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Gene Dmel\CG33144

General Information
Symbol	Dmel\CG33144	Species	D. melanogaster
Name		Annotation symbol	CG33144
Feature type	protein_coding_gene	FlyBase ID	FBgn0053144
Gene Model Status	Current	Stock availability	7 publicly available
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	47B9-47B14	Sequence location	2R:6,627,559..6,686,214 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG33144 (FBgn0053144). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: zinc ion binding. The biological processes in which it is involved are not known. 7 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Zinc finger, C6HC-type; Zinc finger, RING-type; Zinc finger, RING-type, conserved site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult salivary gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1640300_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of CG33144. Gene sequence location is 2R:6627559..6686214.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 47B9-47B14   Limits computationally determined from genome sequence between P{PZ}lola00349&P{EP}lolaEP952 and P{lacW}l(2)k00909k00909&P{EP}EP2619EP2619
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG33144 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.49 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG33144-RA FBtr0088254  NM_176144   4539   1102 CG33144-RB FBtr0302517  NM_001201975   5061   1102
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG33144-PA   FBpp0087349   117.0   1102   8.01     NP_788324   AAF58756 CG33144-PB   FBpp0291679   117.0   1102   8.01     NP_001188904   ADV37151
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, RING-type (IPR001841) Zinc finger, C6HC-type (IPR002867) Zinc finger, RING-type, conserved site (IPR017907)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA698516   AE013599 AAF58756   AE013599 ADV37151   AI109488   AI258633   AI387889   AW941714   BF489716   BF497817   BF498884   BI214786   BP549674   BT003306 AAO25066   CK658670   CK660827   CL526174   CO155461   CO269498   CO302865   CO303435   CO306517   CO321568   CO327060   CO330715   CZ470159   EC062973   EC079004   EC082617   EC200497   EC203647   EC214457   EC217093   EC225094   EC249137   EC250906   EC252293   EC260182   GH749275   GH750126   GH752536   GH752869   GH753976   GH754272   GH754354   GH754360   GH754667   GH755779   GH756754   GH756841   GH757753   GH758139   GH758758   GH758777   GH759022   GH759878   GH760370   GH771043   GH772417   GH772481   GH773066   GH774228   GH774822   GH775002   GH776866   GH777807   GH778146   GH780437   GH781354   GH782071   GH783518   GH784081   GH787787   GH788224   GH789166   GH789318   GH790818   GH793440   GH794005   GH794737   GH794895   GH795862   GH796228   GH796630   GH796713   GH797894   GH798805   GH798882   GH801014   GH801701   GH801976   GH803362   GH803549   GH804237   GH808292   GH808600   GH808933   GH809867   GH810273   GH810528   GH810875   GH811224   GH811296   GH812351   GH814584   GH814758   GH815225   GH816489   GH816491   GH816915   GH817735   GH818171   GH820521   GH820686   GH820953   GH821055   GH823212   GH824798   GH826038   GH826480   GH826736   GH826990   GH827629   GH828582   GH832308   GH833644   GH834141   GH836769   GH836876   GH837800   GH837929   GH837995   GH839557   GH839679   GH841269   GH841286   GH843012   GH843854   GH844743   GH844936   GH845966   GH846362   GH846564   GH846583   GH846713   GH847032   GH847293   GH847435   GH847533   GH847694   GH847976   GH848972   GH849025   GH849517   GH849830   GH850641   GH851890   GH852053   GH852062   GH852775   GH853063   GH853971   GH854346   GH854851   GH856159   GH857060   GH857585   GH858060   GH861565   GH862840   GH863603   GH865522   GH867185   GH868003   GH868250   GH870840   GH871165   GH871570   GH871984   GH872939   GH873941   GH874066   GH874305   GH874673   GH874716   GH874949   GH877100   GH878532   GH879789   GH880207   GH880294   GH880410   GH881547   GH882033   GH883502   GH883668   GH883782   GH885206   GH887209   GH888405   GH888489   GH888942   GH889392   GH890302   GH891132   GH891287   GH891879   GH892242   GH894954   GH895869   GH896555   GH897285   GH897654   GH897910   GH899264   GH899285   GH899367   GH900750   GH900769   GH901461   GH901598   GH903003   GH903009   GH903122   GH904093   GH904121   GH905240   GH906084   GH906295   GH907718   GH908382   GH908547   GH909251   GH909919   GH911320   GH911397   GH911491   GH911596   GH911815   GH911941   GH914312   GH916423   GH916914   GH917096   GH917311   GH918046   GH918650   GH919110   GH919249   GH919346   GH919828   GH922700   GH923747   GH924944   GH925111   GH925326   GH926155   GH926283   GH927937   GH928156   GH929333   GH930187   GH933456   GH933839   GH934299   GH935617   GH935711   GH936185   GH937527   GH937985   GH938458   GH938739   GH939036   GH939317   GH939528   GH939790   GH940217   GH940490   GH940869   GH941084
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q7JR34
