A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\poly

General Information
SymbolDmel\polySpeciesD. melanogaster
NamepolyAnnotation symbolCG9829
Feature typeprotein_coding_geneFlyBase IDFBgn0086371
Gene Model StatusCurrent Stock availability 8 publicly available
Genomic Location
Chromosome (arm)3RRecombination map
Cytogenetic map87E7-87E8Sequence location3R:9,187,538..9,192,632 [-]

Genomic Maps

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Automatically generated summary

See sections below for more information
The gene poly is referred to in FlyBase by the symbol Dmel\poly (CG9829, FBgn0086371). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: insulin receptor binding. There is experimental evidence that it is involved in the biological process: insulin receptor signaling pathway; oocyte microtubule cytoskeleton polarization; melanotic encapsulation of foreign target. 20 alleles are reported. The phenotypes of these alleles are annotated with: wing margin; eye; egg chamber; melanotic mass; nucleus. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Uncharacterised protein family UPF0405. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult Malpighian tubules, inseminated spermatheca, adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1627983_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of poly. Gene sequence location is 3R:9187538..9192632.

User Contributed Data
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
l(3)SG67
Homozygotes pupariate, but do not metamorphose; imaginal discs never exceed in size those of late second-instar larvae. Mutant eye-antennal and wing discs transplanted into adult wild-type female abdomens are never recovered after seven days in culture; they decrease in size and disappear during first three days. Mutant larvae permit reduced growth of implanted wild-type discs and do not interfere with their subsequent development in normal hosts (Shearn, Hersperger, Hersperger, Pentz, and Denker, 1978, Genetics 89: 355-70). Larval ganglion cells exhibit extremely low mitotic index and weak effects on chromosome condensation; chromosomes thin and elongated (Gatti and Baker, 1989, Genes Dev. 3: 438-53).
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Description
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
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FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
87E7-87E8  
Left limit from in situ hybridisation (FBrf0067338) Right limit from in situ hybridisation (FBrf0067338)  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
87E5-87E10  
(determined by in situ hybridisation)  
87E7-87E8  
(determined by in situ hybridisation)  
87E5-87E10  
(determined by in situ hybridisation)  
87E5-87E10  
(determined by in situ hybridisation)  
87E5-87E6  
(determined by in situ hybridisation)  
87E7-87E8  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\poly for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0303265 FBtr0082747 FBtr0082772 FBtr0082748 FBpp0082240 FBpp0292357 FBpp0082216 FBpp0082215 FBti0053257 FBti0113301 FBti0033485 FBti0047871 FBti0005528 FBti0055482 FBti0011784 FBti0110210 FBti0103991 FBti0111875 FBti0105681 FBti0126067_1 FBti0126067_2 FBti0052805 FBti0043446 FBti0064985 FBti0064986 FBti0066839 FBti0037630 FBti0050042 FBti0027232 FBti0043558
Comments on Gene Model
Gene model reviewed during 5.47
Annotated transcripts do not represent all supported alternative splices within 5' UTR.
Low-frequency RNA-Seq exon junction(s) not annotated.
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0082772
  1157
  251
FBtr0303265
  1314
  251
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0082240  
27.9  
251  
6.91  
FBpp0292357  
27.9  
251  
6.91  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
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Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)


   Styles
   Scales

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult Malpighian tubules, inseminated spermatheca, adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 375.475
Larval Midgut
 
