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Gene Dmel\CG33470

General Information
Symbol	Dmel\CG33470	Species	D. melanogaster
Name		Annotation symbol	CG33470
Feature type	protein_coding_gene	FlyBase ID	FBgn0053470
Gene Model Status	Current	Stock availability	2 publicly available
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	50A5-50A5	Sequence location	2R:9,299,244..9,300,590 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG33470 (FBgn0053470). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during early pupal stages, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: No FlyAtlas data available because no Affy2 ProbeSet aligns to an exon of CG33470. Comments on Affy2 ProbeSet: No relevant information because no Affy2 ProbeSet aligns to an exon of CG33470. Gene sequence location is 2R:9299244..9300590.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03	Controlled Vocabulary Terms cellular_component molecular_function biological_process
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 50A5-50A5   Limits computationally determined from genome sequence between P{EP}DpEP358 and P{lacW}drkk13809&P{EP}mip120EP606 50A5
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG33470 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.49 Apparent introns not annotated: probable artifact due to repetitive sequence.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG33470-RA FBtr0087656  NM_206108   1159   257 CG33470-RC FBtr0303099  NM_206107   904   257
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG33470-PA   FBpp0086782   28.0   257   11.28     NP_995830   AAS64856 CG33470-PC   FBpp0292218   28.0   257   11.28     NP_995829   AAS64857
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE013599 AAS64856   AE013599 AAS64857   AI062248   AI106825   AI106967   AI107086   AI107182   AI107206   AI107440   AI107670   AI108777   AI109793   AI109794   AI109896   AI114116   AI114245   AI134030   AI134688   AI135702   AI238786   AI239064   AI257700   AI257998   AI292652   AI387068   AI402794   AI404372   AI406105   BG639267   BI167479   BI214790   BI356364   BI357416   BI365020   BI367803   BI370992   BI374761   BI483632   BI563711   BI566958   BI567846   BI573194   BI573195   BI574416   BI576101   BI581317   BI581476   BI583010   BI583560   BI583808   BI584878   BI586685   BI593454   BI604272   BI604838   BI608302   BI608826   BI611202   BI611363   BI612512   BI613830   BI615251   BI615715   BI616375   BI616739   BI616878   BI618785   BI619444   BI619978   BI621639   BI622046   BI622855   BI624594   BI625471   BI627965   BI628483   BI629304   BT003754   BT011489   CA807142   CK134898   CK661435   CO179899   CO180082   CO281821   CO283034   CO286942   CO296559   CO316348   CX309441   CX309442   EC085250   EC196078   EC234263   EL872296   EL872418   EL873424   EL873425   EL874525   EV580269   EV580970   EV582284   EV582637   EV586570   GH941889   GH950978   GH953581   GH956047   GH967410   GH983057   GH984054
UniProtKB/Swiss-Prot	Q8ML70
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 13 -- 16   embryonic head epidermis   (Fisher et al., 2012) embryonic/larval fat body   (Fisher et al., 2012) gonad   (Fisher et al., 2012) ventral imaginal precursor   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    46 head, virgin 4-day female    39 head, virgin 20-day female    381 head, mated 1-day female    27 head, mated 4-day female    37 head, mated 20-day female    157 head, mated 1-day male    50 head, mated 4-day male    82 head, mated 20-day male    210 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    16 digestive system, 4-day adult    7 digestive system, 20-day adult    18 fat body, larvae L3 wandering    9 fat body, white prepupae    11 fat body, pupae P8    2 carcass, larvae L3 wandering    2 carcass, 1-day adult    119 carcass, 4-day adult    84 carcass, 20-day adult    341 ovary, virgin 4-day female    1 ovary, mated 4-day female    0 testis, mated 4-day male    2 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female  (46) head, virgin 4-day female  (39) head, virgin 20-day female  (381) head, mated 1-day female  (27) head, mated 4-day female  (37) head, mated 20-day female  (157) head, mated 1-day male  (50) head, mated 4-day male  (82) head, mated 20-day male  (210) salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    16 digestive system, 4-day adult    7 digestive system, 20-day adult    18 fat body, larvae L3 wandering    9 fat body, white prepupae    11 fat body, pupae P8    2 carcass, larvae L3 wandering    2 carcass, 1-day adult  (119) carcass, 4-day adult  (84) carcass, 20-day adult  (341) ovary, virgin 4-day female    1 ovary, mated 