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism | ubiquitous   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 11 -- 12   somatic muscle primordium   (Fisher et al., 2012) Comment:reported as muscle system primordium visceral muscle primordium   (Fisher et al., 2012) Comment:reported as muscle system primordium trunk mesoderm   (Fisher et al., 2012) embryonic stage 13 -- 16   embryonic proventriculus   (Fisher et al., 2012) embryonic/larval fat body   (Fisher et al., 2012) embryonic/larval muscle system   (Fisher et al., 2012) embryonic/larval visceral muscle   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult salivary gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    74.8 Larval Midgut    162.5 Larval Hindgut    254.8 Larval Malpighian Tubules    161.2 Larval Fat Body    32.2 Larval Salivary Gland    76.7 Larval Trachea    68.375 Larval Carcass    132.575 Adult Head    98.5 Adult Eye    122.4 Adult Brain    178.8 Adult Thoracic-Abdominal Ganglion    144.2 Adult Crop    154 Adult Midgut    120.2 Adult Hindgut    216.2 Adult Malpighian Tubules    74 Adult Fat Body    84.4 Adult Salivary Gland    155.6 Adult Heart    87.7 Adult VirginFemale Spermatheca    23.1 Adult InseminatedFemale Spermatheca    22.8 Adult Ovary    72.3 Adult Testis    60.6 Adult Male Accessory Gland    64.6 Adult Carcass    113.3 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    74.8 Larval Midgut    162.5 Larval Hindgut    254.8 Larval Malpighian Tubules    161.2 Larval Fat Body    32.2 Larval Salivary Gland    76.7 Larval Trachea    68.375 Larval Carcass    132.575 Adult Head    98.5 Adult Eye    122.4 Adult Brain    178.8 Adult Thoracic-Abdominal Ganglion    144.2 Adult Crop    154 Adult Midgut    120.2 Adult Hindgut    216.2 Adult Malpighian Tubules    74 Adult Fat Body    84.4 Adult Salivary Gland    155.6 Adult Heart    87.7 Adult VirginFemale Spermatheca    23.1 Adult InseminatedFemale Spermatheca    22.8 Adult Ovary    72.3 Adult Testis    60.6 Adult Male Accessory Gland    64.6 Adult Carcass    113.3 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    74.8 Larval Midgut    162.5 Larval Hindgut    254.8 Larval Malpighian Tubules    161.2 Larval Fat Body    32.2 Larval Salivary Gland    76.7 Larval Trachea    68.375 Larval Carcass    132.575 Adult Head    98.5 Adult Eye    122.4 Adult Brain    178.8 Adult Thoracic-Abdominal Ganglion    144.2 Adult Crop    154 Adult Midgut    120.2 Adult Hindgut    216.2 Adult Malpighian Tubules    74 Adult Fat Body    84.4 Adult Salivary Gland    155.6 Adult Heart    87.7 Adult VirginFemale Spermatheca    23.1 Adult InseminatedFemale Spermatheca    22.8 Adult Ovary    72.3 Adult Testis    60.6 Adult Male Accessory Gland    64.6 Adult Carcass    113.3 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    74.8 Larval Midgut    162.5 Larval Hindgut    254.8 Larval Malpighian Tubules    161.2 Larval Fat Body    32.2 Larval Salivary Gland    76.7 Larval Trachea    68.375 Larval Carcass    132.575 Adult Head    98.5 Adult Eye    122.4 Adult Brain    178.8 Adult Thoracic-Abdominal Ganglion    144.2 Adult Crop    154 Adult Midgut    120.2 Adult Hindgut    216.2 Adult Malpighian Tubules    74 Adult Fat Body    84.4 Adult Salivary Gland    155.6 Adult Heart    87.7 Adult VirginFemale Spermatheca    23.1 Adult InseminatedFemale Spermatheca    22.8 Adult Ovary    72.3 Adult Testis    60.6 Adult Male Accessory Gland    64.6 Adult Carcass    113.3 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    74.8 Larval Midgut    162.5 Larval Hindgut    254.8 Larval Malpighian Tubules    161.2 Larval Fat Body    32.2 Larval Salivary Gland    76.7 Larval Trachea    68.375 Larval Carcass    132.575 Adult Head    98.5 Adult Eye    122.4 Adult Brain    178.8 Adult Thoracic-Abdominal Ganglion    144.2 Adult Crop    154 Adult Midgut    120.2 Adult Hindgut    216.2 Adult Malpighian Tubules    74 Adult Fat Body    84.4 Adult Salivary Gland    155.6 Adult Heart    87.7 Adult VirginFemale Spermatheca    23.1 Adult InseminatedFemale Spermatheca    22.8 Adult Ovary    72.3 Adult Testis    60.6 Adult Male Accessory Gland    64.6 Adult Carcass    113.3 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    74.8 Larval Midgut    162.5 Larval Hindgut    254.8 Larval Malpighian Tubules    161.2 Larval Fat Body    32.2 Larval Salivary Gland    76.7 Larval Trachea    68.375 Larval Carcass    132.575 Adult Head    98.5 Adult Eye    122.4 Adult Brain    178.8 Adult Thoracic-Abdominal Ganglion    144.2 Adult Crop    154 Adult Midgut    120.2 Adult Hindgut    216.2 Adult Malpighian Tubules    74 Adult Fat Body    84.4 Adult Salivary Gland    155.6 Adult Heart    87.7 Adult VirginFemale Spermatheca    23.1 Adult InseminatedFemale Spermatheca    22.8 Adult Ovary    72.3 Adult Testis    60.6 Adult Male Accessory Gland    64.6 Adult Carcass    113.3 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    74.8 Larval Midgut    162.5 Larval Hindgut    254.8 Larval Malpighian Tubules    161.2 Larval Fat Body    32.2 Larval Salivary Gland    76.7 Larval Trachea    68.375 Larval Carcass    132.575 Adult Head    98.5 Adult Eye    122.4 Adult Brain    178.8 Adult Thoracic-Abdominal Ganglion    144.2 Adult Crop    154 Adult Midgut    120.2 Adult Hindgut    216.2 Adult Malpighian Tubules    74 Adult Fat Body    84.4 Adult Salivary Gland    155.6 Adult Heart    87.7 Adult VirginFemale Spermatheca    23.1 Adult InseminatedFemale Spermatheca    22.8 Adult Ovary    72.3 Adult Testis    60.6 Adult Male Accessory Gland    64.6 Adult Carcass    113.