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Gene Dmel\ltl

General Information
Symbol	Dmel\ltl	Species	D. melanogaster
Name	larval translucida	Annotation symbol	CG32372
Feature type	protein_coding_gene	FlyBase ID	FBgn0052372
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	66A3-66A4	Sequence location	3L:7,512,097..7,521,113 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene larval translucida is referred to in FlyBase by the symbol Dmel\ltl (CG32372, FBgn0052372). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: imaginal disc-derived wing vein specification; imaginal disc-derived wing morphogenesis. 17 alleles are reported. The phenotypes of these alleles are annotated with: larva; posterior crossvein; anterior crossvein; wing. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Leucine rich repeat 5; Leucine-rich repeat; Leucine-rich repeat, typical subtype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, during early pupal stages, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult eye, adult heart, larval fat body. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, larval hindgut, adult fat body, adult spermathecae, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1633286_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG32372. Gene sequence location is 3L:7512097..7521113.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 66A3-66A4   Limits computationally determined from genome sequence between P{PZ}l(3)0721708223&P{EP}Rac2EP3118 and P{lacW}Nmtj1C7
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\ltl for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) ltl-RA FBtr0076793  NM_168218   3622   817 ltl-RB FBtr0332144  NM_001274595   4108   817
Additional Transcript Data & Comments
Reported size (kB)	4.7, 4.4 (northern blot) (Casal and Leptin, 1996)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein ltl-PA   FBpp0076507   90.8   817   4.70     NP_729265   AAF50544 ltl-PB   FBpp0304454   90.8   817   4.70     NP_001261524   AGB94219
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Leucine-rich repeat (IPR001611) Leucine-rich repeat, typical subtype (IPR003591) Leucine rich repeat 5 (IPR026906)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA699148   AE014296 AAF50544   AE014296 AGB94219   AI134973   AI293095   AI405912   BI163435   BI168431   BI216842   BI230374   BI370745   BI373101   BT003535 AAO39539   BT044551   BT125759   CK662224   CO188180   CO264201   CO276703   CO278046   CO282504   CO293427   CO299607   CO303028   CO306161   CO307127   CO319071   CO323076   CO323896   CO327595   CO345249   CZ471062   CZ471063   EC060183   EC060876   EC062039   EC063748   EC078487   EC085021   EC194573   EC200521   EC212107   EC244428   EC245593   EC246583   EC252845   EC252933   W91836
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VS84 Q86P15
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References regulatory region FBsf0000436232 3L:7,514,415..7,516,238 evidence=Reporter construct (in vivo) (Sandmann et al., 2007, Halfon, 2012.6.19)
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 4 -- 6   anterior endoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi mesoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi trunk mesoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi embryonic stage 5   mesoderm anlage   (Casal and Leptin, 1996) embryonic stage 6 -- 17   mesoderm   (Casal and Leptin, 1996) embryonic stage 7 -- 8   anterior endoderm anlage   (Fisher et al., 2012) head mesoderm   (Fisher et al., 2012) posterior endoderm   (Fisher et al., 2012) trunk mesoderm   (Fisher et al., 2012) embryonic stage 8   head   (Casal and Leptin, 1996) embryonic stage 9 -- 10   head mesoderm   (Fisher et al., 2012) trunk mesoderm   (Fisher et al., 2012) embryonic stage 11   mesoderm | segmentally repeated   (Casal and Leptin, 1996) embryonic stage 11 -- 12   dorsal pharyngeal muscle primordium   (Fisher et al., 2012) head mesoderm   (Fisher et al., 2012) somatic muscle primordium   (Fisher et al., 2012) trunk mesoderm   (Fisher et al., 2012) embryonic stage 13 -- 16   dorsal pharyngeal muscle   (Fisher et al., 2012) embryonic brain   (Fisher et al., 2012) embryonic/larval fat body   (Fisher et al., 2012) ventral nerve cord   (Fisher et al., 2012) embryonic stage 17   embryonic/larval fat body   (Casal and Leptin, 1996)
Additional Descriptive Data
	Transcripts are expressed in ventral cells of the blastoderm embryo. The posterior border coincides with the posterior limit of the ventral furrow. Anteriorly, expression extends up to the anterior pole. The expression is graded with the peak at the anterior end of the embryo. During germ band extension, expression is strong in the head and much weaker in the invaginated mesoderm. In late stages of germ band extension, new expression occurs in the mesoderm in a segmentally repeated pattern. In late embryos, expression is observed in the fat body. (Casal and Leptin, 1996)
