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Gene Dmel\CG34126

General Information
Symbol	Dmel\CG34126	Species	D. melanogaster
Name		Annotation symbol	CG34126
Feature type	protein_coding_gene	FlyBase ID	FBgn0083962
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	25B5-25B9	Sequence location	2L:4,981,646..4,992,436 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG34126 (FBgn0083962). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: nucleotide binding. The biological processes in which it is involved are not known. 5 alleles are reported. The phenotype of these alleles is annotated with: trichogen cell. It has one annotated transcript and one annotated polypeptide. Protein features are: Cytochrome c region; DNA binding domain, putative; Homeodomain-like. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Gene sequence location is 2L:4981646..4992436.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN28307 HFA02726 BKN25807
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 25B5-25B9
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG34126 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Conservation across Drosophila species: gene merge triggered by species conservation data, conserved coding exon found between the two genes, supported by BlastX and gene prediction. Gene merge based on protein alignment (BLASTX) data.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG34126-RB FBtr0290010  NM_001042870   5714   1501
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG34126-PB   FBpp0288449   164.5   1501   6.54     NP_001036335   AAN10518
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Homeodomain-like (IPR009057) DNA binding domain, putative (IPR009061) Cytochrome c region (IPR012282)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA140657   AA140658   AA802979   AE014134 AAN10518   AI294686   BI639559   BT030849   BT120376   CK662021   CO153416   CO186548   CO186549   CO276487   CO278465   CO286852   CO289991   CO290365   CO305284   CO333930   CO337749   CO343857   CO343860   EC070663   EC071666   EC080230   EC082046   EC207075   EC207792   EC232153   EC233186   EC239910   EC240735   EC249138   EC250356   EC259624   EC260656   EC263651   EC267957   EL885546   EL885547   EV578717   EV580523   EY198915
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8IPL3
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0083962    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0083962 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0083962 expression level Developmental Stage   Expression Level embryo 00-02hr    2255 embryo 02-04hr    418 embryo 04-06hr    362 embryo 06-08hr    674 embryo 08-10hr    732 embryo 10-12hr    577 embryo 12-14hr    728 embryo 14-16hr    909 embryo 16-18hr    797 embryo 18-20hr    768 embryo 20-22hr    612 embryo 22-24hr    673 larva L1    663 larva L2    556 larva L3 12hr old    545 larva L3 puffstage 1-2    663 larva L3 puffstage 3-6    1207 larva L3 puffstage 7-9    1322 white prepupae new    1358 white prepupae 12hr    1171 white prepupae 24hr    1317 pupae 2d postWPP    1234 pupae 3d postWPP    961 pupae 4d postWPP    713 adult male 01day    1147 adult male 05day    1185 adult male 30day    1325 adult female 01day    1575 adult female 05day    2041 adult female 30day    1999 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (2255) embryo 02-04hr  (418) embryo 04-06hr  (362) embryo 06-08hr  (674) embryo 08-10hr  (732) embryo 10-12hr  (577) embryo 12-14hr  (728) embryo 14-16hr  (909) embryo 16-18hr  (797) embryo 18-20hr  (768) embryo 20-22hr  (612) embryo 22-24hr  (673) larva L1  (663) larva L2  (556) larva L3 12hr old  (545) larva L3 puffstage 1-2  (663) larva L3 puffstage 3-6  (1207) larva L3 puffstage 7-9  (1322) white prepupae new  (1358) white prepupae 12hr  (1171) white prepupae 24hr  (1317) pupae 2d postWPP  (1234) pupae 3d postWPP  (961) pupae 4d postWPP  (713) adult male 01day  (1147) adult male 05day  (1185) adult