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Gene Dmel\CG32638

General Information
Symbol	Dmel\CG32638	Species	D. melanogaster
Name		Annotation symbol	CG32638
Feature type	protein_coding_gene	FlyBase ID	FBgn0052638
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	11E1-11E1	Sequence location	X:13,016,909..13,022,827 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG32638 (FBgn0052638). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Angiotensin II, type I receptor-associated. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 06-12 hour embryonic stages, at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: adult eye, larval Malpighian tubules, adult salivary gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, adult fat body, larval salivary gland, larval trachea, adult ovary, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1634787_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG32638. Gene sequence location is X:13016909..13022827.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 11E1-11E1   Limits computationally determined from genome sequence between P{EP}EP1461 and P{EP}CG1640EP1626
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG32638 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.50 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG32638-RB FBtr0300453  NM_167348   1573   159
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG32638-PB   FBpp0289681   17.7   159   6.97     NP_727668   AAN09647
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Angiotensin II, type I receptor-associated (IPR009436)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014298 AAN09647   AI257843   AI532848   BG639693   BI582034   BI582068   BI604802   BT015181   BT133314   CO155305   CO187181   CO191155   CO192807   CO265071   CO271776   CO273286   CO335364   EC071937   EC082785   EC206456   EC233325   EC241372   EC264739   EV584816   EV592123
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8IR72
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: adult eye, larval Malpighian tubules, adult salivary gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, adult fat body, larval salivary gland, larval trachea, adult ovary, adult male reproductive system, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    105.875 Larval Midgut    231.3 Larval Hindgut    458.1 Larval Malpighian Tubules    552.7 Larval Fat Body    95.4 Larval Salivary Gland    481.1 Larval Trachea    292.75 Larval Carcass    273.425 Adult Head    246.5 Adult Eye    569.625 Adult Brain    213.4 Adult Thoracic-Abdominal Ganglion    157.9 Adult Crop    310.5 Adult Midgut    240.8 Adult Hindgut    460.7 Adult Malpighian Tubules    136.6 Adult Fat Body    125.1 Adult Salivary Gland    1284.4 Adult Heart    279.575 Adult VirginFemale Spermatheca    48.4 Adult InseminatedFemale Spermatheca    54.6 Adult Ovary    107.2 Adult Testis    148.3 Adult Male Accessory Gland    137.8 Adult Carcass    179.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    105.875 Larval Midgut    231.3 Larval Hindgut    458.1 Larval Malpighian Tubules  (552.7) Larval Fat Body    95.4 Larval Salivary Gland    481.1 Larval Trachea    292.75 Larval Carcass    273.425 Adult Head    246.5 Adult Eye  (569.625) Adult Brain    213.4 Adult Thoracic-Abdominal Ganglion    157.9 Adult Crop    310.5 Adult Midgut    240.8 Adult Hindgut    460.7 Adult Malpighian Tubules    136.6 Adult Fat Body    125.1 Adult Salivary Gland  (1284.4) Adult Heart    279.575 Adult VirginFemale Spermatheca    48.4 Adult InseminatedFemale Spermatheca    54.6 Adult Ovary    107.2 Adult Testis    148.3 Adult Male Accessory Gland    137.8 Adult Carcass    179.4 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    105.875 Larval Midgut    231.3 Larval Hindgut    458.1 Larval Malpighian Tubules    552.7 Larval Fat Body    95.4 Larval Salivary Gland    481.1 Larval Trachea    292.75 Larval Carcass    273.425 Adult Head    246.5 Adult Eye    569.625 Adult Brain    213.4 Adult Thoracic-Abdominal Ganglion    157.9 Adult Crop    310.5 Adult Midgut    240.8 Adult Hindgut    460.7 Adult Malpighian Tubules    136.6 Adult Fat Body    125.1 Adult Salivary Gland  (1284.4) Adult Heart    279.575 Adult VirginFemale Spermatheca    48.4 Adult InseminatedFemale Spermatheca    54.6 Adult Ovary    107.2 Adult Testis    148.3 Adult Male Accessory Gland    137.8 Adult Carcass    179.