FB2019_05, released Oct 15, 2019

Gene: Dmel\dpr11

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General Information
Symbol
Dmel\dpr11
Species
D. melanogaster
Name
defective proboscis extension response 11
Annotation Symbol
CG33202
Feature Type
protein_coding_gene
FlyBase ID
FBgn0053202
Gene Model Status
Current
Stock Availability
17 publicly available
Gene Snapshot
defective proboscis extension response 11 (dpr11) encodes a protein involved in axon guidance and regulation of neuromuscular junction development. [Date last reviewed: 2019-08-01]
Other Summaries
Key Links
Genomic Location
Cytogenetic map
83F1-83F4
Sequence location
3R:6,529,169..6,593,330 [-]
Recombination map
3-47.5
Sequence
Get Decorated FASTA
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
NCBI
UCSC
Ensembl
PopFly
Function
GO Summary Ribbons
Gene Group (FlyBase)
Protein Family (UniProt)
-
Protein Signatures (InterPro)
Molecular Function (GO)
[Detailed GO annotations]
Experimental Evidence
-
Predictions / Assertions
-
Summaries
Gene Group (FlyBase)
DEFECTIVE PROBOSCIS EXTENSION RESPONSE -
Defective proboscis extension response (Dpr) cell surface proteins are members of the immunoglobulin superfamily. They form a complex interaction network with Dpr-interacting proteins (DIPs), acting as neuronal surface labels in the specificity of synaptic connections between neurons and target cells. (Adapted from FBrf0230454 and FBrf0149073).
Gene Model and Products
Number of Transcripts
2
Number of Unique Polypeptides
1

Please see the GBrowse view of Dmel\dpr11 or the JBrowse view of Dmel\dpr11 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Comments on Gene Model
Gene model reviewed during 5.47
Sequence Ontology: Class of Gene
nuclear_gene
protein_coding_gene
Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
dpr11-RB
FBtr0081704
NM_176409
3519
360
dpr11-RC
FBtr0336453
NM_001275391
4651
360
Additional Transcript Data and Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank
dpr11-PB
FBpp0081202
38.1
360
8.69
NP_788586
AAF54116
dpr11-PC
FBpp0307559
38.1
360
8.69
NP_001262320
AGB95703
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

360 aa isoforms: dpr11-PB, dpr11-PC
Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\dpr11 using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Gene Ontology (7 terms)
Molecular Function (0 terms)
There is no information supporting a Molecular Function term for this gene. (Based on a review of available data before: 2006-08-03 )
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (0 terms)
Biological Process (5 terms)
Terms Based on Experimental Evidence (4 terms)
CV Term
Evidence
References
establishment of synaptic specificity at neuromuscular junction
inferred from direct assay
(Carrillo et al., 2015)
photoreceptor cell axon guidance
inferred from mutant phenotype
(Carrillo et al., 2015)
regulation of neuromuscular junction development
inferred from mutant phenotype
(Carrillo et al., 2015)
synapse organization
inferred from expression pattern
(Carrillo et al., 2015)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
sensory perception of chemical stimulus
inferred from sequence or structural similarity with FLYBASE:dpr1; FB:FBgn0040726
(Nakamura et al., 2002)
synapse organization
inferred from biological aspect of ancestor with PANTHER:PTN000589413
(assigned by GO_Central )
(Gaudet et al., 2011)
Cellular Component (2 terms)
Terms Based on Experimental Evidence (1 term)
CV Term
Evidence
References
neuron projection membrane
inferred from direct assay
(Carrillo et al., 2015)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
integral component of plasma membrane
inferred from sequence model
(Ozkan et al., 2013)
neuron projection membrane
inferred from biological aspect of ancestor with PANTHER:PTN000589413
(assigned by GO_Central )
(Gaudet et al., 2011)
Expression Data
Expression Summary Ribbons
Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.
For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.
Transcript Expression
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Evidence
References
neuron projection membrane
inferred from direct assay
(Carrillo et al., 2015)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\dpr11 in GBrowse 2
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Bulk Downloads
RNA-Seq RPKM values for all genes
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyBase Wiki
Image Based Resources
Alleles, Insertions, and Transgenic Constructs
Classical and Insertion Alleles ( 13 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 6 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of dpr11
Transgenic constructs containing regulatory region of dpr11
Deletions and Duplications ( 1 )
Phenotypes
Orthologs
Downloads
Download All DIOPT Orthologs
Download All OrthoDB Orthologs
Human Orthologs (via DIOPT v7.1)
Homo sapiens (Human) (9)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Hsap\IGSF9B
1 of 15
No
Yes
Hsap\KIRREL1
1 of 15
Yes
No
Hsap\KIRREL2
1 of 15
Yes
No
Hsap\KIRREL3
1 of 15
Yes
No
Hsap\LRIT1
1 of 15
No
Yes
Hsap\LRIT3
1 of 15
Yes
No
Hsap\PAPLN
1 of 15
Yes
No
Hsap\SDK1
1 of 15
Yes
No
Hsap\USH2A
1 of 15
Yes
Yes
Model Organism Orthologs (via DIOPT v7.1)
Mus musculus (laboratory mouse) (10)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Mmus\Igsf9b
1 of 15
Yes
No
Mmus\Jaml
1 of 15
Yes
No
Mmus\Kirrel2
1 of 15
Yes
No
 