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
extracellular space inferred from direct assay (Szuperák et al., 2011)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult eye, adult heart, larval fat body. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, larval hindgut, adult fat body, adult spermathecae, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    229.15 Larval Midgut    37.6 Larval Hindgut    144.7 Larval Malpighian Tubules    31.5 Larval Fat Body    511.2 Larval Salivary Gland    9.3 Larval Trachea    41.75 Larval Carcass    142.75 Adult Head    388.1 Adult Eye    892.2 Adult Brain    241.2 Adult Thoracic-Abdominal Ganglion    281.7 Adult Crop    10.9 Adult Midgut    2.7 Adult Hindgut    20.3 Adult Malpighian Tubules    6.5 Adult Fat Body    451.5 Adult Salivary Gland    5 Adult Heart    2489.675 Adult VirginFemale Spermatheca    201.4 Adult InseminatedFemale Spermatheca    294.3 Adult Ovary    0.7 Adult Testis    8 Adult Male Accessory Gland    22.8 Adult Carcass    182.2 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    229.15 Larval Midgut    37.6 Larval Hindgut    144.7 Larval Malpighian Tubules    31.5 Larval Fat Body  511.2 Larval Salivary Gland    9.3 Larval Trachea    41.75 Larval Carcass    142.75 Adult Head    388.1 Adult Eye  (892.2) Adult Brain    241.2 Adult Thoracic-Abdominal Ganglion    281.7 Adult Crop    10.9 Adult Midgut    2.7 Adult Hindgut    20.3 Adult Malpighian Tubules    6.5 Adult Fat Body    451.5 Adult Salivary Gland    5 Adult Heart  (2489.675) Adult VirginFemale Spermatheca    201.4 Adult InseminatedFemale Spermatheca    294.3 Adult Ovary    0.7 Adult Testis    8 Adult Male Accessory Gland    22.8 Adult Carcass    182.2 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    229.15 Larval Midgut    37.6 Larval Hindgut    144.7 Larval Malpighian Tubules    31.5 Larval Fat Body    511.2 Larval Salivary Gland    9.3 Larval Trachea    41.75 Larval Carcass    142.75 Adult Head    388.1 Adult Eye    892.2 Adult Brain    241.2 Adult Thoracic-Abdominal Ganglion    281.7 Adult Crop    10.9 Adult Midgut    2.7 Adult Hindgut    20.3 Adult Malpighian Tubules    6.5 Adult Fat Body    451.5 Adult Salivary Gland    5 Adult Heart  (2489.675) Adult VirginFemale Spermatheca    201.4 Adult InseminatedFemale Spermatheca    294.3 Adult Ovary    0.7 Adult Testis    8 Adult Male Accessory Gland    22.8 Adult Carcass    182.2 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    229.15 Larval Midgut    37.6 Larval Hindgut    144.7 Larval Malpighian Tubules    31.5 Larval Fat Body    511.2 Larval Salivary Gland    9.3 Larval Trachea    41.75 Larval Carcass    142.75 Adult Head    388.1 Adult Eye    892.2 Adult Brain    241.2 Adult Thoracic-Abdominal Ganglion    281.7 Adult Crop    10.9 Adult Midgut    2.7 Adult Hindgut    20.3 Adult Malpighian Tubules    6.5 Adult Fat Body    451.5 Adult Salivary Gland    5 Adult Heart    2489.675 Adult VirginFemale Spermatheca    201.4 Adult InseminatedFemale Spermatheca    294.3 Adult Ovary    0.7 Adult Testis    8 Adult Male Accessory Gland    22.8 Adult Carcass    182.2 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    229.15 Larval Midgut    37.6 Larval Hindgut    144.7 Larval Malpighian Tubules    31.5 Larval Fat Body    511.2 Larval Salivary Gland    9.3 Larval Trachea    41.75 Larval Carcass    142.75 Adult Head    388.1 Adult Eye    892.2 Adult Brain    241.2 Adult Thoracic-Abdominal Ganglion    281.7 Adult Crop    10.9 Adult Midgut    2.7 Adult Hindgut    20.3 Adult Malpighian Tubules    6.5 Adult Fat Body    451.5 Adult Salivary Gland    5 Adult Heart    2489.675 Adult VirginFemale Spermatheca    201.4 Adult InseminatedFemale Spermatheca    294.3 Adult Ovary    0.7 Adult Testis    8 Adult Male Accessory Gland    22.8 Adult Carcass    182.2 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    229.15 Larval Midgut    37.6 Larval Hindgut    144.7 Larval Malpighian Tubules    31.5 Larval Fat Body  511.2 Larval Salivary Gland    9.3 Larval Trachea    41.75 Larval Carcass    142.75 Adult Head    388.1 Adult Eye  (892.2) Adult Brain    241.2 Adult Thoracic-Abdominal Ganglion    281.7 Adult Crop    10.9 Adult Midgut    2.7 Adult Hindgut    20.3 Adult Malpighian Tubules    6.5 Adult Fat Body    451.5 Adult Salivary Gland    5 Adult Heart  (2489.675) Adult VirginFemale Spermatheca    201.4 Adult InseminatedFemale Spermatheca    294.3 Adult Ovary    0.7 Adult Testis    8 Adult Male Accessory Gland    22.8 Adult Carcass    182.2 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    229.15 Larval Midgut    37.6 Larval Hindgut    144.7 Larval Malpighian Tubules    31.5 Larval Fat Body    511.2 Larval