Gene Dmel\CG32226

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General Information

Symbol

Dmel\CG32226

Species

D. melanogaster

Name

Annotation symbol

CG32226

Feature type

protein_coding_gene

FlyBase ID

FBgn0052226

Gene Model Status

Current

Stock availability

3 publicly available

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

77B1-77B2

Sequence location

3L:20,290,229..20,295,202 [-]

Genomic Maps

Select View:

modENCODE GBrowse

Summary Information

Automatically generated summary

See sections below for more information

This gene is referred to in FlyBase by the symbol Dmel\CG32226 (FBgn0052226). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: sugar binding. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Beta-propeller repeat TECPR; Concanavalin A-like lectin/glucanase; Concanavalin A-like lectin/glucanase, subgroup; Ferlin/Peroxisome membrane; Galectin, carbohydrate recognition domain; Integral peroxisomal membrane peroxin. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-18 hour embryonic stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, larval/adult midgut, adult Malpighian tubules, larval/adult salivary gland, adult female reproductive system. Comments on Affy2 ProbeSet: ProbeSet 1630658_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG32226. Gene sequence location is 3L:20290229..20295202.

Recent Updates

Description

What does this section display?

This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).

What does this section not display?

This section does not currently display links that were removed or gene model changes.

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FB2012_01

References

Mast et al., 2011, Dis. Model Mech. 4(5): 659--672

Sequence features

HFA10323

HFA10645

BKN21038

FB2011_10

All updates

Click here to see a list of all updates to this record from FB2010_08 and on.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

77B1-77B2

Limits computationally determined from genome sequence between P{lacW}l(3)L1243^L1243&P{lacW}Mi-2^j3D4 and P{PZ}eRF1⁰⁰¹⁰³

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

Left of (cM)

Right of (cM)

Notes

Gene Model & Products

Please see the GBrowse view of Dmel\CG32226 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Comments on Gene Model

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

CG32226-RA

FBtr0074846

NM_168841

4465

1350

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

CG32226-PA

FBpp0074615

149.5

1350

6.99

NP_730508

AAF49038

Additional Polypeptide Data & Comments

Reported size (kDa)

Comments

External Data

Linkouts

Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

Galectin, carbohydrate recognition domain (IPR001079)

Ferlin/Peroxisome membrane (IPR006614)

Beta-propeller repeat TECPR (IPR006624)

Concanavalin A-like lectin/glucanase (IPR008985)

Concanavalin A-like lectin/glucanase, subgroup (IPR013320)

Integral peroxisomal membrane peroxin (IPR010482)

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

Q9VWB0

Mapped Features

Mapped Features have been reorganized, please see this article for details.

Additional mapped features and mutations can be found on GBrowse or related reports.

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

Crossreferences

Expression Data

Transcript Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Notes

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Notes

High-Throughput Expression Data

Untitled Document detailed view

See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0052226

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	max expr for FBgn0052226
	Very low expression bin max
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-18 hour embryonic stages, in adult female stages.
[download data (TSV)]

Guide to modENCODE expression level colors
	No expression (0 - 0)
	Extremely low expression (1 - 10)
	Very low expression (11 - 100)
	Low expression (101 - 400)
	Moderate expression (401 - 1400)
	Moderately high expression (1401 - 4000)
	High expression (4001 - 10000)
	Very high expression (10001 - 100000)
	Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0052226 expression level
Developmental Stage		Expression Level
embryo 00-02hr		3245
embryo 02-04hr		1220
embryo 04-06hr		1278
embryo 06-08hr		1466
embryo 08-10hr		1436
embryo 10-12hr		1249
embryo 12-14hr		1179
embryo 14-16hr		1592
embryo 16-18hr		1266
embryo 18-20hr		1002
embryo 20-22hr		1394
embryo 22-24hr		1052
larva L1		768
larva L2		445
larva L3 12hr old		290
larva L3 puffstage 1-2		309
larva L3 puffstage 3-6		564
larva L3 puffstage 7-9		616
white prepupae new		636
white prepupae 12hr		843
white prepupae 24hr		1006
pupae 2d postWPP		751
pupae 3d postWPP		462
pupae 4d postWPP		442
adult male 01day		564
adult male 05day		706
adult male 30day		787
adult female 01day		985
adult female 05day		1520
adult female 30day		1708
Expression Level Scale		None Extremely low Very low Low Moderate Moderately high

