FlyBase Gene Report: Dmel\Muc11A

MUCINS -: Mucin/mucin-like proteins are heavily O-glycosylated proteins characterized by proline, threonine and serine tandem repeats. Mucins form extracellular matrix networks or act as mucosal secretion lubricants. (Adapted from FBrf0205867.)
CHITIN BINDING DOMAIN-CONTAINING PROTEINS -: Chitin binding domains are found in certain classes of chitin binding proteins and chitin-active enzymes. (Adapted from FBrf0108362.)

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the GBrowse view of Dmel\Muc11A or the JBrowse view of Dmel\Muc11A for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Comments on Gene Model

Gene model reviewed during 5.55

Supported by strand-specific RNA-Seq data.

Gene model reviewed during 5.46

Gene model reviewed during 5.51

Gene model reviewed during 6.02

Sequence Ontology: Class of Gene

gene_with_edited_transcript

(Graveley et al., 2011)

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

Muc11A-RB

FBtr0342741

NM_001298221

4865

1552

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

Muc11A-PB

FBpp0309609

142.9

1552

3.74

NP_001285150

AHN59620

Polypeptides with Identical Sequences

There is only one protein coding transcript and one polypeptide associated with this gene

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Muc11A using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Muc11A_1

Linkouts

Gene Ontology (5 terms)

Molecular Function (2 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

chitin binding

inferred from electronic annotation with InterPro:IPR002557

(assigned by InterPro )

(FlyBase Curators et al., 2004-)

extracellular matrix structural constituent

inferred from sequence model

(Syed et al., 2008)

Biological Process (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

chitin metabolic process

inferred from electronic annotation with InterPro:IPR002557

(assigned by InterPro )

(FlyBase Curators et al., 2004-)

Cellular Component (2 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

extracellular matrix

inferred from sequence model

(Syed et al., 2008)

extracellular region

inferred from electronic annotation with InterPro:IPR002557

(assigned by InterPro )

(FlyBase Curators et al., 2004-)

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 13 -- 16

embryonic epipharynx

(Fisher et al., 2012)

embryonic head epidermis

(Fisher et al., 2012)

embryonic hypopharynx

(Fisher et al., 2012)

imaginal tracheal precursor

(Fisher et al., 2012)

embryonic stage 13 -- 17

embryonic/larval salivary gland

(Syed et al., 2008)

RT-PCR

Stage

Tissue/Position (including subcellular localization)

Reference

third instar larval stage

embryonic/larval salivary gland

Comment: weak

(Syed et al., 2008)

embryonic/larval proventriculus

(Syed et al., 2008)

embryonic/larval Malpighian tubule

(Syed et al., 2008)

embryonic/larval fat body

(Syed et al., 2008)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\Muc11A in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\Muc11A

View exonic expression by tissue for Dmel\Muc11A

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0052656

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0052656

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG32656-RA

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG32656

Images

FlyExpress - Embryonic expression images (BDGP data)

Show all FlyExpress processed images for Dmel\Muc11A

Stages(s) 13-16

FlyBase Wiki

Image Based Resources

Alleles, Insertions, and Transgenic Constructs

Classical and Insertion Alleles ( 0 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 4 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of Muc11A

Transgenic constructs containing regulatory region of Muc11A

Deletions and Duplications ( 0 )

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

viable, with Scer\GAL4^Mef2.PR

viable, with Scer\GAL4^pnr-MD237

viable, with Scer\GAL4^tin.CΔ4

Muc11A^GD16761

Phenotype manifest in

Allele

Orthologs

Downloads

Download All DIOPT Orthologs

Download All OrthoDB Orthologs

Human Orthologs (via DIOPT v7.1)

Homo sapiens (Human) (6)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\APOBR

1 of 15

Yes

Hsap\COL1A1

1 of 15

Yes

Hsap\COL1A2

1 of 15

Yes

Hsap\COL9A1

1 of 15

Yes

Hsap\E2F7

1 of 15

Yes

Hsap\E2F8

1 of 15

Yes

Model Organism Orthologs (via DIOPT v7.1)

Mus musculus (laboratory mouse) (4)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Col9a1

1 of 15

Yes

Mmus\Col25a1

1 of 15

Yes

Mmus\E2f7

1 of 15

Yes

Mmus\E2f8

1 of 15

Yes

Rattus norvegicus (Norway rat) (2)

Rnor\E2f7

1 of 13

Yes

Rnor\Prb3

1 of 13

Yes

Xenopus tropicalis (Western clawed frog) (3)

Xtro\col4a5

1 of 12

Yes

Xtro\e2f7

1 of 12

Yes

Xtro\e2f8

1 of 12

Yes

Danio rerio (Zebrafish) (5)

