Gene Dmel\dpr11

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General Information

Symbol

Dmel\dpr11

Species

D. melanogaster

Name

dpr11

Annotation symbol

CG33202

Feature type

protein_coding_gene

FlyBase ID

FBgn0053202

Gene Model Status

Current

Stock availability

15 publicly available

Also Known As

CG15183

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

83F1-83F4

Sequence location

3R:2,354,891..2,419,052 [-]

Genomic Maps

Select View:

Summary Information

Automatically generated summary

See sections below for more information

The gene dpr11 is referred to in FlyBase by the symbol Dmel\dpr11 (CG33202, FBgn0053202). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process: sensory perception of chemical stimulus. 14 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Immunoglobulin I-set; Immunoglobulin subtype; Immunoglobulin subtype 2; Immunoglobulin-like domain; Immunoglobulin-like fold. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, during late pupal stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult brain. Comments on Affy2 ProbeSet: ProbeSet 1630895_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of dpr11. Gene sequence location is 3R:2354891..2419052.

User Contributed Data

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Recent Updates

Description

What does this section display?

This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).

What does this section not display?

This section does not currently display links that were removed or gene model changes.

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FB2013_03

FB2013_02

All updates

Click here to see a list of all updates to this record from FB2010_08 and on.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

83F1-83F4

Limits computationally determined from genome sequence between P{lacW}cas^j1C2 and P{PZ}lab⁰¹²⁴¹

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

Left of (cM)

Right of (cM)

Notes

Gene Model & Products

Please see the GBrowse view of Dmel\dpr11 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Comments on Gene Model

Gene model reviewed during 5.47

Gene merge based on cDNA data

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

dpr11-RB

FBtr0081704

NM_176409

3519

360

dpr11-RC

FBtr0336453

NM_001275391

4651

360

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

dpr11-PB

FBpp0081202

38.1

360

8.69

NP_788586

AAF54116

dpr11-PC

FBpp0307559

38.1

360

8.69

NP_001262320

AGB95703

Additional Polypeptide Data & Comments

Reported size (kDa)

Comments

External Data

Linkouts

Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

Immunoglobulin subtype 2 (IPR003598)

Immunoglobulin subtype (IPR003599)

Immunoglobulin-like domain (IPR007110)

Immunoglobulin-like fold (IPR013783)

Immunoglobulin I-set (IPR013098)

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

Q8MRE6

Mapped Features

Mapped Features have been reorganized, please see this article for details.

Additional mapped features and mutations can be found on GBrowse or related reports.

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

Crossreferences

Expression Data

Transcript Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization (GO Cellular Component)

CV term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

Reference

See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)

	Styles
	Linear
	Logarithmic
	Heatmap
	Back-to-back
	Scales
	gene max expression
	Moderate expression bin max
	High level expression bin max
	Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult brain.
[download data (TSV)]

Guide to FlyAtlas expression level colors
	No expression (0 - 9.999)
	Low expression (10 - 99.999)
	Moderate expression (100 - 499.999)
	High level expression (500 - 999.999)
	Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue		Expression Level
Larval Central Nervous System		49.3
Larval Midgut		3.3
Larval Hindgut		5.4
Larval Malpighian Tubules		2.4
Larval Fat Body		2
Larval Salivary Gland		6
Larval Trachea		2.975
Larval Carcass		2.35
Adult Head		23.9
Adult Eye		2.425
Adult Brain		131.6
Adult Thoracic-Abdominal Ganglion		84.6
Adult Crop		5.9
Adult Midgut		3.1
Adult Hindgut		2.9
Adult Malpighian Tubules		3.3
Adult Fat Body		8.8
Adult Salivary Gland		8.4
Adult Heart		0.875
Adult VirginFemale Spermatheca		8.3
Adult InseminatedFemale Spermatheca		5.5
Adult Ovary		0.4
Adult Testis		0.7
Adult Male Accessory Gland		0.9
Adult Carcass		6.8
Expression Level Scale		None Low Moderate

