A Database of Drosophila Genes & Genomes

FB2008_07, released August 8, 2008
 

Gene Dmel\4EHP

General Information
SymbolDmel\4EHPSpeciesD. melanogaster
Name4EHPAnnotation symbolCG33100
Feature typeprotein_coding_geneFlyBase IDFBgn0053100
Created / Updated2003-12-01/2003-12-01
Genomic Location
Chromosome (arm)3RRecombination map
Cytogenetic map95E1-95E1Sequence location3R:19,889,511..19,934,671 [-]
Map ( GBrowse ) detailed view
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Automatically generated summary

See sections below for more information
This gene is referred to in FlyBase by the symbol 4EHP (CG33100, FBgn0053100). It has the cytological map location 95E1. Its sequence location is 3R:19889511..19934671. Its molecular function is described as: translation initiation factor activity; protein binding; RNA binding. It is involved in the biological process translational initiation. 25 alleles are reported. The phenotype of these alleles is annotated with embryonic head segment. It has one annotated transcript and one annotated polypeptide.

hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
95E1-95E1  
Limits computationally determined from genome sequence between P{PZ}Atg600096 and P{PZ}Syx1A06737&P{PZ}Syx1A10660  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Molecular Map Data
Gene Order (in direction of increasing cytology)
References
Gene Order (overall orientation not stated)
References
hide Gene Model & Products
Please see the GBrowse view of Dmel\4EHP for information on other features
detailed view FBtr0084541 FBtr0084588 FBtr0084542 FBtr0084587 FBtr0084543 FBtr0084586 FBpp0083926 FBpp0083973 FBpp0083927 FBpp0083972 FBpp0083928 FBpp0083971 FBti0046905 FBti0043933 FBti0067146 FBti0048841 FBti0045620 FBti0069613 FBti0054966 FBti0056247 FBti0050863 FBti0045964 FBti0043256 FBti0066037 FBti0049719 FBti0066036 FBti0059506 FBti0036547 FBti0011389 FBti0002923 FBti0072572 FBti0006117 FBti0100778 FBti0039755 FBti0033822 FBti0050981 FBti0041678 FBti0099954 FBti0017635
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0084587
  1132
  223
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kD)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0083972  
25.8  
223  
7.88  
Additional Polypeptide Data & Comments
Reported size (kD)
Comments
External Data
Linkouts
PANTHER - Protein classification by function, families, and pathways
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
    UniProtKB/TrEMBL
    Maps to
    Does NOT map to
    Identified with
    hide Mapped Features & Mutations
    Please see GBrowse or insertion reports for information on insertions of transgenic constructs and features not listed here
    Type
    Symbol & Location
    Additional Notes
    References
    hide External Data
    Linkouts
    DEDB - Drosophila exon database: splicing graphs
    Crossreferences
    hide Expression Data
    FlyBase-Curated Data
    Transcript and
    Protein data
    Please see the FlyBase Gene Expression Report for details of gene expression from the literature.
    hide Summary of Transcript Expression
    Stage
    Tissue/Position
    Reference
    Marker for
      Subcellular Localization
      CV Term
      hide Summary of Polypeptide Expression
      Stage
      Tissue/Position
      Reference
      Marker for
        Subcellular Localization
        CV Term
        hide Microarray Data
        Developmental timecourse, Costello et al., 2008 (Original data from Arbeitman et al., 2002)
        Untitled Document detailed view FBtr0084541 FBtr0084588 FBtr0084542 FBtr0084587 FBtr0084543 FBtr0084586
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        Linkouts
        FLIGHT - Cell culture data for RNAi and other high-throughput technologies
        FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
        GEO (NCBI) - Gene expression data: microarray and other high-throughput technologies
        hide Alleles & Phenotypes
        hide Summary of Allele Phenotypes
        Lethality
        Allele
        Sterility
        Allele
        Phenotype manifest in
        Allele
        hide Classical Alleles ( 21 )
        For All Classical Alleles Show

        Allele of 4EHPClassMutagenStocksKnown lesion
        4EHP05b
          1 Yes
          4EHP067371 Yes
          4EHP106600 Yes
          4EHPBG017131 --
          4EHPCB054170 Yes
          4EHPCP53hypomorph0 Yes
          4EHPDG10811
            1 --
            4EHPEP32150 Yes
            4EHPEY083691 --
            4EHPc005881 --
            4EHPc020591 --
            4EHPc058411 --
            4EHPc059431 --
            4EHPc067681 --
            4EHPd067951 --
            4EHPe011651 --
            4EHPe031642 --
            4EHPe044171 --
            4EHPe044181 --
            4EHPf028391 --
            4EHPf030381 --
            hide Alleles Carried on Transgenic Constructs ( 4 )
            For All Alleles Carried on Transgenic Constructs Show

            Allele of 4EHPClassMutagenStocksKnown lesion
            4EHPGD70712 Yes
            4EHPScer\UAS.P\T.cCa0 Yes
            4EHPW114A.Scer\UAS.P\T0 Yes
            4EHPW85F.Scer\UAS.P\T0 Yes
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            Useful deficiency
            Useful duplication
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