Drer\col8a2

1 of 15

Yes

Drer\col10a1a

1 of 15

Yes

Drer\e2f7

1 of 15

Yes

Drer\e2f8

1 of 15

Yes

Drer\zgc:111983

1 of 15

Yes

Caenorhabditis elegans (Nematode, roundworm) (5)

Cele\clec-122

1 of 15

Yes

Cele\ssq-2

1 of 15

Yes

Cele\ssq-3

1 of 15

Yes

Cele\ssq-4

1 of 15

Yes

Cele\Y53C10A.10

1 of 15

Yes

Arabidopsis thaliana (thale-cress) (2)

Atha\AT1G15830

1 of 9

Yes

Atha\AT1G58220

1 of 9

Yes

Saccharomyces cerevisiae (Brewer's yeast) (1)

Scer\HKR1

1 of 15

Yes

Schizosaccharomyces pombe (Fission yeast) (0)

No records found.

Orthologs in Drosophila Species (via OrthoDB v9.1) ( EOG09190D5P )

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila melanogaster

fruit fly

Dmel\Muc11A

Drosophila suzukii

Spotted wing Drosophila

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila grimshawi

Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( None identified )

No non-Drosophilid orthologies identified

Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W0GQH )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Bombyx mori

Silkmoth

Bmor\BGIBMGA000205

Bombyx mori

Silkmoth

Bmor\BGIBMGA000691

Bombyx mori

Silkmoth

Bmor\BGIBMGA003343

Danaus plexippus

Monarch butterfly

Dple\DPOGS201378-PA

Danaus plexippus

Monarch butterfly

Dple\DPOGS211233-PA

Danaus plexippus

Monarch butterfly

Dple\DPOGS204912-PA

Heliconius melpomene

Postman butterfly

Hmel\HMEL002286

Heliconius melpomene

Postman butterfly

Hmel\HMEL002160

Heliconius melpomene

Postman butterfly

Hmel\HMEL002287

Apis florea

Little honeybee

Aflo\2469504500

Apis mellifera

Western honey bee

Amel\GB42493

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP16685

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP14856

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP13678

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP13363

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP11290

Bombus terrestris

Buff-tailed bumblebee

Bter\15209510

Bombus terrestris

Buff-tailed bumblebee

Bter\15207035

Linepithema humile

Argentine ant

Lhum\LH25917

Linepithema humile

Argentine ant

Lhum\LH20363

Linepithema humile

Argentine ant

Lhum\LH19387

Linepithema humile

Argentine ant

Lhum\LH14085

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:001c59

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:000f19

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:001918

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:0012d7

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:001728

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG021264

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG029938

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG036300

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG023119

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG028265

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG037198

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG032612

Dendroctonus ponderosae

Mountain pine beetle

Dpod\YQE_07799

Tribolium castaneum

Red flour beetle

Tcas\TC011924

Tribolium castaneum

Red flour beetle

Tcas\TC002804

Tribolium castaneum

Red flour beetle

Tcas\TC031463

Tribolium castaneum

Red flour beetle

Tcas\TC014983

Tribolium castaneum

Red flour beetle

Tcas\TC013736

Pediculus humanus

Human body louse

Phum\PHUM566480

Pediculus humanus

Human body louse

Phum\PHUM318970

Pediculus humanus

Human body louse

Phum\PHUM188900

Pediculus humanus

Human body louse

Phum\PHUM616160

Rhodnius prolixus

Kissing bug

Rpro\RPRC002365

Rhodnius prolixus

Kissing bug

Rpro\RPRC007791

Rhodnius prolixus

Kissing bug

Rpro\RPRC006926

Cimex lectularius

Bed bug

Clec\CLEC009824

Cimex lectularius

Bed bug

Clec\CLEC013188

Cimex lectularius

Bed bug

Clec\CLEC005468

Cimex lectularius

Bed bug

Clec\CLEC000564

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI49037

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI087773

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI44642

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI40747

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI004564

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_05422

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_04979

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_12613

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_18690

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_14296

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_15381

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_11886

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_15726

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_08029

Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X00AS )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strigamia maritima

