgut    26.7 Larval Hindgut    29.4 Larval Malpighian Tubules    8.4 Larval Fat Body    13.9 Larval Salivary Gland    31.7 Larval Trachea    34.95 Larval Carcass    59.95 Adult Head    62 Adult Eye    53 Adult Brain    125.8 Adult Thoracic-Abdominal Ganglion    141.8 Adult Crop    71.9 Adult Midgut    19.4 Adult Hindgut    43.4 Adult Malpighian Tubules    8.8 Adult Fat Body    25.6 Adult Salivary Gland    18.4 Adult Heart    31.45 Adult VirginFemale Spermatheca    17.9 Adult InseminatedFemale Spermatheca    18.1 Adult Ovary    350.1 Adult Testis    76.4 Adult Male Accessory Gland    29.2 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    62   NA  Eye    53   NA  Brain    125.8   256.05  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    141.8   NA  Crop    71.9   26.7  Midgut    19.4   29.4  Hindgut    43.4   8.4  Malpighian Tubules    8.8   no informative data  Fat Body    25.6   31.7  Salivary Gland    no informative data   NA  Heart    31.45   34.95  Trachea    NA   NA  VirginFemale Spermatheca    17.9   NA  InseminatedFemale Spermatheca    18.1   NA  Ovary    350.1   NA  Testis    76.4   NA  Male Accessory Gland    29.2   59.95  Carcass    62.9 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    48 central nervous system, pupae P8    40 head, virgin 1-day female    18 head, virgin 4-day female    21 head, virgin 20-day female    8 head, mated 1-day female    24 head, mated 4-day female    14 head, mated 20-day female    10 head, mated 1-day male    31 head, mated 4-day male    25 head, mated 20-day male    19 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    1 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    18 carcass, larvae L3 wandering    15 carcass, 1-day adult    11 carcass, 4-day adult    16 carcass, 20-day adult    10 ovary, virgin 4-day female    72 ovary, mated 4-day female    146 testis, mated 4-day male    4 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3  (48) central nervous system, pupae P8  (40) head, virgin 1-day female    18 head, virgin 4-day female    21 head, virgin 20-day female    8 head, mated 1-day female    24 head, mated 4-day female    14 head, mated 20-day female    10 head, mated 1-day male  (31) head, mated 4-day male    25 head, mated 20-day male    19 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    1 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    18 carcass, larvae L3 wandering    15 carcass, 1-day adult    11 carcass, 4-day adult    16 carcass, 20-day adult    10 ovary, virgin 4-day female  (72) ovary, mated 4-day female  (146) testis, mated 4-day male    4 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    48 central nervous system, pupae P8    40 head, virgin 1-day female    18 head, virgin 4-day female    21 head, virgin 20-day female    8 head, mated 1-day female    24 head, mated 4-day female    14 head, mated 20-day female    10 head, mated 1-day male    31 head, mated 4-day male    25 head, mated 20-day male    19 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    1 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    18 carcass, larvae L3 wandering    15 carcass, 1-day adult    11 carcass, 4-day adult    16 carcass, 20-day adult    10 ovary, virgin 4-day female    72 ovary, mated 4-day female  (146) testis, mated 4-day male    4 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    48 central nervous system, pupae P8    40 head, virgin 1-day female    18 head, virgin 4-day female    21 head, virgin 20-day female    8 head, mated 1-day female    24 head, mated 4-day female    14 head, mated 20-day female    10 head, mated 1-day male    31 head, mated 4-day male    25 head, mated 20-day male    19 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    1 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    18 carcass, larvae L3 wandering    15 carcass, 1-day adult    11 carcass, 4-day adult    16 carcass, 20-day adult    10 ovary, virgin 4-day female    72 ovary, mated 4-day female    146 testis, mated 4-day male    4 accessory gland, mated 4-day male    3 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    48 central nervous system, pupae P8    