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Gene Dmel\CG33713

General Information
Symbol	Dmel\CG33713	Species	D. melanogaster
Name		Annotation symbol	CG33713
Feature type	protein_coding_gene	FlyBase ID	FBgn0064116
Gene Model Status	Current	Stock availability	1 publicly available
Also Known As	CG33071, cg1704
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	19F4-19F4	Sequence location	X:21,188,961..21,190,299 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG33713 (FBgn0064116). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: fatty-acyl-CoA binding. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Acyl-CoA-binding protein, ACBP; Ankyrin repeat; Ankyrin repeat-containing domain; FERM/acyl-CoA-binding protein, 3-helical bundle. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed within 06-12 hour embryonic stages, during early larval stages. This gene is annotated by FlyBase as a dicistronic gene, meaning that some or all of its transcripts encode two or more polypeptide-coding open reading frames (ORFs) , with each ORF assigned to a different gene. The distribution of RNA-Seq coverage data amongst the different encoded genes cannot be determined. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult hindgut, adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult midgut, larval Malpighian tubules, larval fat body. Comments on Affy2 ProbeSet: ProbeSet 1636626_s_at aligns to a genomic region shared by exons of 2 FlyBase-annotated genes; hence it is impossible to interpret the expression pattern and levels of CG33713 expression signal. See the GBrowse view of CG33713 to determine the overlapping gene(s). Gene sequence location is X:21188961..21190299.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 19F4-19F4   Limits computationally determined from genome sequence between P{EP}CG1702EP1525 and P{EP}EP1465&P{EP}CG1486EP1192
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG33713 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	gene_with_dicistronic_mRNA ; SO:0000722
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG33713-RA FBtr0077227  NM_001031915   1257   243 CG33713-RB FBtr0091702  NM_001031914   1280   243
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG33713-PA   FBpp0076922   27.5   243   4.89     NP_001027086   AAF50834 CG33713-PB   FBpp0076924   27.5   243   4.89     NP_001027085   AAN09671
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Acyl-CoA-binding protein, ACBP (IPR000582) Ankyrin repeat (IPR002110) FERM/acyl-CoA-binding protein, 3-helical bundle (IPR014352) Ankyrin repeat-containing domain (IPR020683)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA201702   AA393006   AA696136   AE014298 AAF50834   AE014298 AAN09671   AW941244   AY060903 AAL28451   BF502968   BH840676   BI173565   BI234757   BI353382   BI353389   BI354715   BI619298   BI626789   BP543375   BP543376   BP545103   BP545104   BT012495   CK659792   CK661860   CO273906   CO282106   CO297405   CO308319   CO332890   CO343642   EC066212   EC199557   EC213260   EC228270   EC258507   ES690341   EV584857   EV591775   GH747662   GH749201   GH750174   GH753730   GH755249   GH757451   GH760133   GH770128   GH772790   GH773722   GH777157   GH784508   GH790383   GH791078   GH794275   GH797022   GH798478   GH800550   GH805544   GH808856   GH812115   GH812251   GH814766   GH823629   GH823782   GH824929   GH826864   GH827283   GH829401   GH831911   GH835853   GH835990   GH836731   GH840978   GH841985   GH845675   GH850860   GH852037   GH852638   GH855763   GH856369   GH860349   GH861636   GH873765   GH874814   GH875223   GH881726   GH882442   GH883279   GH884014   GH885430   GH886055   GH886107   GH888029   GH892774   GH894087   GH894926   GH899753   GH901170   GH901697   GH906700   GH911873   GH913979   GH916336   GH919128   GH920248   GH921147   GH921221   GH921356   GH921576   GH922505   GH924168   GH931117   GH931265   GH931359   GH936379   GH938286   GH938882   GH940783
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VRG6
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 11 -- 12   anal pad primordium   (Fisher et al., 2012) Comment:reported as anal pad specific anlage anterior midgut primordium   (Fisher et al., 2012) head mesoderm   (Fisher et al., 2012) posterior midgut primordium   (Fisher et al., 2012) salivary gland body primordium   (Fisher et al., 2012) trunk mesoderm   (Fisher et al., 2012) embryonic stage 13 -- 16   dorsal pharyngeal muscle   (Fisher et al., 2012) embryonic anal pad   (Fisher et al., 2012) embryonic hindgut   (Fisher et al., 2012) embryonic midgut chamber   (Fisher et al., 2012) embryonic/larval midgut   (Fisher et al., 2012) embryonic/larval muscle system   (Fisher et al., 2012) embryonic/larval somatic muscle   (Fisher et al., 2012) gastric caecum   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult hindgut, adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult midgut, larval Malpighian tubules, larval fat body. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    877.825 Larval Midgut    479.2 Larval Hindgut    980.8 Larval Malpighian Tubules    410 Larval Fat Body    304.3 Larval Salivary Gland    1141.7 Larval Trachea    962.625 Larval Carcass    828.1 Adult Head    662.5 Adult Eye    983.325 Adult Brain    932.8 Adult Thoracic-Abdominal Ganglion    1064.8 Adult Crop    586.8 Adult Midgut    426.6 Adult Hindgut    882 Adult Malpighian Tubules    803.9 Adult Fat Body    648.2 Adult Salivary Gland    937.1 Adult Heart    650.35 Adult VirginFemale Spermatheca    669.4 Adult InseminatedFemale Spermatheca    667.4 Adult Ovary    719 Adult Testis    517.2 Adult Male Accessory Gland    1197.7 Adult Carcass    582.