4-day female    0 testis, mated 4-day male    2 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    46 head, virgin 4-day female    39 head, virgin 20-day female  (381) head, mated 1-day female    27 head, mated 4-day female    37 head, mated 20-day female  (157) head, mated 1-day male    50 head, mated 4-day male    82 head, mated 20-day male  (210) salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    16 digestive system, 4-day adult    7 digestive system, 20-day adult    18 fat body, larvae L3 wandering    9 fat body, white prepupae    11 fat body, pupae P8    2 carcass, larvae L3 wandering    2 carcass, 1-day adult  (119) carcass, 4-day adult    84 carcass, 20-day adult  (341) ovary, virgin 4-day female    1 ovary, mated 4-day female    0 testis, mated 4-day male    2 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    46 head, virgin 4-day female    39 head, virgin 20-day female    381 head, mated 1-day female    27 head, mated 4-day female    37 head, mated 20-day female    157 head, mated 1-day male    50 head, mated 4-day male    82 head, mated 20-day male    210 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    16 digestive system, 4-day adult    7 digestive system, 20-day adult    18 fat body, larvae L3 wandering    9 fat body, white prepupae    11 fat body, pupae P8    2 carcass, larvae L3 wandering    2 carcass, 1-day adult    119 carcass, 4-day adult    84 carcass, 20-day adult    341 ovary, virgin 4-day female    1 ovary, mated 4-day female    0 testis, mated 4-day male    2 accessory gland, mated 4-day male    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    46 head, virgin 4-day female    39 head, virgin 20-day female    381 head, mated 1-day female    27 head, mated 4-day female    37 head, mated 20-day female    157 head, mated 1-day male    50 head, mated 4-day male    82 head, mated 20-day male    210 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    16 digestive system, 4-day adult    7 digestive system, 20-day adult    18 fat body, larvae L3 wandering    9 fat body, white prepupae    11 fat body, pupae P8    2 carcass, larvae L3 wandering    2 carcass, 1-day adult    119 carcass, 4-day adult    84 carcass, 20-day adult    341 ovary, virgin 4-day female    1 ovary, mated 4-day female    0 testis, mated 4-day male    2 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female  (46) head, virgin 4-day female  (39) head, virgin 20-day female  (381) head, mated 1-day female  27 head, mated 4-day female  (37) head, mated 20-day female  (157) head, mated 1-day male  (50) head, mated 4-day male  (82) head, mated 20-day male  (210) salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    16 digestive system, 4-day adult    7 digestive system, 20-day adult    18 fat body, larvae L3 wandering    9 fat body, white prepupae    11 fat body, pupae P8    2 carcass, larvae L3 wandering    2 carcass, 1-day adult  (119) carcass, 4-day adult  (84) carcass, 20-day adult  (341) ovary, virgin 4-day female    1 ovary, mated 4-day female    0 testis, mated 4-day male    2 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    46 head, virgin 4-day female    39 head, virgin 20-day female  (381) head, mated 1-day female    27 head, mated 4-day female    37 head, mated 20-day female  (157) head, mated 1-day male    50 head, mated 4-day male    82 head, mated 20-day male  (210) salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    16 digestive system, 4-day adult    7 digestive system, 20-day adult    18 fat body, larvae L3 wandering    9 fat body, white prepupae    11 fat body, pupae P8    2 carcass, larvae L3 wandering    2 carcass, 1-day adult  119 carcass, 4-day adult    84 carcass, 20-day adult  (341) ovary, virgin 4-day female    1 ovary, mated 4-day female    0 testis, mated 4-day male    2 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    46 head, virgin 4-day female    39 head, virgin 20-day female    381 head, mated 1-day female    27 head, mated 4-day female    37 head, mated 20-day female    157 head, mated 1-day male    50 head, mated 4-day male    82 head, mated 20-day male    210 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    16 digestive system, 4-day adult    7 digestive system, 20-day adult    18 fat body, larvae L3 wandering    9 fat body, white prepupae    11 fat body, pupae P8    2 carcass, larvae L3 wandering    2 carcass, 1-day adult    119 carcass, 4-day adult    84 carcass, 20-day adult    341 ovary, virgin 4-day female    1 ovary, mated 4-day female    0 testis, mated 4-day male    2 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during early pupal stages, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    2 