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    105.875 Larval Midgut    231.3 Larval Hindgut    458.1 Larval Malpighian Tubules    552.7 Larval Fat Body    95.4 Larval Salivary Gland    481.1 Larval Trachea    292.75 Larval Carcass    273.425 Adult Head    246.5 Adult Eye    569.625 Adult Brain    213.4 Adult Thoracic-Abdominal Ganglion    157.9 Adult Crop    310.5 Adult Midgut    240.8 Adult Hindgut    460.7 Adult Malpighian Tubules    136.6 Adult Fat Body    125.1 Adult Salivary Gland    1284.4 Adult Heart    279.575 Adult VirginFemale Spermatheca    48.4 Adult InseminatedFemale Spermatheca    54.6 Adult Ovary    107.2 Adult Testis    148.3 Adult Male Accessory Gland    137.8 Adult Carcass    179.4 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    105.875 Larval Midgut    231.3 Larval Hindgut    458.1 Larval Malpighian Tubules    552.7 Larval Fat Body    95.4 Larval Salivary Gland    481.1 Larval Trachea    292.75 Larval Carcass    273.425 Adult Head    246.5 Adult Eye    569.625 Adult Brain    213.4 Adult Thoracic-Abdominal Ganglion    157.9 Adult Crop    310.5 Adult Midgut    240.8 Adult Hindgut    460.7 Adult Malpighian Tubules    136.6 Adult Fat Body    125.1 Adult Salivary Gland    1284.4 Adult Heart    279.575 Adult VirginFemale Spermatheca    48.4 Adult InseminatedFemale Spermatheca    54.6 Adult Ovary    107.2 Adult Testis    148.3 Adult Male Accessory Gland    137.8 Adult Carcass    179.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    105.875 Larval Midgut    231.3 Larval Hindgut    458.1 Larval Malpighian Tubules  552.7 Larval Fat Body    95.4 Larval Salivary Gland    481.1 Larval Trachea    292.75 Larval Carcass    273.425 Adult Head    246.5 Adult Eye  569.625 Adult Brain    213.4 Adult Thoracic-Abdominal Ganglion    157.9 Adult Crop    310.5 Adult Midgut    240.8 Adult Hindgut    460.7 Adult Malpighian Tubules    136.6 Adult Fat Body    125.1 Adult Salivary Gland  (1284.4) Adult Heart    279.575 Adult VirginFemale Spermatheca    48.4 Adult InseminatedFemale Spermatheca    54.6 Adult Ovary    107.2 Adult Testis    148.3 Adult Male Accessory Gland    137.8 Adult Carcass    179.4 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    105.875 Larval Midgut    231.3 Larval Hindgut    458.1 Larval Malpighian Tubules    552.7 Larval Fat Body    95.4 Larval Salivary Gland    481.1 Larval Trachea    292.75 Larval Carcass    273.425 Adult Head    246.5 Adult Eye    569.625 Adult Brain    213.4 Adult Thoracic-Abdominal Ganglion    157.9 Adult Crop    310.5 Adult Midgut    240.8 Adult Hindgut    460.7 Adult Malpighian Tubules    136.6 Adult Fat Body    125.1 Adult Salivary Gland  1284.4 Adult Heart    279.575 Adult VirginFemale Spermatheca    48.4 Adult InseminatedFemale Spermatheca    54.6 Adult Ovary    107.2 Adult Testis    148.3 Adult Male Accessory Gland    137.8 Adult Carcass    179.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    105.875 Larval Midgut    231.3 Larval Hindgut    458.1 Larval Malpighian Tubules    552.7 Larval Fat Body    95.4 Larval Salivary Gland    481.1 Larval Trachea    292.75 Larval Carcass    273.425 Adult Head    246.5 Adult Eye    569.625 Adult Brain    213.4 Adult Thoracic-Abdominal Ganglion    157.9 Adult Crop    310.5 Adult Midgut    240.8 Adult Hindgut    460.7 Adult Malpighian Tubules    136.6 Adult Fat Body    125.1 Adult Salivary Gland    1284.4 Adult Heart    279.575 Adult VirginFemale Spermatheca    48.4 Adult InseminatedFemale Spermatheca    54.6 Adult Ovary    107.2 Adult Testis    148.3 Adult Male Accessory Gland    137.8 Adult Carcass    179.4 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    246.5   NA  Eye    569.625   NA  Brain    213.4   105.875  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    157.9   NA  Crop    310.5   231.3  Midgut    240.8   458.1  Hindgut    460.7   552.7  Malpighian Tubules    136.6   95.4  Fat Body    125.1   481.1  Salivary Gland    1284.4   NA  Heart    279.575   292.75  Trachea    NA   NA  VirginFemale Spermatheca    48.4   NA  InseminatedFemale Spermatheca    54.6   NA  Ovary    107.2   NA  Testis    148.3   NA  Male Accessory Gland    137.8   273.425  Carcass    179.4 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    6 central nervous system, pupae P8    20 head, virgin 1-day female    13 head, virgin 4-day female    13 head, virgin 20-day female    7 head, mated 1-day female    11 head, mated 4-day female    9 head, mated 20-day female    7 head, mated 1-day male    18 head, mated 4-day male    18 head, mated 20-day male    18 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    12 digestive system, 4-day adult    11 digestive system, 20-day adult    11 fat body, larvae L3 wandering    5 fat body, white prepupae    3 fat