Mmus\Kirrel3
1 of 15
Yes
No
 
Mmus\Kirrel
1 of 15
Yes
No
 
Mmus\Lrit1
1 of 15
Yes
No
Mmus\Lrit3
1 of 15
Yes
No
Mmus\Papln
1 of 15
Yes
No
Mmus\Ptprq
1 of 15
Yes
Yes
Mmus\Sdk1
1 of 15
Yes
No
Rattus norvegicus (Norway rat) (10)
Rnor\Hmcn1
1 of 13
Yes
Yes
Rnor\Igsf9b
1 of 13
Yes
No
Rnor\Jaml
1 of 13
Yes
No
Rnor\Kirrel1
1 of 13
Yes
No
Rnor\Kirrel2
1 of 13
Yes
No
Rnor\Kirrel3
1 of 13
Yes
No
Rnor\Lrit1
1 of 13
Yes
No
Rnor\Obscn
1 of 13
Yes
No
Rnor\Opcml
1 of 13
Yes
No
Rnor\Tyro3
1 of 13
Yes
Yes
Xenopus tropicalis (Western clawed frog) (7)
Xtro\cadm2
1 of 12
Yes
Yes
Xtro\igsf9b
1 of 12
Yes
No
Xtro\kirrel2
1 of 12
Yes
No
Xtro\lrit3
1 of 12
Yes
Yes
Xtro\nfasc
1 of 12
Yes
No
Xtro\obsl1
1 of 12
Yes
Yes
Xtro\papln
1 of 12
Yes
No
Danio rerio (Zebrafish) (27)
Drer\dicp1.1
1 of 15
Yes
Yes
Drer\dscama
1 of 15
Yes
No
Drer\dscamb
1 of 15
Yes
No
Drer\havcr2
1 of 15
Yes
Yes
Drer\igsf9a
1 of 15
Yes
No
Drer\igsf9bb
1 of 15
Yes
No
Drer\itgb4
1 of 15
Yes
No
Drer\kirrel1a
1 of 15
Yes
No
Drer\kirrel1b
1 of 15
Yes
No
Drer\kirrel3a
1 of 15
Yes
No
Drer\kirrel3b
1 of 15
Yes
No
Drer\kirrel3l
1 of 15
Yes
No
Drer\LOC101885444
1 of 15
Yes
Yes
Drer\LOC101885725
1 of 15
Yes
Yes
Drer\lrit1a
1 of 15
Yes
No
Drer\lrit1b
1 of 15
Yes
No
Drer\lrit3a
1 of 15
Yes
No
Drer\lrit3b
1 of 15
Yes
No
Drer\ncam1b
1 of 15
Yes
No
Drer\paplna
1 of 15
Yes
No
Drer\sdk1a
1 of 15
Yes
No
Drer\sdk1b
1 of 15
Yes
No
Drer\si:ch211-163c2.2
1 of 15
Yes
Yes
Drer\si:ch211-264f5.6
1 of 15
Yes
Yes
Drer\si:ch1073-459j12.1
1 of 15
Yes
No
Drer\si:dkey-65b12.12
1 of 15
Yes
Yes
Drer\ush2a
1 of 15
Yes
Yes
Caenorhabditis elegans (Nematode, roundworm) (4)
Cele\zig-8
6 of 15
Yes
No
Cele\C53A5.13
1 of 15
No
Yes
Cele\rig-3
1 of 15
No
Yes
Cele\zig-10
1 of 15
No
Yes
Arabidopsis thaliana (thale-cress) (0)
No records found.
Saccharomyces cerevisiae (Brewer's yeast) (0)
No records found.
Schizosaccharomyces pombe (Fission yeast) (0)
No records found.
Orthologs in Drosophila Species (via OrthoDB v9.1) ( EOG09190E7K )
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly
Dmel\dpr11
Drosophila simulans
Dsim\GD19543
Drosophila sechellia
Dsec\GM10550
Drosophila sechellia
Dsec\GM10551
Drosophila erecta
Dere\GG10424
Drosophila yakuba
Dyak\GE24097
Drosophila ananassae
Dana\GF16651
Drosophila pseudoobscura pseudoobscura
Dpse\GA27362
Drosophila persimilis
Dper\GL22062
Drosophila willistoni
Dwil\GK11528
Drosophila virilis
Dvir\GJ11075
Drosophila mojavensis
Dmoj\GI10269
Drosophila grimshawi
Dgri\GH17309
Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG0915082K )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Musca domestica
House fly
Mdoa\17021957
Musca domestica
House fly
Mdoa\17024115
Glossina morsitans
Tsetse fly
Gmor\GMOY006248
Glossina morsitans
Tsetse fly
Gmor\GMOY003838
Lucilia cuprina
Australian sheep blowfly
Lcup\FF38_08502
Lucilia cuprina
Australian sheep blowfly
Lcup\FF38_02868
Mayetiola destructor
Hessian fly
Mdes\Mdes015656
Mayetiola destructor
Hessian fly
Mdes\Mdes008889
Mayetiola destructor
Hessian fly
Mdes\Mdes008884
Aedes aegypti
Yellow fever mosquito
Aaeg\AAEL007794
Anopheles darlingi
American malaria mosquito
Adar\ADAC009459
Anopheles gambiae
Malaria mosquito
Agam\AGAP011128
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ002529
Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W0PR4 )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Bombyx mori
Silkmoth
Bmor\BGIBMGA012382
Bombyx mori
Silkmoth
Bmor\BGIBMGA003965
Bombyx mori
Silkmoth
Bmor\BGIBMGA007216
Bombyx mori
Silkmoth
Bmor\BGIBMGA013888
Bombyx mori
Silkmoth
Bmor\BGIBMGA010535
Bombyx mori
Silkmoth
Bmor\BGIBMGA000193
Bombyx mori
Silkmoth
Bmor\BGIBMGA014206
Bombyx mori
Silkmoth
Bmor\BGIBMGA001545
Bombyx mori
Silkmoth
Bmor\BGIBMGA001286
Bombyx mori
Silkmoth
Bmor\BGIBMGA013755
Danaus plexippus
Monarch butterfly
Dple\DPOGS208163-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS205598-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS203110-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS209896-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS206247-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS211358-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS209302-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS206250-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS214345-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS202517-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS206579-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS215421-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS210612-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS202050-PA
Heliconius melpomene
Postman butterfly
Hmel\HMEL017455
Heliconius melpomene
Postman butterfly
Hmel\HMEL005895
Heliconius melpomene
Postman butterfly
Hmel\HMEL004236
Heliconius melpomene
Postman butterfly
Hmel\HMEL015385