40 head, virgin 1-day female    18 head, virgin 4-day female    21 head, virgin 20-day female    8 head, mated 1-day female    24 head, mated 4-day female    14 head, mated 20-day female    10 head, mated 1-day male    31 head, mated 4-day male    25 head, mated 20-day male    19 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    1 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    18 carcass, larvae L3 wandering    15 carcass, 1-day adult    11 carcass, 4-day adult    16 carcass, 20-day adult    10 ovary, virgin 4-day female    72 ovary, mated 4-day female    146 testis, mated 4-day male    4 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3  (48) central nervous system, pupae P8  (40) head, virgin 1-day female    18 head, virgin 4-day female    21 head, virgin 20-day female    8 head, mated 1-day female    24 head, mated 4-day female    14 head, mated 20-day female    10 head, mated 1-day male  31 head, mated 4-day male    25 head, mated 20-day male    19 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    1 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    18 carcass, larvae L3 wandering    15 carcass, 1-day adult    11 carcass, 4-day adult    16 carcass, 20-day adult    10 ovary, virgin 4-day female  (72) ovary, mated 4-day female  (146) testis, mated 4-day male    4 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    48 central nervous system, pupae P8    40 head, virgin 1-day female    18 head, virgin 4-day female    21 head, virgin 20-day female    8 head, mated 1-day female    24 head, mated 4-day female    14 head, mated 20-day female    10 head, mated 1-day male    31 head, mated 4-day male    25 head, mated 20-day male    19 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    1 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    18 carcass, larvae L3 wandering    15 carcass, 1-day adult    11 carcass, 4-day adult    16 carcass, 20-day adult    10 ovary, virgin 4-day female    72 ovary, mated 4-day female  (146) testis, mated 4-day male    4 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    48 central nervous system, pupae P8    40 head, virgin 1-day female    18 head, virgin 4-day female    21 head, virgin 20-day female    8 head, mated 1-day female    24 head, mated 4-day female    14 head, mated 20-day female    10 head, mated 1-day male    31 head, mated 4-day male    25 head, mated 20-day male    19 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    1 digestive system, 1-day adult    1 digestive system, 4-day adult    5 digestive system, 20-day adult    3 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    18 carcass, larvae L3 wandering    15 carcass, 1-day adult    11 carcass, 4-day adult    16 carcass, 20-day adult    10 ovary, virgin 4-day female    72 ovary, mated 4-day female    146 testis, mated 4-day male    4 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    79 embryo 02-04hr    141 embryo 04-06hr    60 embryo 06-08hr    55 embryo 08-10hr    53 embryo 10-12hr    38 embryo 12-14hr    33 embryo 14-16hr    52 embryo 16-18hr    44 embryo 18-20hr    27 embryo 20-22hr    37 embryo 22-24hr    33 larva L1    17 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    7 white prepupae new    7 white prepupae 12hr    16 white prepupae 24hr    21 pupae 2d postWPP    17 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    9 adult male 05day    11 adult male 30day    12 adult female 01day    36 adult female 05day    43 adult female 30day    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (79) embryo 02-04hr  (141) embryo 04-06hr  (60) embryo 06-08hr  (55) embryo 08-10hr  (53) embryo 10-12hr  (38) embryo 12-14hr  (33) embryo 14-16hr  (52) embryo 16-18hr  (44) embryo 18-20hr  (27) embryo 20-22hr  (37) embryo 22-24hr  (33) larva L1    17 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    7 white prepupae new    7 white prepupae 12hr    16 white prepupae 24hr    21 pupae 2d postWPP    17 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    9 adult male 05day    11 adult male 30day    12 adult female 01day  (36) adult female 05day  (43) adult female 30day  (46) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    79 embryo 02-04hr  (141) embryo 04-06hr    60 embryo 06-08hr    55 embryo 08-10hr    53 embryo 10-12hr    38 embryo 12-14hr    33 embryo 14-16hr    52 embryo 16-18hr    44 embryo 18-20hr    27 embryo 20-22hr    37 embryo 22-24hr    33 larva L1    17 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    7 white prepupae new    7 white prepupae 12hr    16 white prepupae 24hr    21 pupae 2d postWPP    17 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    9 adult male 05day    11 adult male 30day    12 adult female 01day    36 adult female 05day    43 adult female 30day    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    79 embryo 02-04hr    141 embryo 04-06hr    60 embryo 06-08hr    55 embryo 08-10hr    53 embryo 10-12hr    38 embryo 12-14hr    33 embryo 14-16hr    52 embryo 16-18hr    44 embryo 18-20hr    27 embryo 20-22hr    37 embryo 22-24hr    33 larva L1    17 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    7 white prepupae new    7 white prepupae 12hr    16 white prepupae 24hr    21 pupae 2d postWPP    17 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    9 adult male 05day    11 adult male 30day    12 adult female 01day    36 adult female 05day    43 adult female 30day    46 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    79 embryo 02-04hr    141 embryo 04-06hr    60 embryo 06-08hr    55 embryo 08-10hr    53 embryo 10-12hr    38 embryo 12-14hr    33 embryo 14-16hr    52 embryo 16-18hr    44 embryo 18-20hr    27 embryo 20-22hr    37 embryo 22-24hr    33 larva L1    17 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    7 white prepupae new    7 white prepupae 12hr    16 white prepupae 24hr    21 pupae 2d postWPP    17 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    9 adult male 05day    11 adult male 30day    12 adult female 01day    36 adult female 05day    43 adult female 30day    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (79) embryo 02-04hr  (141) embryo 04-06hr  (60) embryo 06-08hr  (55) embryo 08-10hr  (53) embryo 10-12hr  (38) embryo 12-14hr  (33) embryo 14-16hr  (52) embryo 16-18hr  (44) embryo 18-20hr  27 embryo 20-22hr  (37) embryo 22-24hr  (33) larva L1    17 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    7 white prepupae new    7 white prepupae 12hr    16 white prepupae 24hr    21 pupae 2d postWPP    17 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    9 adult male 05day    11 adult male 30day    12 adult female 01day  (36) adult female 05day  (43) adult female 30day  (46) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    79 embryo 02-04hr  141 embryo 04-06hr    60 embryo 06-08hr    55 embryo 08-10hr    53 embryo 10-12hr    38 embryo 12-14hr    33 embryo 14-16hr    52 embryo 16-18hr    44 embryo 18-20hr    27 embryo 20-22hr    37 embryo 22-24hr    33 larva L1    17 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    7 white prepupae new    7 white prepupae 12hr    16 white prepupae 24hr    21 pupae 2d postWPP    17 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    9 adult male 05day    11 adult male 30day    12 adult female 01day    36 adult female 05day    43 adult female 30day    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    79 embryo 02-04hr    141 embryo 04-06hr    60 embryo 06-08hr    55 embryo 08-10hr    53 embryo 10-12hr    38 embryo 12-14hr    33 embryo 14-16hr    52 embryo 16-18hr    44 embryo 18-20hr    27 embryo 20-22hr    37 embryo 22-24hr    33 larva L1    17 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    7 white prepupae new    7 white prepupae 12hr    16 white prepupae 24hr    21 pupae 2d postWPP    17 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    9 adult male 05day    11 adult male 30day    12 adult female 01day    36 adult female 05day    43 adult female 30day    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    7 Schneider line 2 Sg4    4 embryonic 1182-4H    16 embryonic GM2    3 embryonic Kc167    8 embryonic S1    6 embryonic S3    4 leg disc CME L1    5 wing disc CME-W2    4 wing disc ML-DmD8    13 wing disc ML-DmD9    11 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    