body, pupae P8    9 carcass, larvae L3 wandering    10 carcass, 1-day adult    9 carcass, 4-day adult    8 carcass, 20-day adult    8 ovary, virgin 4-day female    11 ovary, mated 4-day female    12 testis, mated 4-day male    10 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    6 central nervous system, pupae P8    20 head, virgin 1-day female    13 head, virgin 4-day female    13 head, virgin 20-day female    7 head, mated 1-day female    11 head, mated 4-day female    9 head, mated 20-day female    7 head, mated 1-day male    18 head, mated 4-day male    18 head, mated 20-day male    18 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    12 digestive system, 4-day adult    11 digestive system, 20-day adult    11 fat body, larvae L3 wandering    5 fat body, white prepupae    3 fat body, pupae P8    9 carcass, larvae L3 wandering    10 carcass, 1-day adult    9 carcass, 4-day adult    8 carcass, 20-day adult    8 ovary, virgin 4-day female    11 ovary, mated 4-day female    12 testis, mated 4-day male    10 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    6 central nervous system, pupae P8    20 head, virgin 1-day female    13 head, virgin 4-day female    13 head, virgin 20-day female    7 head, mated 1-day female    11 head, mated 4-day female    9 head, mated 20-day female    7 head, mated 1-day male    18 head, mated 4-day male    18 head, mated 20-day male    18 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    12 digestive system, 4-day adult    11 digestive system, 20-day adult    11 fat body, larvae L3 wandering    5 fat body, white prepupae    3 fat body, pupae P8    9 carcass, larvae L3 wandering    10 carcass, 1-day adult    9 carcass, 4-day adult    8 carcass, 20-day adult    8 ovary, virgin 4-day female    11 ovary, mated 4-day female    12 testis, mated 4-day male    10 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    6 central nervous system, pupae P8    20 head, virgin 1-day female    13 head, virgin 4-day female    13 head, virgin 20-day female    7 head, mated 1-day female    11 head, mated 4-day female    9 head, mated 20-day female    7 head, mated 1-day male    18 head, mated 4-day male    18 head, mated 20-day male    18 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    12 digestive system, 4-day adult    11 digestive system, 20-day adult    11 fat body, larvae L3 wandering    5 fat body, white prepupae    3 fat body, pupae P8    9 carcass, larvae L3 wandering    10 carcass, 1-day adult    9 carcass, 4-day adult    8 carcass, 20-day adult    8 ovary, virgin 4-day female    11 ovary, mated 4-day female    12 testis, mated 4-day male    10 accessory gland, mated 4-day male    14 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    6 central nervous system, pupae P8    20 head, virgin 1-day female    13 head, virgin 4-day female    13 head, virgin 20-day female    7 head, mated 1-day female    11 head, mated 4-day female    9 head, mated 20-day female    7 head, mated 1-day male    18 head, mated 4-day male    18 head, mated 20-day male    18 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    12 digestive system, 4-day adult    11 digestive system, 20-day adult    11 fat body, larvae L3 wandering    5 fat body, white prepupae    3 fat body, pupae P8    9 carcass, larvae L3 wandering    10 carcass, 1-day adult    9 carcass, 4-day adult    8 carcass, 20-day adult    8 ovary, virgin 4-day female    11 ovary, mated 4-day female    12 testis, mated 4-day male    10 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    6 central nervous system, pupae P8    20 head, virgin 1-day female    13 head, virgin 4-day female    13 head, virgin 20-day female    7 head, mated 1-day female    11 head, mated 4-day female    9 head, mated 20-day female    7 head, mated 1-day male    18 head, mated 4-day male    18 head, mated 20-day male    18 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    12 digestive system, 4-day adult    11 digestive system, 20-day adult    11 fat body, larvae L3 wandering    5 fat body, white prepupae    3 fat body, pupae P8    9 carcass, larvae L3 wandering    10 carcass, 1-day adult    9 carcass, 4-day adult    8 carcass, 20-day adult    8 ovary, virgin 4-day female    11 ovary, mated 4-day female    12 testis, mated 4-day male    10 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    6 central nervous system, pupae P8    20 head, virgin 1-day female    13 head, virgin 4-day female    13 head, virgin 20-day female    7 head, mated 1-day female    11 head, mated 4-day female    9 head, mated 20-day female    