Heliconius melpomene
Postman butterfly
Hmel\HMEL011101
Heliconius melpomene
Postman butterfly
Hmel\HMEL003046
Heliconius melpomene
Postman butterfly
Hmel\HMEL018058
Heliconius melpomene
Postman butterfly
Hmel\HMEL005985
Heliconius melpomene
Postman butterfly
Hmel\HMEL004804
Heliconius melpomene
Postman butterfly
Hmel\HMEL017922
Heliconius melpomene
Postman butterfly
Hmel\HMEL013417
Heliconius melpomene
Postman butterfly
Hmel\HMEL015365
Apis florea
Little honeybee
Aflo\2417180518
Apis florea
Little honeybee
Aflo\3131127988
Apis florea
Little honeybee
Aflo\4250949204
Apis florea
Little honeybee
Aflo\3079719972
Apis florea
Little honeybee
Aflo\2702348164
Apis florea
Little honeybee
Aflo\2396217188
Apis florea
Little honeybee
Aflo\2163659954
Apis florea
Little honeybee
Aflo\3438323492
Apis florea
Little honeybee
Aflo\2459072772
Apis florea
Little honeybee
Aflo\4806685908
Apis florea
Little honeybee
Aflo\2147492609
Apis florea
Little honeybee
Aflo\4084224804
Apis florea
Little honeybee
Aflo\2359502756
Apis florea
Little honeybee
Aflo\2147489233
Apis florea
Little honeybee
Aflo\2147491617
Apis mellifera
Western honey bee
Amel\GB47707
Apis mellifera
Western honey bee
Amel\GB53574
Apis mellifera
Western honey bee
Amel\GB51181
Apis mellifera
Western honey bee
Amel\GB40061
Apis mellifera
Western honey bee
Amel\GB41414
Apis mellifera
Western honey bee
Amel\GB54299
Apis mellifera
Western honey bee
Amel\GB51183
Apis mellifera
Western honey bee
Amel\GB44739
Apis mellifera
Western honey bee
Amel\GB42260
Apis mellifera
Western honey bee
Amel\GB53294
Apis mellifera
Western honey bee
Amel\GB55000
Apis mellifera
Western honey bee
Amel\GB42584
Apis mellifera
Western honey bee
Amel\LOC724734
Apis mellifera
Western honey bee
Amel\GB40069
Apis mellifera
Western honey bee
Amel\GB42576
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP21795
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP22921
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP15340
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP22624
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP17123
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP21544
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP15404
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP17530
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP15359
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP20882
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP12821
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP14517
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP20466
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP21537
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP23709
Bombus terrestris
Buff-tailed bumblebee
Bter\15211856
Bombus terrestris
Buff-tailed bumblebee
Bter\15205136
Bombus terrestris
Buff-tailed bumblebee
Bter\15205403
Bombus terrestris
Buff-tailed bumblebee
Bter\15203435
Bombus terrestris
Buff-tailed bumblebee
Bter\15206820
Bombus terrestris
Buff-tailed bumblebee
Bter\15206745
Bombus terrestris
Buff-tailed bumblebee
Bter\15206693
Bombus terrestris
Buff-tailed bumblebee
Bter\15208510
Bombus terrestris
Buff-tailed bumblebee
Bter\15214139
Bombus terrestris
Buff-tailed bumblebee
Bter\15208036
Bombus terrestris
Buff-tailed bumblebee
Bter\15205025
Bombus terrestris
Buff-tailed bumblebee
Bter\15211859
Bombus terrestris
Buff-tailed bumblebee
Bter\15207219
Bombus terrestris
Buff-tailed bumblebee
Bter\15206846
Linepithema humile
Argentine ant
Lhum\LH20666
Linepithema humile
Argentine ant
Lhum\LH24144
Linepithema humile
Argentine ant
Lhum\LH15450
Linepithema humile
Argentine ant
Lhum\LH21711
Linepithema humile
Argentine ant
Lhum\LH11455
Linepithema humile
Argentine ant
Lhum\LH15813
Linepithema humile
Argentine ant
Lhum\LH24235
Linepithema humile
Argentine ant
Lhum\LH13914
Linepithema humile
Argentine ant
Lhum\LH13903
Linepithema humile
Argentine ant
Lhum\LH17266
Linepithema humile
Argentine ant
Lhum\LH11448
Linepithema humile
Argentine ant
Lhum\LH19816
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:0017e5
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:0015e4
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:000c21
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:000441
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:002375
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:001379
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:000cea
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:001a70
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:0017da
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:002e27
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:000451
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:000450
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:001328