European centipede

Smar\SMAR001199

Strigamia maritima

European centipede

Smar\SMAR003029

Strigamia maritima

European centipede

Smar\SMAR006846

Strigamia maritima

European centipede

Smar\SMAR007958

Strigamia maritima

European centipede

Smar\SMAR007959

Strigamia maritima

European centipede

Smar\SMAR001200

Strigamia maritima

European centipede

Smar\SMAR001935

Strigamia maritima

European centipede

Smar\SMAR003808

Strigamia maritima

European centipede

Smar\SMAR004921

Strigamia maritima

European centipede

Smar\SMAR012168

Strigamia maritima

European centipede

Smar\SMAR006485

Ixodes scapularis

Black-legged tick

Isca\ISCW019314

Ixodes scapularis

Black-legged tick

Isca\ISCW023447

Ixodes scapularis

Black-legged tick

Isca\ISCW024217

Ixodes scapularis

Black-legged tick

Isca\ISCW003265

Ixodes scapularis

Black-legged tick

Isca\ISCW024913

Ixodes scapularis

Black-legged tick

Isca\ISCW021865

Ixodes scapularis

Black-legged tick

Isca\ISCW013779

Ixodes scapularis

Black-legged tick

Isca\ISCW010508

Ixodes scapularis

Black-legged tick

Isca\ISCW001695

Ixodes scapularis

Black-legged tick

Isca\ISCW023951

Ixodes scapularis

Black-legged tick

Isca\ISCW012436

Ixodes scapularis

Black-legged tick

Isca\ISCW003032

Ixodes scapularis

Black-legged tick

Isca\ISCW024259

Ixodes scapularis

Black-legged tick

Isca\ISCW014879

Ixodes scapularis

Black-legged tick

Isca\ISCW013780

Ixodes scapularis

Black-legged tick

Isca\ISCW024847

Ixodes scapularis

Black-legged tick

Isca\ISCW024780

Ixodes scapularis

Black-legged tick

Isca\ISCW017054

Stegodyphus mimosarum

African social velvet spider

Smim\KFM63450.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM81551.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM69006.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM82611.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM82233.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM75618.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM59073.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM79102.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM73209.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM56946.1

Tetranychus urticae

Two-spotted spider mite

Turt\tetur09g03970

Tetranychus urticae

Two-spotted spider mite

Turt\tetur09g04170

Tetranychus urticae

Two-spotted spider mite

Turt\tetur08g00600

Tetranychus urticae

Two-spotted spider mite

Turt\tetur07g00750

Tetranychus urticae

Two-spotted spider mite

Turt\tetur14g01100

Tetranychus urticae

Two-spotted spider mite

Turt\tetur07g00760

Tetranychus urticae

Two-spotted spider mite

Turt\tetur353g00010

Tetranychus urticae

Two-spotted spider mite

Turt\tetur03g08840

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_255690

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_235227

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_117653

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_234884

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_243907

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_236443

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_234319

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_312589

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_234686

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_241216

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_102364

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_268735

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_6999

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_240030

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_239365

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_306655

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_255722

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_241084

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_235946

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_304785

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_252976

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_334348

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_247460

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_237296

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_236499

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_336380

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_243221

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_241122

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_237828

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_301273

Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( None identified )

No non-Arthropod Metazoa orthologies identified

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v7.1)

Drosophila melanogaster (Fruit fly) (1)

Gene Symbol

Score

Source

Alignment

1 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Comments on Models/Modifiers Based on Experimental Evidence ( 0 )

Disease Associations of Human Orthologs (via DIOPT v7.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

Summary of Genetic Interactions

esyN Network Diagram

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0052656

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

32174

Pathways

Gene Group - Pathway Membership (FlyBase)

External Data

Linkouts

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

1-38

Cytogenetic map

11A2-11A3

Sequence location

X:12,059,795..12,065,144 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

11A2-11A3

Limits computationally determined from genome sequence between P{EP}EP1451&P{EP}EP1629 and P{EP}CG11138^EP1313

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

1-38

(FlyBase, 2016)

1-37.7

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (3)

Bloomington

62840

y¹ sc^* v¹ sev²¹; P{TRiP.HMC05134}attP40

VDRC

v101320

P{KK107552}VIE-260B

v24993

w¹¹¹⁸; P{GD8648}v24993

Genomic Clones (11)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (26)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequences

BDGP DGC clones

RE32881

Other clones

LP21747

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0052656

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

LP11046

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0052656

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

32174

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: Muc11A CG32656

(Syed et al., 2008)

Source for database merge of

Additional comments

Other Comments

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 30 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

32174

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0052656

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0052656

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Muc11A_1

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG32656

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

32174

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG32656

modMine - A data warehouse for the modENCODE project

FBgn0052656

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0052656

DRSC - Results frm RNAi screens

FBgn0052656

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0052656

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG32656-RA

FlyMine - An integrated database for Drosophila genomics

FBgn0052656

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

32174

Synonyms and Secondary IDs (4)

Reported As

Symbol Synonym

CG2779

(Vodovar et al., 2005, Wang et al., 2004)

CG32656

(Pankotai et al., 2013, Keleman et al., 2009.8.5, Perkins et al., 2009, Syed et al., 2008)

Muc11A

(Jones et al., 2015, Cordes et al., 2013, Koryakov et al., 2012, Langley et al., 2012, Tokusumi et al., 2012, Syed et al., 2008)

Name Synonyms

CG32656

Muc11A

Mucin 11A

(Syed et al., 2008)

Secondary FlyBase IDs

FBgn0030371

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

References (31)

Report Sections

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