7 head, mated 1-day male    18 head, mated 4-day male    18 head, mated 20-day male    18 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    12 digestive system, 4-day adult    11 digestive system, 20-day adult    11 fat body, larvae L3 wandering    5 fat body, white prepupae    3 fat body, pupae P8    9 carcass, larvae L3 wandering    10 carcass, 1-day adult    9 carcass, 4-day adult    8 carcass, 20-day adult    8 ovary, virgin 4-day female    11 ovary, mated 4-day female    12 testis, mated 4-day male    10 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    6 central nervous system, pupae P8    20 head, virgin 1-day female    13 head, virgin 4-day female    13 head, virgin 20-day female    7 head, mated 1-day female    11 head, mated 4-day female    9 head, mated 20-day female    7 head, mated 1-day male    18 head, mated 4-day male    18 head, mated 20-day male    18 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    25 digestive system, 1-day adult    12 digestive system, 4-day adult    11 digestive system, 20-day adult    11 fat body, larvae L3 wandering    5 fat body, white prepupae    3 fat body, pupae P8    9 carcass, larvae L3 wandering    10 carcass, 1-day adult    9 carcass, 4-day adult    8 carcass, 20-day adult    8 ovary, virgin 4-day female    11 ovary, mated 4-day female    12 testis, mated 4-day male    10 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 06-12 hour embryonic stages, at stages throughout the pupal period. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    39 embryo 04-06hr    30 embryo 06-08hr    47 embryo 08-10hr    69 embryo 10-12hr    58 embryo 12-14hr    35 embryo 14-16hr    24 embryo 16-18hr    24 embryo 18-20hr    15 embryo 20-22hr    21 embryo 22-24hr    24 larva L1    20 larva L2    17 larva L3 12hr old    24 larva L3 puffstage 1-2    26 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    31 white prepupae new    27 white prepupae 12hr    48 white prepupae 24hr    57 pupae 2d postWPP    57 pupae 3d postWPP    63 pupae 4d postWPP    30 adult male 01day    23 adult male 05day    26 adult male 30day    22 adult female 01day    17 adult female 05day    20 adult female 30day    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (42) embryo 02-04hr  (39) embryo 04-06hr  (30) embryo 06-08hr  (47) embryo 08-10hr  (69) embryo 10-12hr  (58) embryo 12-14hr  (35) embryo 14-16hr    24 embryo 16-18hr    24 embryo 18-20hr    15 embryo 20-22hr    21 embryo 22-24hr    24 larva L1    20 larva L2    17 larva L3 12hr old    24 larva L3 puffstage 1-2  26 larva L3 puffstage 3-6  (30) larva L3 puffstage 7-9  (31) white prepupae new  (27) white prepupae 12hr  (48) white prepupae 24hr  (57) pupae 2d postWPP  (57) pupae 3d postWPP  (63) pupae 4d postWPP  (30) adult male 01day    23 adult male 05day  26 adult male 30day    22 adult female 01day    17 adult female 05day    20 adult female 30day    21 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    39 embryo 04-06hr    30 embryo 06-08hr    47 embryo 08-10hr    69 embryo 10-12hr    58 embryo 12-14hr    35 embryo 14-16hr    24 embryo 16-18hr    24 embryo 18-20hr    15 embryo 20-22hr    21 embryo 22-24hr    24 larva L1    20 larva L2    17 larva L3 12hr old    24 larva L3 puffstage 1-2    26 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    31 white prepupae new    27 white prepupae 12hr    48 white prepupae 24hr    57 pupae 2d postWPP    57 pupae 3d postWPP    63 pupae 4d postWPP    30 adult male 01day    23 adult male 05day    26 adult male 30day    22 adult female 01day    17 adult female 05day    20 adult female 30day    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    39 embryo 04-06hr    30 embryo 06-08hr    47 embryo 08-10hr    69 embryo 10-12hr    58 embryo 12-14hr    35 embryo 14-16hr    24 embryo 16-18hr    24 embryo 18-20hr    15 embryo 20-22hr    21 embryo 22-24hr    24 larva L1    20 larva L2    17 larva L3 12hr old    24 larva L3 puffstage 1-2    26 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    31 white prepupae new    27 white prepupae 12hr    48 white prepupae 24hr    57 pupae 2d postWPP    57 pupae 3d postWPP    63 pupae 4d postWPP    30 adult male 01day    23 adult male 05day    26 adult male 30day    22 adult female 01day    17 adult female 05day    20 adult female 30day    21 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    39 embryo 04-06hr    30 embryo 06-08hr    47 embryo 08-10hr    69 embryo 10-12hr    58 embryo 12-14hr    35 embryo 14-16hr    24 embryo 16-18hr    24 embryo 18-20hr    15 embryo 20-22hr    21 embryo 22-24hr    24 