Linear, scaled to Very low expression
Developmental Stage		Expression Level
embryo 00-02hr		(3245)
embryo 02-04hr		(1220)
embryo 04-06hr		(1278)
embryo 06-08hr		(1466)
embryo 08-10hr		(1436)
embryo 10-12hr		(1249)
embryo 12-14hr		(1179)
embryo 14-16hr		(1592)
embryo 16-18hr		(1266)
embryo 18-20hr		(1002)
embryo 20-22hr		(1394)
embryo 22-24hr		(1052)
larva L1		(768)
larva L2		(445)
larva L3 12hr old		(290)
larva L3 puffstage 1-2		(309)
larva L3 puffstage 3-6		(564)
larva L3 puffstage 7-9		(616)
white prepupae new		(636)
white prepupae 12hr		(843)
white prepupae 24hr		(1006)
pupae 2d postWPP		(751)
pupae 3d postWPP		(462)
pupae 4d postWPP		(442)
adult male 01day		(564)
adult male 05day		(706)
adult male 30day		(787)
adult female 01day		(985)
adult female 05day		(1520)
adult female 30day		(1708)
Expression Level Scale		None Extremely low Very low Low

Linear, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		(3245)
embryo 02-04hr		1220
embryo 04-06hr		1278
embryo 06-08hr		1466
embryo 08-10hr		1436
embryo 10-12hr		1249
embryo 12-14hr		1179
embryo 14-16hr		(1592)
embryo 16-18hr		1266
embryo 18-20hr		1002
embryo 20-22hr		1394
embryo 22-24hr		1052
larva L1		768
larva L2		445
larva L3 12hr old		290
larva L3 puffstage 1-2		309
larva L3 puffstage 3-6		564
larva L3 puffstage 7-9		616
white prepupae new		636
white prepupae 12hr		843
white prepupae 24hr		1006
pupae 2d postWPP		751
pupae 3d postWPP		462
pupae 4d postWPP		442
adult male 01day		564
adult male 05day		706
adult male 30day		787
adult female 01day		985
adult female 05day		(1520)
adult female 30day		(1708)
Expression Level Scale		None Extremely low Very low Low Moderate Moderately high

Linear, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		3245
embryo 02-04hr		1220
embryo 04-06hr		1278
embryo 06-08hr		1466
embryo 08-10hr		1436
embryo 10-12hr		1249
embryo 12-14hr		1179
embryo 14-16hr		1592
embryo 16-18hr		1266
embryo 18-20hr		1002
embryo 20-22hr		1394
embryo 22-24hr		1052
larva L1		768
larva L2		445
larva L3 12hr old		290
larva L3 puffstage 1-2		309
larva L3 puffstage 3-6		564
larva L3 puffstage 7-9		616
white prepupae new		636
white prepupae 12hr		843
white prepupae 24hr		1006
pupae 2d postWPP		751
pupae 3d postWPP		462
pupae 4d postWPP		442
adult male 01day		564
adult male 05day		706
adult male 30day		787
adult female 01day		985
adult female 05day		1520
adult female 30day		1708
Expression Level Scale		None Extremely low Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		3245
embryo 02-04hr		1220
embryo 04-06hr		1278
embryo 06-08hr		1466
embryo 08-10hr		1436
embryo 10-12hr		1249
embryo 12-14hr		1179
embryo 14-16hr		1592
embryo 16-18hr		1266
embryo 18-20hr		1002
embryo 20-22hr		1394
embryo 22-24hr		1052
larva L1		768
larva L2		445
larva L3 12hr old		290
larva L3 puffstage 1-2		309
larva L3 puffstage 3-6		564
larva L3 puffstage 7-9		616
white prepupae new		636
white prepupae 12hr		843
white prepupae 24hr		1006
pupae 2d postWPP		751
pupae 3d postWPP		462
pupae 4d postWPP		442
adult male 01day		564
adult male 05day		706
adult male 30day		787
adult female 01day		985
adult female 05day		1520
adult female 30day		1708
Expression Level Scale		None Extremely low Very low Low Moderate Moderately high High Very high Extremely high