 145.7
Larval Hindgut
 
 224.1
Larval Malpighian Tubules
 
 334.7
Larval Fat Body
 
 406.8
Larval Salivary Gland
 
 390.5
Larval Trachea
 
 363.175
Larval Carcass
 
 214.425
Adult Head
 
 273.2
Adult Eye
 
 226.225
Adult Brain
 
 292.4
Adult Thoracic-Abdominal Ganglion
 
 298.7
Adult Crop
 
 297.1
Adult Midgut
 
 224.1
Adult Hindgut
 
 253.3
Adult Malpighian Tubules
 
 832.5
Adult Fat Body
 
 249.8
Adult Salivary Gland
 
 348.4
Adult Heart
 
 319.125
Adult VirginFemale Spermatheca
 
 447
Adult InseminatedFemale Spermatheca
 
 509.9
Adult Ovary
 
 471.5
Adult Testis
 
 679.2
Adult Male Accessory Gland
 
 385.7
Adult Carcass
 
 283.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 375.475
Larval Midgut
 
 145.7
Larval Hindgut
 
 224.1
Larval Malpighian Tubules
 
 334.7
Larval Fat Body
 
 406.8
Larval Salivary Gland
 
 390.5
Larval Trachea
 
 363.175
Larval Carcass
 
 214.425
Adult Head
 
 273.2
Adult Eye
 
 226.225
Adult Brain
 
 292.4
Adult Thoracic-Abdominal Ganglion
 
 298.7
Adult Crop
 
 297.1
Adult Midgut
 
 224.1
Adult Hindgut
 
 253.3
Adult Malpighian Tubules
 (832.5)
Adult Fat Body
 
 249.8
Adult Salivary Gland
 
 348.4
Adult Heart
 
 319.125
Adult VirginFemale Spermatheca
 
 447
Adult InseminatedFemale Spermatheca
 509.9
Adult Ovary
 
 471.5
Adult Testis
 (679.2)
Adult Male Accessory Gland
 
 385.7
Adult Carcass
 
 283.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 375.475
Larval Midgut
 
 145.7
Larval Hindgut
 
 224.1
Larval Malpighian Tubules
 
 334.7
Larval Fat Body
 
 406.8
Larval Salivary Gland
 
 390.5
Larval Trachea
 
 363.175
Larval Carcass
 
 214.425
Adult Head
 
 273.2
Adult Eye
 
 226.225
Adult Brain
 
 292.4
Adult Thoracic-Abdominal Ganglion
 
 298.7
Adult Crop
 
 297.1
Adult Midgut
 
 224.1
Adult Hindgut
 
 253.3
Adult Malpighian Tubules
 
 832.5
Adult Fat Body
 
 249.8
Adult Salivary Gland
 
 348.4
Adult Heart
 
 319.125
Adult VirginFemale Spermatheca
 
 447
Adult InseminatedFemale Spermatheca
 
 509.9
Adult Ovary
 
 471.5
Adult Testis
 
 679.2
Adult Male Accessory Gland
 
 385.7
Adult Carcass
 
 283.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 375.475
Larval Midgut
 
 145.7
Larval Hindgut
 
 224.1
Larval Malpighian Tubules
 
 334.7
Larval Fat Body
 
 406.8
Larval Salivary Gland
 
 390.5
Larval Trachea
 
 363.175
Larval Carcass
 
 214.425
Adult Head
 
 273.2
Adult Eye
 
 226.225
Adult Brain
 
 292.4
Adult Thoracic-Abdominal Ganglion
 
 298.7
Adult Crop
 
 297.1
Adult Midgut
 
 224.1
Adult Hindgut
 
 253.3
Adult Malpighian Tubules
 
 832.5
Adult Fat Body
 
 249.8
Adult Salivary Gland
 
 348.4
Adult Heart
 
 319.125
Adult VirginFemale Spermatheca
 
 447
Adult InseminatedFemale Spermatheca
 
 509.9
Adult Ovary
 
 471.5
Adult Testis
 
 679.2
Adult Male Accessory Gland
 
 385.7
Adult Carcass
 
 283.1
Expression Level Scale
 Very high 
log, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 375.475
Larval Midgut
 
 145.7
Larval Hindgut
 
 224.1
Larval Malpighian Tubules
 
 334.7
Larval Fat Body
 
 406.8
Larval Salivary Gland
 
 390.5
Larval Trachea
 
 363.175
Larval Carcass
 
 214.425
Adult Head
 
 273.2
Adult Eye
 
 226.225
Adult Brain
 
 292.4
Adult Thoracic-Abdominal Ganglion
 
 298.7
Adult Crop
 
 297.1
Adult Midgut
 
 224.1
Adult Hindgut
 
 253.3
Adult Malpighian Tubules
 
 832.5
Adult Fat Body
 
 249.8
Adult Salivary Gland
 
 348.4
Adult Heart
 
 319.125
Adult VirginFemale Spermatheca
 
 447
Adult InseminatedFemale Spermatheca
 
 509.9
Adult Ovary
 
 471.5
Adult Testis
 
 679.2
Adult Male Accessory Gland
 
 385.7
Adult Carcass
 
 283.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 375.475
Larval Midgut
 
 145.7
Larval Hindgut
 
 224.1
Larval Malpighian Tubules
 
 334.7
Larval Fat Body
 
 406.8
Larval Salivary Gland
 
 390.5
Larval Trachea
 
 363.175
Larval Carcass
 
 214.425
Adult Head
 
 273.2
Adult Eye
 
 226.225
Adult Brain
 
 292.4
Adult Thoracic-Abdominal Ganglion
 
 298.7
Adult Crop
 
 297.1
Adult Midgut
 
 224.1
Adult Hindgut
 
 253.3
Adult Malpighian Tubules
 (832.5)
Adult Fat Body
 
 249.8
Adult Salivary Gland
 
 348.4
Adult Heart
 
 319.125
Adult VirginFemale Spermatheca
 
 447
Adult InseminatedFemale Spermatheca
 509.9
Adult Ovary
 
 471.5
Adult Testis
 679.2
Adult Male Accessory Gland
 
 385.7
Adult Carcass
 
 283.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 375.475
Larval Midgut
 
 145.7
Larval Hindgut
 
 224.1
Larval Malpighian Tubules
 
 334.7
Larval Fat Body
 
 406.8
Larval Salivary Gland
 
 390.5
Larval Trachea
 
 363.175
Larval Carcass
 
 214.425
Adult Head
 
 273.2
Adult Eye
 
 226.225
Adult Brain
 
 292.4
Adult Thoracic-Abdominal Ganglion
 
 298.7
Adult Crop
 
 297.1
Adult Midgut
 
 224.1
Adult Hindgut
 
 253.3
Adult Malpighian Tubules
 
 832.5
Adult Fat Body
 
 249.8
Adult Salivary Gland
 
 348.4
Adult Heart
 
 319.125
Adult VirginFemale Spermatheca
 
 447
Adult InseminatedFemale Spermatheca
 
 509.9
Adult Ovary
 
 471.5
Adult Testis
 
 679.2
Adult Male Accessory Gland
 
 385.7
Adult Carcass
 
 283.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 375.475
Larval Midgut
 
 145.7
Larval Hindgut
 
 224.1
Larval Malpighian Tubules
 
 334.7
Larval Fat Body
 
 406.8
Larval Salivary Gland
 
 390.5
Larval Trachea
 
 363.175
Larval Carcass
 
 214.425
Adult Head
 
 273.2
Adult Eye
 
 226.225
Adult Brain
 
 292.4
Adult Thoracic-Abdominal Ganglion
 
 298.7
Adult Crop
 
 297.1
Adult Midgut
 
 224.1
Adult Hindgut
 
 253.3
Adult Malpighian Tubules
 