larva L1    20 larva L2    17 larva L3 12hr old    24 larva L3 puffstage 1-2    26 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    31 white prepupae new    27 white prepupae 12hr    48 white prepupae 24hr    57 pupae 2d postWPP    57 pupae 3d postWPP    63 pupae 4d postWPP    30 adult male 01day    23 adult male 05day    26 adult male 30day    22 adult female 01day    17 adult female 05day    20 adult female 30day    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (42) embryo 02-04hr  (39) embryo 04-06hr  30 embryo 06-08hr  (47) embryo 08-10hr  (69) embryo 10-12hr  (58) embryo 12-14hr  (35) embryo 14-16hr    24 embryo 16-18hr    24 embryo 18-20hr    15 embryo 20-22hr    21 embryo 22-24hr    24 larva L1    20 larva L2    17 larva L3 12hr old    24 larva L3 puffstage 1-2  26 larva L3 puffstage 3-6  30 larva L3 puffstage 7-9  31 white prepupae new  27 white prepupae 12hr  (48) white prepupae 24hr  (57) pupae 2d postWPP  (57) pupae 3d postWPP  (63) pupae 4d postWPP  30 adult male 01day    23 adult male 05day  26 adult male 30day    22 adult female 01day    17 adult female 05day    20 adult female 30day    21 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    39 embryo 04-06hr    30 embryo 06-08hr    47 embryo 08-10hr    69 embryo 10-12hr    58 embryo 12-14hr    35 embryo 14-16hr    24 embryo 16-18hr    24 embryo 18-20hr    15 embryo 20-22hr    21 embryo 22-24hr    24 larva L1    20 larva L2    17 larva L3 12hr old    24 larva L3 puffstage 1-2    26 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    31 white prepupae new    27 white prepupae 12hr    48 white prepupae 24hr    57 pupae 2d postWPP    57 pupae 3d postWPP    63 pupae 4d postWPP    30 adult male 01day    23 adult male 05day    26 adult male 30day    22 adult female 01day    17 adult female 05day    20 adult female 30day    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    42 embryo 02-04hr    39 embryo 04-06hr    30 embryo 06-08hr    47 embryo 08-10hr    69 embryo 10-12hr    58 embryo 12-14hr    35 embryo 14-16hr    24 embryo 16-18hr    24 embryo 18-20hr    15 embryo 20-22hr    21 embryo 22-24hr    24 larva L1    20 larva L2    17 larva L3 12hr old    24 larva L3 puffstage 1-2    26 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    31 white prepupae new    27 white prepupae 12hr    48 white prepupae 24hr    57 pupae 2d postWPP    57 pupae 3d postWPP    63 pupae 4d postWPP    30 adult male 01day    23 adult male 05day    26 adult male 30day    22 adult female 01day    17 adult female 05day    20 adult female 30day    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    27 Schneider line 2 Sg4    39 embryonic 1182-4H    17 embryonic GM2    22 embryonic Kc167    9 embryonic S1    10 embryonic S3    27 leg disc CME L1    28 wing disc CME-W2    24 wing disc ML-DmD8    19 wing disc ML-DmD9    15 wing disc ML-DmD16-c3    9 wing disc ML-DmD21    10 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    13 antennal disc ML-DmD20-c5    16 mixed discs ML-DmD4-c1    36 CNS ML-DmBG1-c1    18 CNS ML-DmBG2-c2    26 tumorous blood cells mbn2    19 ovary fGS/OSS    5 ovary OSC    6 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (27) Schneider line 2 Sg4  (39) embryonic 1182-4H    17 embryonic GM2    22 embryonic Kc167    9 embryonic S1    10 embryonic S3  (27) leg disc CME L1  (28) wing disc CME-W2    24 wing disc ML-DmD8    19 wing disc ML-DmD9    15 wing disc ML-DmD16-c3    9 wing disc ML-DmD21    10 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    13 antennal disc ML-DmD20-c5    16 mixed discs ML-DmD4-c1  (36) CNS ML-DmBG1-c1    18 CNS ML-DmBG2-c2  26 tumorous blood cells mbn2    19 ovary fGS/OSS    5 ovary OSC    6 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    27 Schneider line 2 Sg4    39 embryonic 1182-4H    17 embryonic GM2    22 embryonic Kc167    9 embryonic S1    10 embryonic S3    27 leg disc CME L1    28 wing disc CME-W2    24 wing disc ML-DmD8    19 wing disc ML-DmD9    15 wing disc ML-DmD16-c3    9 wing disc ML-DmD21    10 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    13 antennal disc ML-DmD20-c5    16 mixed discs ML-DmD4-c1    36 CNS ML-DmBG1-c1    18 CNS ML-DmBG2-c2    26 tumorous blood cells mbn2    19 ovary fGS/OSS    5 ovary OSC    6 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    27 Schneider line 2 Sg4    39 embryonic 1182-4H    17 embryonic GM2    22 embryonic Kc167    9 embryonic S1    10 embryonic S3    27 leg disc CME L1    28 wing disc CME-W2    24 wing disc ML-DmD8    19 wing disc ML-DmD9    15 wing disc ML-DmD16-c3    9 wing disc ML-DmD21    