embryo 16-18hr    1 embryo 18-20hr    15 embryo 20-22hr    54 embryo 22-24hr    41 larva L1    10 larva L2    1 larva L3 12hr old    9 larva L3 puffstage 1-2    23 larva L3 puffstage 3-6    24 larva L3 puffstage 7-9    18 white prepupae new    16 white prepupae 12hr    82 white prepupae 24hr    38 pupae 2d postWPP    24 pupae 3d postWPP    7 pupae 4d postWPP    20 adult male 01day    51 adult male 05day    77 adult male 30day    59 adult female 01day    34 adult female 05day    22 adult female 30day    115 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    2 embryo 16-18hr    1 embryo 18-20hr    15 embryo 20-22hr  (54) embryo 22-24hr  (41) larva L1    10 larva L2    1 larva L3 12hr old    9 larva L3 puffstage 1-2    23 larva L3 puffstage 3-6    24 larva L3 puffstage 7-9    18 white prepupae new    16 white prepupae 12hr  (82) white prepupae 24hr  (38) pupae 2d postWPP    24 pupae 3d postWPP    7 pupae 4d postWPP    20 adult male 01day  (51) adult male 05day  (77) adult male 30day  (59) adult female 01day  (34) adult female 05day    22 adult female 30day  (115) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    2 embryo 16-18hr    1 embryo 18-20hr    15 embryo 20-22hr    54 embryo 22-24hr    41 larva L1    10 larva L2    1 larva L3 12hr old    9 larva L3 puffstage 1-2    23 larva L3 puffstage 3-6    24 larva L3 puffstage 7-9    18 white prepupae new    16 white prepupae 12hr    82 white prepupae 24hr    38 pupae 2d postWPP    24 pupae 3d postWPP    7 pupae 4d postWPP    20 adult male 01day    51 adult male 05day    77 adult male 30day    59 adult female 01day    34 adult female 05day    22 adult female 30day  (115) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    2 embryo 16-18hr    1 embryo 18-20hr    15 embryo 20-22hr    54 embryo 22-24hr    41 larva L1    10 larva L2    1 larva L3 12hr old    9 larva L3 puffstage 1-2    23 larva L3 puffstage 3-6    24 larva L3 puffstage 7-9    18 white prepupae new    16 white prepupae 12hr    82 white prepupae 24hr    38 pupae 2d postWPP    24 pupae 3d postWPP    7 pupae 4d postWPP    20 adult male 01day    51 adult male 05day    77 adult male 30day    59 adult female 01day    34 adult female 05day    22 adult female 30day    115 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    2 embryo 16-18hr    1 embryo 18-20hr    15 embryo 20-22hr    54 embryo 22-24hr    41 larva L1    10 larva L2    1 larva L3 12hr old    9 larva L3 puffstage 1-2    23 larva L3 puffstage 3-6    24 larva L3 puffstage 7-9    18 white prepupae new    16 white prepupae 12hr    82 white prepupae 24hr    38 pupae 2d postWPP    24 pupae 3d postWPP    7 pupae 4d postWPP    20 adult male 01day    51 adult male 05day    77 adult male 30day    59 adult female 01day    34 adult female 05day    22 adult female 30day    115 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    2 embryo 16-18hr    1 embryo 18-20hr    15 embryo 20-22hr  (54) embryo 22-24hr  (41) larva L1    10 larva L2    1 larva L3 12hr old    9 larva L3 puffstage 1-2    23 larva L3 puffstage 3-6    24 larva L3 puffstage 7-9    18 white prepupae new    16 white prepupae 12hr  (82) white prepupae 24hr  (38) pupae 2d postWPP    24 pupae 3d postWPP    7 pupae 4d postWPP    20 adult male 01day  (51) adult male 05day  (77) adult male 30day  (59) adult female 01day  (34) adult female 05day    22 adult female 30day  (115) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    2 embryo 16-18hr    1 embryo 18-20hr    15 embryo 20-22hr    54 embryo 22-24hr    41 larva L1    10 larva L2    1 larva L3 12hr old    9 larva L3 puffstage 1-2    23 larva L3 puffstage 3-6    24 larva L3 puffstage 7-9    18 white prepupae new    16 white prepupae 12hr    82 white prepupae 24hr    38 pupae 2d postWPP    24 pupae 3d postWPP    7 pupae 4d postWPP    20 adult male 01day    51 adult male 05day    77 adult male 30day    59 adult female 01day    34 adult female 05day    22 adult female 30day  115 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    1 embryo 14-16hr    2 embryo 16-18hr    1 embryo 18-20hr    15 embryo 20-22hr    54 embryo 22-24hr    41 larva L1    10 larva L2    1 larva L3 12hr old    9 larva L3 puffstage 1-2    23 larva L3 puffstage 3-6    24 larva L3 puffstage 7-9    18 white prepupae new    16 white prepupae 12hr    82 white prepupae 24hr    38 pupae 2d postWPP    24 pupae 3d postWPP    7 pupae 4d postWPP    20 adult male 01day    51 adult male 05day    77 adult male 30day    59 adult female 01day    34 adult female 05day    22 adult female 30day    115 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    4 heat shock, 4-day adult    16 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    0 