male 30day  (1325) adult female 01day  (1575) adult female 05day  (2041) adult female 30day  (1999) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (2255) embryo 02-04hr    418 embryo 04-06hr    362 embryo 06-08hr    674 embryo 08-10hr    732 embryo 10-12hr    577 embryo 12-14hr    728 embryo 14-16hr    909 embryo 16-18hr    797 embryo 18-20hr    768 embryo 20-22hr    612 embryo 22-24hr    673 larva L1    663 larva L2    556 larva L3 12hr old    545 larva L3 puffstage 1-2    663 larva L3 puffstage 3-6    1207 larva L3 puffstage 7-9    1322 white prepupae new    1358 white prepupae 12hr    1171 white prepupae 24hr    1317 pupae 2d postWPP    1234 pupae 3d postWPP    961 pupae 4d postWPP    713 adult male 01day    1147 adult male 05day    1185 adult male 30day    1325 adult female 01day  (1575) adult female 05day  (2041) adult female 30day  (1999) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    2255 embryo 02-04hr    418 embryo 04-06hr    362 embryo 06-08hr    674 embryo 08-10hr    732 embryo 10-12hr    577 embryo 12-14hr    728 embryo 14-16hr    909 embryo 16-18hr    797 embryo 18-20hr    768 embryo 20-22hr    612 embryo 22-24hr    673 larva L1    663 larva L2    556 larva L3 12hr old    545 larva L3 puffstage 1-2    663 larva L3 puffstage 3-6    1207 larva L3 puffstage 7-9    1322 white prepupae new    1358 white prepupae 12hr    1171 white prepupae 24hr    1317 pupae 2d postWPP    1234 pupae 3d postWPP    961 pupae 4d postWPP    713 adult male 01day    1147 adult male 05day    1185 adult male 30day    1325 adult female 01day    1575 adult female 05day    2041 adult female 30day    1999 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    2255 embryo 02-04hr    418 embryo 04-06hr    362 embryo 06-08hr    674 embryo 08-10hr    732 embryo 10-12hr    577 embryo 12-14hr    728 embryo 14-16hr    909 embryo 16-18hr    797 embryo 18-20hr    768 embryo 20-22hr    612 embryo 22-24hr    673 larva L1    663 larva L2    556 larva L3 12hr old    545 larva L3 puffstage 1-2    663 larva L3 puffstage 3-6    1207 larva L3 puffstage 7-9    1322 white prepupae new    1358 white prepupae 12hr    1171 white prepupae 24hr    1317 pupae 2d postWPP    1234 pupae 3d postWPP    961 pupae 4d postWPP    713 adult male 01day    1147 adult male 05day    1185 adult male 30day    1325 adult female 01day    1575 adult female 05day    2041 adult female 30day    1999 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0083962 expression level Developmental Stage   Expression Level embryo 00-02hr    2255 embryo 02-04hr    418 embryo 04-06hr    362 embryo 06-08hr    674 embryo 08-10hr    732 embryo 10-12hr    577 embryo 12-14hr    728 embryo 14-16hr    909 embryo 16-18hr    797 embryo 18-20hr    768 embryo 20-22hr    612 embryo 22-24hr    673 larva L1    663 larva L2    556 larva L3 12hr old    545 larva L3 puffstage 1-2    663 larva L3 puffstage 3-6    1207 larva L3 puffstage 7-9    1322 white prepupae new    1358 white prepupae 12hr    1171 white prepupae 24hr    1317 pupae 2d postWPP    1234 pupae 3d postWPP    961 pupae 4d postWPP    713 adult male 01day    1147 adult male 05day    1185 adult male 30day    1325 adult female 01day    1575 adult female 05day    2041 adult female 30day    1999 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (2255) embryo 02-04hr  (418) embryo 04-06hr  (362) embryo 06-08hr  (674) embryo 08-10hr  (732) embryo 10-12hr  (577) embryo 12-14hr  (728) embryo 14-16hr  (909) embryo 16-18hr  (797) embryo 18-20hr  (768) embryo 20-22hr  (612) embryo 22-24hr  (673) larva L1  (663) larva L2  (556) larva L3 12hr old  (545) larva L3 puffstage 1-2  (663) larva L3 puffstage 3-6  (1207) larva L3 puffstage 7-9  (1322) white prepupae new  (1358) white prepupae 12hr  (1171) white prepupae 24hr  (1317) pupae 2d postWPP  (1234) pupae 3d postWPP  (961) pupae 4d postWPP  (713) adult male 01day  (1147) adult male 05day  (1185) adult male 30day  (1325) adult female 01day  (1575) adult female 05day  (2041) adult female 