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (877.825) Larval Midgut    479.2 Larval Hindgut  (980.8) Larval Malpighian Tubules    410 Larval Fat Body    304.3 Larval Salivary Gland  (1141.7) Larval Trachea  (962.625) Larval Carcass  (828.1) Adult Head  (662.5) Adult Eye  (983.325) Adult Brain  (932.8) Adult Thoracic-Abdominal Ganglion  (1064.8) Adult Crop  (586.8) Adult Midgut    426.6 Adult Hindgut  (882) Adult Malpighian Tubules  (803.9) Adult Fat Body  (648.2) Adult Salivary Gland  (937.1) Adult Heart  (650.35) Adult VirginFemale Spermatheca  (669.4) Adult InseminatedFemale Spermatheca  (667.4) Adult Ovary  (719) Adult Testis  517.2 Adult Male Accessory Gland  (1197.7) Adult Carcass  (582.1) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    877.825 Larval Midgut    479.2 Larval Hindgut    980.8 Larval Malpighian Tubules    410 Larval Fat Body    304.3 Larval Salivary Gland  (1141.7) Larval Trachea    962.625 Larval Carcass    828.1 Adult Head    662.5 Adult Eye    983.325 Adult Brain    932.8 Adult Thoracic-Abdominal Ganglion  1064.8 Adult Crop    586.8 Adult Midgut    426.6 Adult Hindgut    882 Adult Malpighian Tubules    803.9 Adult Fat Body    648.2 Adult Salivary Gland    937.1 Adult Heart    650.35 Adult VirginFemale Spermatheca    669.4 Adult InseminatedFemale Spermatheca    667.4 Adult Ovary    719 Adult Testis    517.2 Adult Male Accessory Gland  (1197.7) Adult Carcass    582.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    877.825 Larval Midgut    479.2 Larval Hindgut    980.8 Larval Malpighian Tubules    410 Larval Fat Body    304.3 Larval Salivary Gland    1141.7 Larval Trachea    962.625 Larval Carcass    828.1 Adult Head    662.5 Adult Eye    983.325 Adult Brain    932.8 Adult Thoracic-Abdominal Ganglion    1064.8 Adult Crop    586.8 Adult Midgut    426.6 Adult Hindgut    882 Adult Malpighian Tubules    803.9 Adult Fat Body    648.2 Adult Salivary Gland    937.1 Adult Heart    650.35 Adult VirginFemale Spermatheca    669.4 Adult InseminatedFemale Spermatheca    667.4 Adult Ovary    719 Adult Testis    517.2 Adult Male Accessory Gland    1197.7 Adult Carcass    582.1 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    877.825 Larval Midgut    479.2 Larval Hindgut    980.8 Larval Malpighian Tubules    410 Larval Fat Body    304.3 Larval Salivary Gland    1141.7 Larval Trachea    962.625 Larval Carcass    828.1 Adult Head    662.5 Adult Eye    983.325 Adult Brain    932.8 Adult Thoracic-Abdominal Ganglion    1064.8 Adult Crop    586.8 Adult Midgut    426.6 Adult Hindgut    882 Adult Malpighian Tubules    803.9 Adult Fat Body    648.2 Adult Salivary Gland    937.1 Adult Heart    650.35 Adult VirginFemale Spermatheca    669.4 Adult InseminatedFemale Spermatheca    667.4 Adult Ovary    719 Adult Testis    517.2 Adult Male Accessory Gland    1197.7 Adult Carcass    582.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (877.825) Larval Midgut    479.2 Larval Hindgut  (980.8) Larval Malpighian Tubules    410 Larval Fat Body    304.3 Larval Salivary Gland  (1141.7) Larval Trachea  (962.625) Larval Carcass  (828.1) Adult Head  662.5 Adult Eye  (983.325) Adult Brain  (932.8) Adult Thoracic-Abdominal Ganglion  (1064.8) Adult Crop  586.8 Adult Midgut    426.6 Adult Hindgut  (882) Adult Malpighian Tubules  803.9 Adult Fat Body  648.2 Adult Salivary Gland  (937.1) Adult Heart  650.35 Adult VirginFemale Spermatheca  669.4 Adult InseminatedFemale Spermatheca  667.4 Adult Ovary  719 Adult Testis  517.2 Adult Male Accessory Gland  (1197.7) Adult Carcass  582.1 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    877.825 Larval Midgut    479.2 Larval Hindgut    980.8 Larval Malpighian Tubules    410 Larval Fat Body    304.3 Larval Salivary Gland  1141.7 Larval Trachea    962.625 Larval Carcass    828.1 Adult Head    662.5 Adult Eye    983.325 Adult Brain    932.8 Adult Thoracic-Abdominal Ganglion  1064.8 Adult Crop    586.8 Adult Midgut    426.6 Adult Hindgut    882 Adult Malpighian Tubules    803.9 Adult Fat Body    648.2 Adult Salivary Gland    937.1 Adult Heart    650.35 Adult VirginFemale Spermatheca    669.4 Adult InseminatedFemale Spermatheca    667.4 Adult Ovary    719 Adult Testis    517.2 Adult Male Accessory Gland  1197.7 Adult Carcass    582.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    877.825 Larval Midgut    479.2 Larval Hindgut    980.8 Larval Malpighian Tubules    410 Larval Fat Body    304.3 Larval Salivary Gland    1141.7 Larval Trachea    962.625 Larval Carcass    828.1 Adult Head    662.5 Adult Eye    983.325 Adult Brain    932.8 Adult Thoracic-Abdominal Ganglion    1064.8 Adult Crop    586.8 Adult Midgut    426.6 Adult Hindgut    882 Adult Malpighian Tubules    803.9 Adult Fat Body    648.2 Adult Salivary Gland    937.1 Adult Heart    650.35 Adult VirginFemale Spermatheca    669.4 Adult InseminatedFemale Spermatheca    667.4 Adult Ovary    719 Adult Testis    517.2 Adult Male Accessory Gland    1197.7 Adult Carcass    582.1 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    662.5   NA  Eye    983.325   NA  Brain    932.8   877.825  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    1064.8   NA  Crop    586.8   479.2  Midgut    426.6   980.8  Hindgut    882   410  Malpighian Tubules    803.9   304.3  Fat Body    648.2   1141.7  Salivary Gland    937.1   NA  Heart    650.35   962.625  