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Gene Dmel\BG642163

General Information
Symbol	Dmel\BG642163	Species	D. melanogaster
Name	BG642163	Annotation symbol	CG34102
Feature type	protein_coding_gene	FlyBase ID	FBgn0083938
Gene Model Status	Current	Stock availability	None publicly available
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	25A2-25A2	Sequence location	2L:4,641,296..4,642,747 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene BG642163 is referred to in FlyBase by the symbol Dmel\BG642163 (CG34102, FBgn0083938). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: multicellular organism reproduction. 2 alleles are reported. The phenotype of these alleles is annotated with: trichogen cell. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected. Peak expression observed in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult male accessory gland. Comments on Affy2 ProbeSet: ProbeSet 1640506_at partially aligns to an exonic region of the only FlyBase-annotated transcript isoform of BG642163: 10 out of 12 probes fall into this exonic region. Gene sequence location is 2L:4641296..4642747.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 25A2-25A2
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\BG642163 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) BG642163-RA FBtr0110769  NM_001042866   1394   415
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein BG642163-PA   FBpp0110065   43.9   415   9.35     NP_001036331   ABI31286
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014134 ABI31286   BT032979   BT032992   BT032997
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q3HKQ0
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
extracellular space inferred from direct assay (Findlay et al., 2009)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult male accessory gland. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    6.525 Larval Midgut    13.8 Larval Hindgut    6.4 Larval Malpighian Tubules    10.7 Larval Fat Body    11.1 Larval Salivary Gland    5.6 Larval Trachea    1.675 Larval Carcass    10.75 Adult Head    6.7 Adult Eye    0.75 Adult Brain    6 Adult Thoracic-Abdominal Ganglion    7.6 Adult Crop    16.4 Adult Midgut    9 Adult Hindgut    13.8 Adult Malpighian Tubules    7.2 Adult Fat Body    7.4 Adult Salivary Gland    13.3 Adult Heart    2.825 Adult VirginFemale Spermatheca    8.1 Adult InseminatedFemale Spermatheca    8.5 Adult Ovary    2.1 Adult Testis    15.1 Adult Male Accessory Gland    6790.5 Adult Carcass    18.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    6.525 Larval Midgut    13.8 Larval Hindgut    6.4 Larval Malpighian Tubules    10.7 Larval Fat Body    11.1 Larval Salivary Gland    5.6 Larval Trachea    1.675 Larval Carcass    10.75 Adult Head    6.7 Adult Eye    0.75 Adult Brain    6 Adult Thoracic-Abdominal Ganglion    7.6 Adult Crop    16.4 Adult Midgut    9 Adult Hindgut    13.8 Adult Malpighian Tubules    7.2 Adult Fat Body    7.4 Adult Salivary Gland    13.3 Adult Heart    2.825 Adult VirginFemale Spermatheca    8.1 Adult InseminatedFemale Spermatheca    8.5 Adult Ovary    2.1 Adult Testis    15.1 Adult Male Accessory Gland  (6790.5) Adult Carcass    18.6 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    6.525 Larval Midgut    13.8 Larval Hindgut    6.4 Larval Malpighian Tubules    10.7 Larval Fat Body    11.1 Larval Salivary Gland    5.6 Larval Trachea    1.675 Larval Carcass    10.75 Adult Head    6.7 Adult Eye    0.75 Adult Brain    6 Adult Thoracic-Abdominal Ganglion    7.6 Adult Crop    16.4 Adult Midgut    9 Adult Hindgut    13.8 Adult Malpighian Tubules    7.2 Adult Fat Body    7.4 Adult Salivary Gland    13.3 Adult Heart    2.825 Adult VirginFemale Spermatheca    8.1 Adult InseminatedFemale Spermatheca    8.5 Adult Ovary    2.1 Adult Testis    15.1 Adult Male Accessory Gland  (6790.5) Adult Carcass    18.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    6.525 Larval Midgut    13.8 Larval Hindgut    6.4 Larval Malpighian Tubules    10.7 Larval Fat Body    11.1 Larval Salivary Gland    5.6 Larval Trachea    1.675 Larval Carcass    10.75 Adult Head    6.7 Adult Eye    0.75 Adult Brain    6 Adult Thoracic-Abdominal Ganglion    7.6 Adult Crop    16.4 Adult Midgut    9 Adult Hindgut    13.8 Adult Malpighian Tubules    7.2 Adult Fat Body    7.4 Adult Salivary Gland    13.3 Adult Heart    2.825 Adult VirginFemale Spermatheca    8.1 Adult InseminatedFemale Spermatheca    8.5 Adult Ovary    2.1 Adult Testis    15.1 Adult Male Accessory Gland    6790.5 Adult Carcass    18.6 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    6.525 Larval Midgut    13.8 Larval Hindgut    6.4 Larval Malpighian Tubules    10.7 Larval Fat Body    11.1 Larval Salivary Gland    5.6 Larval Trachea    1.675 Larval Carcass    10.75 Adult Head    6.7 Adult Eye    0.75 Adult Brain    6 Adult Thoracic-Abdominal Ganglion    7.6 Adult Crop    16.4 Adult Midgut    9 Adult Hindgut    13.8 Adult Malpighian Tubules    7.2 Adult Fat Body    7.4 Adult Salivary Gland    13.3 Adult Heart    2.825 Adult VirginFemale Spermatheca    8.1 Adult InseminatedFemale Spermatheca    8.5 Adult Ovary    2.1 Adult Testis    15.1 Adult Male Accessory Gland    6790.5 Adult Carcass    18.