 832.5
Adult Fat Body
 
 249.8
Adult Salivary Gland
 
 348.4
Adult Heart
 
 319.125
Adult VirginFemale Spermatheca
 
 447
Adult InseminatedFemale Spermatheca
 
 509.9
Adult Ovary
 
 471.5
Adult Testis
 
 679.2
Adult Male Accessory Gland
 
 385.7
Adult Carcass
 
 283.1
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 273.2
 
NA 
Eye
 
 226.225
 
NA 
Brain
 
 292.4
 
375.475 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 298.7
 
NA 
Crop
 
 297.1
 
145.7 
Midgut
 
 224.1
 
224.1 
Hindgut
 
 253.3
 
334.7 
Malpighian Tubules
 
 832.5
 
406.8 
Fat Body
 
 249.8
 
390.5 
Salivary Gland
 
 348.4
 
NA 
Heart
 
 319.125
 
363.175 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 447
 
NA 
InseminatedFemale Spermatheca
 
 509.9
 
NA 
Ovary
 
 471.5
 
NA 
Testis
 
 679.2
 
NA 
Male Accessory Gland
 
 385.7
 
214.425 
Carcass
 
 283.1

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 21
central nervous system, larvae L3
 
 12
central nervous system, pupae P8
 
 8
head, virgin 1-day female
 
 10
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 9
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 6
head, mated 1-day male
 
 9
head, mated 4-day male
 
 9
head, mated 20-day male
 
 12
salivary gland, larvae L3 wandering
 
 10
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 15
digestive system, 1-day adult
 
 13
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 9
fat body, larvae L3 wandering
 
 9
fat body, white prepupae
 
 15
fat body, pupae P8
 
 27
carcass, larvae L3 wandering
 
 12
carcass, 1-day adult
 
 9
carcass, 4-day adult
 
 10
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 25
ovary, mated 4-day female
 
 18
testis, mated 4-day male
 
 52
accessory gland, mated 4-day male
 
 16
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 21
central nervous system, larvae L3
 
 12
central nervous system, pupae P8
 
 8
head, virgin 1-day female
 
 10
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 9
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 6
head, mated 1-day male
 
 9
head, mated 4-day male
 
 9
head, mated 20-day male
 
 12
salivary gland, larvae L3 wandering
 
 10
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 15
digestive system, 1-day adult
 
 13
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 9
fat body, larvae L3 wandering
 
 9
fat body, white prepupae
 
 15
fat body, pupae P8
 (27)
carcass, larvae L3 wandering
 
 12
carcass, 1-day adult
 
 9
carcass, 4-day adult
 
 10
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 25
ovary, mated 4-day female
 
 18
testis, mated 4-day male
 (52)
accessory gland, mated 4-day male
 
 16
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 21
central nervous system, larvae L3
 
 12
central nervous system, pupae P8
 
 8
head, virgin 1-day female
 
 10
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 9
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 6
head, mated 1-day male
 
 9
head, mated 4-day male
 
 9
head, mated 20-day male
 
 12
salivary gland, larvae L3 wandering
 
 10
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 15
digestive system, 1-day adult
 
 13
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 9
fat body, larvae L3 wandering
 
 9
fat body, white prepupae
 
 15
fat body, pupae P8
 
 27
carcass, larvae L3 wandering
 
 12
carcass, 1-day adult
 
 9
carcass, 4-day adult
 
 10
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 25
ovary, mated 4-day female
 
 18
testis, mated 4-day male
 
 52
accessory gland, mated 4-day male
 
 16
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 21
central nervous system, larvae L3
 
 12
central nervous system, pupae P8
 
 8
head, virgin 1-day female
 
 10
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 9
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 6
head, mated 1-day male
 
 9
head, mated 4-day male
 
 9
head, mated 20-day male
 
 12
salivary gland, larvae L3 wandering
 
 10
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 15
digestive system, 1-day adult
 
 13
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 9
fat body, larvae L3 wandering
 
 9
fat body, white prepupae
 
 15
fat body, pupae P8
 
 27
carcass, larvae L3 wandering
 
 12
carcass, 1-day adult
 
 9
carcass, 4-day adult
 
 10
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 25
ovary, mated 4-day female
 
 18
testis, mated 4-day male
 
 52
accessory gland, mated 4-day male
 
 16
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 21
central nervous system, larvae L3
 
 12
central nervous system, pupae P8
 
 8
head, virgin 1-day female
 
 10
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 9
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 6
head, mated 1-day male
 
 9
head, mated 4-day male
 
 9
head, mated 20-day male
 
 12
salivary gland, larvae L3 wandering
 
 10
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 15
digestive system, 1-day adult
 
 13
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 9
fat body, larvae L3 wandering
 
 9
fat body, white prepupae
 
 15
fat body, pupae P8
 
 27
carcass, larvae L3 wandering
 
 12
carcass, 1-day adult
 
 9
carcass, 4-day adult
 
 10
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 25
ovary, mated 4-day female
 
 18
testis, mated 4-day male
 
 52
accessory gland, mated 4-day male
 
 16
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 21
central nervous system, larvae L3
 