Trachea    NA   NA  VirginFemale Spermatheca    669.4   NA  InseminatedFemale Spermatheca    667.4   NA  Ovary    719   NA  Testis    517.2   NA  Male Accessory Gland    1197.7   828.1  Carcass    582.1 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    45 central nervous system, larvae L3    32 central nervous system, pupae P8    25 head, virgin 1-day female    27 head, virgin 4-day female    22 head, virgin 20-day female    21 head, mated 1-day female    18 head, mated 4-day female    20 head, mated 20-day female    18 head, mated 1-day male    34 head, mated 4-day male    33 head, mated 20-day male    36 salivary gland, larvae L3 wandering    6 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    17 digestive system, 1-day adult    25 digestive system, 4-day adult    24 digestive system, 20-day adult    18 fat body, larvae L3 wandering    6 fat body, white prepupae    12 fat body, pupae P8    33 carcass, larvae L3 wandering    31 carcass, 1-day adult    20 carcass, 4-day adult    20 carcass, 20-day adult    17 ovary, virgin 4-day female    35 ovary, mated 4-day female    32 testis, mated 4-day male    64 accessory gland, mated 4-day male    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (45) central nervous system, larvae L3  (32) central nervous system, pupae P8    25 head, virgin 1-day female  (27) head, virgin 4-day female    22 head, virgin 20-day female    21 head, mated 1-day female    18 head, mated 4-day female    20 head, mated 20-day female    18 head, mated 1-day male  (34) head, mated 4-day male  (33) head, mated 20-day male  (36) salivary gland, larvae L3 wandering    6 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    17 digestive system, 1-day adult    25 digestive system, 4-day adult    24 digestive system, 20-day adult    18 fat body, larvae L3 wandering    6 fat body, white prepupae    12 fat body, pupae P8  (33) carcass, larvae L3 wandering  (31) carcass, 1-day adult    20 carcass, 4-day adult    20 carcass, 20-day adult    17 ovary, virgin 4-day female  (35) ovary, mated 4-day female  (32) testis, mated 4-day male  (64) accessory gland, mated 4-day male    22 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    45 central nervous system, larvae L3    32 central nervous system, pupae P8    25 head, virgin 1-day female    27 head, virgin 4-day female    22 head, virgin 20-day female    21 head, mated 1-day female    18 head, mated 4-day female    20 head, mated 20-day female    18 head, mated 1-day male    34 head, mated 4-day male    33 head, mated 20-day male    36 salivary gland, larvae L3 wandering    6 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    17 digestive system, 1-day adult    25 digestive system, 4-day adult    24 digestive system, 20-day adult    18 fat body, larvae L3 wandering    6 fat body, white prepupae    12 fat body, pupae P8    33 carcass, larvae L3 wandering    31 carcass, 1-day adult    20 carcass, 4-day adult    20 carcass, 20-day adult    17 ovary, virgin 4-day female    35 ovary, mated 4-day female    32 testis, mated 4-day male    64 accessory gland, mated 4-day male    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    45 central nervous system, larvae L3    32 central nervous system, pupae P8    25 head, virgin 1-day female    27 head, virgin 4-day female    22 head, virgin 20-day female    21 head, mated 1-day female    18 head, mated 4-day female    20 head, mated 20-day female    18 head, mated 1-day male    34 head, mated 4-day male    33 head, mated 20-day male    36 salivary gland, larvae L3 wandering    6 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    17 digestive system, 1-day adult    25 digestive system, 4-day adult    24 digestive system, 20-day adult    18 fat body, larvae L3 wandering    6 fat body, white prepupae    12 fat body, pupae P8    33 carcass, larvae L3 wandering    31 carcass, 1-day adult    20 carcass, 4-day adult    20 carcass, 20-day adult    17 ovary, virgin 4-day female    35 ovary, mated 4-day female    32 testis, mated 4-day male    64 accessory gland, mated 4-day male    22 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    45 central nervous system, larvae L3    32 central nervous system, pupae P8    25 head, virgin 1-day female    27 head, virgin 4-day female    22 head, virgin 20-day female    21 head, mated 1-day female    18 head, mated 4-day female    20 head, mated 20-day female    18 head, mated 1-day male    34 head, mated 4-day male    33 head, mated 20-day male    36 salivary gland, larvae L3 wandering    6 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    17 digestive system, 1-day adult    25 digestive system, 4-day adult    24 digestive system, 20-day adult    18 fat body, larvae L3 wandering    6 fat body, white prepupae    12 fat body, pupae P8    33 carcass, larvae L3 wandering    31 carcass, 1-day adult    20 carcass, 4-day adult    20 carcass, 20-day adult    17 ovary, virgin 4-day female    35 ovary, mated 4-day female    32 testis, mated 4-day male    64 accessory gland, mated 4-day male    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (45) central nervous system, larvae L3  32 central nervous system, pupae P8    25 head, virgin 1-day female  27 head, virgin 4-day female    22 head, virgin 20-day female    21 head, mated 1-day female    18 head, mated 4-day female    20 head, mated 20-day female    18 head, mated 1-day male  (34) head, mated 4-day male  (33) head, mated 20-day male  (36) salivary gland, larvae L3 wandering    6 