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG014312
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG026492
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG008252
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG016852
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG012731
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG008188
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG031947
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG014303
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG010416
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG012803
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG009357
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG026490
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_00197
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_08735
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_10981
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_09070
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_11783
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_02239
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_11782
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_08745
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_03172
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_05970
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_11781
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_10980
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_08740
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_09092
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_02236
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_05826
Tribolium castaneum
Red flour beetle
Tcas\TC014172
Tribolium castaneum
Red flour beetle
Tcas\TC032133
Tribolium castaneum
Red flour beetle
Tcas\TC010127
Tribolium castaneum
Red flour beetle
Tcas\TC013655
Tribolium castaneum
Red flour beetle
Tcas\TC010603
Tribolium castaneum
Red flour beetle
Tcas\TC033556
Tribolium castaneum
Red flour beetle
Tcas\TC008933
Tribolium castaneum
Red flour beetle
Tcas\TC009101
Tribolium castaneum
Red flour beetle
Tcas\TC004621
Tribolium castaneum
Red flour beetle
Tcas\TC033698
Tribolium castaneum
Red flour beetle
Tcas\TC010130
Tribolium castaneum
Red flour beetle
Tcas\TC034457
Tribolium castaneum
Red flour beetle
Tcas\TC030995
Pediculus humanus
Human body louse
Phum\PHUM383040
Pediculus humanus
Human body louse
Phum\PHUM065930
Pediculus humanus
Human body louse
Phum\PHUM595090
Pediculus humanus
Human body louse
Phum\PHUM413630
Pediculus humanus
Human body louse
Phum\PHUM371260
Pediculus humanus
Human body louse
Phum\PHUM307810
Pediculus humanus
Human body louse
Phum\PHUM382820
Pediculus humanus
Human body louse
Phum\PHUM048790
Pediculus humanus
Human body louse
Phum\PHUM417160
Pediculus humanus
Human body louse
Phum\PHUM383760
Pediculus humanus
Human body louse
Phum\PHUM170650
Pediculus humanus
Human body louse
Phum\PHUM121360
Pediculus humanus
Human body louse
Phum\PHUM385160
Pediculus humanus
Human body louse
Phum\PHUM046150
Rhodnius prolixus
Kissing bug
Rpro\RPRC003049
Rhodnius prolixus
Kissing bug
Rpro\RPRC003034
Rhodnius prolixus
Kissing bug
Rpro\RPRC011156
Rhodnius prolixus
Kissing bug
Rpro\RPRC001258
Rhodnius prolixus
Kissing bug
Rpro\RPRC007179
Rhodnius prolixus
Kissing bug
Rpro\RPRC001654
Rhodnius prolixus
Kissing bug
Rpro\RPRC002071
Rhodnius prolixus
Kissing bug
Rpro\RPRC002652
Rhodnius prolixus
Kissing bug
Rpro\RPRC005435
Cimex lectularius
Bed bug
Clec\CLEC000635
Cimex lectularius
Bed bug
Clec\CLEC008185
Cimex lectularius
Bed bug
Clec\CLEC012784
Cimex lectularius
Bed bug
Clec\CLEC013183
Cimex lectularius
Bed bug
Clec\CLEC008244
Cimex lectularius
Bed bug
Clec\CLEC002918
Cimex lectularius
Bed bug
Clec\CLEC000637
Cimex lectularius
Bed bug
Clec\CLEC007277
Cimex lectularius
Bed bug
Clec\CLEC006324
Cimex lectularius
Bed bug
Clec\CLEC012689
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI37669
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI001500
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI005117
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI085714
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI000744
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI007143
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI006858
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI000101
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI005884
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI003058
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI064251
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_18076
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_09296
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_17958
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_17530