Salivary Gland    9.3 Larval Trachea    41.75 Larval Carcass    142.75 Adult Head    388.1 Adult Eye    892.2 Adult Brain    241.2 Adult Thoracic-Abdominal Ganglion    281.7 Adult Crop    10.9 Adult Midgut    2.7 Adult Hindgut    20.3 Adult Malpighian Tubules    6.5 Adult Fat Body    451.5 Adult Salivary Gland    5 Adult Heart  (2489.675) Adult VirginFemale Spermatheca    201.4 Adult InseminatedFemale Spermatheca    294.3 Adult Ovary    0.7 Adult Testis    8 Adult Male Accessory Gland    22.8 Adult Carcass    182.2 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    229.15 Larval Midgut    37.6 Larval Hindgut    144.7 Larval Malpighian Tubules    31.5 Larval Fat Body    511.2 Larval Salivary Gland    9.3 Larval Trachea    41.75 Larval Carcass    142.75 Adult Head    388.1 Adult Eye    892.2 Adult Brain    241.2 Adult Thoracic-Abdominal Ganglion    281.7 Adult Crop    10.9 Adult Midgut    2.7 Adult Hindgut    20.3 Adult Malpighian Tubules    6.5 Adult Fat Body    451.5 Adult Salivary Gland    5 Adult Heart    2489.675 Adult VirginFemale Spermatheca    201.4 Adult InseminatedFemale Spermatheca    294.3 Adult Ovary    0.7 Adult Testis    8 Adult Male Accessory Gland    22.8 Adult Carcass    182.2 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    388.1   NA  Eye    892.2   NA  Brain    241.2   229.15  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    281.7   NA  Crop    10.9   37.6  Midgut    2.7   144.7  Hindgut    20.3   31.5  Malpighian Tubules    6.5   511.2  Fat Body    451.5   9.3  Salivary Gland    5   NA  Heart    2489.675   41.75  Trachea    NA   NA  VirginFemale Spermatheca    201.4   NA  InseminatedFemale Spermatheca    294.3   NA  Ovary    0.7   NA  Testis    8   NA  Male Accessory Gland    22.8   142.75  Carcass    182.2 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    21 central nervous system, pupae P8    22 head, virgin 1-day female    63 head, virgin 4-day female    71 head, virgin 20-day female    51 head, mated 1-day female    78 head, mated 4-day female    59 head, mated 20-day female    53 head, mated 1-day male    98 head, mated 4-day male    102 head, mated 20-day male    92 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    14 digestive system, 1-day adult    1 digestive system, 4-day adult    2 digestive system, 20-day adult    1 fat body, larvae L3 wandering    58 fat body, white prepupae    36 fat body, pupae P8    37 carcass, larvae L3 wandering    18 carcass, 1-day adult    26 carcass, 4-day adult    30 carcass, 20-day adult    31 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    21 central nervous system, pupae P8    22 head, virgin 1-day female  (63) head, virgin 4-day female  (71) head, virgin 20-day female  (51) head, mated 1-day female  (78) head, mated 4-day female  (59) head, mated 20-day female  (53) head, mated 1-day male  (98) head, mated 4-day male  (102) head, mated 20-day male  (92) salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    14 digestive system, 1-day adult    1 digestive system, 4-day adult    2 digestive system, 20-day adult    1 fat body, larvae L3 wandering  (58) fat body, white prepupae  (36) fat body, pupae P8  (37) carcass, larvae L3 wandering    18 carcass, 1-day adult  26 carcass, 4-day adult  (30) carcass, 20-day adult  (31) ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    21 central nervous system, pupae P8    22 head, virgin 1-day female    63 head, virgin 4-day female    71 head, virgin 20-day female    51 head, mated 1-day female    78 head, mated 4-day female    59 head, mated 20-day female    53 head, mated 1-day male    98 head, mated 4-day male  102 head, mated 20-day male    92 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    14 digestive system, 1-day adult    1 digestive system, 4-day adult    2 digestive system, 20-day adult    1 fat body, larvae L3 wandering    58 fat body, white prepupae    36 fat body, pupae P8    37 carcass, larvae L3 wandering    18 carcass, 1-day adult    26 carcass, 4-day adult    30 carcass, 20-day adult    31 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    21 central nervous system, pupae P8    22 head, virgin 1-day female    63 head, virgin 4-day female    71 head, virgin 20-day female    51 head, mated 1-day female    78 head, mated 4-day female    59 head, mated 20-day female    53 head, mated 1-day male    98 head, mated 4-day male    102 head, mated 20-day male    92 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    14 digestive system, 1-day adult    1 digestive system, 4-day adult    2 digestive system, 20-day adult    1 fat body, larvae L3 wandering    58 fat body, white prepupae    36 fat body, pupae P8    37 carcass, larvae L3 wandering    18 carcass, 1-day adult    26 carcass, 4-day adult    30 carcass, 20-day adult    31 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    