Linear, scaled to Moderate expression
Tissue		Expression Level
Larval Central Nervous System		49.3
Larval Midgut		3.3
Larval Hindgut		5.4
Larval Malpighian Tubules		2.4
Larval Fat Body		2
Larval Salivary Gland		6
Larval Trachea		2.975
Larval Carcass		2.35
Adult Head		23.9
Adult Eye		2.425
Adult Brain		131.6
Adult Thoracic-Abdominal Ganglion		84.6
Adult Crop		5.9
Adult Midgut		3.1
Adult Hindgut		2.9
Adult Malpighian Tubules		3.3
Adult Fat Body		8.8
Adult Salivary Gland		8.4
Adult Heart		0.875
Adult VirginFemale Spermatheca		8.3
Adult InseminatedFemale Spermatheca		5.5
Adult Ovary		0.4
Adult Testis		0.7
Adult Male Accessory Gland		0.9
Adult Carcass		6.8
Expression Level Scale		None Low Moderate High

Linear, scaled to High level expression
Tissue		Expression Level
Larval Central Nervous System		49.3
Larval Midgut		3.3
Larval Hindgut		5.4
Larval Malpighian Tubules		2.4
Larval Fat Body		2
Larval Salivary Gland		6
Larval Trachea		2.975
Larval Carcass		2.35
Adult Head		23.9
Adult Eye		2.425
Adult Brain		131.6
Adult Thoracic-Abdominal Ganglion		84.6
Adult Crop		5.9
Adult Midgut		3.1
Adult Hindgut		2.9
Adult Malpighian Tubules		3.3
Adult Fat Body		8.8
Adult Salivary Gland		8.4
Adult Heart		0.875
Adult VirginFemale Spermatheca		8.3
Adult InseminatedFemale Spermatheca		5.5
Adult Ovary		0.4
Adult Testis		0.7
Adult Male Accessory Gland		0.9
Adult Carcass		6.8
Expression Level Scale		None Low Moderate High Very high

Linear, scaled to Very high expression
Tissue		Expression Level
Larval Central Nervous System		49.3
Larval Midgut		3.3
Larval Hindgut		5.4
Larval Malpighian Tubules		2.4
Larval Fat Body		2
Larval Salivary Gland		6
Larval Trachea		2.975
Larval Carcass		2.35
Adult Head		23.9
Adult Eye		2.425
Adult Brain		131.6
Adult Thoracic-Abdominal Ganglion		84.6
Adult Crop		5.9
Adult Midgut		3.1
Adult Hindgut		2.9
Adult Malpighian Tubules		3.3
Adult Fat Body		8.8
Adult Salivary Gland		8.4
Adult Heart		0.875
Adult VirginFemale Spermatheca		8.3
Adult InseminatedFemale Spermatheca		5.5
Adult Ovary		0.4
Adult Testis		0.7
Adult Male Accessory Gland		0.9
Adult Carcass		6.8
Expression Level Scale		Very high

log, scaled to maximum expression level
Tissue		Expression Level
Larval Central Nervous System		49.3
Larval Midgut		3.3
Larval Hindgut		5.4
Larval Malpighian Tubules		2.4
Larval Fat Body		2
Larval Salivary Gland		6
Larval Trachea		2.975
Larval Carcass		2.35
Adult Head		23.9
Adult Eye		2.425
Adult Brain		131.6
Adult Thoracic-Abdominal Ganglion		84.6
Adult Crop		5.9
Adult Midgut		3.1
Adult Hindgut		2.9
Adult Malpighian Tubules		3.3
Adult Fat Body		8.8
Adult Salivary Gland		8.4
Adult Heart		0.875
Adult VirginFemale Spermatheca		8.3
Adult InseminatedFemale Spermatheca		5.5
Adult Ovary		0.4
Adult Testis		0.7
Adult Male Accessory Gland		0.9
Adult Carcass		6.8
Expression Level Scale		None Low Moderate