5 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    10 eye-antennal disc ML-DmD11    11 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    11 CNS ML-DmBG2-c2    5 tumorous blood cells mbn2    1 ovary fGS/OSS    9 ovary OSC    10 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    7 Schneider line 2 Sg4    4 embryonic 1182-4H    16 embryonic GM2    3 embryonic Kc167    8 embryonic S1    6 embryonic S3    4 leg disc CME L1    5 wing disc CME-W2    4 wing disc ML-DmD8    13 wing disc ML-DmD9    11 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    5 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    10 eye-antennal disc ML-DmD11    11 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    11 CNS ML-DmBG2-c2    5 tumorous blood cells mbn2    1 ovary fGS/OSS    9 ovary OSC    10 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    7 Schneider line 2 Sg4    4 embryonic 1182-4H    16 embryonic GM2    3 embryonic Kc167    8 embryonic S1    6 embryonic S3    4 leg disc CME L1    5 wing disc CME-W2    4 wing disc ML-DmD8    13 wing disc ML-DmD9    11 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    5 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    10 eye-antennal disc ML-DmD11    11 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    11 CNS ML-DmBG2-c2    5 tumorous blood cells mbn2    1 ovary fGS/OSS    9 ovary OSC    10 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    7 Schneider line 2 Sg4    4 embryonic 1182-4H    16 embryonic GM2    3 embryonic Kc167    8 embryonic S1    6 embryonic S3    4 leg disc CME L1    5 wing disc CME-W2    4 wing disc ML-DmD8    13 wing disc ML-DmD9    11 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    5 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    10 eye-antennal disc ML-DmD11    11 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    11 CNS ML-DmBG2-c2    5 tumorous blood cells mbn2    1 ovary fGS/OSS    9 ovary OSC    10 ovary OSS    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    7 Schneider line 2 Sg4    4 embryonic 1182-4H    16 embryonic GM2    3 embryonic Kc167    8 embryonic S1    6 embryonic S3    4 leg disc CME L1    5 wing disc CME-W2    4 wing disc ML-DmD8    13 wing disc ML-DmD9    11 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    5 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    10 eye-antennal disc ML-DmD11    11 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    11 CNS ML-DmBG2-c2    5 tumorous blood cells mbn2    1 ovary fGS/OSS    9 ovary OSC    10 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    7 Schneider line 2 Sg4    4 embryonic 1182-4H    16 embryonic GM2    3 embryonic Kc167    8 embryonic S1    6 embryonic S3    4 leg disc CME L1    5 wing disc CME-W2    4 wing disc ML-DmD8    13 wing disc ML-DmD9    11 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    5 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    10 eye-antennal disc ML-DmD11    11 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    11 CNS ML-DmBG2-c2    5 tumorous blood cells mbn2    1 ovary fGS/OSS    9 ovary OSC    10 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    7 Schneider line 2 Sg4    4 embryonic 1182-4H    16 embryonic GM2    3 embryonic Kc167    8 embryonic S1    6 embryonic S3    4 leg disc CME L1    5 wing disc CME-W2    4 wing disc ML-DmD8    13 wing disc ML-DmD9    11 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    5 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    10 eye-antennal disc ML-DmD11    11 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    11 CNS ML-DmBG2-c2    5 tumorous blood cells mbn2    1 ovary fGS/OSS    9 ovary OSC    10 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    7 Schneider line 2 Sg4    4 embryonic 1182-4H    16 embryonic GM2    3 embryonic Kc167    8 embryonic S1    6 embryonic S3    4 leg disc CME L1    5 wing disc CME-W2    4 wing disc ML-DmD8    13 wing disc ML-DmD9    11 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    5 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    10 eye-antennal disc ML-DmD11    11 