30day  (1999) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  2255 embryo 02-04hr    418 embryo 04-06hr    362 embryo 06-08hr    674 embryo 08-10hr    732 embryo 10-12hr    577 embryo 12-14hr    728 embryo 14-16hr    909 embryo 16-18hr    797 embryo 18-20hr    768 embryo 20-22hr    612 embryo 22-24hr    673 larva L1    663 larva L2    556 larva L3 12hr old    545 larva L3 puffstage 1-2    663 larva L3 puffstage 3-6    1207 larva L3 puffstage 7-9    1322 white prepupae new    1358 white prepupae 12hr    1171 white prepupae 24hr    1317 pupae 2d postWPP    1234 pupae 3d postWPP    961 pupae 4d postWPP    713 adult male 01day    1147 adult male 05day    1185 adult male 30day    1325 adult female 01day  1575 adult female 05day  2041 adult female 30day  1999 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    2255 embryo 02-04hr    418 embryo 04-06hr    362 embryo 06-08hr    674 embryo 08-10hr    732 embryo 10-12hr    577 embryo 12-14hr    728 embryo 14-16hr    909 embryo 16-18hr    797 embryo 18-20hr    768 embryo 20-22hr    612 embryo 22-24hr    673 larva L1    663 larva L2    556 larva L3 12hr old    545 larva L3 puffstage 1-2    663 larva L3 puffstage 3-6    1207 larva L3 puffstage 7-9    1322 white prepupae new    1358 white prepupae 12hr    1171 white prepupae 24hr    1317 pupae 2d postWPP    1234 pupae 3d postWPP    961 pupae 4d postWPP    713 adult male 01day    1147 adult male 05day    1185 adult male 30day    1325 adult female 01day    1575 adult female 05day    2041 adult female 30day    1999 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    2255 embryo 02-04hr    418 embryo 04-06hr    362 embryo 06-08hr    674 embryo 08-10hr    732 embryo 10-12hr    577 embryo 12-14hr    728 embryo 14-16hr    909 embryo 16-18hr    797 embryo 18-20hr    768 embryo 20-22hr    612 embryo 22-24hr    673 larva L1    663 larva L2    556 larva L3 12hr old    545 larva L3 puffstage 1-2    663 larva L3 puffstage 3-6    1207 larva L3 puffstage 7-9    1322 white prepupae new    1358 white prepupae 12hr    1171 white prepupae 24hr    1317 pupae 2d postWPP    1234 pupae 3d postWPP    961 pupae 4d postWPP    713 adult male 01day    1147 adult male 05day    1185 adult male 30day    1325 adult female 01day    1575 adult female 05day    2041 adult female 30day    1999 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0083962    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0083962 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Heatmap Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass     Adult Head no informative data Adult Eye no informative data Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut     Adult Hindgut no informative data Adult Malpighian Tubules     Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary no informative data Adult Testis     Adult Male Accessory Gland no informative data Adult Carcass no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_02
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0083962 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31653-RA;CG3805-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG34126f05168 viable, with Scer\GAL4pnr-MD237 CG34126GD10320 CG34126GD11162 Sterility Allele fertile CG34126f05168 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG34126GD11162 Phenotype manifest in Allele trichogen cell, with Scer\GAL4pnr-MD237 CG34126GD11162
Classical Alleles ( 2 )
For All Classical Alleles Show
Allele of CG34126 Class Mutagen Stocks Known lesion CG34126f05168 piggyBac transposase 1 -- CG34126MB06705 1 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG34126 Class Mutagen Stocks Known lesion CG34126GD11162 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG34126GD10320 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG34126KK108307 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel8013 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD10320} NA P{GD11162} NA P{KK108307} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{WH}CG34126f05168 NA insertion of mobile activating element P{GSV1}C575C575 NA insertion of enhancer trap binary system Mi{ET1}CG34126MB06705 No
