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Gene Dmel\CR34047

General Information
Symbol	Dmel\CR34047	Species	D. melanogaster
Name		Annotation symbol	CR34047
Feature type	non_protein_coding_gene	FlyBase ID	FBgn0054047
Gene Model Status	Current	Stock availability	1 publicly available
Also Known As	CG34047
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	64C5-64C5	Sequence location	3L:5,098,376..5,099,795 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CR34047 (FBgn0054047). It is a non_protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very low expression to a trough of no expression detected. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: No expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1628193_s_at partially aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG34047: 7 out of 14 probes fall into this exonic region. Gene sequence location is 3L:5098376..5099795.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 64C5-64C5
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CR34047 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.40 Probable lncRNA gene; may encode small polypeptide(s).
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt)   CR34047-RB FBtr0308936  NR_048231   1315
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence   Name BT125023   BT133117   CX309607   CX309608
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: No expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    2.05 Larval Midgut    4.8 Larval Hindgut    1.6 Larval Malpighian Tubules    2.3 Larval Fat Body    7 Larval Salivary Gland    4.4 Larval Trachea    1.975 Larval Carcass    6.025 Adult Head    2.7 Adult Eye    2.375 Adult Brain    1.8 Adult Thoracic-Abdominal Ganglion    3.5 Adult Crop    2.2 Adult Midgut    3.5 Adult Hindgut    3.4 Adult Malpighian Tubules    2.5 Adult Fat Body    5.3 Adult Salivary Gland    12.7 Adult Heart    2.575 Adult VirginFemale Spermatheca    4 Adult InseminatedFemale Spermatheca    4.4 Adult Ovary    2.2 Adult Testis    1.4 Adult Male Accessory Gland    3.6 Adult Carcass    6.2 Expression Level Scale  None   Low  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    2.05 Larval Midgut    4.8 Larval Hindgut    1.6 Larval Malpighian Tubules    2.3 Larval Fat Body    7 Larval Salivary Gland    4.4 Larval Trachea    1.975 Larval Carcass    6.025 Adult Head    2.7 Adult Eye    2.375 Adult Brain    1.8 Adult Thoracic-Abdominal Ganglion    3.5 Adult Crop    2.2 Adult Midgut    3.5 Adult Hindgut    3.4 Adult Malpighian Tubules    2.5 Adult Fat Body    5.3 Adult Salivary Gland    12.7 Adult Heart    2.575 Adult VirginFemale Spermatheca    4 Adult InseminatedFemale Spermatheca    4.4 Adult Ovary    2.2 Adult Testis    1.4 Adult Male Accessory Gland    3.6 Adult Carcass    6.2 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    2.05 Larval Midgut    4.8 Larval Hindgut    1.6 Larval Malpighian Tubules    2.3 Larval Fat Body    7 Larval Salivary Gland    4.4 Larval Trachea    1.975 Larval Carcass    6.025 Adult Head    2.7 Adult Eye    2.375 Adult Brain    1.8 Adult Thoracic-Abdominal Ganglion    3.5 Adult Crop    2.2 Adult Midgut    3.5 Adult Hindgut    3.4 Adult Malpighian Tubules    2.5 Adult Fat Body    5.3 Adult Salivary Gland    12.7 Adult Heart    2.575 Adult VirginFemale Spermatheca    4 Adult InseminatedFemale Spermatheca    4.4 Adult Ovary    2.2 Adult Testis    1.4 Adult Male Accessory Gland    3.6 Adult Carcass    6.2 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    2.05 Larval Midgut    4.8 Larval Hindgut    1.6 Larval Malpighian Tubules    2.3 Larval Fat Body    7 Larval Salivary Gland    4.4 Larval Trachea    1.975 Larval Carcass    6.025 Adult Head    2.7 Adult Eye    2.375 Adult Brain    1.8 Adult Thoracic-Abdominal Ganglion    3.5 Adult Crop    2.2 Adult Midgut    3.5 Adult Hindgut    3.4 Adult Malpighian Tubules    2.5 Adult Fat Body    5.3 Adult Salivary Gland    12.7 Adult Heart    2.575 Adult