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    74.8 Larval Midgut    162.5 Larval Hindgut    254.8 Larval Malpighian Tubules    161.2 Larval Fat Body    32.2 Larval Salivary Gland    76.7 Larval Trachea    68.375 Larval Carcass    132.575 Adult Head    98.5 Adult Eye    122.4 Adult Brain    178.8 Adult Thoracic-Abdominal Ganglion    144.2 Adult Crop    154 Adult Midgut    120.2 Adult Hindgut    216.2 Adult Malpighian Tubules    74 Adult Fat Body    84.4 Adult Salivary Gland    155.6 Adult Heart    87.7 Adult VirginFemale Spermatheca    23.1 Adult InseminatedFemale Spermatheca    22.8 Adult Ovary    72.3 Adult Testis    60.6 Adult Male Accessory Gland    64.6 Adult Carcass    113.3 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    98.5   NA  Eye    122.4   NA  Brain    178.8   74.8  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    144.2   NA  Crop    154   162.5  Midgut    120.2   254.8  Hindgut    216.2   161.2  Malpighian Tubules    74   32.2  Fat Body    84.4   76.7  Salivary Gland    155.6   NA  Heart    87.7   68.375  Trachea    NA   NA  VirginFemale Spermatheca    23.1   NA  InseminatedFemale Spermatheca    22.8   NA  Ovary    72.3   NA  Testis    60.6   NA  Male Accessory Gland    64.6   132.575  Carcass    113.3 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    11 central nervous system, pupae P8    18 head, virgin 1-day female    23 head, virgin 4-day female    19 head, virgin 20-day female    13 head, mated 1-day female    20 head, mated 4-day female    16 head, mated 20-day female    12 head, mated 1-day male    33 head, mated 4-day male    29 head, mated 20-day male    26 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    13 digestive system, larvae L3 wandering    32 digestive system, 1-day adult    17 digestive system, 4-day adult    17 digestive system, 20-day adult    19 fat body, larvae L3 wandering    4 fat body, white prepupae    7 fat body, pupae P8    19 carcass, larvae L3 wandering    24 carcass, 1-day adult    10 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    9 ovary, mated 4-day female    10 testis, mated 4-day male    61 accessory gland, mated 4-day male    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    11 central nervous system, pupae P8    18 head, virgin 1-day female    23 head, virgin 4-day female    19 head, virgin 20-day female    13 head, mated 1-day female    20 head, mated 4-day female    16 head, mated 20-day female    12 head, mated 1-day male  (33) head, mated 4-day male  (29) head, mated 20-day male  26 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    13 digestive system, larvae L3 wandering  (32) digestive system, 1-day adult    17 digestive system, 4-day adult    17 digestive system, 20-day adult    19 fat body, larvae L3 wandering    4 fat body, white prepupae    7 fat body, pupae P8    19 carcass, larvae L3 wandering    24 carcass, 1-day adult    10 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    9 ovary, mated 4-day female    10 testis, mated 4-day male  (61) accessory gland, mated 4-day male    11 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    11 central nervous system, pupae P8    18 head, virgin 1-day female    23 head, virgin 4-day female    19 head, virgin 20-day female    13 head, mated 1-day female    20 head, mated 4-day female    16 head, mated 20-day female    12 head, mated 1-day male    33 head, mated 4-day male    29 head, mated 20-day male    26 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    13 digestive system, larvae L3 wandering    32 digestive system, 1-day adult    17 digestive system, 4-day adult    17 digestive system, 20-day adult    19 fat body, larvae L3 wandering    4 fat body, white prepupae    7 fat body, pupae P8    19 carcass, larvae L3 wandering    24 carcass, 1-day adult    10 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    9 ovary, mated 4-day female    10 testis, mated 4-day male    61 accessory gland, mated 4-day male    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    11 central nervous system, pupae P8    18 head, virgin 1-day female    23 head, virgin 4-day female    19 head, virgin 20-day female    13 head, mated 1-day female    20 head, mated 4-day female    16 head, mated 20-day female    12 head, mated 1-day male    33 head, mated 4-day male    29 head, mated 20-day male    26 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    13 digestive system, larvae L3 wandering    32 digestive system, 1-day adult    17 digestive system, 4-day adult    17 digestive system, 20-day adult    19 fat body, larvae L3 wandering    4 fat body, white prepupae    7 fat body, pupae P8    19 carcass, larvae L3 wandering    24 carcass, 1-day adult    10 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    9 ovary, mated 4-day female    10 testis, mated 4-day male    61 accessory gland, mated 4-day male    11 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    11 central nervous system, pupae P8    18 head, virgin 1-day female    23 head, virgin 4-day female    19 head, virgin 20-day female    13 head, mated 1-day female    20 head, mated 4-day female    16 head, mated 20-day female    12 head, mated 1-day male    33 head, mated 4-day male    29 head, mated 20-day male    26 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    13 digestive system, larvae L3 wandering    32 digestive system, 1-day adult    17 digestive system, 4-day adult    17 digestive system, 20-day adult    19 fat body, larvae L3 wandering    4 fat body, white prepupae    7 fat body, pupae P8    19 carcass, larvae L3 wandering    24 carcass, 1-day adult    10 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    9 ovary, mated 4-day female    10 testis, mated 4-day male    61 accessory gland, mated 4-day male    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    11 central nervous system, pupae