21 central nervous system, pupae P8    22 head, virgin 1-day female    63 head, virgin 4-day female    71 head, virgin 20-day female    51 head, mated 1-day female    78 head, mated 4-day female    59 head, mated 20-day female    53 head, mated 1-day male    98 head, mated 4-day male    102 head, mated 20-day male    92 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    14 digestive system, 1-day adult    1 digestive system, 4-day adult    2 digestive system, 20-day adult    1 fat body, larvae L3 wandering    58 fat body, white prepupae    36 fat body, pupae P8    37 carcass, larvae L3 wandering    18 carcass, 1-day adult    26 carcass, 4-day adult    30 carcass, 20-day adult    31 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    21 central nervous system, pupae P8    22 head, virgin 1-day female  (63) head, virgin 4-day female  (71) head, virgin 20-day female  (51) head, mated 1-day female  (78) head, mated 4-day female  (59) head, mated 20-day female  (53) head, mated 1-day male  (98) head, mated 4-day male  (102) head, mated 20-day male  (92) salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    14 digestive system, 1-day adult    1 digestive system, 4-day adult    2 digestive system, 20-day adult    1 fat body, larvae L3 wandering  (58) fat body, white prepupae  (36) fat body, pupae P8  (37) carcass, larvae L3 wandering    18 carcass, 1-day adult  26 carcass, 4-day adult  30 carcass, 20-day adult  31 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    21 central nervous system, pupae P8    22 head, virgin 1-day female    63 head, virgin 4-day female    71 head, virgin 20-day female    51 head, mated 1-day female    78 head, mated 4-day female    59 head, mated 20-day female    53 head, mated 1-day male    98 head, mated 4-day male  102 head, mated 20-day male    92 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    14 digestive system, 1-day adult    1 digestive system, 4-day adult    2 digestive system, 20-day adult    1 fat body, larvae L3 wandering    58 fat body, white prepupae    36 fat body, pupae P8    37 carcass, larvae L3 wandering    18 carcass, 1-day adult    26 carcass, 4-day adult    30 carcass, 20-day adult    31 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    21 central nervous system, pupae P8    22 head, virgin 1-day female    63 head, virgin 4-day female    71 head, virgin 20-day female    51 head, mated 1-day female    78 head, mated 4-day female    59 head, mated 20-day female    53 head, mated 1-day male    98 head, mated 4-day male    102 head, mated 20-day male    92 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    14 digestive system, 1-day adult    1 digestive system, 4-day adult    2 digestive system, 20-day adult    1 fat body, larvae L3 wandering    58 fat body, white prepupae    36 fat body, pupae P8    37 carcass, larvae L3 wandering    18 carcass, 1-day adult    26 carcass, 4-day adult    30 carcass, 20-day adult    31 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, during early pupal stages, in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    19 embryo 04-06hr    31 embryo 06-08hr    26 embryo 08-10hr    29 embryo 10-12hr    18 embryo 12-14hr    15 embryo 14-16hr    11 embryo 16-18hr    10 embryo 18-20hr    10 embryo 20-22hr    10 embryo 22-24hr    16 larva L1    12 larva L2    10 larva L3 12hr old    8 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    23 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    22 pupae 2d postWPP    9 pupae 3d postWPP    7 pupae 4d postWPP    10 adult male 01day    17 adult male 05day    18 adult male 30day    16 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    19 embryo 04-06hr  (31) embryo 06-08hr  26 embryo 08-10hr  (29) embryo 10-12hr    18 embryo 12-14hr    15 embryo 14-16hr    11 embryo 16-18hr    10 embryo 18-20hr    10 embryo 20-22hr    10 embryo 22-24hr    16 larva L1    12 larva L2    10 larva L3 12hr old    8 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    23 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    22 pupae 2d postWPP    9 pupae 3d postWPP    7 pupae 4d postWPP    10 adult male 01day    17 adult male 05day    18 adult male 30day    16 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    19 embryo 04-06hr    31 embryo 06-08hr    26 embryo 08-10hr    29 embryo 10-12hr    18 embryo 12-14hr    15 embryo 14-16hr    11 embryo 16-18hr    10 embryo 18-20hr    10 embryo 20-22hr    10 embryo 22-24hr    16 larva L1    12 larva L2    10 larva L3 12hr old    8 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    23 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    22 pupae 2d postWPP    9 pupae 3d postWPP    7 pupae 4d postWPP    10 adult male 01day    17 adult male 05day    18 adult male 30day    16 