 12
central nervous system, pupae P8
 
 8
head, virgin 1-day female
 
 10
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 9
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 6
head, mated 1-day male
 
 9
head, mated 4-day male
 
 9
head, mated 20-day male
 
 12
salivary gland, larvae L3 wandering
 
 10
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 15
digestive system, 1-day adult
 
 13
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 9
fat body, larvae L3 wandering
 
 9
fat body, white prepupae
 
 15
fat body, pupae P8
 27
carcass, larvae L3 wandering
 
 12
carcass, 1-day adult
 
 9
carcass, 4-day adult
 
 10
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 25
ovary, mated 4-day female
 
 18
testis, mated 4-day male
 (52)
accessory gland, mated 4-day male
 
 16
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 21
central nervous system, larvae L3
 
 12
central nervous system, pupae P8
 
 8
head, virgin 1-day female
 
 10
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 9
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 6
head, mated 1-day male
 
 9
head, mated 4-day male
 
 9
head, mated 20-day male
 
 12
salivary gland, larvae L3 wandering
 
 10
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 15
digestive system, 1-day adult
 
 13
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 9
fat body, larvae L3 wandering
 
 9
fat body, white prepupae
 
 15
fat body, pupae P8
 
 27
carcass, larvae L3 wandering
 
 12
carcass, 1-day adult
 
 9
carcass, 4-day adult
 
 10
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 25
ovary, mated 4-day female
 
 18
testis, mated 4-day male
 
 52
accessory gland, mated 4-day male
 
 16
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 21
central nervous system, larvae L3
 
 12
central nervous system, pupae P8
 
 8
head, virgin 1-day female
 
 10
head, virgin 4-day female
 
 6
head, virgin 20-day female
 
 9
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 6
head, mated 1-day male
 
 9
head, mated 4-day male
 
 9
head, mated 20-day male
 
 12
salivary gland, larvae L3 wandering
 
 10
salivary gland, white prepupae
 
 10
digestive system, larvae L3 wandering
 
 15
digestive system, 1-day adult
 
 13
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 9
fat body, larvae L3 wandering
 
 9
fat body, white prepupae
 
 15
fat body, pupae P8
 
 27
carcass, larvae L3 wandering
 
 12
carcass, 1-day adult
 
 9
carcass, 4-day adult
 
 10
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 25
ovary, mated 4-day female
 
 18
testis, mated 4-day male
 
 52
accessory gland, mated 4-day male
 
 16
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 55
embryo 02-04hr
 
 53
embryo 04-06hr
 
 64
embryo 06-08hr
 
 46
embryo 08-10hr
 
 41
embryo 10-12hr
 
 46
embryo 12-14hr
 
 31
embryo 14-16hr
 
 30
embryo 16-18hr
 
 28
embryo 18-20hr
 
 27
embryo 20-22hr
 
 28
embryo 22-24hr
 
 36
larva L1
 
 31
larva L2
 
 31
larva L3 12hr old
 
 24
larva L3 puffstage 1-2
 
 26
larva L3 puffstage 3-6
 
 33
larva L3 puffstage 7-9
 
 42
white prepupae new
 
 40
white prepupae 12hr
 
 41
white prepupae 24hr
 
 48
pupae 2d postWPP
 
 45
pupae 3d postWPP
 
 39
pupae 4d postWPP
 
 40
adult male 01day
 
 48
adult male 05day
 
 55
adult male 30day
 
 60
adult female 01day
 
 41
adult female 05day
 
 42
adult female 30day
 
 40
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (55)
embryo 02-04hr
 (53)
embryo 04-06hr
 (64)
embryo 06-08hr
 (46)
embryo 08-10hr
 (41)
embryo 10-12hr
 (46)
embryo 12-14hr
 (31)
embryo 14-16hr
 (30)
embryo 16-18hr
 (28)
embryo 18-20hr
 (27)
embryo 20-22hr
 (28)
embryo 22-24hr
 (36)
larva L1
 (31)
larva L2
 (31)
larva L3 12hr old
 
 24
larva L3 puffstage 1-2
 26
larva L3 puffstage 3-6
 (33)
larva L3 puffstage 7-9
 (42)
white prepupae new
 (40)
white prepupae 12hr
 (41)
white prepupae 24hr
 (48)
pupae 2d postWPP
 (45)
pupae 3d postWPP
 (39)
pupae 4d postWPP
 (40)
adult male 01day
 (48)
adult male 05day
 (55)
adult male 30day
 (60)
adult female 01day
 (41)
adult female 05day
 (42)
adult female 30day
 (40)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 55
embryo 02-04hr
 