log, scaled to maximum FBgn0052226 expression level
Developmental Stage		Expression Level
embryo 00-02hr		3245
embryo 02-04hr		1220
embryo 04-06hr		1278
embryo 06-08hr		1466
embryo 08-10hr		1436
embryo 10-12hr		1249
embryo 12-14hr		1179
embryo 14-16hr		1592
embryo 16-18hr		1266
embryo 18-20hr		1002
embryo 20-22hr		1394
embryo 22-24hr		1052
larva L1		768
larva L2		445
larva L3 12hr old		290
larva L3 puffstage 1-2		309
larva L3 puffstage 3-6		564
larva L3 puffstage 7-9		616
white prepupae new		636
white prepupae 12hr		843
white prepupae 24hr		1006
pupae 2d postWPP		751
pupae 3d postWPP		462
pupae 4d postWPP		442
adult male 01day		564
adult male 05day		706
adult male 30day		787
adult female 01day		985
adult female 05day		1520
adult female 30day		1708
Expression Level Scale		None Extremely low Very low Low Moderate Moderately high High

log, scaled to Very low expression
Developmental Stage		Expression Level
embryo 00-02hr		(3245)
embryo 02-04hr		(1220)
embryo 04-06hr		(1278)
embryo 06-08hr		(1466)
embryo 08-10hr		(1436)
embryo 10-12hr		(1249)
embryo 12-14hr		(1179)
embryo 14-16hr		(1592)
embryo 16-18hr		(1266)
embryo 18-20hr		(1002)
embryo 20-22hr		(1394)
embryo 22-24hr		(1052)
larva L1		(768)
larva L2		(445)
larva L3 12hr old		(290)
larva L3 puffstage 1-2		(309)
larva L3 puffstage 3-6		(564)
larva L3 puffstage 7-9		(616)
white prepupae new		(636)
white prepupae 12hr		(843)
white prepupae 24hr		(1006)
pupae 2d postWPP		(751)
pupae 3d postWPP		(462)
pupae 4d postWPP		(442)
adult male 01day		(564)
adult male 05day		(706)
adult male 30day		(787)
adult female 01day		(985)
adult female 05day		(1520)
adult female 30day		(1708)
Expression Level Scale		None Extremely low Very low Low

log, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		(3245)
embryo 02-04hr		1220
embryo 04-06hr		1278
embryo 06-08hr		1466
embryo 08-10hr		1436
embryo 10-12hr		1249
embryo 12-14hr		1179
embryo 14-16hr		1592
embryo 16-18hr		1266
embryo 18-20hr		1002
embryo 20-22hr		1394
embryo 22-24hr		1052
larva L1		768
larva L2		445
larva L3 12hr old		290
larva L3 puffstage 1-2		309
larva L3 puffstage 3-6		564
larva L3 puffstage 7-9		616
white prepupae new		636
white prepupae 12hr		843
white prepupae 24hr		1006
pupae 2d postWPP		751
pupae 3d postWPP		462
pupae 4d postWPP		442
adult male 01day		564
adult male 05day		706
adult male 30day		787
adult female 01day		985
adult female 05day		1520
adult female 30day		1708
Expression Level Scale		None Extremely low Very low Low Moderate Moderately high

log, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		3245
embryo 02-04hr		1220
embryo 04-06hr		1278
embryo 06-08hr		1466
embryo 08-10hr		1436
embryo 10-12hr		1249
embryo 12-14hr		1179
embryo 14-16hr		1592
embryo 16-18hr		1266
embryo 18-20hr		1002
embryo 20-22hr		1394
embryo 22-24hr		1052
larva L1		768
larva L2		445
larva L3 12hr old		290
larva L3 puffstage 1-2		309
larva L3 puffstage 3-6		564
larva L3 puffstage 7-9		616
white prepupae new		636
white prepupae 12hr		843
white prepupae 24hr		1006
pupae 2d postWPP		751
pupae 3d postWPP		462
pupae 4d postWPP		442
adult male 01day		564
adult male 05day		706
adult male 30day		787
adult female 01day		985
adult female 05day		1520
adult female 30day		1708
Expression Level Scale		None Extremely low Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		3245
embryo 02-04hr		1220
embryo 04-06hr		1278
embryo 06-08hr		1466
embryo 08-10hr		1436
embryo 10-12hr		1249
embryo 12-14hr		1179
embryo 14-16hr		1592
embryo 16-18hr		1266
embryo 18-20hr		1002
embryo 20-22hr		1394
embryo 22-24hr		1052
larva L1		768
larva L2		445
larva L3 12hr old		290
larva L3 puffstage 1-2		309
larva L3 puffstage 3-6		564
larva L3 puffstage 7-9		616
white prepupae new		636
white prepupae 12hr		843
white prepupae 24hr		1006
pupae 2d postWPP		751
pupae 3d postWPP		462
pupae 4d postWPP		442
adult male 01day		564
adult male 05day		706
adult male 30day		787
adult female 01day		985
adult female 05day		1520
adult female 30day		1708
Expression Level Scale		None Extremely low Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Developmental Stage		Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day