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    6.525 Larval Midgut    13.8 Larval Hindgut    6.4 Larval Malpighian Tubules    10.7 Larval Fat Body    11.1 Larval Salivary Gland    5.6 Larval Trachea    1.675 Larval Carcass    10.75 Adult Head    6.7 Adult Eye    0.75 Adult Brain    6 Adult Thoracic-Abdominal Ganglion    7.6 Adult Crop    16.4 Adult Midgut    9 Adult Hindgut    13.8 Adult Malpighian Tubules    7.2 Adult Fat Body    7.4 Adult Salivary Gland    13.3 Adult Heart    2.825 Adult VirginFemale Spermatheca    8.1 Adult InseminatedFemale Spermatheca    8.5 Adult Ovary    2.1 Adult Testis    15.1 Adult Male Accessory Gland  (6790.5) Adult Carcass    18.6 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    6.525 Larval Midgut    13.8 Larval Hindgut    6.4 Larval Malpighian Tubules    10.7 Larval Fat Body    11.1 Larval Salivary Gland    5.6 Larval Trachea    1.675 Larval Carcass    10.75 Adult Head    6.7 Adult Eye    0.75 Adult Brain    6 Adult Thoracic-Abdominal Ganglion    7.6 Adult Crop    16.4 Adult Midgut    9 Adult Hindgut    13.8 Adult Malpighian Tubules    7.2 Adult Fat Body    7.4 Adult Salivary Gland    13.3 Adult Heart    2.825 Adult VirginFemale Spermatheca    8.1 Adult InseminatedFemale Spermatheca    8.5 Adult Ovary    2.1 Adult Testis    15.1 Adult Male Accessory Gland  (6790.5) Adult Carcass    18.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    6.525 Larval Midgut    13.8 Larval Hindgut    6.4 Larval Malpighian Tubules    10.7 Larval Fat Body    11.1 Larval Salivary Gland    5.6 Larval Trachea    1.675 Larval Carcass    10.75 Adult Head    6.7 Adult Eye    0.75 Adult Brain    6 Adult Thoracic-Abdominal Ganglion    7.6 Adult Crop    16.4 Adult Midgut    9 Adult Hindgut    13.8 Adult Malpighian Tubules    7.2 Adult Fat Body    7.4 Adult Salivary Gland    13.3 Adult Heart    2.825 Adult VirginFemale Spermatheca    8.1 Adult InseminatedFemale Spermatheca    8.5 Adult Ovary    2.1 Adult Testis    15.1 Adult Male Accessory Gland    6790.5 Adult Carcass    18.6 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    6.7   NA  Eye    0.75   NA  Brain    6   6.525  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    7.6   NA  Crop    no informative data   no informative data  Midgut    9   6.4  Hindgut    no informative data   no informative data  Malpighian Tubules    7.2   no informative data  Fat Body    7.4   5.6  Salivary Gland    no informative data   NA  Heart    2.825   1.675  Trachea    NA   NA  VirginFemale Spermatheca    8.1   NA  InseminatedFemale Spermatheca    8.5   NA  Ovary    2.1   NA  Testis    no informative data   NA  Male Accessory Gland    6790.5   no informative data  Carcass    no informative data FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    46 digestive system, 4-day adult    40 digestive system, 20-day adult    10 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    13 carcass, 4-day adult    16 carcass, 20-day adult    26 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    292 accessory gland, mated 4-day male    5376 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult  (46) digestive system, 4-day adult  (40) digestive system, 20-day adult    10 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    13 carcass, 4-day adult    16 carcass, 20-day adult  26 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male  (292) accessory gland, mated 4-day male  (5376) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    46 digestive system, 4-day adult    40 digestive system, 20-day adult    10 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    13 carcass, 4-day adult    16 carcass, 20-day adult    26 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male  (292) accessory gland, mated 4-day male  (5376) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    46 digestive system, 4-day adult    40 digestive system, 20-day adult    10 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    13 carcass, 4-day adult    16 carcass, 20-day adult    26 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    292 accessory gland, mated 4-day male    5376 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    46 digestive system, 4-day adult    40 digestive system, 20-day adult    10 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    13 carcass, 4-day adult    16 carcass, 20-day adult    26 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    292 accessory gland, mated 4-day male    5376 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult  (46) digestive system, 4-day adult  (40) digestive system, 20-day adult    10 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    13 carcass, 4-day adult    16 carcass, 20-day adult  26 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male  (292) accessory gland, mated 4-day male  (5376) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    46 digestive system, 4-day adult    40 digestive system, 20-day adult    10 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    13 carcass, 4-day adult    16 carcass, 20-day adult    26 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male  (292) accessory gland, mated 4-day male  (5376) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    46 digestive system, 4-day adult    40 digestive system, 20-day adult    10 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    13 carcass, 4-day adult    16 carcass, 20-day adult    26 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    292 accessory gland, mated 4-day male    5376 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected. Peak expression observed in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    16 adult male 01day    128 adult male 05day    168 adult male 30day    116 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    16 adult male 01day  (128) adult male 05day  (168) adult male 30day  (116) adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    16 adult male 01day  (128) adult