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    17 digestive system, 1-day adult    25 digestive system, 4-day adult    24 digestive system, 20-day adult    18 fat body, larvae L3 wandering    6 fat body, white prepupae    12 fat body, pupae P8  (33) carcass, larvae L3 wandering  31 carcass, 1-day adult    20 carcass, 4-day adult    20 carcass, 20-day adult    17 ovary, virgin 4-day female  (35) ovary, mated 4-day female  32 testis, mated 4-day male  (64) accessory gland, mated 4-day male    22 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    45 central nervous system, larvae L3    32 central nervous system, pupae P8    25 head, virgin 1-day female    27 head, virgin 4-day female    22 head, virgin 20-day female    21 head, mated 1-day female    18 head, mated 4-day female    20 head, mated 20-day female    18 head, mated 1-day male    34 head, mated 4-day male    33 head, mated 20-day male    36 salivary gland, larvae L3 wandering    6 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    17 digestive system, 1-day adult    25 digestive system, 4-day adult    24 digestive system, 20-day adult    18 fat body, larvae L3 wandering    6 fat body, white prepupae    12 fat body, pupae P8    33 carcass, larvae L3 wandering    31 carcass, 1-day adult    20 carcass, 4-day adult    20 carcass, 20-day adult    17 ovary, virgin 4-day female    35 ovary, mated 4-day female    32 testis, mated 4-day male    64 accessory gland, mated 4-day male    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    45 central nervous system, larvae L3    32 central nervous system, pupae P8    25 head, virgin 1-day female    27 head, virgin 4-day female    22 head, virgin 20-day female    21 head, mated 1-day female    18 head, mated 4-day female    20 head, mated 20-day female    18 head, mated 1-day male    34 head, mated 4-day male    33 head, mated 20-day male    36 salivary gland, larvae L3 wandering    6 salivary gland, white prepupae    11 digestive system, larvae L3 wandering    17 digestive system, 1-day adult    25 digestive system, 4-day adult    24 digestive system, 20-day adult    18 fat body, larvae L3 wandering    6 fat body, white prepupae    12 fat body, pupae P8    33 carcass, larvae L3 wandering    31 carcass, 1-day adult    20 carcass, 4-day adult    20 carcass, 20-day adult    17 ovary, virgin 4-day female    35 ovary, mated 4-day female    32 testis, mated 4-day male    64 accessory gland, mated 4-day male    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed within 06-12 hour embryonic stages, during early larval stages. This gene is annotated by FlyBase as a dicistronic gene, meaning that some or all of its transcripts encode two or more polypeptide-coding open reading frames (ORFs) , with each ORF assigned to a different gene. The distribution of RNA-Seq coverage data amongst the different encoded genes cannot be determined. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    69 embryo 02-04hr    45 embryo 04-06hr    28 embryo 06-08hr    71 embryo 08-10hr    97 embryo 10-12hr    160 embryo 12-14hr    122 embryo 14-16hr    129 embryo 16-18hr    100 embryo 18-20hr    92 embryo 20-22hr    109 embryo 22-24hr    95 larva L1    197 larva L2    161 larva L3 12hr old    98 larva L3 puffstage 1-2    52 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    63 white prepupae new    65 white prepupae 12hr    61 white prepupae 24hr    72 pupae 2d postWPP    96 pupae 3d postWPP    129 pupae 4d postWPP    115 adult male 01day    97 adult male 05day    72 adult male 30day    77 adult female 01day    104 adult female 05day    78 adult female 30day    79 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (69) embryo 02-04hr  (45) embryo 04-06hr  (28) embryo 06-08hr  (71) embryo 08-10hr  (97) embryo 10-12hr  (160) embryo 12-14hr  (122) embryo 14-16hr  (129) embryo 16-18hr  (100) embryo 18-20hr  (92) embryo 20-22hr  (109) embryo 22-24hr  (95) larva L1  (197) larva L2  (161) larva L3 12hr old  (98) larva L3 puffstage 1-2  (52) larva L3 puffstage 3-6  (57) larva L3 puffstage 7-9  (63) white prepupae new  (65) white prepupae 12hr  (61) white prepupae 24hr  (72) pupae 2d postWPP  (96) pupae 3d postWPP  (129) pupae 4d postWPP  (115) adult male 01day  (97) adult male 05day  (72) adult male 30day  (77) adult female 01day  (104) adult female 05day  (78) adult female 30day  (79) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    69 embryo 02-04hr    45 embryo 04-06hr    28 embryo 06-08hr    71 embryo 08-10hr    97 embryo 10-12hr  (160) embryo 12-14hr  (122) embryo 14-16hr  (129) embryo 16-18hr    100 embryo 18-20hr    92 embryo 20-22hr  (109) embryo 22-24hr    95 larva L1  (197) larva L2  (161) larva L3 12hr old    98 larva L3 puffstage 1-2    52 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    63 white prepupae new    65 white prepupae 12hr    61 white prepupae 24hr    72 pupae 2d postWPP    96 pupae 3d postWPP  (129) pupae 4d postWPP  (115) adult male 01day    97 adult male 05day    72 adult male 30day    77 adult female 01day  104 adult female 05day    78 adult female 30day    79 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    69 embryo 02-04hr    45 embryo 04-06hr    28 embryo 06-08hr    71 embryo 08-10hr    97 embryo 10-12hr    160 embryo 12-14hr    122 embryo 14-16hr    129 embryo 16-18hr    100 embryo 18-20hr    92 embryo 20-22hr    109 embryo 22-24hr    95 larva L1    197 larva L2    161 larva L3 12hr old    98 larva L3 puffstage 1-2    52 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    63 white prepupae