P8    18 head, virgin 1-day female    23 head, virgin 4-day female    19 head, virgin 20-day female    13 head, mated 1-day female    20 head, mated 4-day female    16 head, mated 20-day female    12 head, mated 1-day male  (33) head, mated 4-day male  29 head, mated 20-day male  26 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    13 digestive system, larvae L3 wandering  32 digestive system, 1-day adult    17 digestive system, 4-day adult    17 digestive system, 20-day adult    19 fat body, larvae L3 wandering    4 fat body, white prepupae    7 fat body, pupae P8    19 carcass, larvae L3 wandering    24 carcass, 1-day adult    10 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    9 ovary, mated 4-day female    10 testis, mated 4-day male  (61) accessory gland, mated 4-day male    11 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    11 central nervous system, pupae P8    18 head, virgin 1-day female    23 head, virgin 4-day female    19 head, virgin 20-day female    13 head, mated 1-day female    20 head, mated 4-day female    16 head, mated 20-day female    12 head, mated 1-day male    33 head, mated 4-day male    29 head, mated 20-day male    26 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    13 digestive system, larvae L3 wandering    32 digestive system, 1-day adult    17 digestive system, 4-day adult    17 digestive system, 20-day adult    19 fat body, larvae L3 wandering    4 fat body, white prepupae    7 fat body, pupae P8    19 carcass, larvae L3 wandering    24 carcass, 1-day adult    10 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    9 ovary, mated 4-day female    10 testis, mated 4-day male    61 accessory gland, mated 4-day male    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    19 central nervous system, larvae L3    11 central nervous system, pupae P8    18 head, virgin 1-day female    23 head, virgin 4-day female    19 head, virgin 20-day female    13 head, mated 1-day female    20 head, mated 4-day female    16 head, mated 20-day female    12 head, mated 1-day male    33 head, mated 4-day male    29 head, mated 20-day male    26 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    13 digestive system, larvae L3 wandering    32 digestive system, 1-day adult    17 digestive system, 4-day adult    17 digestive system, 20-day adult    19 fat body, larvae L3 wandering    4 fat body, white prepupae    7 fat body, pupae P8    19 carcass, larvae L3 wandering    24 carcass, 1-day adult    10 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    9 ovary, mated 4-day female    10 testis, mated 4-day male    61 accessory gland, mated 4-day male    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed at stages throughout the pupal period. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    4 embryo 04-06hr    2 embryo 06-08hr    4 embryo 08-10hr    8 embryo 10-12hr    14 embryo 12-14hr    11 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    38 embryo 20-22hr    22 embryo 22-24hr    23 larva L1    14 larva L2    8 larva L3 12hr old    10 larva L3 puffstage 1-2    8 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    34 white prepupae new    65 white prepupae 12hr    85 white prepupae 24hr    31 pupae 2d postWPP    57 pupae 3d postWPP    18 pupae 4d postWPP    47 adult male 01day    25 adult male 05day    33 adult male 30day    31 adult female 01day    19 adult female 05day    13 adult female 30day    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    4 embryo 04-06hr    2 embryo 06-08hr    4 embryo 08-10hr    8 embryo 10-12hr    14 embryo 12-14hr    11 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr  (38) embryo 20-22hr    22 embryo 22-24hr    23 larva L1    14 larva L2    8 larva L3 12hr old    10 larva L3 puffstage 1-2    8 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9  (34) white prepupae new  (65) white prepupae 12hr  (85) white prepupae 24hr  (31) pupae 2d postWPP  (57) pupae 3d postWPP    18 pupae 4d postWPP  (47) adult male 01day    25 adult male 05day  (33) adult male 30day  (31) adult female 01day    19 adult female 05day    13 adult female 30day    13 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    4 embryo 04-06hr    2 embryo 06-08hr    4 embryo 08-10hr    8 embryo 10-12hr    14 embryo 12-14hr    11 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    38 embryo 20-22hr    22 embryo 22-24hr    23 larva L1    14 larva L2    8 larva L3 12hr old    10 larva L3 puffstage 1-2    8 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    34 white prepupae new    65 white prepupae 12hr    85 white prepupae 24hr    31 pupae 2d postWPP    57 pupae 3d postWPP    18 pupae 4d postWPP    47 adult male 01day    25 adult male 05day    33 adult male 30day    31 adult female 01day    19 adult female 05day    13 adult female 30day    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    4 embryo 04-06hr    2 embryo 06-08hr    4 embryo 08-10hr    8 embryo 10-12hr    14 embryo 12-14hr    11 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    38 embryo 20-22hr    22 embryo 22-24hr    23 larva L1    14 larva L2    8 larva L3 12hr old    10 larva L3 puffstage 1-2    8 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    34 white prepupae new    65 white prepupae 12hr    85 white prepupae 24hr    31 pupae 2d postWPP    57 pupae 3d postWPP    18 pupae 4d postWPP    47 adult male 01day    25 adult male 05day    33 adult male 30day    31 adult female 01day    19 adult