log, scaled to Moderate expression
Tissue		Expression Level
Larval Central Nervous System		49.3
Larval Midgut		3.3
Larval Hindgut		5.4
Larval Malpighian Tubules		2.4
Larval Fat Body		2
Larval Salivary Gland		6
Larval Trachea		2.975
Larval Carcass		2.35
Adult Head		23.9
Adult Eye		2.425
Adult Brain		131.6
Adult Thoracic-Abdominal Ganglion		84.6
Adult Crop		5.9
Adult Midgut		3.1
Adult Hindgut		2.9
Adult Malpighian Tubules		3.3
Adult Fat Body		8.8
Adult Salivary Gland		8.4
Adult Heart		0.875
Adult VirginFemale Spermatheca		8.3
Adult InseminatedFemale Spermatheca		5.5
Adult Ovary		0.4
Adult Testis		0.7
Adult Male Accessory Gland		0.9
Adult Carcass		6.8
Expression Level Scale		None Low Moderate High

log, scaled to High level expression
Tissue		Expression Level
Larval Central Nervous System		49.3
Larval Midgut		3.3
Larval Hindgut		5.4
Larval Malpighian Tubules		2.4
Larval Fat Body		2
Larval Salivary Gland		6
Larval Trachea		2.975
Larval Carcass		2.35
Adult Head		23.9
Adult Eye		2.425
Adult Brain		131.6
Adult Thoracic-Abdominal Ganglion		84.6
Adult Crop		5.9
Adult Midgut		3.1
Adult Hindgut		2.9
Adult Malpighian Tubules		3.3
Adult Fat Body		8.8
Adult Salivary Gland		8.4
Adult Heart		0.875
Adult VirginFemale Spermatheca		8.3
Adult InseminatedFemale Spermatheca		5.5
Adult Ovary		0.4
Adult Testis		0.7
Adult Male Accessory Gland		0.9
Adult Carcass		6.8
Expression Level Scale		None Low Moderate High Very high

log, scaled to Very high expression
Tissue		Expression Level
Larval Central Nervous System		49.3
Larval Midgut		3.3
Larval Hindgut		5.4
Larval Malpighian Tubules		2.4
Larval Fat Body		2
Larval Salivary Gland		6
Larval Trachea		2.975
Larval Carcass		2.35
Adult Head		23.9
Adult Eye		2.425
Adult Brain		131.6
Adult Thoracic-Abdominal Ganglion		84.6
Adult Crop		5.9
Adult Midgut		3.1
Adult Hindgut		2.9
Adult Malpighian Tubules		3.3
Adult Fat Body		8.8
Adult Salivary Gland		8.4
Adult Heart		0.875
Adult VirginFemale Spermatheca		8.3
Adult InseminatedFemale Spermatheca		5.5
Adult Ovary		0.4
Adult Testis		0.7
Adult Male Accessory Gland		0.9
Adult Carcass		6.8
Expression Level Scale		None Low Moderate High Very high

Heatmap
Tissue		Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level	Tissue	Adult Expression Level
NA	Head	23.9
NA	Eye	2.425
NA	Brain	131.6
49.3	Central Nervous System	NA
NA	Thoracic-Abdominal Ganglion	84.6
NA	Crop	5.9
3.3	Midgut	3.1
5.4	Hindgut	2.9
2.4	Malpighian Tubules	3.3
2	Fat Body	8.8
6	Salivary Gland	8.4
NA	Heart	0.875
2.975	Trachea	NA
NA	VirginFemale Spermatheca	8.3
NA	InseminatedFemale Spermatheca	5.5
NA	Ovary	0.4
NA	Testis	0.7
NA	Male Accessory Gland	0.9
2.35	Carcass	6.8

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)

modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		84
head, virgin 1-day female		10
head, virgin 4-day female		10
head, virgin 20-day female		6
head, mated 1-day female		8
head, mated 4-day female		8
head, mated 20-day female		5
head, mated 1-day male		14
head, mated 4-day male		15
head, mated 20-day male		13
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		1
fat body, pupae P8		10
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		1
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high High