new    65 white prepupae 12hr    61 white prepupae 24hr    72 pupae 2d postWPP    96 pupae 3d postWPP    129 pupae 4d postWPP    115 adult male 01day    97 adult male 05day    72 adult male 30day    77 adult female 01day    104 adult female 05day    78 adult female 30day    79 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    69 embryo 02-04hr    45 embryo 04-06hr    28 embryo 06-08hr    71 embryo 08-10hr    97 embryo 10-12hr    160 embryo 12-14hr    122 embryo 14-16hr    129 embryo 16-18hr    100 embryo 18-20hr    92 embryo 20-22hr    109 embryo 22-24hr    95 larva L1    197 larva L2    161 larva L3 12hr old    98 larva L3 puffstage 1-2    52 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    63 white prepupae new    65 white prepupae 12hr    61 white prepupae 24hr    72 pupae 2d postWPP    96 pupae 3d postWPP    129 pupae 4d postWPP    115 adult male 01day    97 adult male 05day    72 adult male 30day    77 adult female 01day    104 adult female 05day    78 adult female 30day    79 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (69) embryo 02-04hr  (45) embryo 04-06hr  28 embryo 06-08hr  (71) embryo 08-10hr  (97) embryo 10-12hr  (160) embryo 12-14hr  (122) embryo 14-16hr  (129) embryo 16-18hr  (100) embryo 18-20hr  (92) embryo 20-22hr  (109) embryo 22-24hr  (95) larva L1  (197) larva L2  (161) larva L3 12hr old  (98) larva L3 puffstage 1-2  (52) larva L3 puffstage 3-6  (57) larva L3 puffstage 7-9  (63) white prepupae new  (65) white prepupae 12hr  (61) white prepupae 24hr  (72) pupae 2d postWPP  (96) pupae 3d postWPP  (129) pupae 4d postWPP  (115) adult male 01day  (97) adult male 05day  (72) adult male 30day  (77) adult female 01day  (104) adult female 05day  (78) adult female 30day  (79) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    69 embryo 02-04hr    45 embryo 04-06hr    28 embryo 06-08hr    71 embryo 08-10hr    97 embryo 10-12hr  (160) embryo 12-14hr  122 embryo 14-16hr  129 embryo 16-18hr    100 embryo 18-20hr    92 embryo 20-22hr  109 embryo 22-24hr    95 larva L1  (197) larva L2  (161) larva L3 12hr old    98 larva L3 puffstage 1-2    52 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    63 white prepupae new    65 white prepupae 12hr    61 white prepupae 24hr    72 pupae 2d postWPP    96 pupae 3d postWPP  129 pupae 4d postWPP  115 adult male 01day    97 adult male 05day    72 adult male 30day    77 adult female 01day  104 adult female 05day    78 adult female 30day    79 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    69 embryo 02-04hr    45 embryo 04-06hr    28 embryo 06-08hr    71 embryo 08-10hr    97 embryo 10-12hr    160 embryo 12-14hr    122 embryo 14-16hr    129 embryo 16-18hr    100 embryo 18-20hr    92 embryo 20-22hr    109 embryo 22-24hr    95 larva L1    197 larva L2    161 larva L3 12hr old    98 larva L3 puffstage 1-2    52 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    63 white prepupae new    65 white prepupae 12hr    61 white prepupae 24hr    72 pupae 2d postWPP    96 pupae 3d postWPP    129 pupae 4d postWPP    115 adult male 01day    97 adult male 05day    72 adult male 30day    77 adult female 01day    104 adult female 05day    78 adult female 30day    79 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    177 Schneider line 2 Sg4    79 embryonic 1182-4H    52 embryonic GM2    58 embryonic Kc167    60 embryonic S1    42 embryonic S3    70 leg disc CME L1    50 wing disc CME-W2    59 wing disc ML-DmD8    47 wing disc ML-DmD9    46 wing disc ML-DmD16-c3    35 wing disc ML-DmD21    82 wing disc ML-DmD32    50 haltere disc ML-DmD17-c3    54 eye-antennal disc ML-DmD11    65 antennal disc ML-DmD20-c5    61 mixed discs ML-DmD4-c1    47 CNS ML-DmBG1-c1    52 CNS ML-DmBG2-c2    41 tumorous blood cells mbn2    74 ovary fGS/OSS    27 ovary OSC    33 ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (177) Schneider line 2 Sg4  (79) embryonic 1182-4H  (52) embryonic GM2  (58) embryonic Kc167  (60) embryonic S1  (42) embryonic S3  (70) leg disc CME L1  (50) wing disc CME-W2  (59) wing disc ML-DmD8  (47) wing disc ML-DmD9  (46) wing disc ML-DmD16-c3  (35) wing disc ML-DmD21  (82) wing disc ML-DmD32  (50) haltere disc ML-DmD17-c3  (54) eye-antennal disc ML-DmD11  (65) antennal disc ML-DmD20-c5  (61) mixed discs ML-DmD4-c1  (47) CNS ML-DmBG1-c1  (52) CNS ML-DmBG2-c2  (41) tumorous blood cells mbn2  (74) ovary fGS/OSS  (27) ovary OSC  (33) ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (177) Schneider line 2 Sg4    79 embryonic 1182-4H    52 embryonic GM2    58 embryonic Kc167    60 embryonic S1    42 embryonic S3    70 leg disc CME L1    50 wing disc CME-W2    59 wing disc ML-DmD8    47 wing disc ML-DmD9    46 wing disc ML-DmD16-c3    35 wing disc ML-DmD21    82 wing disc ML-DmD32    50 haltere disc ML-DmD17-c3    54 eye-antennal disc ML-DmD11    65 antennal disc ML-DmD20-c5    61 mixed discs ML-DmD4-c1    47 CNS ML-DmBG1-c1    52 CNS ML-DmBG2-c2    41 tumorous blood cells mbn2    74 ovary fGS/OSS    27 ovary OSC    33 ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    177 Schneider line 2 Sg4    79 embryonic 1182-4H    52 embryonic GM2    58 embryonic Kc167    60 embryonic S1    42 embryonic S3    70 leg disc CME L1    50 wing disc CME-W2    59 wing disc ML-DmD8    47 wing disc ML-DmD9    46 wing disc ML-DmD16-c3    35 wing disc ML-DmD21    82 wing disc ML-DmD32    50 haltere disc ML-DmD17-c3    54 eye-antennal disc ML-DmD11    65 antennal disc ML-DmD20-c5    61 mixed discs ML-DmD4-c1    47 CNS ML-DmBG1-c1    52 CNS ML-DmBG2-c2    41 