FlyAtlas Anatomical Expression Data for FBgn0052226

	Styles
	Linear
	Logarithmic
	Heatmap
	Back-to-back
	Scales
	max expr for FBgn0052226
	Moderate expression bin max
	High level expression bin max
	Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, larval/adult midgut, adult Malpighian tubules, larval/adult salivary gland, adult female reproductive system.
[download data (TSV)]

Guide to FlyAtlas expression level colors
	No expression (0 - 9.999)
	Low expression (10 - 99.999)
	Moderate expression (100 - 499.999)
	High level expression (500 - 999.999)
	Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0052226 expression level
Tissue		Expression Level
Larval Central Nervous System		255.25
Larval Midgut		136.1
Larval Hindgut		89.5
Larval Malpighian Tubules		85.6
Larval Fat Body		78.9
Larval Salivary Gland		136
Larval Trachea		71.95
Larval Carcass		70.95
Adult Head		131.3
Adult Eye		170.4
Adult Brain		351.4
Adult Thoracic-Abdominal Ganglion		417.8
Adult Crop		90.2
Adult Midgut		127.1
Adult Hindgut		75
Adult Malpighian Tubules		108.3
Adult Fat Body		61
Adult Salivary Gland		121.6
Adult Heart		58.825
Adult VirginFemale Spermatheca		111.3
Adult InseminatedFemale Spermatheca		113.6
Adult Ovary		215.7
Adult Testis		88.3
Adult Male Accessory Gland		99.4
Adult Carcass		60.8
Expression Level Scale		None Low Moderate

Linear, scaled to Moderate expression
Tissue		Expression Level
Larval Central Nervous System		255.25
Larval Midgut		136.1
Larval Hindgut		89.5
Larval Malpighian Tubules		85.6
Larval Fat Body		78.9
Larval Salivary Gland		136
Larval Trachea		71.95
Larval Carcass		70.95
Adult Head		131.3
Adult Eye		170.4
Adult Brain		351.4
Adult Thoracic-Abdominal Ganglion		417.8
Adult Crop		90.2
Adult Midgut		127.1
Adult Hindgut		75
Adult Malpighian Tubules		108.3
Adult Fat Body		61
Adult Salivary Gland		121.6
Adult Heart		58.825
Adult VirginFemale Spermatheca		111.3
Adult InseminatedFemale Spermatheca		113.6
Adult Ovary		215.7
Adult Testis		88.3
Adult Male Accessory Gland		99.4
Adult Carcass		60.8
Expression Level Scale		None Low Moderate High

Linear, scaled to High level expression
Tissue		Expression Level
Larval Central Nervous System		255.25
Larval Midgut		136.1
Larval Hindgut		89.5
Larval Malpighian Tubules		85.6
Larval Fat Body		78.9
Larval Salivary Gland		136
Larval Trachea		71.95
Larval Carcass		70.95
Adult Head		131.3
Adult Eye		170.4
Adult Brain		351.4
Adult Thoracic-Abdominal Ganglion		417.8
Adult Crop		90.2
Adult Midgut		127.1
Adult Hindgut		75
Adult Malpighian Tubules		108.3
Adult Fat Body		61
Adult Salivary Gland		121.6
Adult Heart		58.825
Adult VirginFemale Spermatheca		111.3
Adult InseminatedFemale Spermatheca		113.6
Adult Ovary		215.7
Adult Testis		88.3
Adult Male Accessory Gland		99.4
Adult Carcass		60.8
Expression Level Scale		None Low Moderate High Very high