female 05day    13 adult female 30day    13 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    4 embryo 04-06hr    2 embryo 06-08hr    4 embryo 08-10hr    8 embryo 10-12hr    14 embryo 12-14hr    11 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    38 embryo 20-22hr    22 embryo 22-24hr    23 larva L1    14 larva L2    8 larva L3 12hr old    10 larva L3 puffstage 1-2    8 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    34 white prepupae new    65 white prepupae 12hr    85 white prepupae 24hr    31 pupae 2d postWPP    57 pupae 3d postWPP    18 pupae 4d postWPP    47 adult male 01day    25 adult male 05day    33 adult male 30day    31 adult female 01day    19 adult female 05day    13 adult female 30day    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    4 embryo 04-06hr    2 embryo 06-08hr    4 embryo 08-10hr    8 embryo 10-12hr    14 embryo 12-14hr    11 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr  (38) embryo 20-22hr    22 embryo 22-24hr    23 larva L1    14 larva L2    8 larva L3 12hr old    10 larva L3 puffstage 1-2    8 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9  (34) white prepupae new  (65) white prepupae 12hr  (85) white prepupae 24hr  31 pupae 2d postWPP  (57) pupae 3d postWPP    18 pupae 4d postWPP  (47) adult male 01day    25 adult male 05day  (33) adult male 30day  31 adult female 01day    19 adult female 05day    13 adult female 30day    13 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    4 embryo 04-06hr    2 embryo 06-08hr    4 embryo 08-10hr    8 embryo 10-12hr    14 embryo 12-14hr    11 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    38 embryo 20-22hr    22 embryo 22-24hr    23 larva L1    14 larva L2    8 larva L3 12hr old    10 larva L3 puffstage 1-2    8 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    34 white prepupae new    65 white prepupae 12hr    85 white prepupae 24hr    31 pupae 2d postWPP    57 pupae 3d postWPP    18 pupae 4d postWPP    47 adult male 01day    25 adult male 05day    33 adult male 30day    31 adult female 01day    19 adult female 05day    13 adult female 30day    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    4 embryo 04-06hr    2 embryo 06-08hr    4 embryo 08-10hr    8 embryo 10-12hr    14 embryo 12-14hr    11 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    38 embryo 20-22hr    22 embryo 22-24hr    23 larva L1    14 larva L2    8 larva L3 12hr old    10 larva L3 puffstage 1-2    8 larva L3 puffstage 3-6    17 larva L3 puffstage 7-9    34 white prepupae new    65 white prepupae 12hr    85 white prepupae 24hr    31 pupae 2d postWPP    57 pupae 3d postWPP    18 pupae 4d postWPP    47 adult male 01day    25 adult male 05day    33 adult male 30day    31 adult female 01day    19 adult female 05day    13 adult female 30day    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    9 embryonic 1182-4H    11 embryonic GM2    14 embryonic Kc167    7 embryonic S1    7 embryonic S3    4 leg disc CME L1    8 wing disc CME-W2    8 wing disc ML-DmD8    12 wing disc ML-DmD9    8 wing disc ML-DmD16-c3    18 wing disc ML-DmD21    22 wing disc ML-DmD32    11 haltere disc ML-DmD17-c3    20 eye-antennal disc ML-DmD11    8 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    3 ovary fGS/OSS    15 ovary OSC    10 ovary OSS    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    9 embryonic 1182-4H    11 embryonic GM2    14 embryonic Kc167    7 embryonic S1    7 embryonic S3    4 leg disc CME L1    8 wing disc CME-W2    8 wing disc ML-DmD8    12 wing disc ML-DmD9    8 wing disc ML-DmD16-c3    18 wing disc ML-DmD21    22 wing disc ML-DmD32    11 haltere disc ML-DmD17-c3    20 eye-antennal disc ML-DmD11    8 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1  (27) CNS ML-DmBG1-c1  26 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    3 ovary fGS/OSS    15 ovary OSC    10 ovary OSS    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    9 embryonic 1182-4H    11 embryonic GM2    14 embryonic Kc167    7 embryonic S1    7 embryonic S3    4 leg disc CME L1    8 wing disc CME-W2    8 wing disc ML-DmD8    12 wing disc ML-DmD9    8 wing disc ML-DmD16-c3    18 wing disc ML-DmD21    22 wing disc ML-DmD32    11 haltere disc ML-DmD17-c3    20 eye-antennal disc ML-DmD11    8 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    3 ovary fGS/OSS    15 ovary OSC    10 ovary OSS    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    9 embryonic 1182-4H    11 embryonic GM2    14 embryonic Kc167    7 embryonic S1    7 embryonic S3    4 leg disc CME L1    8 wing disc CME-W2    8 wing disc ML-DmD8    12 wing disc ML-DmD9    8 wing disc ML-DmD16-c3    18 wing disc ML-DmD21    22 wing disc ML-DmD32    11 haltere disc ML-DmD17-c3    20 eye-antennal disc ML-DmD11    8 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    3 ovary fGS/OSS    15 ovary OSC    10 ovary OSS    7 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    9 embryonic 1182-4H    11 embryonic GM2    14 embryonic Kc167    7 embryonic S1    7 embryonic S3    4 leg disc CME L1    8 wing disc CME-W2    8 wing disc ML-DmD8    12 wing disc ML-DmD9    8 wing disc ML-DmD16-c3    18 wing disc ML-DmD21    22 wing disc ML-DmD32    11 haltere disc ML-DmD17-c3    20 eye-antennal disc ML-DmD11    8 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    3 ovary fGS/OSS    15 ovary OSC    10 ovary OSS    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    9 embryonic 1182-4H    11 embryonic