VirginFemale Spermatheca    4 Adult InseminatedFemale Spermatheca    4.4 Adult Ovary    2.2 Adult Testis    1.4 Adult Male Accessory Gland    3.6 Adult Carcass    6.2 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    2.05 Larval Midgut    4.8 Larval Hindgut    1.6 Larval Malpighian Tubules    2.3 Larval Fat Body    7 Larval Salivary Gland    4.4 Larval Trachea    1.975 Larval Carcass    6.025 Adult Head    2.7 Adult Eye    2.375 Adult Brain    1.8 Adult Thoracic-Abdominal Ganglion    3.5 Adult Crop    2.2 Adult Midgut    3.5 Adult Hindgut    3.4 Adult Malpighian Tubules    2.5 Adult Fat Body    5.3 Adult Salivary Gland    12.7 Adult Heart    2.575 Adult VirginFemale Spermatheca    4 Adult InseminatedFemale Spermatheca    4.4 Adult Ovary    2.2 Adult Testis    1.4 Adult Male Accessory Gland    3.6 Adult Carcass    6.2 Expression Level Scale  None   Low  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    2.05 Larval Midgut    4.8 Larval Hindgut    1.6 Larval Malpighian Tubules    2.3 Larval Fat Body    7 Larval Salivary Gland    4.4 Larval Trachea    1.975 Larval Carcass    6.025 Adult Head    2.7 Adult Eye    2.375 Adult Brain    1.8 Adult Thoracic-Abdominal Ganglion    3.5 Adult Crop    2.2 Adult Midgut    3.5 Adult Hindgut    3.4 Adult Malpighian Tubules    2.5 Adult Fat Body    5.3 Adult Salivary Gland    12.7 Adult Heart    2.575 Adult VirginFemale Spermatheca    4 Adult InseminatedFemale Spermatheca    4.4 Adult Ovary    2.2 Adult Testis    1.4 Adult Male Accessory Gland    3.6 Adult Carcass    6.2 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    2.05 Larval Midgut    4.8 Larval Hindgut    1.6 Larval Malpighian Tubules    2.3 Larval Fat Body    7 Larval Salivary Gland    4.4 Larval Trachea    1.975 Larval Carcass    6.025 Adult Head    2.7 Adult Eye    2.375 Adult Brain    1.8 Adult Thoracic-Abdominal Ganglion    3.5 Adult Crop    2.2 Adult Midgut    3.5 Adult Hindgut    3.4 Adult Malpighian Tubules    2.5 Adult Fat Body    5.3 Adult Salivary Gland    12.7 Adult Heart    2.575 Adult VirginFemale Spermatheca    4 Adult InseminatedFemale Spermatheca    4.4 Adult Ovary    2.2 Adult Testis    1.4 Adult Male Accessory Gland    3.6 Adult Carcass    6.2 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    2.05 Larval Midgut    4.8 Larval Hindgut    1.6 Larval Malpighian Tubules    2.3 Larval Fat Body    7 Larval Salivary Gland    4.4 Larval Trachea    1.975 Larval Carcass    6.025 Adult Head    2.7 Adult Eye    2.375 Adult Brain    1.8 Adult Thoracic-Abdominal Ganglion    3.5 Adult Crop    2.2 Adult Midgut    3.5 Adult Hindgut    3.4 Adult Malpighian Tubules    2.5 Adult Fat Body    5.3 Adult Salivary Gland    12.7 Adult Heart    2.575 Adult VirginFemale Spermatheca    4 Adult InseminatedFemale Spermatheca    4.4 Adult Ovary    2.2 Adult Testis    1.4 Adult Male Accessory Gland    3.6 Adult Carcass    6.2 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    2.7   NA  Eye    2.375   NA  Brain    1.8   2.05  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    3.5   NA  Crop    2.2   4.8  Midgut    3.5   1.6  Hindgut    3.4   2.3  Malpighian Tubules    2.5   7  Fat Body    5.3   4.4  Salivary Gland    no informative data   NA  Heart    2.575   1.975  Trachea    NA   NA  VirginFemale Spermatheca    4   NA  InseminatedFemale Spermatheca    4.4   NA  Ovary    2.2   NA  Testis    1.4   NA  Male Accessory Gland    3.6   6.025  Carcass    6.2 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very low expression to a trough of no expression detected. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the pupal period. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Treatments RNA-Seq
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (Graveley et al., 2011) mE1_20_mRNA_expression_cluster_08
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0054047 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • HDC08545