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult    40 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    14 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    31 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    24 Rotenone 2 μg 12 hrs, larvae L3    32 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    4 heat shock, 4-day adult    16 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    0 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult  (40) Ethanol 2.5% 3 hrs, larvae L3  (30) Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    14 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (31) Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    24 Rotenone 2 μg 12 hrs, larvae L3  (32) Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    4 heat shock, 4-day adult    16 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    0 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult    40 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    14 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    31 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    24 Rotenone 2 μg 12 hrs, larvae L3    32 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    4 heat shock, 4-day adult    16 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    0 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult    40 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    14 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    31 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    24 Rotenone 2 μg 12 hrs, larvae L3    32 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    4 heat shock, 4-day adult    16 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    0 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult    40 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    14 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    31 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    24 Rotenone 2 μg 12 hrs, larvae L3    32 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    4 heat shock, 4-day adult    16 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    0 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult  (40) Ethanol 2.5% 3 hrs, larvae L3  30 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    14 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  31 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    24 Rotenone 2 μg 12 hrs, larvae L3  32 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    4 heat shock, 4-day adult    16 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    0 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult    40 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    14 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    31 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    24 Rotenone 2 μg 12 hrs, larvae L3    32 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    6 cold shock, 4-day adult    4 heat shock, 4-day adult    16 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    1 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    13 Copper 0.5 mM 12 hrs, larvae L3    0 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult    40 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    14 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    31 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    24 Rotenone 2 μg 12 hrs, larvae L3    32 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_04
External Data & Images
Linkouts	BDGP expression data • RH07321 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0053470 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • Stencil:2R:8476483:8477383:GENSCAN
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG33470 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG33470 Class Mutagen Stocks Known lesion CG33470GL01488 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG33470HM05026 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{TRiP.GL01488} NA P{TRiP.HM05026} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
	There is no information supporting a biological process, cellular component or molecular function term for this gene. (Based on a review of available data on: 2013-03-13)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG33470 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0053470
Orthologs