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    19 embryo 04-06hr    31 embryo 06-08hr    26 embryo 08-10hr    29 embryo 10-12hr    18 embryo 12-14hr    15 embryo 14-16hr    11 embryo 16-18hr    10 embryo 18-20hr    10 embryo 20-22hr    10 embryo 22-24hr    16 larva L1    12 larva L2    10 larva L3 12hr old    8 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    23 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    22 pupae 2d postWPP    9 pupae 3d postWPP    7 pupae 4d postWPP    10 adult male 01day    17 adult male 05day    18 adult male 30day    16 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    19 embryo 04-06hr    31 embryo 06-08hr    26 embryo 08-10hr    29 embryo 10-12hr    18 embryo 12-14hr    15 embryo 14-16hr    11 embryo 16-18hr    10 embryo 18-20hr    10 embryo 20-22hr    10 embryo 22-24hr    16 larva L1    12 larva L2    10 larva L3 12hr old    8 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    23 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    22 pupae 2d postWPP    9 pupae 3d postWPP    7 pupae 4d postWPP    10 adult male 01day    17 adult male 05day    18 adult male 30day    16 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    19 embryo 04-06hr  31 embryo 06-08hr  26 embryo 08-10hr  29 embryo 10-12hr    18 embryo 12-14hr    15 embryo 14-16hr    11 embryo 16-18hr    10 embryo 18-20hr    10 embryo 20-22hr    10 embryo 22-24hr    16 larva L1    12 larva L2    10 larva L3 12hr old    8 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    23 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    22 pupae 2d postWPP    9 pupae 3d postWPP    7 pupae 4d postWPP    10 adult male 01day    17 adult male 05day    18 adult male 30day    16 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    19 embryo 04-06hr    31 embryo 06-08hr    26 embryo 08-10hr    29 embryo 10-12hr    18 embryo 12-14hr    15 embryo 14-16hr    11 embryo 16-18hr    10 embryo 18-20hr    10 embryo 20-22hr    10 embryo 22-24hr    16 larva L1    12 larva L2    10 larva L3 12hr old    8 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    23 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    22 pupae 2d postWPP    9 pupae 3d postWPP    7 pupae 4d postWPP    10 adult male 01day    17 adult male 05day    18 adult male 30day    16 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    19 embryo 04-06hr    31 embryo 06-08hr    26 embryo 08-10hr    29 embryo 10-12hr    18 embryo 12-14hr    15 embryo 14-16hr    11 embryo 16-18hr    10 embryo 18-20hr    10 embryo 20-22hr    10 embryo 22-24hr    16 larva L1    12 larva L2    10 larva L3 12hr old    8 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    23 white prepupae new    16 white prepupae 12hr    16 white prepupae 24hr    22 pupae 2d postWPP    9 pupae 3d postWPP    7 pupae 4d postWPP    10 adult male 01day    17 adult male 05day    18 adult male 30day    16 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    0 ovary fGS/OSS    1 ovary OSC    17 ovary OSS    55 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    0 ovary fGS/OSS    1 ovary OSC    17 ovary OSS  (55) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    0 ovary fGS/OSS    1 ovary OSC    17 ovary OSS    55 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    0 ovary fGS/OSS    1 ovary OSC    17 ovary OSS    55 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    0 ovary fGS/OSS    1 ovary OSC    17 ovary OSS    55 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    0 ovary fGS/OSS    1 ovary OSC    17 ovary OSS  (55) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    0 ovary fGS/OSS    1 ovary OSC    17 ovary OSS    55 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    2 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    0 ovary fGS/OSS    1 ovary OSC    17 ovary OSS    55 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    16 cold shock, 4-day adult    13 heat shock, 4-day adult    10 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    14 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    20 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    14 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    13 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    21 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    32 Rotenone 2 μg 12 hrs, larvae L3    9 Rotenone 8 μg 12 hrs, larvae L3    10 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    16 cold shock, 4-day adult    13 heat shock, 4-day adult    10 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    14 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    20 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult  (28) Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    14 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    13 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    