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CR34047 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CR34047 Class Mutagen Stocks Known lesion CR34047KK113804 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
	There is no information supporting a biological process, cellular component or molecular function term for this gene. (Based on a review of available data on: 2006-05-23)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	non_protein_coding_gene (FlyBase Genome Annotators, 2011) nuclear_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CR34047 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0054047
Orthologs
OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search No orthologs identified Dipteran inclusive ortholog search No orthologs identified Insect inclusive ortholog search No orthologs identified Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (None identified)
No orthologies identified
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (1) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila erecta Dere\GG14148
Stocks & Reagents
Stocks Listed in FlyBase ( 1 )
VDRC	v103474 P{KK113804}VIE-260B
Genomic Clones ( 0 )
cDNA Clones ( 3 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones	FI19101 RT09024
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones	AM03101
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0054047 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 12798361
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: CG34047 HDC08545 (FlyBase Genome Annotators, 2005)
Source for database merge of
Additional comments
Other Comments
	Annotation CG34047 renamed CR34047 in release 5.40 of the genome annotation. (FlyBase Genome Annotators, 2011) New annotation (CG34047) in release 4.3 of the genome annotation. (FlyBase Genome Annotators, 2005)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NR_048231 DDBJ / EMBL / GenBank • ABC66129 CX309607 CX309608 Entrez Gene - A searchable database of RefSeq genes. • 12798361 UniProtKB/TrEMBL • Q2PE04
Other Crossreferences
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0054047 DRSC - Results from RNAi screens. • FBgn0054047 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0054047 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • HDC08545 FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0054047 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 12798361 modMine - Data generated by the modENCODE project. • FBgn0054047
Synonyms & Secondary IDs ( 5 )
Reported As
Symbol Synonym	BP1083 (Yandell et al., 2005) CG34047 (Keleman et al., 2009.8.5, Lin and Kellis, 2006.12.15) CR34047 (FlyBase Genome Annotators, 2011) HDC08545   unnamed (Yandell et al., 2005)
Name Synonym
Secondary FlyBase IDs
	FBgn0082657
References ( 9 )
Research paper	Yandell et al., 2005, Proc. Natl. Acad. Sci. U.S.A. 102(5): 1566--1571 A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome. [FBrf0183655] Hild et al., 2003, Genome Biol. 5(1): R3 An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome. [FBrf0167699]
Supplementary material	Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] Yandell et al., 2005, Proc. Natl. Acad. Sci. U.S.A.: Validation of gene predictions in Drosophila melanogaster. Supplementary information for Yandell et al., 2005, Proc. Natl. Acad. Sci. USA 102(5): 1566--1571. [FBrf0183657]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Lin and Kellis, 2006.12.15, Gene models flagged as uncertain or dubious. Gene models flagged as uncertain or dubious. [FBrf0204466]
FlyBase analysis	FlyBase Genome Annotators, 2011, Changes affecting gene model number or type in release 5.40 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 5.40 of the annotated D.melanogaster genome. [FBrf0214297] FlyBase Genome Annotators, 2005, Changes affecting gene model number or type in release 4.3 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 4.3 of the annotated D.melanogaster genome. [FBrf0188580] FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398]