A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\jing

General Information
SymbolDmel\jingSpeciesD. melanogaster
NamejingAnnotation symbolCG9397
Feature typeprotein_coding_geneFlyBase IDFBgn0086655
Gene Model StatusCurrent Stock availability 46 publicly available
Also Known As1.28, CG9403, l(2)01094
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map42C1-42B2Sequence location2R:2,389,764..2,506,901 [+]

Genomic Maps

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modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene jing is referred to in FlyBase by the symbol Dmel\jing (CG9397, FBgn0086655). It is a protein_coding_gene from Drosophila melanogaster. It is reported to have molecular function: sequence-specific DNA binding transcription factor activity. There is experimental evidence that it is involved in the biological process: central nervous system development; border follicle cell migration; axon guidance; leg disc proximal/distal pattern formation; glial cell migration; tissue regeneration; imaginal disc-derived wing vein specification; negative regulation of transcription from RNA polymerase II promoter; specification of segmental identity, maxillary segment; open tracheal system development. 76 alleles are reported. The phenotypes of these alleles are annotated with: organ system; organ system subdivision; embryonic/larval neuron; non-connected developing system; external compound sense organ; portion of tissue; multicellular structure; adult trachea; late extended germ band embryo; adult. It has 5 annotated transcripts and 5 annotated polypeptides. Protein features are: Zinc finger, C2H2; Zinc finger, C2H2-like; Zinc finger, C2H2-type/integrase, DNA-binding. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Gene sequence location is 2R:2389764..2506901.

External Summaries
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
Insertions
References
Alleles
FB2012_01
Sequence features
Alleles
References
Insertions
Controlled Vocabulary Terms
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
42C1-42B2  
Limits computationally determined from genome sequence between P{lacW}l(2)k09848k09848&P{EP}EP407 and P{lacW}geminink14019&P{PZ}Adf101349  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
42B2-42B2  
42B-42B  
42B-42B  
42B1-42B3  
(determined by in situ hybridisation)  
42B3-42C7  
(determined by deficiency mapping, details unspecified).  
42B1-42B3  
42B-42B  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\jing for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0114365 FBtr0114362 FBtr0305958 FBtr0114364 FBtr0114363 FBtr0301636 FBpp0112911 FBpp0112914 FBpp0297100 FBpp0112912 FBpp0290850 FBpp0112913 FBti0043002 FBti0049625 FBti0069477 FBti0104243 FBti0107323 FBti0047971 FBti0124983 FBti0046149 FBti0108078 FBti0068790 FBti0030189 FBti0068486 FBti0104241 FBti0111507 FBti0028477 FBti0059008 FBti0054243 FBti0102844 FBti0107558 FBti0035251 FBti0028960 FBti0025796 FBti0001247 FBti0077110 FBti0111056 FBti0057007 FBti0037456 FBti0037452 FBti0059140 FBti0104377 FBti0105555 FBti0077108 FBti0111477 FBti0072787 FBti0027980 FBti0108472 FBti0027973 FBti0029371 FBti0010922 FBti0103152 FBti0027979 FBti0111369 FBti0109405 FBti0099953 FBti0107469 FBti0106077 FBti0035913 FBti0109831 FBti0110722 FBti0107415 FBti0108737 FBti0105542 FBti0059250 FBti0110328 FBti0035505 FBti0069819 FBti0034195 FBti0033422 FBti0106495 FBti0036935 FBti0017203 FBti0035438 FBti0077111 FBti0077109 FBti0065666 FBti0046424 FBti0051166 FBti0064940 FBti0145350 FBti0048582 FBti0045630 FBti0064765 FBti0043161 FBti0045153 FBti0129254 FBti0052863 FBti0052012 FBti0052479 FBti0067928 FBti0145259 FBti0037889 FBti0038998 FBti0050415 FBti0025184 FBti0145343 FBti0053673 FBti0047578 FBti0025119 FBti0035259 FBti0030137 FBti0057235 FBti0107180 FBti0028819 FBti0033829 FBti0067193 FBti0006865 FBti0106644 FBti0057289 FBti0028610 FBti0005178 FBti0034262 FBti0043349 FBti0035828 FBti0043515 FBti0103145 FBti0028374 FBti0036937 FBti0059518 FBti0033809 FBti0057255 FBti0026296 FBti0036494 FBti0037159 FBti0107198 FBti0023337 FBti0036047 FBti0104562 FBti0124984_2 FBti0124984_1 FBti0066868 FBti0049521 FBti0046588 FBti0111753
Comments on Gene Model
Gene merge based on EST/cDNA data (FBrf0194382).
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0114362
  2011
  217
FBtr0301636
  4810
  1486
FBtr0114363
  4989
  1582
FBtr0114364
  5103
  1486
FBtr0114365
  6139
  1744
Additional Transcript Data & Comments
Reported size (kB)
2.1 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0112911  
22.1  
217  
11.14  
FBpp0290850  
155.3  
1486  
9.83  
FBpp0112912  
165.5  
1582  
9.55  
FBpp0112913  
155.3  
1486  
9.83  
FBpp0112914  
181.2  
1744  
9.97  
Additional Polypeptide Data & Comments
Reported size (kDa)
217 (aa); 22 (kD predicted)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
 