tumorous blood cells mbn2    74 ovary fGS/OSS    27 ovary OSC    33 ovary OSS    16 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    177 Schneider line 2 Sg4    79 embryonic 1182-4H    52 embryonic GM2    58 embryonic Kc167    60 embryonic S1    42 embryonic S3    70 leg disc CME L1    50 wing disc CME-W2    59 wing disc ML-DmD8    47 wing disc ML-DmD9    46 wing disc ML-DmD16-c3    35 wing disc ML-DmD21    82 wing disc ML-DmD32    50 haltere disc ML-DmD17-c3    54 eye-antennal disc ML-DmD11    65 antennal disc ML-DmD20-c5    61 mixed discs ML-DmD4-c1    47 CNS ML-DmBG1-c1    52 CNS ML-DmBG2-c2    41 tumorous blood cells mbn2    74 ovary fGS/OSS    27 ovary OSC    33 ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (177) Schneider line 2 Sg4  (79) embryonic 1182-4H  (52) embryonic GM2  (58) embryonic Kc167  (60) embryonic S1  (42) embryonic S3  (70) leg disc CME L1  (50) wing disc CME-W2  (59) wing disc ML-DmD8  (47) wing disc ML-DmD9  (46) wing disc ML-DmD16-c3  (35) wing disc ML-DmD21  (82) wing disc ML-DmD32  (50) haltere disc ML-DmD17-c3  (54) eye-antennal disc ML-DmD11  (65) antennal disc ML-DmD20-c5  (61) mixed discs ML-DmD4-c1  (47) CNS ML-DmBG1-c1  (52) CNS ML-DmBG2-c2  (41) tumorous blood cells mbn2  (74) ovary fGS/OSS  27 ovary OSC  (33) ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (177) Schneider line 2 Sg4    79 embryonic 1182-4H    52 embryonic GM2    58 embryonic Kc167    60 embryonic S1    42 embryonic S3    70 leg disc CME L1    50 wing disc CME-W2    59 wing disc ML-DmD8    47 wing disc ML-DmD9    46 wing disc ML-DmD16-c3    35 wing disc ML-DmD21    82 wing disc ML-DmD32    50 haltere disc ML-DmD17-c3    54 eye-antennal disc ML-DmD11    65 antennal disc ML-DmD20-c5    61 mixed discs ML-DmD4-c1    47 CNS ML-DmBG1-c1    52 CNS ML-DmBG2-c2    41 tumorous blood cells mbn2    74 ovary fGS/OSS    27 ovary OSC    33 ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    177 Schneider line 2 Sg4    79 embryonic 1182-4H    52 embryonic GM2    58 embryonic Kc167    60 embryonic S1    42 embryonic S3    70 leg disc CME L1    50 wing disc CME-W2    59 wing disc ML-DmD8    47 wing disc ML-DmD9    46 wing disc ML-DmD16-c3    35 wing disc ML-DmD21    82 wing disc ML-DmD32    50 haltere disc ML-DmD17-c3    54 eye-antennal disc ML-DmD11    65 antennal disc ML-DmD20-c5    61 mixed discs ML-DmD4-c1    47 CNS ML-DmBG1-c1    52 CNS ML-DmBG2-c2    41 tumorous blood cells mbn2    74 ovary fGS/OSS    27 ovary OSC    33 ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    41 Cadmium 50 mM 6 hrs, larvae L3    55 Cadmium 50 mM 12 hrs, larvae L3    36 Cadmium 50 mM 48 hrs, 4-day adult    41 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    28 Copper 15 mM 48 hrs, 4-day adult    17 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    17 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    43 Caffeine 1.5 mg/ml 4 hrs, larvae L3    30 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    22 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    42 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult  (41) Cadmium 50 mM 6 hrs, larvae L3  (55) Cadmium 50 mM 12 hrs, larvae L3  (36) Cadmium 50 mM 48 hrs, 4-day adult  (41) Cadmium 100 mM 48 hrs, 4-day adult  (28) Copper 0.5 mM 12 hrs, larvae L3  (28) Copper 15 mM 48 hrs, 4-day adult    17 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    17 Ethanol 2.5% 3 hrs, larvae L3  (38) Ethanol 5% 3 hrs, larvae L3  (38) Ethanol 10% 3 hrs, larvae L3  (43) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (30) Caffeine 2.5 mg/ml 48 hrs, 4-day adult    22 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult  (38) Paraquat 10 mM 48 hrs, 4-day adult  (42) Rotenone 2 μg 12 hrs, larvae L3  (41) Rotenone 8 μg 12 hrs, larvae L3  (67) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    41 Cadmium 50 mM 6 hrs, larvae L3    55 Cadmium 50 mM 12 hrs, larvae L3    36 Cadmium 50 mM 48 hrs, 4-day adult    41 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    28 Copper 15 mM 48 hrs, 4-day adult    17 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    17 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    43 Caffeine 1.5 mg/ml 4 hrs, larvae L3    30 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    22 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    42 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    41 Cadmium 50 mM 6 hrs, larvae L3    55 Cadmium 50 mM 12 hrs, larvae L3    36 Cadmium 50 mM 48 hrs, 4-day adult    41 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    28 Copper 15 mM 48 hrs, 4-day adult    17 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    17 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    43 Caffeine 1.5 mg/ml 4 hrs, larvae L3    30 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    22 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    42 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    67 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    41 Cadmium 50 mM 6 hrs, larvae L3    55 Cadmium 50 mM 12 hrs, larvae L3    36 Cadmium 50 mM 48 hrs, 4-day adult    41 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    28 Copper 15 mM 48 hrs, 4-day adult    17 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    17 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    43 Caffeine 1.5 mg/ml 4 hrs, larvae L3    30 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    22 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    42 