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
	There is no information supporting a biological process or cellular component term for this gene. (Based on a review of available data before: 2006)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
nucleotide binding inferred from electronic annotation with InterPro:IPR009061 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG34126 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0083962
Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs	Dpse\GA17697
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AGAP008379-PA Anopheles gambiae (mosquito) XP_392165.3 Apis mellifera (honey bee) XP_001944744.1 Acyrthosiphon pisum (pea aphid) 90549 Branchiostoma floridae (lancelet) BGIBMGA009279-PA Bombyx mori (silk worm) ENSBTAP00000007936 Bos taurus (bovine) CN07774 Caenorhabditis brenneri (small nematode) CBP34820 Caenorhabditis briggsae (nematode) CE28285 Caenorhabditis elegans (worm) ENSCAFP00000009998 Canis familiaris (dog) ENSCINP00000016170 Ciona intestinalis (sea squirt) CPIJ001735 Culex pipens (mosquito) ENSCPOP00000008421 Cavia porcellus (guinea pig) RP28511 Caenorhabditis remanei (nematode) ENSCSAVP00000015730 Ciona savignyi (sedentary tunicate) 105822 Capitella spl (polychaete worm) DDB0205028 Dictyostelium discoideum (amoeba) 318097 Daphnia pulex (daphnia) ENSDARP00000046870 Danio rerio (zebra fish) ENSECAP00000002815 Equus caballus (horse) ENSGACP00000026222 Gymnopilus aculeatus (mushroom) ENSGALP00000018826 Gallus gallus (chicken) ENSP00000279907 Homo sapiens (human) ENSMODP00000006382 Monodelphis domestica (gray opossum) ENSMMUP00000031074 Macaca mulatta (rhesus monkey) ENSMUSP00000020112 Mus musculus (house mouse) XP_001601171.1 Nasonia vitripennis (wasp) ENSOANP00000008887 Ornithorynchus anatinus (platypus) ENSORLP00000019458 Oryzias latipes (japanese killifish) PHUM001685-PA Pediculus humanus (human body louse) ENSPPYP00000018474 Pongo pygmaeus (orangutan) ENSPTRP00000009078 Pan troglodytes (chimpanzee) ENSRNOP00000000588 Rattus norvegicus (norway rat) Smp_141600 Schistosoma mansoni (trematode parasite) XP_001194291.1 Strongylocentrotus purpuratus (purple sea urchin) XP_973878.2 Tribolium castaneum (red flour beetle) ENSTNIP00000014370 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000032799 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000049121 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB16112 NV20848 NV15814 LH22013 ISCW013299 FBgn0229102 FBgn0226560 FBgn0204654 FBgn0194702 FBgn0173419 FBgn0250332 JGI_V11_318097 FBgn0164122 FBgn0144224 FBgn0120555 FBgn0117167 FBgn0092732 CPIJ001735 BGIBMGA009279 ACYPI007192 GB17882 AGAP008379 AAEL008590 PHUM178590 GLEAN_08067
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	25246 w1118; Mi{ET1}CG34126MB06705 18844 w1118 PBac{WH}f05168; PBac{WH}CG34126f05168
VDRC	v107307 P{KK108307}VIE-260B v26336 w1118; P{GD11162}v26336 v26337 w1118; P{GD11162}v26337 v25786 w1118; P{GD10320}v25786/TM3
Genomic Clones ( 2 )
	BACR13M11 BACR40I04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 26 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE17870
Other clones	IP17124
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GM06690 LP08115 LP21932 SD22171
Other clones	125933 214503.22 569596 CK00373 Dmel_dig_004484_0625_1150 Dmel_dig_015601_0585_1715 EK020847 EK020855 EK064048 EK072802 EK073801 EK121123 EK130131 EK247959 EK308359 EN01925 EN15223 EP18234 EP18238 IP16924
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0083962 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33720 318872
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG31653 CG3805 (FlyBase Genome Annotators, 2006)
Additional comments	Annotations CG31653 and CG3805 merged as CG34126 in release 5.1 of the genome annotation. (FlyBase Genome Annotators, 2006)