Linear, scaled to Very high expression
Tissue		Expression Level
Larval Central Nervous System		255.25
Larval Midgut		136.1
Larval Hindgut		89.5
Larval Malpighian Tubules		85.6
Larval Fat Body		78.9
Larval Salivary Gland		136
Larval Trachea		71.95
Larval Carcass		70.95
Adult Head		131.3
Adult Eye		170.4
Adult Brain		351.4
Adult Thoracic-Abdominal Ganglion		417.8
Adult Crop		90.2
Adult Midgut		127.1
Adult Hindgut		75
Adult Malpighian Tubules		108.3
Adult Fat Body		61
Adult Salivary Gland		121.6
Adult Heart		58.825
Adult VirginFemale Spermatheca		111.3
Adult InseminatedFemale Spermatheca		113.6
Adult Ovary		215.7
Adult Testis		88.3
Adult Male Accessory Gland		99.4
Adult Carcass		60.8
Expression Level Scale		None Low Moderate High Very high

log, scaled to maximum FBgn0052226 expression level
Tissue		Expression Level
Larval Central Nervous System		255.25
Larval Midgut		136.1
Larval Hindgut		89.5
Larval Malpighian Tubules		85.6
Larval Fat Body		78.9
Larval Salivary Gland		136
Larval Trachea		71.95
Larval Carcass		70.95
Adult Head		131.3
Adult Eye		170.4
Adult Brain		351.4
Adult Thoracic-Abdominal Ganglion		417.8
Adult Crop		90.2
Adult Midgut		127.1
Adult Hindgut		75
Adult Malpighian Tubules		108.3
Adult Fat Body		61
Adult Salivary Gland		121.6
Adult Heart		58.825
Adult VirginFemale Spermatheca		111.3
Adult InseminatedFemale Spermatheca		113.6
Adult Ovary		215.7
Adult Testis		88.3
Adult Male Accessory Gland		99.4
Adult Carcass		60.8
Expression Level Scale		None Low Moderate High

log, scaled to Moderate expression
Tissue		Expression Level
Larval Central Nervous System		255.25
Larval Midgut		136.1
Larval Hindgut		89.5
Larval Malpighian Tubules		85.6
Larval Fat Body		78.9
Larval Salivary Gland		136
Larval Trachea		71.95
Larval Carcass		70.95
Adult Head		131.3
Adult Eye		170.4
Adult Brain		351.4
Adult Thoracic-Abdominal Ganglion		417.8
Adult Crop		90.2
Adult Midgut		127.1
Adult Hindgut		75
Adult Malpighian Tubules		108.3
Adult Fat Body		61
Adult Salivary Gland		121.6
Adult Heart		58.825
Adult VirginFemale Spermatheca		111.3
Adult InseminatedFemale Spermatheca		113.6
Adult Ovary		215.7
Adult Testis		88.3
Adult Male Accessory Gland		99.4
Adult Carcass		60.8
Expression Level Scale		None Low Moderate High

log, scaled to High level expression
Tissue		Expression Level
Larval Central Nervous System		255.25
Larval Midgut		136.1
Larval Hindgut		89.5
Larval Malpighian Tubules		85.6
Larval Fat Body		78.9
Larval Salivary Gland		136
Larval Trachea		71.95
Larval Carcass		70.95
Adult Head		131.3
Adult Eye		170.4
Adult Brain		351.4
Adult Thoracic-Abdominal Ganglion		417.8
Adult Crop		90.2
Adult Midgut		127.1
Adult Hindgut		75
Adult Malpighian Tubules		108.3
Adult Fat Body		61
Adult Salivary Gland		121.6
Adult Heart		58.825
Adult VirginFemale Spermatheca		111.3
Adult InseminatedFemale Spermatheca		113.6
Adult Ovary		215.7
Adult Testis		88.3
Adult Male Accessory Gland		99.4
Adult Carcass		60.8
Expression Level Scale		None Low Moderate High Very high

log, scaled to Very high expression
Tissue		Expression Level
Larval Central Nervous System		255.25
Larval Midgut		136.1
Larval Hindgut		89.5
Larval Malpighian Tubules		85.6
Larval Fat Body		78.9
Larval Salivary Gland		136
Larval Trachea		71.95
Larval Carcass		70.95
Adult Head		131.3
Adult Eye		170.4
Adult Brain		351.4
Adult Thoracic-Abdominal Ganglion		417.8
Adult Crop		90.2
Adult Midgut		127.1
Adult Hindgut		75
Adult Malpighian Tubules		108.3
Adult Fat Body		61
Adult Salivary Gland		121.6
Adult Heart		58.825
Adult VirginFemale Spermatheca		111.3
Adult InseminatedFemale Spermatheca		113.6
Adult Ovary		215.7
Adult Testis		88.3
Adult Male Accessory Gland		99.4
Adult Carcass		60.8
Expression Level Scale		None Low Moderate High Very high