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    9 CNS ML-DmBG1-c1    11 CNS ML-DmBG2-c2    5 tumorous blood cells mbn2    1 ovary fGS/OSS    9 ovary OSC    10 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    75 cold shock, 4-day adult    47 heat shock, 4-day adult    24 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    3 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    98 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    55 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    34 Ethanol 2.5% 3 hrs, larvae L3    52 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    104 Caffeine 25 mg/ml 48 hrs, 4-day adult    81 Paraquat 5 mM 48 hrs, 4-day adult    67 Paraquat 10 mM 48 hrs, 4-day adult    35 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (75) cold shock, 4-day adult  (47) heat shock, 4-day adult    24 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    3 Cadmium 50 mM 48 hrs, 4-day adult  (40) Cadmium 100 mM 48 hrs, 4-day adult  (98) Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult  (55) Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult  (34) Ethanol 2.5% 3 hrs, larvae L3  (52) Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (104) Caffeine 25 mg/ml 48 hrs, 4-day adult  (81) Paraquat 5 mM 48 hrs, 4-day adult  (67) Paraquat 10 mM 48 hrs, 4-day adult  (35) Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    75 cold shock, 4-day adult    47 heat shock, 4-day adult    24 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    3 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    98 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    55 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    34 Ethanol 2.5% 3 hrs, larvae L3    52 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  104 Caffeine 25 mg/ml 48 hrs, 4-day adult    81 Paraquat 5 mM 48 hrs, 4-day adult    67 Paraquat 10 mM 48 hrs, 4-day adult    35 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    75 cold shock, 4-day adult    47 heat shock, 4-day adult    24 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    3 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    98 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    55 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    34 Ethanol 2.5% 3 hrs, larvae L3    52 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    104 Caffeine 25 mg/ml 48 hrs, 4-day adult    81 Paraquat 5 mM 48 hrs, 4-day adult    67 Paraquat 10 mM 48 hrs, 4-day adult    35 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    75 cold shock, 4-day adult    47 heat shock, 4-day adult    24 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    3 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    98 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    55 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    34 Ethanol 2.5% 3 hrs, larvae L3    52 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    104 Caffeine 25 mg/ml 48 hrs, 4-day adult    81 Paraquat 5 mM 48 hrs, 4-day adult    67 Paraquat 10 mM 48 hrs, 4-day adult    35 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (75) cold shock, 4-day adult  (47) heat shock, 4-day adult    24 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    3 Cadmium 50 mM 48 hrs, 4-day adult  (40) Cadmium 100 mM 48 hrs, 4-day adult  (98) Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult  (55) Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult  (34) Ethanol 2.5% 3 hrs, larvae L3  (52) Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (104) Caffeine 25 mg/ml 48 hrs, 4-day adult  (81) Paraquat 5 mM 48 hrs, 4-day adult  (67) Paraquat 10 mM 48 hrs, 4-day adult  (35) Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    75 cold shock, 4-day adult    47 heat shock, 4-day adult    24 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    3 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    98 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    55 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    34 Ethanol 2.5% 3 hrs, larvae L3    52 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  104 Caffeine 25 mg/ml 