10 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    13 antennal disc ML-DmD20-c5    16 mixed discs ML-DmD4-c1    36 CNS ML-DmBG1-c1    18 CNS ML-DmBG2-c2    26 tumorous blood cells mbn2    19 ovary fGS/OSS    5 ovary OSC    6 ovary OSS    8 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    27 Schneider line 2 Sg4    39 embryonic 1182-4H    17 embryonic GM2    22 embryonic Kc167    9 embryonic S1    10 embryonic S3    27 leg disc CME L1    28 wing disc CME-W2    24 wing disc ML-DmD8    19 wing disc ML-DmD9    15 wing disc ML-DmD16-c3    9 wing disc ML-DmD21    10 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    13 antennal disc ML-DmD20-c5    16 mixed discs ML-DmD4-c1    36 CNS ML-DmBG1-c1    18 CNS ML-DmBG2-c2    26 tumorous blood cells mbn2    19 ovary fGS/OSS    5 ovary OSC    6 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  27 Schneider line 2 Sg4  (39) embryonic 1182-4H    17 embryonic GM2    22 embryonic Kc167    9 embryonic S1    10 embryonic S3  27 leg disc CME L1  28 wing disc CME-W2    24 wing disc ML-DmD8    19 wing disc ML-DmD9    15 wing disc ML-DmD16-c3    9 wing disc ML-DmD21    10 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    13 antennal disc ML-DmD20-c5    16 mixed discs ML-DmD4-c1  (36) CNS ML-DmBG1-c1    18 CNS ML-DmBG2-c2  26 tumorous blood cells mbn2    19 ovary fGS/OSS    5 ovary OSC    6 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    27 Schneider line 2 Sg4    39 embryonic 1182-4H    17 embryonic GM2    22 embryonic Kc167    9 embryonic S1    10 embryonic S3    27 leg disc CME L1    28 wing disc CME-W2    24 wing disc ML-DmD8    19 wing disc ML-DmD9    15 wing disc ML-DmD16-c3    9 wing disc ML-DmD21    10 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    13 antennal disc ML-DmD20-c5    16 mixed discs ML-DmD4-c1    36 CNS ML-DmBG1-c1    18 CNS ML-DmBG2-c2    26 tumorous blood cells mbn2    19 ovary fGS/OSS    5 ovary OSC    6 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    27 Schneider line 2 Sg4    39 embryonic 1182-4H    17 embryonic GM2    22 embryonic Kc167    9 embryonic S1    10 embryonic S3    27 leg disc CME L1    28 wing disc CME-W2    24 wing disc ML-DmD8    19 wing disc ML-DmD9    15 wing disc ML-DmD16-c3    9 wing disc ML-DmD21    10 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    13 antennal disc ML-DmD20-c5    16 mixed discs ML-DmD4-c1    36 CNS ML-DmBG1-c1    18 CNS ML-DmBG2-c2    26 tumorous blood cells mbn2    19 ovary fGS/OSS    5 ovary OSC    6 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    7 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    15 Cadmium 50 mM 48 hrs, 4-day adult    11 Cadmium 100 mM 48 hrs, 4-day adult    14 Copper 0.5 mM 12 hrs, larvae L3    11 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    10 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    11 Caffeine 1.5 mg/ml 4 hrs, larvae L3    11 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    13 Paraquat 10 mM 48 hrs, 4-day adult    17 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    7 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    7 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    15 Cadmium 50 mM 48 hrs, 4-day adult    11 Cadmium 100 mM 48 hrs, 4-day adult    14 Copper 0.5 mM 12 hrs, larvae L3    11 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    10 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    11 Caffeine 1.5 mg/ml 4 hrs, larvae L3    11 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    13 Paraquat 10 mM 48 hrs, 4-day adult    17 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    7 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    15 Cadmium 50 mM 48 hrs, 4-day adult    11 Cadmium 100 mM 48 hrs, 4-day adult    14 Copper 0.5 mM 12 hrs, larvae L3    11 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    10 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    11 Caffeine 1.5 mg/ml 4 hrs, larvae L3    11 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    13 Paraquat 10 mM 48 hrs, 4-day adult    17 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    7 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    15 Cadmium 50 mM 48 hrs, 4-day adult    11 Cadmium 100 mM 48 hrs, 4-day adult    14 Copper 0.5 mM 12 hrs, larvae L3    11 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    10 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    11 Caffeine 1.5 mg/ml 4 hrs, larvae L3    11 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    13 Paraquat 10 mM 48 hrs, 4-day adult    17 