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_00600
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_15530
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_17473
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_01763
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_18036
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_18613
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_18483
Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X0FMW )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strigamia maritima
European centipede
Smar\SMAR009512
Strigamia maritima
European centipede
Smar\SMAR014426
Strigamia maritima
European centipede
Smar\SMAR012075
Strigamia maritima
European centipede
Smar\SMAR012076
Strigamia maritima
European centipede
Smar\SMAR005541
Strigamia maritima
European centipede
Smar\SMAR014109
Strigamia maritima
European centipede
Smar\SMAR013494
Ixodes scapularis
Black-legged tick
Isca\ISCW023418
Ixodes scapularis
Black-legged tick
Isca\ISCW021113
Ixodes scapularis
Black-legged tick
Isca\ISCW012168
Ixodes scapularis
Black-legged tick
Isca\ISCW014701
Ixodes scapularis
Black-legged tick
Isca\ISCW008568
Ixodes scapularis
Black-legged tick
Isca\ISCW019915
Ixodes scapularis
Black-legged tick
Isca\ISCW023662
Ixodes scapularis
Black-legged tick
Isca\ISCW013590
Ixodes scapularis
Black-legged tick
Isca\ISCW012169
Ixodes scapularis
Black-legged tick
Isca\ISCW012308
Ixodes scapularis
Black-legged tick
Isca\ISCW013453
Ixodes scapularis
Black-legged tick
Isca\ISCW016670
Ixodes scapularis
Black-legged tick
Isca\ISCW019922
Ixodes scapularis
Black-legged tick
Isca\ISCW019928
Stegodyphus mimosarum
African social velvet spider
Smim\KFM63060.1
Stegodyphus mimosarum
African social velvet spider
Smim\KFM72123.1
Stegodyphus mimosarum
African social velvet spider
Smim\KFM81311.1
Stegodyphus mimosarum
African social velvet spider
Smim\KFM60060.1
Stegodyphus mimosarum
African social velvet spider
Smim\KFM78383.1
Tetranychus urticae
Two-spotted spider mite
Turt\tetur22g01460
Tetranychus urticae
Two-spotted spider mite
Turt\tetur07g03340
Tetranychus urticae
Two-spotted spider mite
Turt\tetur22g01450
Tetranychus urticae
Two-spotted spider mite
Turt\tetur22g01490
Tetranychus urticae
Two-spotted spider mite
Turt\tetur08g01110
Tetranychus urticae
Two-spotted spider mite
Turt\tetur01g00020
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_316516
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_14273
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_65065
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_70078
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_28601
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_4207
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_40950
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_56750
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_4664
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_312160
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_300025
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_54448
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_192128
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_48341
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_57343
Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0QR8 )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Kirrel2L_5
Strongylocentrotus purpuratus
Purple sea urchin
Spur\SPU_022824gn
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Kirrel2L
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Igsf10L
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Kirrel2L_2
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Srcrr1
Ciona intestinalis
Vase tunicate
Cint\ENSCING00000020423
Ciona intestinalis
Vase tunicate
Cint\ENSCING00000024031
Paralogs
Downloads
Download All DIOPT Paralogs
Paralogs (via DIOPT v7.1)
Drosophila melanogaster (Fruit fly) (34)
Gene Symbol
Score
Source
Compara
eggNOG
Homologene
Inparanoid
Isobase
OrthoDB
OrthoFinder
orthoMCL
Panther
RoundUp
Alignment
dpr2
6 of 10
dpr5
6 of 10
dpr10
6 of 10
dpr19
6 of 10
dpr21
6 of 10
dpr1
5 of 10
dpr3
5 of 10
dpr4
5 of 10
dpr6
5 of 10
dpr7
5 of 10
dpr12
5 of 10
dpr13
5 of 10
dpr14
5 of 10
dpr8
4 of 10
dpr15
4 of 10
dpr16
4 of 10
dpr18
4 of 10
dpr9
3 of 10
dpr17
3 of 10
dpr20
3 of 10
Ama
1 of 10
babos
1 of 10
CG13506
1 of 10
DIP-δ
1 of 10
DIP-ε
1 of 10
DIP-η
1 of 10
DIP-ι
1 of 10
DIP-θ
1 of 10
DIP-ζ
1 of 10
Dscam2
1 of 10
kirre
1 of 10
rst
1 of 10
Strn-Mlck
1 of 10
tutl
1 of 10
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Model Summary Ribbon
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 0 )
    Human Ortholog
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Interaction
    References
    Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
     