male 05day  (168) adult male 30day  (116) adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    16 adult male 01day    128 adult male 05day    168 adult male 30day    116 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    16 adult male 01day    128 adult male 05day    168 adult male 30day    116 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    16 adult male 01day  (128) adult male 05day  (168) adult male 30day  (116) adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    16 adult male 01day  128 adult male 05day  (168) adult male 30day  116 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    0 embryo 22-24hr    0 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    16 adult male 01day    128 adult male 05day    168 adult male 30day    116 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    31 cold shock, 4-day adult    35 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    0 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    8 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    24 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult    133 Ethanol 2.5% 3 hrs, larvae L3    60 Ethanol 5% 3 hrs, larvae L3    0 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    0 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    43 Paraquat 5 mM 48 hrs, 4-day adult    134 Paraquat 10 mM 48 hrs, 4-day adult    70 Rotenone 2 μg 12 hrs, larvae L3    0 Rotenone 8 μg 12 hrs, larvae L3    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (31) cold shock, 4-day adult  (35) heat shock, 4-day adult  (45) Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    0 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    8 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    24 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult  (133) Ethanol 2.5% 3 hrs, larvae L3  (60) Ethanol 5% 3 hrs, larvae L3    0 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    0 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult  (43) Paraquat 5 mM 48 hrs, 4-day adult  (134) Paraquat 10 mM 48 hrs, 4-day adult  (70) Rotenone 2 μg 12 hrs, larvae L3    0 Rotenone 8 μg 12 hrs, larvae L3    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    31 cold shock, 4-day adult    35 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    0 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    8 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    24 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult  (133) Ethanol 2.5% 3 hrs, larvae L3    60 Ethanol 5% 3 hrs, larvae L3    0 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    0 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    43 Paraquat 5 mM 48 hrs, 4-day adult  (134) Paraquat 10 mM 48 hrs, 4-day adult    70 Rotenone 2 μg 12 hrs, larvae L3    0 Rotenone 8 μg 12 hrs, larvae L3    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    31 cold shock, 4-day adult    35 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    0 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    8 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    24 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult    133 Ethanol 2.5% 3 hrs, larvae L3    60 Ethanol 5% 3 hrs, larvae L3    0 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    0 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    43 Paraquat 5 mM 48 hrs, 4-day adult    134 Paraquat 10 mM 48 hrs, 4-day adult    70 Rotenone 2 μg 12 hrs, larvae L3    0 Rotenone 8 μg 12 hrs, larvae L3    0 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    31 cold shock, 4-day adult    35 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    0 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    8 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    24 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult    133 Ethanol 2.5% 3 hrs, larvae L3    60 Ethanol 5% 3 hrs, larvae L3    0 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    0 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    43 Paraquat 5 mM 48 hrs, 4-day adult    134 Paraquat 10 mM 48 hrs, 4-day adult    70 Rotenone 2 μg 12 hrs, larvae L3    0 Rotenone 8 μg 12 hrs, larvae L3    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  31 cold shock, 4-day adult  (35) heat shock, 4-day adult  (45) Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    0 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    8 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    24 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult  (133) Ethanol 2.5% 3 hrs, larvae L3  (60) Ethanol 5% 3 hrs, larvae L3    0 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    0 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult  (43) Paraquat 5 mM 48 hrs, 4-day adult  (134) Paraquat 10 mM 48 hrs, 4-day adult  (70) Rotenone 2 μg 12 hrs, larvae L3    0 Rotenone 8 μg 12 hrs, larvae L3    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    31 cold shock, 4-day adult    35 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    0 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    8 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    24 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult  133 Ethanol 2.5% 3 hrs, larvae L3    60 Ethanol 5% 3 hrs, larvae L3    0 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    0 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    43 Paraquat 5 mM 48 hrs, 4-day adult  134 Paraquat 10 mM 48 hrs, 4-day adult    70 Rotenone 2 μg 12 hrs, larvae L3    0 Rotenone 8 μg 12 hrs, larvae L3    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    31 cold shock, 4-day adult    35 heat shock, 4-day adult    45 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    0 Cadmium 50 mM 48 hrs, 4-day adult    4 Cadmium 100 mM 48 hrs, 4-day adult    8 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    24 Zinc 5 mM 12 hrs, larvae L3    0 Zinc 4.5 mM 48 hrs, 4-day adult    133 Ethanol 2.5% 3 hrs, larvae L3    60 Ethanol 5% 3 hrs, larvae L3    0 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    0 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    43 Paraquat 5 mM 48 hrs, 4-day adult    134 Paraquat 10 mM 48 hrs, 4-day adult    70 Rotenone 2 μg 12 hrs, larvae L3    0 Rotenone 8 μg 12 hrs, larvae L3    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (Graveley et al., 2011) mE1_20_mRNA_expression_cluster_20