Linear, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		(84)
head, virgin 1-day female		10
head, virgin 4-day female		10
head, virgin 20-day female		6
head, mated 1-day female		8
head, mated 4-day female		8
head, mated 20-day female		5
head, mated 1-day male		14
head, mated 4-day male		15
head, mated 20-day male		13
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		1
fat body, pupae P8		10
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		1
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		84
head, virgin 1-day female		10
head, virgin 4-day female		10
head, virgin 20-day female		6
head, mated 1-day female		8
head, mated 4-day female		8
head, mated 20-day female		5
head, mated 1-day male		14
head, mated 4-day male		15
head, mated 20-day male		13
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		1
fat body, pupae P8		10
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		1
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		84
head, virgin 1-day female		10
head, virgin 4-day female		10
head, virgin 20-day female		6
head, mated 1-day female		8
head, mated 4-day female		8
head, mated 20-day female		5
head, mated 1-day male		14
head, mated 4-day male		15
head, mated 20-day male		13
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		1
fat body, pupae P8		10
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		1
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		84
head, virgin 1-day female		10
head, virgin 4-day female		10
head, virgin 20-day female		6
head, mated 1-day female		8
head, mated 4-day female		8
head, mated 20-day female		5
head, mated 1-day male		14
head, mated 4-day male		15
head, mated 20-day male		13
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		1
fat body, pupae P8		10
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		1
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		(84)
head, virgin 1-day female		10
head, virgin 4-day female		10
head, virgin 20-day female		6
head, mated 1-day female		8
head, mated 4-day female		8
head, mated 20-day female		5
head, mated 1-day male		14
head, mated 4-day male		15
head, mated 20-day male		13
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		1
fat body, pupae P8		10
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		1
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		84
head, virgin 1-day female		10
head, virgin 4-day female		10
head, virgin 20-day female		6
head, mated 1-day female		8
head, mated 4-day female		8
head, mated 20-day female		5
head, mated 1-day male		14
head, mated 4-day male		15
head, mated 20-day male		13
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		1
fat body, pupae P8		10
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		1
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		84
head, virgin 1-day female		10
head, virgin 4-day female		10
head, virgin 20-day female		6
head, mated 1-day female		8
head, mated 4-day female		8
head, mated 20-day female		5
head, mated 1-day male		14
head, mated 4-day male		15
head, mated 20-day male		13
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		2
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		1
fat body, pupae P8		10
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		1
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Tissue		Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male

modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, during late pupal stages.
[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		1
embryo 14-16hr		3
embryo 16-18hr		8
embryo 18-20hr		10
embryo 20-22hr		10
embryo 22-24hr		13
larva L1		11
larva L2		3
larva L3 12hr old		1
larva L3 puffstage 1-2		1
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		3
white prepupae 24hr		5
pupae 2d postWPP		16
pupae 3d postWPP		9
pupae 4d postWPP		3
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate

Linear, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		1
embryo 14-16hr		3
embryo 16-18hr		8
embryo 18-20hr		10
embryo 20-22hr		10
embryo 22-24hr		13
larva L1		11
larva L2		3
larva L3 12hr old		1
larva L3 puffstage 1-2		1
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		3
white prepupae 24hr		5
pupae 2d postWPP		16
pupae 3d postWPP		9
pupae 4d postWPP		3
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		1
embryo 14-16hr		3
embryo 16-18hr		8
embryo 18-20hr		10
embryo 20-22hr		10
embryo 22-24hr		13
larva L1		11
larva L2		3
larva L3 12hr old		1
larva L3 puffstage 1-2		1
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		3
white prepupae 24hr		5
pupae 2d postWPP		16
pupae 3d postWPP		9
pupae 4d postWPP		3
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		1
embryo 14-16hr		3
embryo 16-18hr		8
embryo 18-20hr		10
embryo 20-22hr		10
embryo 22-24hr		13
larva L1		11
larva L2		3
larva L3 12hr old		1
larva L3 puffstage 1-2		1
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		3
white prepupae 24hr		5
pupae 2d postWPP		16
pupae 3d postWPP		9
pupae 4d postWPP		3
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		1
embryo 14-16hr		3
embryo 16-18hr		8
embryo 18-20hr		10
embryo 20-22hr		10
embryo 22-24hr		13
larva L1		11
larva L2		3
larva L3 12hr old		1
larva L3 puffstage 1-2		1
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		3
white prepupae 24hr		5
pupae 2d postWPP		16
pupae 3d postWPP		9
pupae 4d postWPP		3
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate

log, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		1
embryo 14-16hr		3
embryo 16-18hr		8
embryo 18-20hr		10
embryo 20-22hr		10
embryo 22-24hr		13
larva L1		11
larva L2		3
larva L3 12hr old		1
larva L3 puffstage 1-2		1
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		3
white prepupae 24hr		5
pupae 2d postWPP		16
pupae 3d postWPP		9
pupae 4d postWPP		3
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		1
embryo 14-16hr		3
embryo 16-18hr		8
embryo 18-20hr		10
embryo 20-22hr		10
embryo 22-24hr		13
larva L1		11
larva L2		3
larva L3 12hr old		1
larva L3 puffstage 1-2		1
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		3
white prepupae 24hr		5
pupae 2d postWPP		16
pupae 3d postWPP		9
pupae 4d postWPP		3
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		1
embryo 14-16hr		3
embryo 16-18hr		8
embryo 18-20hr		10
embryo 20-22hr		10
embryo 22-24hr		13
larva L1		11
larva L2		3
larva L3 12hr old		1
larva L3 puffstage 1-2		1
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		3
white prepupae 24hr		5
pupae 2d postWPP		16
pupae 3d postWPP		9
pupae 4d postWPP		3
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Developmental Stage		Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day

modENCODE Temporal Expression Data (Graveley et al., 2011)

modENCODE Cell Lines RNA-Seq

modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		2
cold shock, 4-day adult		3
heat shock, 4-day adult		1
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		2
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		2
Paraquat 10 mM 48 hrs, 4-day adult		2
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate

Linear, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		2
cold shock, 4-day adult		3
heat shock, 4-day adult		1
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		2
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		2
Paraquat 10 mM 48 hrs, 4-day adult		2
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		2
cold shock, 4-day adult		3
heat shock, 4-day adult		1
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		2
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		2
Paraquat 10 mM 48 hrs, 4-day adult		2
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		2
cold shock, 4-day adult		3
heat shock, 4-day adult		1
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		2
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		2
Paraquat 10 mM 48 hrs, 4-day adult		2
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		2
cold shock, 4-day adult		3
heat shock, 4-day adult		1
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		2
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		2
Paraquat 10 mM 48 hrs, 4-day adult		2
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate

log, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		2
cold shock, 4-day adult		3
heat shock, 4-day adult		1
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		2
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		2
Paraquat 10 mM 48 hrs, 4-day adult		2
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		2
cold shock, 4-day adult		3
heat shock, 4-day adult		1
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		2
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		2
Paraquat 10 mM 48 hrs, 4-day adult		2
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		2
cold shock, 4-day adult		3
heat shock, 4-day adult		1
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		2
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		2
Paraquat 10 mM 48 hrs, 4-day adult		2
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Treatment		Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3

Expression Clusters

A cluster of genes with similar mRNA expression dynamics across development.

(The modENCODE Consortium, 2010, Graveley et al., 2011)

External Data & Images

Linkouts

BDGP expression data

•

GH22307

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0053202

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

•

CG33202-RB

Alleles & Phenotypes

Summary of Allele Phenotypes

Lethality

Allele

viable

viable, with Scer\GAL4^pnr-MD237

Sterility

Allele

fertile

Phenotype manifest in

Allele

Classical Alleles ( 10 )

For All Classical Alleles Show

Allele of dpr11	Mutagen	Stocks	Known lesion
dpr11^EY06824	P-element activity	1	--
dpr11^f03480	piggyBac transposase	1	--
dpr11^f06792	piggyBac transposase	1	--
dpr11^GT-000327		1	--
dpr11^MI01743		1	--
dpr11^MI02231		1	--
dpr11^MI03298		1	--
dpr11^MI07576		1	--
dpr11^PL00368	P-element activity	1	--
dpr11^PL00378	P-element activity	1	--

Alleles Carried on Transgenic Constructs ( 4 )

For All Alleles Carried on Transgenic Constructs Show

Allele of dpr11	Mutagen	Stocks	Known lesion
dpr11^GD13301	in vitro construct - RNAi in vitro construct - regulatory fusion	3	Yes
dpr11^GD2584	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
dpr11^KK104767	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
dpr11^GD14312	in vitro construct - RNAi in vitro construct - regulatory fusion	0	Yes