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult  (41) Cadmium 50 mM 6 hrs, larvae L3  (55) Cadmium 50 mM 12 hrs, larvae L3  (36) Cadmium 50 mM 48 hrs, 4-day adult  (41) Cadmium 100 mM 48 hrs, 4-day adult  28 Copper 0.5 mM 12 hrs, larvae L3  28 Copper 15 mM 48 hrs, 4-day adult    17 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    17 Ethanol 2.5% 3 hrs, larvae L3  (38) Ethanol 5% 3 hrs, larvae L3  (38) Ethanol 10% 3 hrs, larvae L3  (43) Caffeine 1.5 mg/ml 4 hrs, larvae L3  30 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    22 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult  (38) Paraquat 10 mM 48 hrs, 4-day adult  (42) Rotenone 2 μg 12 hrs, larvae L3  (41) Rotenone 8 μg 12 hrs, larvae L3  (67) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    41 Cadmium 50 mM 6 hrs, larvae L3    55 Cadmium 50 mM 12 hrs, larvae L3    36 Cadmium 50 mM 48 hrs, 4-day adult    41 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    28 Copper 15 mM 48 hrs, 4-day adult    17 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    17 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    43 Caffeine 1.5 mg/ml 4 hrs, larvae L3    30 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    22 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    42 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    41 Cadmium 50 mM 6 hrs, larvae L3    55 Cadmium 50 mM 12 hrs, larvae L3    36 Cadmium 50 mM 48 hrs, 4-day adult    41 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    28 Copper 15 mM 48 hrs, 4-day adult    17 Zinc 5 mM 12 hrs, larvae L3    20 Zinc 4.5 mM 48 hrs, 4-day adult    17 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    43 Caffeine 1.5 mg/ml 4 hrs, larvae L3    30 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    22 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    42 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (Graveley et al., 2011) mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	BDGP expression data • GM05135 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0064116 FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG33713 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Other Phenotypes Allele feeding behavior defective CG33713GS1189 smell perception defective CG33713GS1189 Phenotype manifest in Allele
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG33713 Class Mutagen Stocks Known lesion CG33713KG06423 P-element activity 1 Yes CG33713GS1189 amorphic allele - molecular evidence 0 Yes CG33713GG01681 0 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG33713 Class Mutagen Stocks Known lesion CG33713NIG.1704R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD8714} NA P{GD17479} NA P{GD17677} NA P{NIG.1704R} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}CG33713KG06423 NA insertion of mobile activating element P{GSV1}CG33714GS1189 NA P{Mae-UAS.6.11}CG33713GG01681 NA
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
fatty-acyl-CoA binding inferred from sequence or structural similarity with EMBL:U75273 (FlyBase Genome Annotators, 2002-2003)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	gene_with_dicistronic_mRNA (FlyBase Genome Annotators, 2002-2003) nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG33713 - Atx2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG33713 - Nmt experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting (Guruharsha et al., 2011, Mintseris et al., 2009.11.23) CG33713 - mRpL39 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG33713 - qkr58E-3 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG33713 - sds22 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG33713 allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0064116 DroID - A comprehensive database of gene and protein interactions. • FBgn0064116
Orthologs
OrthoDB Orthologs (34) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6RV3BS Dipteran inclusive ortholog search EOG6XPQR3 Insect inclusive ortholog search EOG6RXWWG Arthropod inclusive ortholog search EOG6WM39W Metazoa inclusive ortholog search EOG6MD8V0
Orthologs in Drosophila Species (EOG6RV3BS)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG33713     Drosophila simulans   Dsim\GD15501 Y   Drosophila sechellia   Dsec\GM22630 Y   Drosophila erecta   Dere\GG17546 Y   Drosophila yakuba   Dyak\GE15306 Y   Drosophila ananassae   Dana\GF21844 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA17261 Y   Drosophila persimilis   Dper\GL16573 Y   Drosophila willistoni   Dwil\GK16311 Y   Drosophila virilis   Dvir\GJ18782 Y   Drosophila mojavensis   Dmoj\GI14444 Y   Drosophila grimshawi   Dgri\GH12890 Y
Orthologs in non-Drosophila Dipterans (EOG6XPQR3)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL008309   Anopheles gambiae Malaria mosquito  Agam\AGAP000752   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ008477
Orthologs in non-Dipteran Insects (EOG6RXWWG)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\Ame.8863   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG007653   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH15731   Atta cephalotes Leafcutter ant  Acep\ACEP22425   Camponotus floridanus Florida carpenter ant  Cflo\CFLO12279   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL17742   Linepithema humile Argentine ant  Lhum\LH22832   Pogonomyrmex barbatus Red harvester ant  Pbar\PB19032   Solenopsis invicta Red fire ant  Sinv\SINV15692   Tribolium castaneum Red flour beetle  Tcas\TC002300