GM2    14 embryonic Kc167    7 embryonic S1    7 embryonic S3    4 leg disc CME L1    8 wing disc CME-W2    8 wing disc ML-DmD8    12 wing disc ML-DmD9    8 wing disc ML-DmD16-c3    18 wing disc ML-DmD21    22 wing disc ML-DmD32    11 haltere disc ML-DmD17-c3    20 eye-antennal disc ML-DmD11    8 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1  27 CNS ML-DmBG1-c1  26 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    3 ovary fGS/OSS    15 ovary OSC    10 ovary OSS    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    9 embryonic 1182-4H    11 embryonic GM2    14 embryonic Kc167    7 embryonic S1    7 embryonic S3    4 leg disc CME L1    8 wing disc CME-W2    8 wing disc ML-DmD8    12 wing disc ML-DmD9    8 wing disc ML-DmD16-c3    18 wing disc ML-DmD21    22 wing disc ML-DmD32    11 haltere disc ML-DmD17-c3    20 eye-antennal disc ML-DmD11    8 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    3 ovary fGS/OSS    15 ovary OSC    10 ovary OSS    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    9 embryonic 1182-4H    11 embryonic GM2    14 embryonic Kc167    7 embryonic S1    7 embryonic S3    4 leg disc CME L1    8 wing disc CME-W2    8 wing disc ML-DmD8    12 wing disc ML-DmD9    8 wing disc ML-DmD16-c3    18 wing disc ML-DmD21    22 wing disc ML-DmD32    11 haltere disc ML-DmD17-c3    20 eye-antennal disc ML-DmD11    8 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    3 ovary fGS/OSS    15 ovary OSC    10 ovary OSS    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    12 heat shock, 4-day adult    12 Cadmium 50 mM 6 hrs, larvae L3    7 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    8 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    6 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    16 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    4 Rotenone 8 μg 12 hrs, larvae L3    6 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    12 heat shock, 4-day adult    12 Cadmium 50 mM 6 hrs, larvae L3    7 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    8 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    6 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    16 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    4 Rotenone 8 μg 12 hrs, larvae L3    6 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    12 heat shock, 4-day adult    12 Cadmium 50 mM 6 hrs, larvae L3    7 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    8 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    6 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    16 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    4 Rotenone 8 μg 12 hrs, larvae L3    6 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    12 heat shock, 4-day adult    12 Cadmium 50 mM 6 hrs, larvae L3    7 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    8 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    6 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    16 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    4 Rotenone 8 μg 12 hrs, larvae L3    6 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    12 heat shock, 4-day adult    12 Cadmium 50 mM 6 hrs, larvae L3    7 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    8 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    6 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    16 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    4 Rotenone 8 μg 12 hrs, larvae L3    6 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    12 heat shock, 4-day adult    12 Cadmium 50 mM 6 hrs, larvae L3    7 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    8 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    6 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    16 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    4 Rotenone 8 μg 12 hrs, larvae L3    6 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    12 heat shock, 4-day adult    12 Cadmium 50 mM 6 hrs, larvae L3    7 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    8 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    6 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    16 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    4 Rotenone 8 μg 12 hrs, larvae L3    6 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    12 heat shock, 4-day adult    12 Cadmium 50 mM 6 hrs, larvae L3    7 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    8 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    6 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    16 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    13 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    14 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    4 Rotenone 8 μg 12 hrs, larvae L3    6 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_24 mE1_20_mRNA_expression_cluster_15
External Data & Images
Linkouts	BDGP expression data • GH08706 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0053144 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG33144-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG33144 Stages(s) 1-3 Stages(s) 11-12
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | pupal stage, with Scer\GAL4pnr-MD237 CG33144GD7573 viable CG33144EY10001 Sterility Allele fertile CG33144EY10001 Phenotype manifest in Allele
Classical Alleles ( 4 )
For All Classical Alleles Show