48 hrs, 4-day adult    81 Paraquat 5 mM 48 hrs, 4-day adult    67 Paraquat 10 mM 48 hrs, 4-day adult    35 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    75 cold shock, 4-day adult    47 heat shock, 4-day adult    24 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    3 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    98 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    55 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    34 Ethanol 2.5% 3 hrs, larvae L3    52 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    104 Caffeine 25 mg/ml 48 hrs, 4-day adult    81 Paraquat 5 mM 48 hrs, 4-day adult    67 Paraquat 10 mM 48 hrs, 4-day adult    35 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_01 mE1_20_mRNA_expression_cluster_03
External Data & Images
Linkouts	BDGP expression data • LD13887 LD44182 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0052043 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG32043-RB FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG32043 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG32043CB03247 CG32043EY15907 viable, with Scer\GAL4pnr-MD237 CG32043GD10438 Sterility Allele fertile CG32043EY15907 Phenotype manifest in Allele
Classical Alleles ( 14 )
For All Classical Alleles Show
Allele of CG32043 Class Mutagen Stocks Known lesion CG320435-SZ-3135 1 -- CG32043c02526 piggyBac transposase 1 -- CG32043CB-0931-3 1 -- CG32043CB-6445-3 1 -- CG32043d03804 P-element activity 1 -- CG32043e01323 piggyBac transposase 1 -- CG32043e03128 piggyBac transposase 1 -- CG32043EY15907 P-element activity 1 -- CG32043KG03120 P-element activity 1 -- CG32043NP0651 1 -- CG32043CB03247 P-element activity 0 Yes CG32043d11512 0 -- CG32043DG30504 P-element activity 0 -- CG32043EP3665 P-element activity 0 --
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG32043 Class Mutagen Stocks Known lesion CG32043GD10438 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG32043GD6054 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG32043NIG.18632R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes CG32043NIG.3628R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD6054} NA P{GD10438} NA P{NIG.3628R} NA P{NIG.18632R} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG32043EP3665 NA P{EPgy2}CG32043EY15907 NA P{XP}CG32043d03804 NA P{XP}CG32043d11512 NA miscellaneous insertions P{PTT-GB}CG32043CB03247 NA P{RS3}CG32043CB-0931-3 NA P{RS3}CG32043CB-6445-3 NA P{RS5}CG320435-SZ-3135 NA P{SUPor-P}CG32043KG03120 NA P{wHy}CG32043DG30504 NA PBac{PB}CG32043c02526 NA PBac{RB}CG32043e01323 NA PBac{RB}CG32043e03128 NA insertion of enhancer trap binary system P{GawB}CG32043NP0651 No
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG32043 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 64492 DroID - A comprehensive database of gene and protein interactions. • FBgn0052043 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 39099
Orthologs
OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search No orthologs identified Dipteran inclusive ortholog search No orthologs identified Insect inclusive ortholog search No orthologs identified Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (None identified)
No orthologies identified
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD14186 Drosophila sechellia Dsec\GM25152 Drosophila erecta Dere\GG15381 Drosophila yakuba Dyak\GE20844 Drosophila ananassae Dana\GF25137 Drosophila pseudoobscura pseudoobscura Dpse\GA16633 Drosophila persimilis Dper\GL17881 Drosophila willistoni Dwil\GK20557 Drosophila virilis Dvir\GJ12174 Drosophila mojavensis Dmoj\GI11949 Drosophila grimshawi Dgri\GH15239
Stocks & Reagents
Stocks Listed in FlyBase ( 13 )
Bloomington	21171 y1 w67c23; P{EPgy2}CG32043EY15907
Harvard	- P{XP}CG32043d03804 - PBac{PB}CG32043c02526 - PBac{RB}CG32043e01323 - PBac{RB}CG32043e03128
Kyoto	123386 w1118; P{RS3}CG32043CB-0931-3 124106 w1118; P{RS3}CG32043CB-6445-3 125912 w1118; P{RS5}CG320435-SZ-3135 103696 w*; P{GawB}CG32043NP0651 / TM3, Ser1
VDRC	v49421 w1118; P{GD6054}v49421 v25948 w1118; P{GD10438}v25948 v25950 w1118; P{GD10438}v25950
	More stocks available...