Heatmap
Tissue		Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level	Tissue	Adult Expression Level
NA	Head	131.3
NA	Eye	170.4
NA	Brain	351.4
255.25	Central Nervous System	NA
NA	Thoracic-Abdominal Ganglion	417.8
NA	Crop	90.2
136.1	Midgut	127.1
89.5	Hindgut	75
85.6	Malpighian Tubules	108.3
78.9	Fat Body	61
136	Salivary Gland	121.6
NA	Heart	58.825
71.95	Trachea	NA
NA	VirginFemale Spermatheca	111.3
NA	InseminatedFemale Spermatheca	113.6
NA	Ovary	215.7
NA	Testis	88.3
NA	Male Accessory Gland	99.4
70.95	Carcass	60.8

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)

Expression Clusters

A cluster of genes with similar mRNA expression dynamics across development.

(The modENCODE Consortium, 2010)

mE2_34_mRNA_expression_cluster_01

External Data & Images

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0052226

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

•

CG32226-RA

Alleles & Phenotypes

Summary of Allele Phenotypes

Lethality

Allele

viable, with Scer\GAL4^pnr-MD237

CG32226^GD10822

Phenotype manifest in

Allele

Classical Alleles ( 0 )

For All Classical Alleles Show

Allele of CG32226	Class	Mutagen	Stocks	Known lesion

Alleles Carried on Transgenic Constructs ( 3 )

For All Alleles Carried on Transgenic Constructs Show

Allele of CG32226	Mutagen	Stocks	Known lesion
CG32226^GD10822	in vitro construct - RNAi in vitro construct - regulatory fusion	2	Yes
CG32226^HMS01359	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG32226^KK100942	in vitro construct - RNAi in vitro construct - regulatory fusion	0	Yes

Aneuploid Aberrations

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

UAS construct

P{GD10822}

P{KK100942}

P{TRiP.HMS01359}

Insertions

Type of insertions

Name

Expression data

Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )

There is no information supporting a biological process term for this gene.

(Based on a review of available data on: 2008-05-16)

Terms Based on Experimental Evidence ( 0 terms )

Terms Based on Predictions or Assertions ( 2 terms )

Molecular Function

CV term

Evidence

References

sugar binding

inferred from electronic annotation with InterPro:IPR001079

(FlyBase Curators et al., 2004-)

Biological Process ( 0 terms)

Cellular Component

CV term

Evidence

References

integral to membrane

inferred from electronic annotation with InterPro:IPR006614

(FlyBase Curators et al., 2004-)

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Interactions & Pathways

Summary of Physical Interactions

Protein-protein

Interacting group

Assay

References

Summary of Genetic Interactions

Interacts with

Please look at the allele data for full details of the genetic interactions

CG32226 allele

Gene

References

External Data

Linkouts

BioGRID - A database of protein and genetic interactions

•

65492

DroID - A comprehensive database of gene and protein interactions.

•

FBgn0052226

InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.

•

40229

Orthologs

Genome-wide drosophilid orthologs

Dana\GF24474

Dere\GG13329

Dgri\GH16968

Dmoj\GI11832

Dper\GL25042

Dpse\GA16767

Dsec\GM22231

Dsim\GD12202

Dvir\GJ13532

Dwil\GK17237

Dyak\GE22418

Curated drosophilid orthologs

Dmir\CG32226

(Thornton, 2005.12.20)

Dpse\GA16767

Linkouts

InParanoid A subset of ortholog calls from InParanoid.