Aneuploid Aberrations

Duplicated in

Dp(3;3)Tpl^JE19

(Smoyer et al., 2003)

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

UAS construct

Insertions

Type of insertions

Name

Expression data

insertion of mobile activating element

P{EPgy2}dpr11^EY06824

miscellaneous insertions

P{GT1}dpr11^GT-000327

PBac{WH}dpr11^f03480

PBac{WH}dpr11^f06792

insertion of enhancer trap binary system

PBac{GAL4D,EYFP}dpr11^PL00368

PBac{GAL4D,EYFP}dpr11^PL00378

Gene Ontology: Function, Process & Cellular Component ( 1 unique term )

There is no information supporting a cellular component or molecular function term for this gene.

(Based on a review of available data before: 2006)

Terms Based on Experimental Evidence ( 0 terms )

Terms Based on Predictions or Assertions ( 1 term )

Molecular Function ( 0 terms)

Biological Process

CV term

Evidence

References

sensory perception of chemical stimulus

inferred from sequence or structural similarity with dpr

(Nakamura et al., 2002)

Cellular Component ( 0 terms)

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Interactions & Pathways

Summary of Physical Interactions

Summary of Genetic Interactions

Interacts with

Please look at the allele data for full details of the genetic interactions

dpr11 allele

Gene

References

External Data

Linkouts

DroID - A comprehensive database of gene and protein interactions.

•

FBgn0053202

Orthologs

OrthoDB Orthologs (30) - based on analysis using Dmel annotation version 5.41

OrthoDB Ortholog Groups

OrthoDB orthology group searches

(Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288)

Drosophila inclusive ortholog search

EOG67M2J6

Dipteran inclusive ortholog search

EOG669R3R

Insect inclusive ortholog search

EOG6KH1R4

Arthropod inclusive ortholog search

EOG6P5HS7

Metazoa inclusive ortholog search

EOG6ZD5ZJ

Orthologs in Drosophila Species (EOG67M2J6)

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila melanogaster

fruit fly

Drosophila sechellia

Drosophila sechellia

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA27362

Drosophila persimilis

Dper\GL22062

Drosophila willistoni

Dwil\GK11528

Drosophila virilis

Dvir\GJ11075

Drosophila mojavensis

Dmoj\GI10269

Drosophila grimshawi

Dgri\GH17309

Orthologs in non-Drosophila Dipterans (EOG669R3R)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL007794

Anopheles gambiae

Malaria mosquito

Agam\AGAP011128

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ002529

Orthologs in non-Dipteran Insects (EOG6KH1R4)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Apis mellifera

Western honey bee

Amel\GB41414

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG008188

Acromyrmex echinatior

Panamanian leafcutter ant

Aech\AECH15410

Atta cephalotes

Leafcutter ant

Acep\ACEP16788

Camponotus floridanus

Florida carpenter ant

Cflo\CFLO20628

Harpegnathos saltator

Jerdons jumping ant

Hsal\HSAL19641

Linepithema humile

Argentine ant

Lhum\LH24235

Pogonomyrmex barbatus

Red harvester ant

Pbar\PB20114

Solenopsis invicta

Red fire ant

Sinv\SINV16344

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI007143

Bombyx mori

Silkmoth

Bmor\BGIBMGA007216

Pediculus humanus

Human body louse

Phum\PHUM413630

Tribolium castaneum

Red flour beetle

Tcas\TC014172

Orthologs in non-Insect Arthropods (EOG6P5HS7)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Daphnia pulex

Water flea

Dpux\MEF2B

Daphnia pulex

Water flea

Dpux\JGI_V11_54448

Orthologs in non-Arthropod Metazoa (EOG6ZD5ZJ)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_006812gn

Human Orthologs (0)