 53
embryo 04-06hr
 
 64
embryo 06-08hr
 
 46
embryo 08-10hr
 
 41
embryo 10-12hr
 
 46
embryo 12-14hr
 
 31
embryo 14-16hr
 
 30
embryo 16-18hr
 
 28
embryo 18-20hr
 
 27
embryo 20-22hr
 
 28
embryo 22-24hr
 
 36
larva L1
 
 31
larva L2
 
 31
larva L3 12hr old
 
 24
larva L3 puffstage 1-2
 
 26
larva L3 puffstage 3-6
 
 33
larva L3 puffstage 7-9
 
 42
white prepupae new
 
 40
white prepupae 12hr
 
 41
white prepupae 24hr
 
 48
pupae 2d postWPP
 
 45
pupae 3d postWPP
 
 39
pupae 4d postWPP
 
 40
adult male 01day
 
 48
adult male 05day
 
 55
adult male 30day
 
 60
adult female 01day
 
 41
adult female 05day
 
 42
adult female 30day
 
 40
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 55
embryo 02-04hr
 
 53
embryo 04-06hr
 
 64
embryo 06-08hr
 
 46
embryo 08-10hr
 
 41
embryo 10-12hr
 
 46
embryo 12-14hr
 
 31
embryo 14-16hr
 
 30
embryo 16-18hr
 
 28
embryo 18-20hr
 
 27
embryo 20-22hr
 
 28
embryo 22-24hr
 
 36
larva L1
 
 31
larva L2
 
 31
larva L3 12hr old
 
 24
larva L3 puffstage 1-2
 
 26
larva L3 puffstage 3-6
 
 33
larva L3 puffstage 7-9
 
 42
white prepupae new
 
 40
white prepupae 12hr
 
 41
white prepupae 24hr
 
 48
pupae 2d postWPP
 
 45
pupae 3d postWPP
 
 39
pupae 4d postWPP
 
 40
adult male 01day
 
 48
adult male 05day
 
 55
adult male 30day
 
 60
adult female 01day
 
 41
adult female 05day
 
 42
adult female 30day
 
 40
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 55
embryo 02-04hr
 
 53
embryo 04-06hr
 
 64
embryo 06-08hr
 
 46
embryo 08-10hr
 
 41
embryo 10-12hr
 
 46
embryo 12-14hr
 
 31
embryo 14-16hr
 
 30
embryo 16-18hr
 
 28
embryo 18-20hr
 
 27
embryo 20-22hr
 
 28
embryo 22-24hr
 
 36
larva L1
 
 31
larva L2
 
 31
larva L3 12hr old
 
 24
larva L3 puffstage 1-2
 
 26
larva L3 puffstage 3-6
 
 33
larva L3 puffstage 7-9
 
 42
white prepupae new
 
 40
white prepupae 12hr
 
 41
white prepupae 24hr
 
 48
pupae 2d postWPP
 
 45
pupae 3d postWPP
 
 39
pupae 4d postWPP
 
 40
adult male 01day
 
 48
adult male 05day
 
 55
adult male 30day
 
 60
adult female 01day
 
 41
adult female 05day
 
 42
adult female 30day
 
 40
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (55)
embryo 02-04hr
 (53)
embryo 04-06hr
 (64)
embryo 06-08hr
 (46)
embryo 08-10hr
 (41)
embryo 10-12hr
 (46)
embryo 12-14hr
 31
embryo 14-16hr
 30
embryo 16-18hr
 28
embryo 18-20hr
 27
embryo 20-22hr
 28
embryo 22-24hr
 (36)
larva L1
 31
larva L2
 31
larva L3 12hr old
 
 24
larva L3 puffstage 1-2
 26
larva L3 puffstage 3-6
 (33)
larva L3 puffstage 7-9
 (42)
white prepupae new
 (40)
white prepupae 12hr
 (41)
white prepupae 24hr
 (48)
pupae 2d postWPP
 (45)
pupae 3d postWPP
 (39)
pupae 4d postWPP
 (40)
adult male 01day
 (48)
adult male 05day
 (55)
adult male 30day
 (60)
adult female 01day
 (41)
adult female 05day
 (42)
adult female 30day
 (40)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 55
embryo 02-04hr
 
 53
embryo 04-06hr
 
 64
embryo 06-08hr
 
 46
embryo 08-10hr
 
 41
embryo 10-12hr
 
 46
embryo 12-14hr
 
 31
embryo 14-16hr
 
 30
embryo 16-18hr
 
 28
embryo 18-20hr
 
 27
embryo 20-22hr
 
 28
embryo 22-24hr
 
 36
larva L1
 
 31
larva L2
 
 31
larva L3 12hr old
 
 24
larva L3 puffstage 1-2
 
 26
larva L3 puffstage 3-6
 
 33
larva L3 puffstage 7-9
 
 42
white prepupae new
 
 40
white prepupae 12hr
 
 41
white prepupae 24hr
 
 48
pupae 2d postWPP
 
 45
pupae 3d postWPP
 
 39
pupae 4d postWPP
 
 40
adult male 01day
 
 48
adult male 05day
 
 55
adult male 30day
 
 60
adult female 01day
 
 41
adult female 05day
 
 42
adult female 30day
 
 40
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 55
embryo 02-04hr
 
 53
embryo 04-06hr
 
 64
embryo 06-08hr
 
 46
embryo 08-10hr
 
 41
embryo 10-12hr
 
 46
embryo 12-14hr
 
 31
embryo 14-16hr
 
 30
embryo 16-18hr
 
 28
embryo 18-20hr
 
 27
embryo 20-22hr
 
 28
embryo 22-24hr
 
 36
larva L1
 
 31
larva L2
 
 31
larva L3 12hr old
 
 24
larva L3 puffstage 1-2
 
 26
larva L3 puffstage 3-6
 
 33
larva L3 puffstage 7-9
 
 42
white prepupae new
 
 40
white prepupae 12hr
 
 41
white prepupae 24hr
 
 48
pupae 2d postWPP
 
 45
pupae 3d postWPP
 
 39
pupae 4d postWPP
 
 40
adult male 01day
 
 48
adult male 05day
 
 55
adult male 30day
 
 60
adult female 01day
 
 41
adult female 05day
 
 42
adult female 30day
 
 40
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 22
Schneider line 2 Sg4
 
 16
embryonic 1182-4H
 
 12
embryonic GM2
 
 18
embryonic Kc167
 
 13
embryonic S1
 
 18
embryonic S3
 
 18
leg disc CME L1
 
 12
wing disc CME-W2
 
 19
wing disc ML-DmD8
 
 19
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 16
wing disc ML-DmD21
 
 42
wing disc ML-DmD32
 
 14
haltere disc ML-DmD17-c3
 
 36
eye-antennal disc ML-DmD11
 
 16
antennal disc ML-DmD20-c5
 
 21
mixed discs ML-DmD4-c1
 
 30
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 34
tumorous blood cells mbn2
 