•

AAEL004196-PA
Aedes aegypti (mosquito)
AGAP004934-PA
Anopheles gambiae (mosquito)
XP_395686.2
Apis mellifera (honey bee)
126520
Branchiostoma floridae (lancelet)
BGIBMGA006831-PA
Bombyx mori (silk worm)
ENSBTAP00000014247
Bos taurus (bovine)
CBP27370
Caenorhabditis briggsae (nematode)
CE23938
Caenorhabditis elegans (worm)
ENSCAFP00000022707
Canis familiaris (dog)
CPIJ004919
Culex pipens (mosquito)
ENSCPOP00000009366
Cavia porcellus (guinea pig)
RP28535
Caenorhabditis remanei (nematode)
ENSECAP00000003684
Equus caballus (horse)
ENSGACP00000012384
Gymnopilus aculeatus (mushroom)
ENSGALP00000005536
Gallus gallus (chicken)
ENSP00000369121
Homo sapiens (human)
190059
Lottia gigantea (owl limpet)
ENSMODP00000010367
Monodelphis domestica (gray opossum)
ENSMMUP00000020305
Macaca mulatta (rhesus monkey)
ENSMUSP00000082844
Mus musculus (house mouse)
124861
Nematostella vectensis (starlet anemone)
XP_001599653.1
Nasonia vitripennis (wasp)
ENSOANP00000003078
Ornithorynchus anatinus (platypus)
ENSORLP00000004219
Oryzias latipes (japanese killifish)
PHUM002049-PA
Pediculus humanus (human body louse)
ENSPPYP00000019453
Pongo pygmaeus (orangutan)
ENSPTRP00000047817
Pan troglodytes (chimpanzee)
ENSRNOP00000001347
Rattus norvegicus (norway rat)
XP_001181379.1
Strongylocentrotus purpuratus (purple sea urchin)
XP_001812825.1
Tribolium castaneum (red flour beetle)
ENSTNIP00000015864
Tetraodon nigroviridis (green spotted pufferfish)
ENSTRUP00000043072
Takifugu rubripes (pufferfish Takifugu)
ENSXETP00000051840
Xenopus tropicalis (frog)

OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.

Stocks & Reagents

Stocks Listed in FlyBase ( 3 )

Bloomington

34370

y¹ sc^* v¹; P{TRiP.HMS01359}attP2/TM3, Sb¹

VDRC

v34464

w¹¹¹⁸; P{GD10822}v34464

v35807

w¹¹¹⁸; P{GD10822}v35807

Genomic Clones ( 1 )

BACR16G09

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones ( 2 )

Please Note

This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA Clones, Fully Sequenced

BDGP DGC clones

Other clones

LD16905

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

18270

RNAi & Array Information

Linkouts

DRSC - Results from RNAi screens.

•

FBgn0052226

GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents

•

40229

Antibody Information

Other Information

Discoverer

Etymology

Identification

Relationship to Other Genes

Source for database identity of

Source for database merge of

Source for merge of: CG18565 CG6468

(FlyBase, 1996-)

Additional comments

Annotations CG18565, CG6468 merged as CG32226 in release 3 of the genome annotation.

(FlyBase Genome Annotators, 2002-2003)

Source for merge of CG18565 CG6468 was a shared cDNA (date:010720).

(FlyBase, 1996-)

Other Comments

External Crossreferences & Linkouts

Sequence Crossreferences

RefSeq (Transcripts)

•

NM_168841

RefSeq (Proteins)

•

NP_730508

DDBJ / EMBL / GenBank

•

Entrez Gene - A searchable database of RefSeq genes.

•

40229

UniProtKB/TrEMBL

•

Q9VWB0

Other Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

Galectin, carbohydrate recognition domain (IPR001079)

Ferlin/Peroxisome membrane (IPR006614)

Beta-propeller repeat TECPR (IPR006624)

Concanavalin A-like lectin/glucanase (IPR008985)

Concanavalin A-like lectin/glucanase, subgroup (IPR013320)

Integral peroxisomal membrane peroxin (IPR010482)

Linkouts

BioGRID - A database of protein and genetic interactions

•

65492

DroID - A comprehensive database of gene and protein interactions.

•

FBgn0052226

DRSC - Results from RNAi screens.

•

FBgn0052226

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0052226

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

•

CG32226-RA

FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans

•

FBgn0052226

GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents

•

40229

InParanoid A subset of ortholog calls from InParanoid.