Other Comments
	New annotation (CG31653) in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_001042870 RefSeq (Proteins) • NP_001036335 DDBJ / EMBL / GenBank • AAN10518 AAN10518.2 BI639559 Entrez Gene - A searchable database of RefSeq genes. • 318872 UniProtKB/TrEMBL • Q8IPL3
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Homeodomain-like (IPR009057) DNA binding domain, putative (IPR009061) Cytochrome c region (IPR012282)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0083962 DRSC - Results from RNAi screens. • FBgn0083962 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0083962 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31653-RA;CG3805-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0083962 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33720 318872 InParanoid A subset of ortholog calls from InParanoid. • AGAP008379-PA Anopheles gambiae (mosquito) XP_392165.3 Apis mellifera (honey bee) XP_001944744.1 Acyrthosiphon pisum (pea aphid) 90549 Branchiostoma floridae (lancelet) BGIBMGA009279-PA Bombyx mori (silk worm) ENSBTAP00000007936 Bos taurus (bovine) CN07774 Caenorhabditis brenneri (small nematode) CBP34820 Caenorhabditis briggsae (nematode) CE28285 Caenorhabditis elegans (worm) ENSCAFP00000009998 Canis familiaris (dog) ENSCINP00000016170 Ciona intestinalis (sea squirt) CPIJ001735 Culex pipens (mosquito) ENSCPOP00000008421 Cavia porcellus (guinea pig) RP28511 Caenorhabditis remanei (nematode) ENSCSAVP00000015730 Ciona savignyi (sedentary tunicate) 105822 Capitella spl (polychaete worm) DDB0205028 Dictyostelium discoideum (amoeba) 318097 Daphnia pulex (daphnia) ENSDARP00000046870 Danio rerio (zebra fish) ENSECAP00000002815 Equus caballus (horse) ENSGACP00000026222 Gymnopilus aculeatus (mushroom) ENSGALP00000018826 Gallus gallus (chicken) ENSP00000279907 Homo sapiens (human) ENSMODP00000006382 Monodelphis domestica (gray opossum) ENSMMUP00000031074 Macaca mulatta (rhesus monkey) ENSMUSP00000020112 Mus musculus (house mouse) XP_001601171.1 Nasonia vitripennis (wasp) ENSOANP00000008887 Ornithorynchus anatinus (platypus) ENSORLP00000019458 Oryzias latipes (japanese killifish) PHUM001685-PA Pediculus humanus (human body louse) ENSPPYP00000018474 Pongo pygmaeus (orangutan) ENSPTRP00000009078 Pan troglodytes (chimpanzee) ENSRNOP00000000588 Rattus norvegicus (norway rat) Smp_141600 Schistosoma mansoni (trematode parasite) XP_001194291.1 Strongylocentrotus purpuratus (purple sea urchin) XP_973878.2 Tribolium castaneum (red flour beetle) ENSTNIP00000014370 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000032799 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000049121 Xenopus tropicalis (frog) modMine - Data generated by the modENCODE project. • FBgn0083962 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB16112 NV20848 NV15814 LH22013 ISCW013299 FBgn0229102 FBgn0226560 FBgn0204654 FBgn0194702 FBgn0173419 FBgn0250332 JGI_V11_318097 FBgn0164122 FBgn0144224 FBgn0120555 FBgn0117167 FBgn0092732 CPIJ001735 BGIBMGA009279 ACYPI007192 GB17882 AGAP008379 AAEL008590 PHUM178590 GLEAN_08067
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	CG3805   CG31653 (Molnar et al., 2006) CG34126 (Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
	FBan0003805 FBgn0031665 FBgn0051653
References ( 14 )
Research paper	Molnar et al., 2006, Genetics 174(3): 1635--1659 A gain-of-function screen identifying genes required for vein formation in the Drosophila melanogaster wing. [FBrf0195387]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] BDGP TI submission, 2008.6.30, set797.xml set797.xml [FBrf0205058] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase Genome Annotators, 2006, Changes affecting gene model number or type in release 5.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 5.1 of the annotated D.melanogaster genome. [FBrf0191550] FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886] FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]