 11
ovary fGS/OSS
 
 18
ovary OSC
 
 14
ovary OSS
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 22
Schneider line 2 Sg4
 
 16
embryonic 1182-4H
 
 12
embryonic GM2
 
 18
embryonic Kc167
 
 13
embryonic S1
 
 18
embryonic S3
 
 18
leg disc CME L1
 
 12
wing disc CME-W2
 
 19
wing disc ML-DmD8
 
 19
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 16
wing disc ML-DmD21
 (42)
wing disc ML-DmD32
 
 14
haltere disc ML-DmD17-c3
 (36)
eye-antennal disc ML-DmD11
 
 16
antennal disc ML-DmD20-c5
 
 21
mixed discs ML-DmD4-c1
 (30)
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 (34)
tumorous blood cells mbn2
 
 11
ovary fGS/OSS
 
 18
ovary OSC
 
 14
ovary OSS
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 22
Schneider line 2 Sg4
 
 16
embryonic 1182-4H
 
 12
embryonic GM2
 
 18
embryonic Kc167
 
 13
embryonic S1
 
 18
embryonic S3
 
 18
leg disc CME L1
 
 12
wing disc CME-W2
 
 19
wing disc ML-DmD8
 
 19
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 16
wing disc ML-DmD21
 
 42
wing disc ML-DmD32
 
 14
haltere disc ML-DmD17-c3
 
 36
eye-antennal disc ML-DmD11
 
 16
antennal disc ML-DmD20-c5
 
 21
mixed discs ML-DmD4-c1
 
 30
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 34
tumorous blood cells mbn2
 
 11
ovary fGS/OSS
 
 18
ovary OSC
 
 14
ovary OSS
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 22
Schneider line 2 Sg4
 
 16
embryonic 1182-4H
 
 12
embryonic GM2
 
 18
embryonic Kc167
 
 13
embryonic S1
 
 18
embryonic S3
 
 18
leg disc CME L1
 
 12
wing disc CME-W2
 
 19
wing disc ML-DmD8
 
 19
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 16
wing disc ML-DmD21
 
 42
wing disc ML-DmD32
 
 14
haltere disc ML-DmD17-c3
 
 36
eye-antennal disc ML-DmD11
 
 16
antennal disc ML-DmD20-c5
 
 21
mixed discs ML-DmD4-c1
 
 30
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 34
tumorous blood cells mbn2
 
 11
ovary fGS/OSS
 
 18
ovary OSC
 
 14
ovary OSS
 
 7
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 22
Schneider line 2 Sg4
 
 16
embryonic 1182-4H
 
 12
embryonic GM2
 
 18
embryonic Kc167
 
 13
embryonic S1
 
 18
embryonic S3
 
 18
leg disc CME L1
 
 12
wing disc CME-W2
 
 19
wing disc ML-DmD8
 
 19
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 16
wing disc ML-DmD21
 
 42
wing disc ML-DmD32
 
 14
haltere disc ML-DmD17-c3
 
 36
eye-antennal disc ML-DmD11
 
 16
antennal disc ML-DmD20-c5
 
 21
mixed discs ML-DmD4-c1
 
 30
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 34
tumorous blood cells mbn2
 
 11
ovary fGS/OSS
 
 18
ovary OSC
 
 14
ovary OSS
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 22
Schneider line 2 Sg4
 
 16
embryonic 1182-4H
 
 12
embryonic GM2
 
 18
embryonic Kc167
 
 13
embryonic S1
 
 18
embryonic S3
 
 18
leg disc CME L1
 
 12
wing disc CME-W2
 
 19
wing disc ML-DmD8
 
 19
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 16
wing disc ML-DmD21
 (42)
wing disc ML-DmD32
 
 14
haltere disc ML-DmD17-c3
 (36)
eye-antennal disc ML-DmD11
 
 16
antennal disc ML-DmD20-c5
 
 21
mixed discs ML-DmD4-c1
 30
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 (34)
tumorous blood cells mbn2
 
 11
ovary fGS/OSS
 
 18
ovary OSC
 
 14
ovary OSS
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 22
Schneider line 2 Sg4
 
 16
embryonic 1182-4H
 
 12
embryonic GM2
 
 18
embryonic Kc167
 
 13
embryonic S1
 
 18
embryonic S3
 
 18
leg disc CME L1
 
 12
wing disc CME-W2
 
 19
wing disc ML-DmD8
 
 19
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 16
wing disc ML-DmD21
 
 42
wing disc ML-DmD32
 
 14
haltere disc ML-DmD17-c3
 
 36
eye-antennal disc ML-DmD11
 
 16
antennal disc ML-DmD20-c5
 
 21
mixed discs ML-DmD4-c1
 
 30
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 34
tumorous blood cells mbn2
 