    Disease Associations of Human Orthologs (via DIOPT v7.1 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    Functional Complementation Data
    Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
    Interactions
    Summary of Physical Interactions
    Summary of Genetic Interactions
    esyN Network Diagram
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    External Data
    Linkouts
    DroID - A comprehensive database of gene and protein interactions.
    MIST (protein-protein) - An integrated Molecular Interaction Database
    Pathways
    Gene Group - Pathway Membership (FlyBase)
    External Data
    Linkouts
    Genomic Location and Detailed Mapping Data
    Chromosome (arm)
    3R
    Recombination map
    3-47.5
    Cytogenetic map
    83F1-83F4
    Sequence location
    3R:6,529,169..6,593,330 [-]
    FlyBase Computed Cytological Location
    Cytogenetic map
    Evidence for location
    83F1-83F4
    Limits computationally determined from genome sequence between P{lacW}casj1C2 and P{PZ}lab01241
    Experimentally Determined Cytological Location
    Cytogenetic map
    Notes
    References
    Experimentally Determined Recombination Data
    Location
    3-47.5
    (FlyBase, 2016)
    3-44.2
    (Comeron et al., 2012)
    Left of (cM)
    Right of (cM)
    Notes
    Stocks and Reagents
    Stocks (17)
    Genomic Clones (54)
    cDNA Clones (18)
     

    Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

    cDNA clones, fully sequences
    BDGP DGC clones
    Other clones
      Drosophila Genomics Resource Center cDNA clones

      For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

      cDNA Clones, End Sequenced (ESTs)
      BDGP DGC clones
      Other clones
      RNAi and Array Information
      Linkouts
      DRSC - Results frm RNAi screens
      GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
      Antibody Information
      Laboratory Generated Antibodies
       
      Commercially Available Antibodies
       
      Other Information
      Relationship to Other Genes
      Source for database identify of
      Source for identity of: dpr11 CG33202
      (Nakamura et al., 2002)
      Source for database merge of
      Source for merge of: CG33202 BcDNA:GH22307
      (FlyBase, 1996-)
      Source for merge of: CG15181 CG15182 CG15183
      (FlyBase Genome Annotators, 2002-2003)
      Additional comments
      Annotations CG15181, CG15182 and CG15183 merged as CG33202 in release 3 of the genome annotation.
      (FlyBase Genome Annotators, 2002-2003)
      Source for merge of CG33202 BcDNA:GH22307 was a shared cDNA ( date:030728 ).
      (FlyBase, 1996-)
      Other Comments
      Origin and Etymology
      Discoverer
      Etymology
      Identification
      External Crossreferences and Linkouts ( 43 )
      Sequence Crossreferences
      NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
      GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
      GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
      Other crossreferences
      BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
      Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
      Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Flygut - An atlas of the Drosophila adult midgut
      GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
      iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
      InterPro - A database of protein families, domains and functional sites
      KEGG Genes - Molecular building blocks of life in the genomic space.
      modMine - A data warehouse for the modENCODE project
      Linkouts
      DroID - A comprehensive database of gene and protein interactions.
      DRSC - Results frm RNAi screens
      FLIGHT - Cell culture data for RNAi and other high-throughput technologies
      FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
      FlyMine - An integrated database for Drosophila genomics
      MIST (protein-protein) - An integrated Molecular Interaction Database
      Synonyms and Secondary IDs (11)
      Datasets (0)
      Study focus (0)
      Experimental Role
      Project
      Project Type
      Title
      References (50)