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
protein binding site
bound_moiety=Dfd-XP
evidence=experimental
protein binding site
bound_moiety=Deaf1-XP
evidence=experimental
protein binding site
bound_moiety=Deaf1-XP
evidence=experimental
protein binding site
bound_moiety=Deaf1-XP
evidence=experimental
protein binding site
bound_moiety=Deaf1-XP
evidence=experimental
protein binding site
bound_moiety=Dfd-XP
evidence=experimental
protein binding site
bound_moiety=Dfd-XP
evidence=experimental
protein binding site
bound_moiety=Deaf1-XP
evidence=experimental
protein binding site
bound_moiety=Deaf1-XP
evidence=experimental
protein binding site
bound_moiety=Dfd-XP
evidence=experimental
protein binding site
bound_moiety=Deaf1-XP
evidence=experimental
protein binding site
bound_moiety=Deaf1-XP
evidence=experimental
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
distribution deduced from reporter
Stage
Tissue/Position (including subcellular localization)
Reference
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Dyak\1.28 transcripts are first detected in stage 11 embryos in the proctodeum and in within a cluster of cells in the posterior-lateral portion of the eighth abdominal segment. Transcripts also accumulate in the hindgut and in the developing anterior and posterior midguts. After germ band contraction, transcripts accumulate within a few cells along the posterior-mid-lateral edge of the prothoracic segment. In the maxillary lobe, expression is limited to the posterior-lateral epidermis of the lobe and is first detected in stage 12.
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view jing-RI jing-RB CG15233-RB jing-RH jing-RG jing-RD
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0086655


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0086655
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-12 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0086655 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 1618
embryo 02-04hr
 
 3247
embryo 04-06hr
 
 4178
embryo 06-08hr
 
 6659
embryo 08-10hr
 
 5883
embryo 10-12hr
 
 2938
embryo 12-14hr
 
 2830
embryo 14-16hr
 
 1934
embryo 16-18hr
 
 1160
embryo 18-20hr
 
 939
embryo 20-22hr
 
 859
embryo 22-24hr
 
 778
larva L1
 
 524
larva L2
 
 168
larva L3 12hr old
 
 170
larva L3 puffstage 1-2
 
 217
larva L3 puffstage 3-6
 
 742
larva L3 puffstage 7-9
 
 1337
white prepupae new
 
 1566
white prepupae 12hr
 
 1181
white prepupae 24hr
 
 1563
pupae 2d postWPP
 
 870
pupae 3d postWPP
 
 390
pupae 4d postWPP
 
 267
adult male 01day
 
 237
adult male 05day
 
 225
adult male 30day
 
 221
adult female 01day
 
 644
adult female 05day
 
 854
adult female 30day
 
 999
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (1618)
embryo 02-04hr
 (3247)
embryo 04-06hr
 (4178)
embryo 06-08hr
 (6659)
embryo 08-10hr
 (5883)
embryo 10-12hr
 (2938)
embryo 12-14hr
 (2830)
embryo 14-16hr
 (1934)
embryo 16-18hr
 (1160)
embryo 18-20hr
 (939)
embryo 20-22hr
 (859)
embryo 22-24hr
 (778)
larva L1
 (524)
larva L2
 (168)
larva L3 12hr old
 (170)
larva L3 puffstage 1-2
 (217)
larva L3 puffstage 3-6
 (742)
larva L3 puffstage 7-9
 (1337)
white prepupae new
 (1566)
white prepupae 12hr
 (1181)
white prepupae 24hr
 (1563)
pupae 2d postWPP
 (870)
pupae 3d postWPP
 (390)
pupae 4d postWPP
 (267)
adult male 01day
 (237)
adult male 05day
 (225)
adult male 30day
 (221)
adult female 01day
 (644)
adult female 05day
 (854)
adult female 30day
 (999)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (1618)
embryo 02-04hr
 (3247)
embryo 04-06hr
 (4178)
embryo 06-08hr
 (6659)
embryo 08-10hr
 (5883)
embryo 10-12hr
 (2938)
embryo 12-14hr
 (2830)
embryo 14-16hr
 (1934)
embryo 16-18hr
 