 11
ovary fGS/OSS
 
 18
ovary OSC
 
 14
ovary OSS
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 22
Schneider line 2 Sg4
 
 16
embryonic 1182-4H
 
 12
embryonic GM2
 
 18
embryonic Kc167
 
 13
embryonic S1
 
 18
embryonic S3
 
 18
leg disc CME L1
 
 12
wing disc CME-W2
 
 19
wing disc ML-DmD8
 
 19
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 16
wing disc ML-DmD21
 
 42
wing disc ML-DmD32
 
 14
haltere disc ML-DmD17-c3
 
 36
eye-antennal disc ML-DmD11
 
 16
antennal disc ML-DmD20-c5
 
 21
mixed discs ML-DmD4-c1
 
 30
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 34
tumorous blood cells mbn2
 
 11
ovary fGS/OSS
 
 18
ovary OSC
 
 14
ovary OSS
 
 7
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 7
cold shock, 4-day adult
 
 6
heat shock, 4-day adult
 
 16
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 19
Cadmium 50 mM 48 hrs, 4-day adult
 
 18
Cadmium 100 mM 48 hrs, 4-day adult
 
 17
Copper 0.5 mM 12 hrs, larvae L3
 
 12
Copper 15 mM 48 hrs, 4-day adult
 
 19
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 10
Ethanol 2.5% 3 hrs, larvae L3
 
 19
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 11
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 14
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 17
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 17
Paraquat 10 mM 48 hrs, 4-day adult
 
 22
Rotenone 2 μg 12 hrs, larvae L3
 
 20
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 7
cold shock, 4-day adult
 
 6
heat shock, 4-day adult
 
 16
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 19
Cadmium 50 mM 48 hrs, 4-day adult
 
 18
Cadmium 100 mM 48 hrs, 4-day adult
 
 17
Copper 0.5 mM 12 hrs, larvae L3
 
 12
Copper 15 mM 48 hrs, 4-day adult
 
 19
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 10
Ethanol 2.5% 3 hrs, larvae L3
 
 19
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 11
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 14
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 17
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 17
Paraquat 10 mM 48 hrs, 4-day adult
 
 22
Rotenone 2 μg 12 hrs, larvae L3
 
 20
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 7
cold shock, 4-day adult
 
 6
heat shock, 4-day adult
 
 16
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 19
Cadmium 50 mM 48 hrs, 4-day adult
 
 18
Cadmium 100 mM 48 hrs, 4-day adult
 
 17
Copper 0.5 mM 12 hrs, larvae L3
 
 12
Copper 15 mM 48 hrs, 4-day adult
 
 19
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 10
Ethanol 2.5% 3 hrs, larvae L3
 
 19
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 11
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 14
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 17
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 17
Paraquat 10 mM 48 hrs, 4-day adult
 
 22
Rotenone 2 μg 12 hrs, larvae L3
 
 20
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 7
cold shock, 4-day adult
 
 6
heat shock, 4-day adult
 
 16
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 19
Cadmium 50 mM 48 hrs, 4-day adult
 
 18
Cadmium 100 mM 48 hrs, 4-day adult
 
 17
Copper 0.5 mM 12 hrs, larvae L3
 
 12
Copper 15 mM 48 hrs, 4-day adult
 
 19
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 10
Ethanol 2.5% 3 hrs, larvae L3
 
 19
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 11
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 14
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 17
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 17
Paraquat 10 mM 48 hrs, 4-day adult
 
 22
Rotenone 2 μg 12 hrs, larvae L3
 
 20
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 7
cold shock, 4-day adult
 
 6
heat shock, 4-day adult
 
 16
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 19
Cadmium 50 mM 48 hrs, 4-day adult
 
 18
Cadmium 100 mM 48 hrs, 4-day adult
 
 17
Copper 0.5 mM 12 hrs, larvae L3
 
 12
Copper 15 mM 48 hrs, 4-day adult
 
 19
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 10
Ethanol 2.5% 3 hrs, larvae L3
 
 19
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 11
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 14
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 17
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 17
Paraquat 10 mM 48 hrs, 4-day adult
 
 22
Rotenone 2 μg 12 hrs, larvae L3
 
 20
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 7
cold shock, 4-day adult
 
 6
heat shock, 4-day adult
 
 16
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 19
Cadmium 50 mM 48 hrs, 4-day adult
 
 18
Cadmium 100 mM 48 hrs, 4-day adult
 
 17
Copper 0.5 mM 12 hrs, larvae L3
 
 12
Copper 15 mM 48 hrs, 4-day adult
 
 19
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 10
Ethanol 2.5% 3 hrs, larvae L3
 
 19
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 11
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 14
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 17
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 17
Paraquat 10 mM 48 hrs, 4-day adult
 
 22
Rotenone 2 μg 12 hrs, larvae L3
 
 20
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 7
cold shock, 4-day adult
 
 6
heat shock, 4-day adult
 
 16
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 19
Cadmium 50 mM 48 hrs, 4-day adult
 
 18
Cadmium 100 mM 48 hrs, 4-day adult
 
 17
Copper 0.5 mM 12 hrs, larvae L3
 
 12
Copper 15 mM 48 hrs, 4-day adult
 
 19
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 10
Ethanol 2.5% 3 hrs, larvae L3
 
 19
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 11
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 14
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 17
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 17
Paraquat 10 mM 48 hrs, 4-day adult
 
 22
Rotenone 2 μg 12 hrs, larvae L3
 
 20
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 7
cold shock, 4-day adult
 