21 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult  (32) Rotenone 2 μg 12 hrs, larvae L3    9 Rotenone 8 μg 12 hrs, larvae L3    10 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    16 cold shock, 4-day adult    13 heat shock, 4-day adult    10 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    14 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    20 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    14 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    13 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    21 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    32 Rotenone 2 μg 12 hrs, larvae L3    9 Rotenone 8 μg 12 hrs, larvae L3    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    16 cold shock, 4-day adult    13 heat shock, 4-day adult    10 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    14 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    20 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    14 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    13 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    21 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    32 Rotenone 2 μg 12 hrs, larvae L3    9 Rotenone 8 μg 12 hrs, larvae L3    10 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    16 cold shock, 4-day adult    13 heat shock, 4-day adult    10 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    14 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    20 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    14 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    13 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    21 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    32 Rotenone 2 μg 12 hrs, larvae L3    9 Rotenone 8 μg 12 hrs, larvae L3    10 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    16 cold shock, 4-day adult    13 heat shock, 4-day adult    10 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    14 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    20 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult  28 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    14 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    13 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    21 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult  32 Rotenone 2 μg 12 hrs, larvae L3    9 Rotenone 8 μg 12 hrs, larvae L3    10 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    16 cold shock, 4-day adult    13 heat shock, 4-day adult    10 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    14 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    20 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    14 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    13 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    21 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    32 Rotenone 2 μg 12 hrs, larvae L3    9 Rotenone 8 μg 12 hrs, larvae L3    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    16 cold shock, 4-day adult    13 heat shock, 4-day adult    10 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    14 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    20 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    14 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    13 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    21 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    32 Rotenone 2 μg 12 hrs, larvae L3    9 Rotenone 8 μg 12 hrs, larvae L3    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_11 mE1_20_mRNA_expression_cluster_09
External Data & Images
Linkouts	BDGP expression data • RE09158 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0052372 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG32372-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for ltl Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | larval stage ltl1 ltl2 lethal | pupal stage (with ltl2) ltl3 lethal | pupal stage (with ltl3) ltl2 viable ltlc06895 viable, with Scer\GAL4pnr-MD237 ltlGD5859 viable (with ltl2) ltl4 viable (with ltl4) ltl2 Sterility Allele fertile ltlc06895 Other Phenotypes Allele visible, with Scer\GAL4A9 ltlScer\UAS.cSa ltlScer\UAS.T:Ivir\HA1,T:Zzzz\FLAG visible, with Scer\GAL4en-e16E ltlScer\UAS.cSa visible, with Scer\GAL4hh-Gal4 ltlC.Scer\UAS.T:Avic\GFP visible (with ltl1) ltl4 visible (with ltl2) ltl4 visible (with ltl4) ltl1 ltl2 visible | somatic clone ltl2 Phenotype manifest in Allele anterior crossvein, with Scer\GAL4A9 ltlScer\UAS.cSa larva (with ltl2) ltl3 larva (with ltl3) ltl2 posterior crossvein, with Scer\GAL4A9 ltlScer\UAS.cSa posterior crossvein, with Scer\GAL4en-e16E ltlScer\UAS.cSa posterior crossvein, with Scer\GAL4hh-Gal4 ltlC.Scer\UAS.T:Avic\GFP posterior crossvein | somatic clone ltl2 wing, with Scer\GAL4A9 ltlScer\UAS.cSa ltlScer\UAS.T:Ivir\HA1,T:Zzzz\FLAG wing, with Scer\GAL4en-e16E ltlScer\UAS.cSa wing, with Scer\GAL4hh-Gal4 ltlC.Scer\UAS.T:Avic\GFP wing (with ltl1) ltl4 wing (with ltl2) ltl4 wing (with ltl4) ltl1 ltl2 wing | somatic clone ltl2 wing vein | ectopic (with ltl1) ltl4 wing vein | ectopic (with ltl2) ltl4 wing vein | ectopic (with ltl4) ltl1 ltl2 wing vein L2 | somatic clone ltl2