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0083938 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CT35796
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele partially lethal - majority die | pupal stage, with Scer\GAL4pnr-MD237 BG642163GD15123 viable, with Scer\GAL4pnr-MD237 BG642163GD12459 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 BG642163GD12459 Phenotype manifest in Allele trichogen cell, with Scer\GAL4pnr-MD237 BG642163GD12459
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of BG642163 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of BG642163 Class Mutagen Stocks Known lesion BG642163GD12459 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes BG642163GD15123 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data characterization construct P{GD12459} NA P{GD15123} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
	There is no information supporting a molecular function term for this gene. (Based on a review of available data on: 2012-02-20)
Terms Based on Experimental Evidence ( 2 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
multicellular organism reproduction inferred from expression pattern (Findlay et al., 2009, Mueller et al., 2005)
Cellular Component
CV term Evidence References
extracellular space inferred from direct assay (Findlay et al., 2009)
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
extracellular space inferred from sequence model (Mueller et al., 2005)
Sequence Ontology: Class of Gene
	nuclear_gene (FlyBase Genome Annotators, 2006) protein_coding_gene (FlyBase Genome Annotators, 2006)
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions BG642163 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0083938
Orthologs
OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search No orthologs identified Dipteran inclusive ortholog search No orthologs identified Insect inclusive ortholog search No orthologs identified Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (None identified)
No orthologies identified
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
Stocks & Reagents
Stocks Listed in FlyBase ( 0 )
Genomic Clones ( 2 )
	BACR04C12 BACR37J18 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 3 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones	IP21419 IP21619 IP21719
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0083938 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 4379888
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments	Release 2 annotation CG11933 (which was eliminated in release 3 of the genome annotation) overlaps the same region of the genome, on the same strand, as release 5.1 annotation CG34102, but in a different frame. (FlyBase Genome Annotators, 2006)
Other Comments
	New annotation (CG34102) in release 5.1 of the genome annotation. (FlyBase Genome Annotators, 2006)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_001042866 RefSeq (Proteins) • NP_001036331 DDBJ / EMBL / GenBank • ABI31286 Entrez Gene - A searchable database of RefSeq genes. • 4379888 UniProtKB/TrEMBL • Q3HKQ0
Other Crossreferences
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0083938 DRSC - Results from RNAi screens. • FBgn0083938 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0083938 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CT35796 FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0083938 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 4379888 modMine - Data generated by the modENCODE project. • FBgn0083938
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	BG642163 (Ravi Ram and Wolfner, 2007) BG642163(1a3) (Mueller et al., 2005) CG34102 (FlyBase Genome Annotators, 2006, Takemori and Yamamoto, 2009, Findlay et al., 2009)
Name Synonym	BG642163   CG34102 (Takemori and Yamamoto, 2009)
Secondary FlyBase IDs
References ( 9 )
Research paper	Takemori and Yamamoto, 2009, Proteomics 9(9): 2484--2493 Proteome mapping of the Drosophila melanogaster male reproductive system. [FBrf0208046] Mueller et al., 2005, Genetics 171(1): 131--143 Cross-species comparison of Drosophila male accessory gland protein genes. [FBrf0187652]
Supplementary material	Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] Findlay et al., 2009, Genome Res. 19(5): Supplemental Material. [FBrf0208111] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Ravi Ram and Wolfner, 2007, Integr. Comp. Biol. 47(3): Supplementary Material. [FBrf0219931]
FlyBase analysis	FlyBase Curators, 2010-, Gene Ontology (GO) annotation review. Gene Ontology (GO) annotation review. [FBrf0216433] FlyBase Genome Annotators, 2006, Changes affecting gene model number or type in release 5.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 5.1 of the annotated D.melanogaster genome. [FBrf0191550] FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398]