OrthoDB Orthologs (18) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6DBV18 Dipteran inclusive ortholog search No orthologs identified Insect inclusive ortholog search No orthologs identified Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG6DBV18)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\IM10     Drosophila melanogaster fruit fly  Dmel\CG13749     Drosophila melanogaster fruit fly  Dmel\CG33470     Drosophila simulans   Dsim\GD10965   Y Drosophila simulans   Dsim\GD10615   Y Drosophila sechellia   Dsec\GM21466   Y Drosophila sechellia   Dsec\GM21080   Y Drosophila erecta   Dere\GG20379   Y Drosophila yakuba   Dyak\GE12540   Y Drosophila ananassae   Dana\GF13690   Y Drosophila ananassae   Dana\GF12218   Y Drosophila pseudoobscura pseudoobscura   Dpse\GA24235   Y Drosophila persimilis   Dper\GL11683   Y Drosophila willistoni   Dwil\GK10648   Y Drosophila virilis   Dvir\GJ21308   Y Drosophila virilis   Dvir\GJ21309   Y Drosophila mojavensis   Dmoj\GI18936   Y Drosophila grimshawi   Dgri\GH23113   Y
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
Bloomington	28540 y1 v1; P{TRiP.HM05026}attP2 43147 y1 v1; P{TRiP.GL01488}attP2/TM3, Sb1
Genomic Clones ( 1 )
	BACR48I15 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 106 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	HL05792 RH07321
Other clones	DPiM_RH07321
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH01391 GH05127 GH05479 GH06057 GH06239 GH06379 GH06503 GH06533 GH08022 GH09145 GH09146 GH09287 GH10802 GH11028 GH11366 GH12221 GH13547 GH14895 GH15234 GH15602 GH17494 GH22085 GH24042 GH26295 LP01667 LP06148 LP06539 LP20957 RE07878 RE20915 RE42487 RE43893 RE50238 RE53648 RE57784 RE62434 RE66550 RH07289 RH11512 RH12706 RH13532 RH17367 RH17561 RH18690 RH18944 RH21442 RH22204 RH22502 RH23435 RH24179 RH26770 RH32603 RH34390 RH36771 RH38545 RH41393 RH43075 RH44839 RH45442 RH46308 RH46802 RH47002 RH49692 RH50478 RH51130 RH53015 RH53859 RH54782 RH56911 RH58148 RH64177 RH65904 RH69473 RH69580 RH70325
Other clones	51327 AM02255 CK01.81D.C2 Dmel_dig_005634_0708_0711 Dmel_dig_006674_0703_2930 Dmel_dig_006712_0663_0525 Dmel_dig_018604_0681_3002 Dmel_neb_014847_0122_2872 EC00473 EC00873 EK064331 EK158860 EK162055 EK214006 EK264709 ESG016b.E21_H06 IP04240 IP04340 IP05282 IP14553 RH08914 RP004086836 RP004127794 RP004163089 RP004202491 RP004215320 RP004261378 RP004468054
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0053470 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 2768831
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	New annotation (CG33470) in release 3.2 of the genome annotation. (FlyBase Genome Annotators, 2004)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_206107 NM_206108 RefSeq (Proteins) • NP_995829 NP_995830 DDBJ / EMBL / GenBank • AAS64856 AAS64857 CX309441 CX309442 Entrez Gene - A searchable database of RefSeq genes. • 2768831 UniProtKB/Swiss-Prot • Q8ML70
Other Crossreferences
	BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • RH07321
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0053470 DRSC - Results from RNAi screens. • FBgn0053470 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0053470 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • Stencil:2R:8476483:8477383:GENSCAN FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0053470 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 2768831 modMine - Data generated by the modENCODE project. • FBgn0053470
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	CG33470 (Rynes et al., 2012, Perkins et al., 2009, Ni et al., 2010.12.1) unnamed (Yandell et al., 2005)
Name Synonym
Secondary FlyBase IDs
References ( 11 )
Research paper	Rynes et al., 2012, Mol. Cell. Biol. 32(19): 3949--3962 Activating transcription factor 3 regulates immune and metabolic homeostasis. [FBrf0219385] Yandell et al., 2005, Proc. Natl. Acad. Sci. U.S.A. 102(5): 1566--1571 A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome. [FBrf0183655]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Yandell et al., 2005, Proc. Natl. Acad. Sci. U.S.A.: Validation of gene predictions in Drosophila melanogaster. Supplementary information for Yandell et al., 2005, Proc. Natl. Acad. Sci. USA 102(5): 1566--1571. [FBrf0183657]
Personal communication to FlyBase	Ni et al., 2010.12.1, A genome-scale shRNA resource for transgenic RNAi in Drosophila. A genome-scale shRNA resource for transgenic RNAi in Drosophila. [FBrf0212437] Perkins et al., 2009, Update to TRiP stock collection. Update to TRiP stock collection. [FBrf0208864]
FlyBase analysis	FlyBase Curators, 2010-, Gene Ontology (GO) annotation review. Gene Ontology (GO) annotation review. [FBrf0216433] FlyBase Genome Annotators, 2004, Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 3.2 of the annotated D.melanogaster genome. [FBrf0166453] FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398]
Website	Fisher et al., 2012, BDGP insitu homepage BDGP insitu homepage [FBrf0219073]