Classical Alleles ( 9 )
For All Classical Alleles Show
Allele of ltl Class Mutagen Stocks Known lesion ltlc06895 piggyBac transposase 2 -- ltlMB01691 1 -- ltlMI02191 1 -- ltl1 ethyl methanesulfonate 0 Yes ltl2 ethyl methanesulfonate 0 Yes ltl3 ethyl methanesulfonate 0 Yes ltl4 ethyl methanesulfonate 0 Yes ltlc06943 0 -- ltlN ethyl methanesulfonate 0 --
Alleles Carried on Transgenic Constructs ( 8 )
For All Alleles Carried on Transgenic Constructs Show
Allele of ltl Class Mutagen Stocks Known lesion ltlGD5859 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes ltlHM05205 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes ltlC.Scer\UAS.T:Avic\GFP in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes ltlhs.PH in vitro construct - regulatory fusion 0 Yes ltlN.Scer\UAS.T:Avic\GFP in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes ltlNIG.32372R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes ltlScer\UAS.cSa in vitro construct - regulatory fusion 0 Yes ltlScer\UAS.T:Ivir\HA1,T:Zzzz\FLAG in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3L)D26 (Szuperák et al., 2011) Df(3L)Exel8104 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{NIG.32372R} NA P{UAS-ltl.HA-2XFLAG} NA P{UAS-ltl.S} NA P{UAS-ltl-gfp-C} NA P{UAS-N-gfp-ltl} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions Mi{MIC}ltlMI02191 NA PBac{PB}ltlc06895 NA PBac{PB}ltlc06943 NA insertion of enhancer trap binary system Mi{ET1}ltlMB01691 No
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 3 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
imaginal disc-derived wing morphogenesis inferred from mutant phenotype (Szuperák et al., 2011) imaginal disc-derived wing vein specification inferred from mutant phenotype (Szuperák et al., 2011)
Cellular Component
CV term Evidence References
extracellular space inferred from direct assay (Szuperák et al., 2011)
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
ltl - dlp anti bait coimmunoprecipitation, western blot (Szuperák et al., 2011)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions ltl allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 64282 DroID - A comprehensive database of gene and protein interactions. • FBgn0052372 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38845
Orthologs
OrthoDB Orthologs (29) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG65MNQS Dipteran inclusive ortholog search EOG6C5CSR Insect inclusive ortholog search EOG6WSV5S Arthropod inclusive ortholog search EOG622810 Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG65MNQS)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\ltl     Drosophila simulans   Dsim\GD14023 Y   Drosophila sechellia   Dsec\GM14853 Y   Drosophila erecta   Dere\GG14437 Y   Drosophila yakuba   Dyak\GE21627 Y   Drosophila ananassae   Dana\GF10651 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA16850 Y   Drosophila persimilis   Dper\GL26536 Y   Drosophila willistoni   Dwil\GK17391 Y   Drosophila virilis   Dvir\GJ13011 Y   Drosophila mojavensis   Dmoj\GI12870 Y   Drosophila grimshawi   Dgri\GH14894 Y
Orthologs in non-Drosophila Dipterans (EOG6C5CSR)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL007087   Anopheles gambiae Malaria mosquito  Agam\AGAP005962   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ008965
Orthologs in non-Dipteran Insects (EOG6WSV5S)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\LOC408888   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG017764   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH15394   Atta cephalotes Leafcutter ant  Acep\ACEP16810   Camponotus floridanus Florida carpenter ant  Cflo\CFLO20633   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL19642   Linepithema humile Argentine ant  Lhum\LH24215   Pogonomyrmex barbatus Red harvester ant  Pbar\PB11833   Solenopsis invicta Red fire ant  Sinv\SINV17395   Acyrthosiphon pisum Pea aphid  Apim\ACYPI004906   Bombyx mori Silkmoth  Bmor\BGIBMGA000544   Pediculus humanus Human body louse  Phum\PHUM020080   Tribolium castaneum Red flour beetle  Tcas\TC002411
Orthologs in non-Insect Arthropods (EOG622810)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Ixodes scapularis Deer tick  Isca\ISCW004495