•

AAEL004196-PA
Aedes aegypti (mosquito)
AGAP004934-PA
Anopheles gambiae (mosquito)
XP_395686.2
Apis mellifera (honey bee)
126520
Branchiostoma floridae (lancelet)
BGIBMGA006831-PA
Bombyx mori (silk worm)
ENSBTAP00000014247
Bos taurus (bovine)
CBP27370
Caenorhabditis briggsae (nematode)
CE23938
Caenorhabditis elegans (worm)
ENSCAFP00000022707
Canis familiaris (dog)
CPIJ004919
Culex pipens (mosquito)
ENSCPOP00000009366
Cavia porcellus (guinea pig)
RP28535
Caenorhabditis remanei (nematode)
ENSECAP00000003684
Equus caballus (horse)
ENSGACP00000012384
Gymnopilus aculeatus (mushroom)
ENSGALP00000005536
Gallus gallus (chicken)
ENSP00000369121
Homo sapiens (human)
190059
Lottia gigantea (owl limpet)
ENSMODP00000010367
Monodelphis domestica (gray opossum)
ENSMMUP00000020305
Macaca mulatta (rhesus monkey)
ENSMUSP00000082844
Mus musculus (house mouse)
124861
Nematostella vectensis (starlet anemone)
XP_001599653.1
Nasonia vitripennis (wasp)
ENSOANP00000003078
Ornithorynchus anatinus (platypus)
ENSORLP00000004219
Oryzias latipes (japanese killifish)
PHUM002049-PA
Pediculus humanus (human body louse)
ENSPPYP00000019453
Pongo pygmaeus (orangutan)
ENSPTRP00000047817
Pan troglodytes (chimpanzee)
ENSRNOP00000001347
Rattus norvegicus (norway rat)
XP_001181379.1
Strongylocentrotus purpuratus (purple sea urchin)
XP_001812825.1
Tribolium castaneum (red flour beetle)
ENSTNIP00000015864
Tetraodon nigroviridis (green spotted pufferfish)
ENSTRUP00000043072
Takifugu rubripes (pufferfish Takifugu)
ENSXETP00000051840
Xenopus tropicalis (frog)

InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.

•

40229

modMine - Data generated by the modENCODE project.

•

FBgn0052226

OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.

Synonyms & Secondary IDs ( 3 )

Reported As

Symbol Synonym

CG6468

(Ponting et al., 2001, )

CG18565

(Cooper, 2002, )

CG32226

(Ni et al., 2010.12.1, Keleman et al., 2009.8.5)

Name Synonym

Secondary FlyBase IDs

FBgn0036965
FBgn0036966

References ( 17 )

Research paper

Mast et al., 2011, Dis. Model Mech. 4(5): 659--672: A Drosophila model for the Zellweger spectrum of peroxisome biogenesis disorders. [FBrf0215017]
Ponting et al., 2001, Genome Res. 11(12): 1996--2008: Novel protein domains and repeats in Drosophila melanogaster: insights into structure, function, and evolution. [FBrf0141558]

Supplementary material

The modENCODE Consortium, 2010, Science 330(6012):: DataS14: Gene co-expression clusters. [FBrf0213979]
Mummery-Widmer et al., 2009, Nature 458(7241):: Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Giot et al., 2003, Science 302(5651):: Tables S1 to S7. [FBrf0166452]

Review

Cooper, 2002, Biochim. biophys. Acta 1572(2-3): 209--231: Galectinomics: finding themes in complexity. [FBrf0155571]

Personal communication to FlyBase

Ni et al., 2010.12.1, A genome-scale shRNA resource for transgenic RNAi in Drosophila.: A genome-scale shRNA resource for transgenic RNAi in Drosophila. [FBrf0212437]
Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center: RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510]
Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center: RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms.: Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]

FlyBase analysis

FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome.: Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886]
FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase.: Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.: FlyBase inference based on genome sequence analysis. [FBrf0104946]
FlyBase, 1992-, FlyBase curation: FlyBase curation. [FBrf0105495]

Computer file

BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.: Berkeley Drosophila Genome Project. [FBrf0125078]

DNA/RNA sequence record

Thornton, 2005.12.20, GenBank/EMBL/DDBJ: DQ334148: Drosophila miranda CG32226 gene, partial cds. [FBrf0197756]

Automatic genome annotation

FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.]: [Annotations performed at the Celera Jamboreee.] [FBrf0126705]