Gene

OMIM

HGNC

AAA Orthologs (7) based on analysis using Dmel annotation version 4.3

Organism

Gene

Drosophila yakuba

Dyak\GE24097

Drosophila ananassae

Dana\GF16651

Drosophila pseudoobscura pseudoobscura

Dpse\GA27362

Drosophila persimilis

Dper\GL22062

Drosophila willistoni

Dwil\GK11528

Drosophila mojavensis

Dmoj\GI10269

Drosophila grimshawi

Dgri\GH17309

Stocks & Reagents

Stocks Listed in FlyBase ( 15 )

Bloomington

20982

w¹¹¹⁸; P{GT1}dpr11^GT-000327

40181

y¹ w^*; Mi{MIC}dpr11^MI02231

40738

y¹ w^*; Mi{MIC}dpr11^MI01743

41473

y¹ w^*; Mi{MIC}dpr11^MI03298

43735

y¹ w^*; Mi{MIC}dpr11^MI07576

v107548

v4797

w¹¹¹⁸; P{GD2584}v4797

v23243

w¹¹¹⁸; P{GD13301}v23243

v40329

w¹¹¹⁸; P{GD13301}v40329

v23242

w¹¹¹⁸; P{GD13301}v23242/TM3

More stocks available...

Genomic Clones ( 2 )

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones ( 22 )

Please Note

This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA Clones, Fully Sequenced

BDGP DGC clones

GH22307

Other clones

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi & Array Information

Linkouts

DRSC - Results from RNAi screens.

•

FBgn0053202

GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents

•

40800

Antibody Information

Other Information

Discoverer

Etymology

Identification

Relationship to Other Genes

Source for database identity of

Source for identity of: dpr11 CG33202

(Nakamura et al., 2002)

Source for database merge of

Source for merge of: CG15181 CG15182 CG15183

(FlyBase Genome Annotators, 2002-2003)

Source for merge of: CG33202 BcDNA:GH22307

(FlyBase, 1996-)

Additional comments

Annotations CG15181, CG15182 and CG15183 merged as CG33202 in release 3 of the genome annotation.

(FlyBase Genome Annotators, 2002-2003)

Source for merge of CG33202 BcDNA:GH22307 was a shared cDNA (date:030728).

(FlyBase, 1996-)

Other Comments

External Crossreferences & Linkouts

Sequence Crossreferences

RefSeq (Transcripts)

•

RefSeq (Proteins)

•

DDBJ / EMBL / GenBank

•

Entrez Gene - A searchable database of RefSeq genes.

•

40800

UniProtKB/TrEMBL

•

Q8MRE6

Other Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

Immunoglobulin subtype 2 (IPR003598)

Immunoglobulin subtype (IPR003599)

Immunoglobulin-like domain (IPR007110)

Immunoglobulin-like fold (IPR013783)

Immunoglobulin I-set (IPR013098)

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

•

GH22307

Linkouts

DroID - A comprehensive database of gene and protein interactions.

•

FBgn0053202

DRSC - Results from RNAi screens.

•

FBgn0053202

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0053202

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

•

CG33202-RB

FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans

•

FBgn0053202

GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents

•

40800

modMine - Data generated by the modENCODE project.

•

FBgn0053202

Synonyms & Secondary IDs ( 9 )

Reported As

Symbol Synonym

BcDNA:GH22307

CG15181

CG15182

CG15183

(Ringrose et al., 2003, Vogel et al., 2003, )

CG31309

(Vogel et al., 2003, )

CG33202

(Smoyer et al., 2003, Keleman et al., 2009.8.5, An et al., 2012)

CT35098

(Hynes and Zhao, 2000)

Dpr-11

(Vogel et al., 2003)

dpr11

Name Synonym

dpr11

Secondary FlyBase IDs

FBgn0037450
FBgn0037451
FBgn0037452
FBgn0051309
FBgn0063228

References ( 24 )

Generate a list of

All references relating to this gene ( 24 )

List References by type

Research paper ( 5 )
Supplementary material ( 5 )
Personal communication to FlyBase ( 10 )
FlyBase analysis ( 4 )

Recent research papers ( 1 )

An et al., 2012, PLoS ONE 7(3): e34510: Insect Neuropeptide Bursicon Homodimers Induce Innate Immune and Stress Genes during Molting by Activating the NF-κB Transcription Factor Relish. [FBrf0217909]

Show all research papers ...