Orthologs in non-Insect Arthropods (EOG6WM39W)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Ixodes scapularis Deer tick  Isca\ISCW024286
Orthologs in non-Arthropod Metazoa (EOG6MD8V0)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\acbp-5   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_017561gn   Danio rerio Zebrafish  Drer\acbd6   Xenopus tropicalis Western clawed frog  Xtro\acbd6   Gallus gallus Domestic chicken  Ggal\ACBD6   Mus musculus House mouse  Mmus\ENSMUSG00000033701   Rattus norvegicus Norway rat  Rnor\Acbd6   Homo sapiens Human  Hsap\ACBD6
Human Orthologs (1)
Gene OMIM HGNC Hsap\ACBD6
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD15501 Drosophila sechellia Dsec\GM22630 Drosophila erecta Dere\GG17546 Drosophila yakuba Dyak\GE15306 Drosophila ananassae Dana\GF21844 Drosophila pseudoobscura pseudoobscura Dpse\GA17261 Drosophila persimilis Dper\GL16573 Drosophila willistoni Dwil\GK16311 Drosophila virilis Dvir\GJ18782 Drosophila mojavensis Dmoj\GI14444 Drosophila grimshawi Dgri\GH12890
Stocks & Reagents
Stocks Listed in FlyBase ( 1 )
Bloomington	14147 y1 P{SUPor-P}CG33713KG06423 CG33714KG06423
Genomic Clones ( 1 )
	BACR09F10 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 110 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GM05135 GM17572
Other clones	DPiM_GM05135
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT18842 GM23382 GM23435 GM28020 LD04906 LD12186 LP17807 LP21625 RE16511 RE30512 RH50308 RH67843
Other clones	44328 83524 153359 214573.51 280662 Dmel_dig_008501_0698_1225 Dmel_neb_013569_0378_2754 EK112608 EK159536 EK216912 EK257622 EK305022 EP17645 FGC020B07 FGC029E04 RC0-DA0008-130700-012-A07 RP003018008 RP003018825 RP003019764 RP003021123 RP003034522 RP003048395 RP003072836 RP003077561 RP003080868 RP003089291 RP003094593 RP003102013 RP003112368 RP003115755 RP003117361 RP003117555 RP003133467 RP003144986 RP003152559 RP003157119 RP003165528 RP003172737 RP003189178 RP003206565 RP003206906 RP003212268 RP003240259 RP003248451 RP003260456 RP003271975 RP003277477 RP003285845 RP003286827 RP003295813 RP003307958 RP003309356 RP003312254 RP003312715 RP003314348 RP003316066 RP003317944 RP003325261 RP003329573 RP003332717 RP003340617 RP003344758 RP003345025 RP003389728 RP003400279 RP003438182 RP003440470 RP003448986 RP003452214 RP003460629 RP003465895 RP003476993 RP003477588 RP003479763 RP003480493 RP003480922 RP003490818 RP003497771 RP003499190 RP003503877 RP003530057 RP003538239 RP003538594 RP003546198 RP003550823 RP003571134 RP003580842 RP003583739 RP003604342 RP003606854 RP003609539 RP003624544 RP003635756 RP003640670 RP003668851
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0064116 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 3771728
Antibody Information
	polyclonal (Ryuda et al., 2011)
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments	Dicistronic annotation CG33071 split out into separate annotations for each open reading frame, CG33714 and CG33713, in release 4.2 of the genome annotation. (FlyBase Genome Annotators, 2005) One or more of the processed transcripts for this gene contain(s) two non-overlapping open reading frames (ORFs). The non-overlapping ORFs are represented by CG33714 and CG33713. (FlyBase Genome Annotators, 2002-2003)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_001031914 NM_001031915 RefSeq (Proteins) • NP_001027085 NP_001027086 DDBJ / EMBL / GenBank • AA696136 AAF50834 AAF50834.2 AAL28451 AAN09671 AAN09671.1 AAN09672.1 AAN09673.1 AW941244 AY060903 BH840676 Entrez Gene - A searchable database of RefSeq genes. • 3771728 UniProtKB/TrEMBL • Q9VRG6
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Acyl-CoA-binding protein, ACBP (IPR000582) Ankyrin repeat (IPR002110) FERM/acyl-CoA-binding protein, 3-helical bundle (IPR014352) Ankyrin repeat-containing domain (IPR020683) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • GM05135
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0064116 DroID - A comprehensive database of gene and protein interactions. • FBgn0064116 DRSC - Results from RNAi screens. • FBgn0064116 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0064116 FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0064116 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 3771728 modMine - Data generated by the modENCODE project. • FBgn0064116
Synonyms & Secondary IDs ( 7 )
Reported As
Symbol Synonym	cg1704 (Lasko, 2000) CG1704 (Liu et al., 2011) CG33071 (Giot et al., 2003, Peng et al., 2007, Ryuda et al., 2008) CG33071-ORFB   CG33071ORFB (Hayden and Bosco, 2008) CG33713 (Hayden and Bosco, 2008, Ryuda et al., 2008, Japanese National Institute of Genetics, 2012.5.21) Dromel_CG33713_FBtr0091704_mORF (Hayden and Bosco, 2008)
Name Synonym
Secondary FlyBase IDs
	FBgn0031172 FBgn0053071 FBgn0053713 FBpp0076923 FBpp0076925 FBtr0077228 FBtr0077230
References ( 21 )
Generate a list of	All references relating to this gene ( 21 )
List References by type	Research paper  ( 6 ) Supplementary material  ( 4 ) Personal communication to FlyBase  ( 3 ) FlyBase analysis  ( 4 ) Stock list  ( 1 ) Website  ( 1 ) Curated genome annotation  ( 1 )
Recent research papers ( 2 )
	Liu et al., 2011, Dev. Growth Differ. 53(6): 822--841 Negative modulation of bone morphogenetic protein signaling by Dullard during wing vein formation in Drosophila. [FBrf0214664] Ryuda et al., 2011, J. Biol. Chem. 286(44): 38417--38426 Identification of a Novel Gene, Anorexia, Regulating Feeding Activity via Insulin Signaling in Drosophila melanogaster. [FBrf0216494] Show all research papers ...