Allele of CG33144 Class Mutagen Stocks Known lesion CG33144EY10001 P-element activity 1 -- CG33144KG08822 1 -- CG33144MI01334 1 -- CG33144c05656 piggyBac transposase 0 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG33144 Class Mutagen Stocks Known lesion CG33144GD7573 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG33144GD3731 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG33144KK101512 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD3731} NA P{GD7573} NA P{KK101512} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}CG33144EY10001 NA miscellaneous insertions Mi{MIC}CG33144MI01334 NA P{SUPor-P}CG33144KG08822 NA PBac{PB}CG33144c05656 NA
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
zinc ion binding inferred from electronic annotation with InterPro:IPR001841, InterPro:IPR002867 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG33144 - CG15098 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG33144 - CG2065 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG33144 - Saf-B anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG33144 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 61940 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0053144 DroID - A comprehensive database of gene and protein interactions. • FBgn0053144 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 36131
Orthologs
OrthoDB Orthologs (37) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG63JCQ2 Dipteran inclusive ortholog search EOG66WZHF Insect inclusive ortholog search EOG6TX9MS Arthropod inclusive ortholog search EOG659ZWG Metazoa inclusive ortholog search EOG6CK78V
Orthologs in Drosophila Species (EOG63JCQ2)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG33144     Drosophila simulans   Dsim\GD25960 Y   Drosophila sechellia   Dsec\GM20497 Y   Drosophila erecta   Dere\GG22721 Y   Drosophila yakuba   Dyak\GE13078 Y   Drosophila ananassae   Dana\GF11090 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA17318 Y   Drosophila persimilis   Dper\GL17183     Drosophila persimilis   Dper\GL17184     Drosophila willistoni   Dwil\GK19659 Y   Drosophila virilis   Dvir\GJ20127 Y   Drosophila mojavensis   Dmoj\GI19169     Drosophila mojavensis   Dmoj\GI19170     Drosophila grimshawi   Dgri\GH20614     Drosophila grimshawi   Dgri\GH20615
Orthologs in non-Drosophila Dipterans (EOG66WZHF)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL008515   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL012673   Anopheles gambiae Malaria mosquito  Agam\AGAP005143   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ009954   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ017240   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ015852
Orthologs in non-Dipteran Insects (EOG6TX9MS)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB48417   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG008281   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH13949   Atta cephalotes Leafcutter ant  Acep\ACEP16273   Camponotus floridanus Florida carpenter ant  Cflo\CFLO17747   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL20795   Linepithema humile Argentine ant  Lhum\LH22327   Pogonomyrmex barbatus Red harvester ant  Pbar\PB19599   Solenopsis invicta Red fire ant  Sinv\SINV19521   Acyrthosiphon pisum Pea aphid  Apim\ACYPI003391   Bombyx mori Silkmoth  Bmor\BGIBMGA011614   Pediculus humanus Human body louse  Phum\PHUM467950   Tribolium castaneum Red flour beetle  Tcas\TC002624
Orthologs in non-Insect Arthropods (EOG659ZWG)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_306577   Ixodes scapularis Deer tick  Isca\ISCW016838
Orthologs in non-Arthropod Metazoa (EOG6CK78V)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Danio rerio Zebrafish  Drer\rnf144ab
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (9) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD25960 Drosophila sechellia Dsec\GM20497 Drosophila erecta Dere\GG22721 Drosophila yakuba Dyak\GE13078 Drosophila ananassae Dana\GF11090 Drosophila pseudoobscura pseudoobscura Dpse\GA17318 Drosophila willistoni Dwil\GK19659 Drosophila virilis Dvir\GJ20127 Drosophila grimshawi Dgri\GH24175
Stocks & Reagents
Stocks Listed in FlyBase ( 7 )
Bloomington	32747 y1 w*; Mi{MIC}CG33144MI01334 17630 y1 w67c23; P{EPgy2}CG33144EY10001 15138 y1; P{SUPor-P}CG33144KG08822/CyO; ry506
VDRC	v108583 P{KK101512}VIE-260B v17082 w1118 P{GD7573}v17082 v17081 w1118; P{GD7573}v17081 v48032 w1118; P{GD3731}v48032
Genomic Clones ( 1 )
	BACR08L17 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 274 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH08706
Other clones	DPiM_GH08706
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT12117 AT13294 AT25846 GH18573 LP01868 LP15793 LP19731 RE20911