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    7 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    7 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    15 Cadmium 50 mM 48 hrs, 4-day adult    11 Cadmium 100 mM 48 hrs, 4-day adult    14 Copper 0.5 mM 12 hrs, larvae L3    11 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    10 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    11 Caffeine 1.5 mg/ml 4 hrs, larvae L3    11 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    13 Paraquat 10 mM 48 hrs, 4-day adult    17 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    7 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    7 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    15 Cadmium 50 mM 48 hrs, 4-day adult    11 Cadmium 100 mM 48 hrs, 4-day adult    14 Copper 0.5 mM 12 hrs, larvae L3    11 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    10 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    11 Caffeine 1.5 mg/ml 4 hrs, larvae L3    11 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    13 Paraquat 10 mM 48 hrs, 4-day adult    17 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    7 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    15 Cadmium 50 mM 48 hrs, 4-day adult    11 Cadmium 100 mM 48 hrs, 4-day adult    14 Copper 0.5 mM 12 hrs, larvae L3    11 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    10 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    11 Caffeine 1.5 mg/ml 4 hrs, larvae L3    11 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    13 Paraquat 10 mM 48 hrs, 4-day adult    17 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    7 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    15 Cadmium 50 mM 48 hrs, 4-day adult    11 Cadmium 100 mM 48 hrs, 4-day adult    14 Copper 0.5 mM 12 hrs, larvae L3    11 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    10 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    9 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    11 Caffeine 1.5 mg/ml 4 hrs, larvae L3    11 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    13 Paraquat 10 mM 48 hrs, 4-day adult    17 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_25 mE1_20_mRNA_expression_cluster_03
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0052638 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG32638-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 2 )
For All Classical Alleles Show
Allele of CG32638 Class Mutagen Stocks Known lesion CG32638KG07847 1 -- CG32638MI00994 1 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG32638 Class Mutagen Stocks Known lesion CG32638KK109671 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{KK109671} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions Mi{MIC}CG32638MI00994 NA P{SUPor-P}CG32638KG07847 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG32638 - CG12262 experimental knowledge based (Guruharsha et al., 2011) CG32638 - CG2789 anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) CG32638 - CG31523 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG32638 - CG33145 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG32638 - CG33303 experimental knowledge based (Guruharsha et al., 2011) CG32638 - CG9629 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG32638 - Cyp9f2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG32638 - Gmd anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG32638 - Hrd3 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG32638 - Ost48 experimental knowledge based (Guruharsha et al., 2011) CG32638 - frc anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG32638 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 76749 DroID - A comprehensive database of gene and protein interactions. • FBgn0052638 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 318133
Orthologs
OrthoDB Orthologs (27) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG69S6SX Dipteran inclusive ortholog search EOG6Q2DQV Insect inclusive ortholog search EOG65MM2Z Arthropod inclusive ortholog search EOG6JM667 Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG69S6SX)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG32638     Drosophila simulans   Dsim\GD15907 Y   Drosophila sechellia   Dsec\GM11514 Y   Drosophila erecta   Dere\GG19521 Y   Drosophila yakuba   Dyak\GE16176 Y   Drosophila ananassae   Dana\GF21932 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA17035 Y   Drosophila persimilis   Dper\GL14910 Y   Drosophila willistoni   Dwil\GK15843 Y   Drosophila virilis   Dvir\GJ16678 Y   Drosophila mojavensis   Dmoj\GI16189 Y   Drosophila grimshawi   Dgri\GH12035 Y