 6
heat shock, 4-day adult
 
 16
Cadmium 50 mM 6 hrs, larvae L3
 
 14
Cadmium 50 mM 12 hrs, larvae L3
 
 19
Cadmium 50 mM 48 hrs, 4-day adult
 
 18
Cadmium 100 mM 48 hrs, 4-day adult
 
 17
Copper 0.5 mM 12 hrs, larvae L3
 
 12
Copper 15 mM 48 hrs, 4-day adult
 
 19
Zinc 5 mM 12 hrs, larvae L3
 
 8
Zinc 4.5 mM 48 hrs, 4-day adult
 
 10
Ethanol 2.5% 3 hrs, larvae L3
 
 19
Ethanol 5% 3 hrs, larvae L3
 
 16
Ethanol 10% 3 hrs, larvae L3
 
 11
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 14
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 17
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 8
Paraquat 5 mM 48 hrs, 4-day adult
 
 17
Paraquat 10 mM 48 hrs, 4-day adult
 
 22
Rotenone 2 μg 12 hrs, larvae L3
 
 20
Rotenone 8 μg 12 hrs, larvae L3
 
 12
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 16 )
For All Classical Alleles Show

Allele of polyClassMutagenStocksKnown lesion
poly05137amorphic allele - molecular evidence1 Yes
polyc01091
1 --
polyd042861 --
polye027341 --
polyEY03597
1 --
polyf015521 --
polyf061911 --
polyNP0135
1 --
poly10 Yes
poly2
0 --
polyc015160 --
polyc015170 --
polye027550 --
polyEP37030 --
polyF332.10 Yes
polyS008131b0 --
hide Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show

Allele of polyClassMutagenStocksKnown lesion
polyGD146920 Yes
polyScer\UAS.cBa0 Yes
polyScer\UAS.P\T.cKa0 Yes
polyScer\UAS.P\T.T:Avic\GFP-EGFP0 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )

There is no information supporting a cellular component term for this gene.

(Based on a review of available data before: 2006)

hide Terms Based on Experimental Evidence ( 4 terms )
Molecular Function
CV term
References
Biological Process
CV term
References
Cellular Component ( 0 terms)
hide Terms Based on Predictions or Assertions ( 0 terms )
hide Sequence Ontology: Class of Gene
 
hide Interactions & Pathways
hide Summary of Physical Interactions
protein-protein
Interacting group
Assay
References
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti bait coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
poly allele
Gene
References
hide External Data
Linkouts
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
hide OrthoDB Orthologs (28) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
No orthologs identified
hideOrthologs in Drosophila Species (EOG6RV3BP)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila simulans
 
 
 
Drosophila sechellia
 
 
 
Drosophila erecta
 
 
 
Drosophila yakuba
 
 
 
Drosophila ananassae
 
 
 
Drosophila pseudoobscura pseudoobscura
 
 
 
Drosophila persimilis
 
 
 
Drosophila willistoni
 
 
 
Drosophila virilis
 
 
 
Drosophila mojavensis
 
 
 
Drosophila grimshawi
 
 
 
hideOrthologs in non-Drosophila Dipterans (EOG6GF3QH)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Aedes aegypti
Yellow fever mosquito 
 
Anopheles gambiae
Malaria mosquito 
 
hideOrthologs in non-Dipteran Insects (EOG6J6QNJ)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG016845
 
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH26298
 
Atta cephalotes
Leafcutter ant 
Acep\ACEP17267
 
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO13486
 
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL21254
 
Linepithema humile
Argentine ant 
Lhum\LH16924
 
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB17812
 
Solenopsis invicta
Red fire ant 
Sinv\SINV20433
 
Acyrthosiphon pisum
Pea aphid 
 
Bombyx mori
Silkmoth 
 
Pediculus humanus
Human body louse 
 
Tribolium castaneum
Red flour beetle 
 
hideOrthologs in non-Insect Arthropods (EOG67H46P)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
 
Ixodes scapularis
Deer tick 
 
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
hide Human Orthologs (0)
Gene
OMIM
HGNC
hideAAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 8 )
Bloomington
Harvard
Kyoto
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 30 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: l(3)05137 l(3)S008131
Source for merge of: poly l(3)05137
Additional comments
hide Other Comments
Identification: isolated in a mosaic screen in which posterior stau localization is disrupted in stage 9 female germ-line clones.
dsRNA made from templates generated with primers directed against this gene used in a cell-based RNAi assay to identify components or modifiers of the JAK/STAT pathway.
Lethal complementation group identified by insertion of a P{lacW} element in the 86E-87F region.
Wild type poly gene product may act as a tumour suppressor.
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Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
hide Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym
l(3)05137
 
Name Synonym
lethal (3) 05137
 
Secondary FlyBase IDs
  • FBgn0002506
  • FBgn0004732
  • FBgn0010858
  • FBgn0014374
  • FBgn0023020
  • FBgn0038141
hide References ( 34 )
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hide Recent research papers ( 2 )
Bolukbasi et al., 2012, Open Biol. 2(1): 110031
Drosophila poly suggests a novel role for the Elongator complex in insulin receptor-target of rapamycin signalling. [FBrf0218466]
Howell et al., 2012, Immunogenetics 64(2): 155--161
A directed miniscreen for genes involved in the Drosophila anti-parasitoid immune response. [FBrf0217123]
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All reviews listed in FlyBase were published before 2011