Genomic Clones ( 1 )
	BACR01E20 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 100 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD13887 LD44182 LD45273
Other clones	MIP29235
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GM02516 LD02411 LD20527 LD24777 LD24779 LD41554 LP04612 RE08268 RE10166 RE31133 RE58509
Other clones	10864 13723 14504 37400 45205 47708 54586 56843 64254 70166 72951 74400 100050 103802 125377 125426 146876 150040 176855 214251.72 214345.69 bs09f03 CK01.62B.E1 CK01.83C.H10 CK01.101A.E8 CK01.119A.C10 CK01.145C.G3 Dmel_neb_001292_0142_2216 Dmel_neb_001659_0112_0350 Dmel_neb_001687_0180_3754 Dmel_neb_005950_0152_1672 Dmel_neb_006000_0079_1325 Dmel_neb_006259_0387_2476 Dmel_neb_006667_0076_2501 Dmel_neb_007872_0353_1948 Dmel_neb_007878_0172_2934 Dmel_neb_008446_0333_0532 Dmel_neb_009417_0070_2647 Dmel_neb_009444_0194_1442 Dmel_neb_009899_0084_2243 Dmel_neb_009905_0186_2549 Dmel_neb_011809_0128_3191 Dmel_neb_013547_0386_1955 EK050013 EK059261 EK064226 EK066563 EK069107 EK070630 EK073904 EK090941 EK110906 EK112243 EK112247 EK112259 EK115332 EK116536 EK119626 EK146407 EK149236 EK160828 EK162905 EK166452 EK170639 EK175723 EK179849 EK189841 EK194308 EK197337 EK247825 EK249642 EK256163 EK281743 EP02838 LD02119 LD11674 RP004230782 RP004313215 RP004363725 RP004381650 RP004402724 RP004439968 RP004468779 RP004470303 RP004475161
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0052043 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 39099
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG18632 CG3628 (FlyBase Genome Annotators, 2002-2003) Source for merge of: CG32043 anon-WO0118547.368 anon-WO0118547.427 (FlyBase, 1996-)
Additional comments	Annotations CG18632 and CG3628 merged as CG32043 in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003) Source for merge of CG32043 anon-WO0118547.368 anon-WO0118547.427 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
	RNAi generated by PCR using primers directed to this gene causes a cell growth and viability phenotype when assayed in Kc167 and S2R+ cells. (Boutros et al., 2004) Area matching Drosophila EST AA391736. This EST forms a 1692bp contig with ESTs AA202259 and AA820861. (Davies, 2001.3.15) Area matching Drosophila EST AA202259 (inverted). This EST forms a 1693bp EST contig with AA391736 and AA820861. (Davies, 2001.3.15)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_140064 NM_168346 NM_001144455 NM_001144456 RefSeq (Proteins) • NP_648321 NP_729500 NP_001137927 NP_001137928 DDBJ / EMBL / GenBank • AA202259 AA391736 AA439343 AAF50260 AAF50261 AAL25472 AAL39574 AAM48369 ACL83282 ACL83283 AI512340 AI513054 AI945157 AQ073101 AW942290 AW943702 AW943774 AX094244 AX094303 AY060433 AY069429 AY118340 BH256458 BH256459 CZ468007 CZ473571 CZ479135 CZ479136 CZ480895 Entrez Gene - A searchable database of RefSeq genes. • 39099 UniProtKB/TrEMBL • B7Z0F8 Q0E8G5 Q8MT74 Q8T0B3 Q95SY1
Other Crossreferences
	BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LD13887 LD44182
Linkouts
	BioGRID - A database of protein and genetic interactions • 64492 DroID - A comprehensive database of gene and protein interactions. • FBgn0052043 DRSC - Results from RNAi screens. • FBgn0052043 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0052043 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG32043-RB FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0052043 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 39099 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 39099 modMine - Data generated by the modENCODE project. • FBgn0052043
Synonyms & Secondary IDs ( 5 )
Reported As
Symbol Synonym	anon-WO0118547.368   anon-WO0118547.427   CG3628   CG18632 (Boutros et al., 2004, ) CG32043 (Buszczak et al., 2007, Japanese National Institute of Genetics, 2012.5.21)
Name Synonym
Secondary FlyBase IDs
	FBgn0036001 FBgn0036002 FBgn0062015 FBgn0062063
References ( 22 )
Generate a list of	All references relating to this gene ( 22 )
List References by type	Research paper  ( 1 ) Supplementary material  ( 5 ) Personal communication to FlyBase  ( 7 ) FlyBase analysis  ( 4 ) Stock list  ( 1 ) Patent  ( 1 ) DNA/RNA sequence record  ( 2 ) Website  ( 1 )
Recent research papers (0)
	All research papers listed in FlyBase were published before 2011 Show research papers ...