Orthologs in non-Drosophila Dipterans (EOG6Q2DQV)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL005205   Anopheles gambiae Malaria mosquito  Agam\AGAP000975   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ014064
Orthologs in non-Dipteran Insects (EOG65MM2Z)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\LOC408487   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG015110   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH15779   Atta cephalotes Leafcutter ant  Acep\ACEP22365   Camponotus floridanus Florida carpenter ant  Cflo\CFLO14514   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL17079   Linepithema humile Argentine ant  Lhum\LH22895   Pogonomyrmex barbatus Red harvester ant  Pbar\PB17221   Solenopsis invicta Red fire ant  Sinv\SINV15660   Acyrthosiphon pisum Pea aphid  Apim\ACYPI005945
Orthologs in non-Insect Arthropods (EOG6JM667)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_220411   Ixodes scapularis Deer tick  Isca\ISCW018637
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD15907 Drosophila sechellia Dsec\GM11514 Drosophila erecta Dere\GG19521 Drosophila yakuba Dyak\GE16176 Drosophila ananassae Dana\GF21932 Drosophila pseudoobscura pseudoobscura Dpse\GA17035 Drosophila persimilis Dper\GL14910 Drosophila willistoni Dwil\GK15843 Drosophila virilis Dvir\GJ16678 Drosophila mojavensis Dmoj\GI16189 Drosophila grimshawi Dgri\GH12035
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Bloomington	14664 y1 P{SUPor-P}CG32638KG07847 34137 y1 w* Mi{MIC}CG32638MI00994
VDRC	v104517 P{KK109671}VIE-260B
Genomic Clones ( 1 )
	BACR06C04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 23 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	SD11559
Other clones	FI19011
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	LP06330 RH19896 RH19959 RH70280
Other clones	10520 31788 291897 CK01.31A.F7 CK01.60C.F2 CK01.131B.C2 Dmel_dig_013743_0637_2192 Dmel_neb_010743_0644_1884 EC30239 EC34539 EK026924 EK104602 EK110354 EK141442 EN05812 EN10204 SD04481
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0052638 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 318133
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	snmRNA:204 is derived from the 3' UTR of CG32638. (Yuan et al., 2003) New annotation (CG32638) in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_167348 RefSeq (Proteins) • NP_727668 DDBJ / EMBL / GenBank • AAN09647 AI257843 Entrez Gene - A searchable database of RefSeq genes. • 318133 UniProtKB/TrEMBL • Q8IR72
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Angiotensin II, type I receptor-associated (IPR009436)
Linkouts
	BioGRID - A database of protein and genetic interactions • 76749 DroID - A comprehensive database of gene and protein interactions. • FBgn0052638 DRSC - Results from RNAi screens. • FBgn0052638 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0052638 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG32638-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0052638 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 318133 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 318133 modMine - Data generated by the modENCODE project. • FBgn0052638
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG32638 (Keleman et al., 2009.8.5, Cammarato et al., 2011)
Name Synonym
Secondary FlyBase IDs
References ( 14 )
Research paper	Yuan et al., 2003, Nucleic Acids Res. 31(10): 2495--2507 RNomics in Drosophila melanogaster: identification of 66 candidates for novel non-messenger RNAs. [FBrf0159270]
Supplementary material	Cammarato et al., 2011, PLoS ONE 6(4): Table S1. Proteins & Peptides. [FBrf0214682] Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] Guruharsha et al., 2011, Cell 147(3): Table S3. [FBrf0218395] Khanna et al., 2010, BMC Genomics 11(1): Towards a membrane proteome in Drosophila: a method for the isolation of plasma membrane. [FBrf0210978] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Bellen, 2011.1.31, set919.xml set919.xml [FBrf0212923] Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Mintseris et al., 2009.11.23, DPiM: the Drosophila Protein Interaction Mapping project DPiM: the Drosophila Protein Interaction Mapping project [FBrf0209452] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file) Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
FlyBase analysis	FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955] FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886]