Other clones	61138 61583 98388 121310 125872 149526 193308 194559 214249.5 214565.41 CK01.115C.C8 CK01.124D.F10 EK094755 EK185046 EK185938 EK241443 EK251308 EK296015 EN06106 EP05644 FGM102G12 HL04845 RP003001710 RP003005183 RP003007384 RP003008633 RP003017439 RP003020468 RP003022964 RP003028289 RP003029463 RP003029843 RP003029895 RP003044294 RP003045082 RP003046878 RP003057916 RP003060422 RP003063134 RP003063247 RP003063685 RP003063754 RP003064731 RP003068147 RP003068436 RP003069526 RP003070543 RP003071408 RP003073393 RP003077246 RP003078975 RP003080693 RP003086988 RP003092400 RP003093051 RP003094813 RP003096071 RP003096662 RP003096735 RP003096888 RP003100357 RP003102439 RP003104386 RP003106688 RP003109694 RP003118576 RP003126539 RP003132865 RP003137760 RP003138241 RP003142732 RP003143010 RP003146565 RP003148943 RP003150694 RP003152517 RP003157872 RP003157909 RP003164368 RP003165222 RP003165358 RP003170422 RP003175477 RP003175498 RP003177218 RP003178650 RP003182440 RP003182463 RP003183522 RP003185106 RP003185937 RP003187622 RP003192089 RP003193619 RP003194153 RP003194261 RP003195354 RP003197031 RP003199528 RP003201635 RP003210033 RP003218621 RP003221077 RP003223949 RP003226397 RP003228942 RP003229207 RP003233103 RP003233245 RP003238416 RP003238672 RP003242271 RP003244922 RP003255094 RP003256612 RP003261578 RP003262866 RP003263639 RP003265315 RP003272075 RP003276377 RP003277128 RP003277567 RP003277849 RP003278028 RP003280142 RP003280472 RP003282870 RP003283025 RP003283217 RP003283964 RP003287833 RP003288436 RP003294139 RP003295025 RP003301535 RP003305671 RP003308474 RP003309978 RP003311002 RP003314046 RP003314313 RP003314682 RP003314798 RP003315124 RP003318573 RP003321331 RP003322785 RP003323506 RP003326593 RP003327053 RP003330750 RP003333470 RP003340509 RP003352465 RP003353801 RP003353852 RP003359954 RP003367069 RP003372843 RP003373588 RP003387370 RP003388835 RP003390461 RP003397336 RP003400201 RP003404992 RP003408800 RP003412808 RP003414757 RP003422134 RP003430115 RP003431302 RP003434670 RP003434844 RP003438895 RP003441724 RP003446380 RP003451140 RP003458367 RP003461600 RP003468470 RP003469570 RP003470544 RP003472242 RP003478193 RP003480232 RP003482069 RP003492087 RP003492136 RP003494832 RP003509089 RP003509209 RP003512582 RP003513033 RP003520438 RP003528316 RP003530391 RP003536857 RP003537907 RP003538264 RP003539504 RP003540373 RP003540500 RP003543634 RP003548056 RP003548378 RP003551134 RP003558204 RP003559837 RP003562074 RP003562863 RP003568311 RP003572010 RP003573275 RP003574085 RP003574760 RP003575305 RP003577226 RP003577954 RP003579565 RP003581154 RP003588932 RP003592566 RP003595292 RP003598955 RP003600807 RP003604113 RP003606466 RP003608619 RP003609508 RP003612086 RP003624820 RP003624972 RP003625900 RP003626549 RP003627256 RP003628524 RP003631465 RP003631979 RP003638227 RP003638249 RP003638548 RP003640979 RP003642145 RP003642186 RP003643415 RP003643897 RP003644948 RP003648938 RP003650586 RP003650877 RP003651679 RP003653779 RP003661705 RP003663324 RP003667127 RP003669854 RP003671493 RP003672940 RP003673877 RP003678182 RP003678891 RP003680984
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0053144 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 36131
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG7621 CG12339 (FlyBase Genome Annotators, 2002-2003)
Additional comments	Annotations CG7621 and CG12339 merged as CG33144 in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_176144 NM_001201975 RefSeq (Proteins) • NP_788324 NP_001188904 DDBJ / EMBL / GenBank • AAF58756 AAO25066 ADV37151 AI109488 AW941714 BT003306 CL526174 CZ470159 Entrez Gene - A searchable database of RefSeq genes. • 36131 UniProtKB/TrEMBL • Q7JR34
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, RING-type (IPR001841) Zinc finger, C6HC-type (IPR002867) Zinc finger, RING-type, conserved site (IPR017907) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • GH08706
Linkouts
	BioGRID - A database of protein and genetic interactions • 61940 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0053144 DroID - A comprehensive database of gene and protein interactions. • FBgn0053144 DRSC - Results from RNAi screens. • FBgn0053144 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0053144 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG33144-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0053144 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 36131 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 36131 modMine - Data generated by the modENCODE project. • FBgn0053144
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	CG7621   CG12339   CG33144 (Keleman et al., 2009.8.5, Bushati et al., 2008, Kim et al., 2005, Birch-Machin et al., 2005)
Name Synonym
Secondary FlyBase IDs
	FBgn0033545 FBgn0033546
References ( 19 )
Research paper	Bushati et al., 2008, Curr. Biol. 18(7): 501--506 Temporal reciprocity of miRNAs and their targets during the maternal-to-zygotic transition in Drosophila. [FBrf0204359] Birch-Machin et al., 2005, Genome Biol. 6(7): R63 Genomic analysis of heat-shock factor targets in Drosophila. [FBrf0187687] Kim et al., 2005, Nat. Immunol. 6(2): 211--218 Downregulation of lipopolysaccharide response in Drosophila by negative crosstalk between the AP1 and NF-kappaB signaling modules. [FBrf0184193]
Supplementary material	Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Bellen, 2010.11.12, Set908.xml Set908.xml [FBrf0212197] Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Mintseris et al., 2009.11.23, DPiM: the Drosophila Protein Interaction Mapping project DPiM: the Drosophila Protein Interaction Mapping project [FBrf0209452] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. (Computer file) Genomic mapping of Exelixis insertion collection. (Computer file) [FBrf0184340] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Gene Disruption Project members, 2001-, (Computer file) (Computer file) [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file) Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
FlyBase analysis	FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955] FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886]
Website	Fisher et al., 2012, BDGP insitu homepage BDGP insitu homepage [FBrf0219073]