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD14023 Drosophila sechellia Dsec\GM14853 Drosophila erecta Dere\GG14437 Drosophila yakuba Dyak\GE21627 Drosophila ananassae Dana\GF10651 Drosophila pseudoobscura pseudoobscura Dpse\GA16850 Drosophila persimilis Dper\GL26536 Drosophila willistoni Dwil\GK17391 Drosophila virilis Dvir\GJ13011 Drosophila mojavensis Dmoj\GI12870 Drosophila grimshawi Dgri\GH14894
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	17786 w1118; PBac{PB}ltlc06895 23342 y1 w67c23; Mi{ET1}ltlMB01691 29527 y1 v1; P{TRiP.HM05205}attP2/TM3, Sb1 34289 y1 w*; Mi{MIC}ltlMI02191/TM3, Sb1 Ser1
Harvard	- PBac{PB}ltlc06895
VDRC	v18977 w1118; P{GD5859}v18977
Genomic Clones ( 1 )
	BACR10H23 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 42 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE09158
Other clones	FI03225 RT10325
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH12573 GH16185 GH26065 HL07801 LP22272 RE02819 RE10172 RE24124 RE57477 RE60318
Other clones	680 17036 29790 43980 44946 50131 61835 64090 65574 73513 175116 214283.73 214437.80 CK01.8B.H12 EK038258 EK121856 EK128612 EK137947 EK160622 EK175926 EK185412 EK189623 EK191836 EK202911 EK250409 EK253701 EK276146 EP07630 EP21701
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0052372 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38845
Antibody Information
	polyclonal (Szuperák et al., 2011)
Other Information
Discoverer
Etymology
	The gene is named "larval translucida" based on the translucent, edemic appearance of mutant larvae. (Szuperák et al., 2011)
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: ltl CG32372 (Szuperák et al., 2011)
Source for database merge of	Source for merge of: CG14836 CG7545 (FlyBase Genome Annotators, 2002-2003) Source for merge of: CG32372 anon-EST:CL1a11 (FlyBase, 1996-)
Additional comments	Annotations CG14836 and CG7545 merged as CG32372 in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003) Source for merge of CG32372 anon-EST:CL1a11 was sequence comparison (date:030620). (FlyBase, 1996-)
Other Comments
	ChEST reveals this is a target of Mef2. (Junion et al., 2005) Identification: isolated from a subtractive cDNA library enriched in sequences expressed in the mesoderm. (Casal and Leptin, 1996)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_168218 NM_001274595 RefSeq (Proteins) • NP_729265 NP_001261524 DDBJ / EMBL / GenBank • AAF50544 AAO39539 AGB94219 BI168431 BT003535 CZ471062 CZ471063 W91836 Entrez Gene - A searchable database of RefSeq genes. • 38845 UniProtKB/TrEMBL • Q9VS84 Q86P15
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Leucine-rich repeat (IPR001611) Leucine-rich repeat, typical subtype (IPR003591) Leucine rich repeat 5 (IPR026906) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • RE09158
Linkouts
	BioGRID - A database of protein and genetic interactions • 64282 DroID - A comprehensive database of gene and protein interactions. • FBgn0052372 DRSC - Results from RNAi screens. • FBgn0052372 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0052372 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG32372-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0052372 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38845 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38845 modMine - Data generated by the modENCODE project. • FBgn0052372 REDfly - A database of transcriptional regulatory elements. • FBgn0052372
Synonyms & Secondary IDs ( 8 )
Reported As
Symbol Synonym	anon-EST:CL1a11   CG7545 (Junion et al., 2005, ) CG14836   CG32372 (Szuperák et al., 2011, Biemar et al., 2006, Han et al., 2006, Sandmann et al., 2007, Hueber et al., 2007, Junion et al., 2007, Hazelett et al., 2012, Perkins et al., 2009, Tomancak et al., 2007, Japanese National Institute of Genetics, 2012.5.21) CT15760 (Hynes and Zhao, 2000) F (Casal and Leptin, 1996) ltl (Szuperák et al., 2011)
Name Synonym	larval translucida (Szuperák et al., 2011)
Secondary FlyBase IDs
	FBgn0019866 FBgn0035794 FBgn0040836
References ( 34 )
Generate a list of	All references relating to this gene ( 34 )
List References by type	Research paper  ( 11 ) Supplementary material  ( 5 ) Personal communication to FlyBase  ( 10 ) FlyBase analysis  ( 4 ) Stock list  ( 1 ) Website  ( 1 ) Curated genome annotation  ( 2 )
Recent research papers ( 3 )
	Hazelett et al., 2012, G3 (Bethesda) 2(7): 789--802 Comparison of Parallel High-Throughput RNA Sequencing Between Knockout of TDP-43 and Its Overexpression Reveals Primarily Nonreciprocal and Nonoverlapping Gene Expression Changes in the Central Nervous System of Drosophila. [FBrf0219102] Baycin-Hizal et al., 2011, J. Proteome Res. 10(6): 2777--2784 GlycoFly: A Database of Drosophila N-linked Glycoproteins Identified Using SPEG-MS Techniques. [FBrf0213834] Szuperák et al., 2011, Development 138(4): 715--724 Feedback regulation of Drosophila BMP signaling by the novel extracellular protein Larval Translucida. [FBrf0212881] Show all research papers ...