 1160
embryo 18-20hr
 
 939
embryo 20-22hr
 
 859
embryo 22-24hr
 
 778
larva L1
 
 524
larva L2
 
 168
larva L3 12hr old
 
 170
larva L3 puffstage 1-2
 
 217
larva L3 puffstage 3-6
 
 742
larva L3 puffstage 7-9
 
 1337
white prepupae new
 (1566)
white prepupae 12hr
 
 1181
white prepupae 24hr
 (1563)
pupae 2d postWPP
 
 870
pupae 3d postWPP
 
 390
pupae 4d postWPP
 
 267
adult male 01day
 
 237
adult male 05day
 
 225
adult male 30day
 
 221
adult female 01day
 
 644
adult female 05day
 
 854
adult female 30day
 
 999
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1618
embryo 02-04hr
 
 3247
embryo 04-06hr
 
 4178
embryo 06-08hr
 
 6659
embryo 08-10hr
 
 5883
embryo 10-12hr
 
 2938
embryo 12-14hr
 
 2830
embryo 14-16hr
 
 1934
embryo 16-18hr
 
 1160
embryo 18-20hr
 
 939
embryo 20-22hr
 
 859
embryo 22-24hr
 
 778
larva L1
 
 524
larva L2
 
 168
larva L3 12hr old
 
 170
larva L3 puffstage 1-2
 
 217
larva L3 puffstage 3-6
 
 742
larva L3 puffstage 7-9
 
 1337
white prepupae new
 
 1566
white prepupae 12hr
 
 1181
white prepupae 24hr
 
 1563
pupae 2d postWPP
 
 870
pupae 3d postWPP
 
 390
pupae 4d postWPP
 
 267
adult male 01day
 
 237
adult male 05day
 
 225
adult male 30day
 
 221
adult female 01day
 
 644
adult female 05day
 
 854
adult female 30day
 
 999
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1618
embryo 02-04hr
 
 3247
embryo 04-06hr
 
 4178
embryo 06-08hr
 
 6659
embryo 08-10hr
 
 5883
embryo 10-12hr
 
 2938
embryo 12-14hr
 
 2830
embryo 14-16hr
 
 1934
embryo 16-18hr
 
 1160
embryo 18-20hr
 
 939
embryo 20-22hr
 
 859
embryo 22-24hr
 
 778
larva L1
 
 524
larva L2
 
 168
larva L3 12hr old
 
 170
larva L3 puffstage 1-2
 
 217
larva L3 puffstage 3-6
 
 742
larva L3 puffstage 7-9
 
 1337
white prepupae new
 
 1566
white prepupae 12hr
 
 1181
white prepupae 24hr
 
 1563
pupae 2d postWPP
 
 870
pupae 3d postWPP
 
 390
pupae 4d postWPP
 
 267
adult male 01day
 
 237
adult male 05day
 
 225
adult male 30day
 
 221
adult female 01day
 
 644
adult female 05day
 
 854
adult female 30day
 
 999
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0086655 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 1618
embryo 02-04hr
 
 3247
embryo 04-06hr
 
 4178
embryo 06-08hr
 
 6659
embryo 08-10hr
 
 5883
embryo 10-12hr
 
 2938
embryo 12-14hr
 
 2830
embryo 14-16hr
 
 1934
embryo 16-18hr
 
 1160
embryo 18-20hr
 
 939
embryo 20-22hr
 
 859
embryo 22-24hr
 
 778
larva L1
 
 524
larva L2
 
 168
larva L3 12hr old
 
 170
larva L3 puffstage 1-2
 
 217
larva L3 puffstage 3-6
 
 742
larva L3 puffstage 7-9
 
 1337
white prepupae new
 
 1566
white prepupae 12hr
 
 1181
white prepupae 24hr
 
 1563
pupae 2d postWPP
 
 870
pupae 3d postWPP
 
 390
pupae 4d postWPP
 
 267
adult male 01day
 
 237
adult male 05day
 
 225
adult male 30day
 
 221
adult female 01day
 
 644
adult female 05day
 
 854
adult female 30day
 
 999
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (1618)
embryo 02-04hr
 (3247)
embryo 04-06hr
 (4178)
embryo 06-08hr
 (6659)
embryo 08-10hr
 (5883)
embryo 10-12hr
 (2938)
embryo 12-14hr
 (2830)
embryo 14-16hr
 (1934)
embryo 16-18hr
 (1160)
embryo 18-20hr
 (939)
embryo 20-22hr
 (859)
embryo 22-24hr
 (778)
larva L1
 (524)
larva L2
 (168)
larva L3 12hr old
 (170)
larva L3 puffstage 1-2
 (217)
larva L3 puffstage 3-6
 (742)
larva L3 puffstage 7-9
 (1337)
white prepupae new
 (1566)
white prepupae 12hr
 (1181)
white prepupae 24hr
 (1563)
pupae 2d postWPP
 (870)
pupae 3d postWPP
 (390)
pupae 4d postWPP
 (267)
adult male 01day
 (237)
adult male 05day
 (225)
adult male 30day
 (221)
adult female 01day
 (644)
adult female 05day
 (854)
adult female 30day
 (999)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 1618
embryo 02-04hr
 (3247)
embryo 04-06hr
 (4178)
embryo 06-08hr
 (6659)
embryo 08-10hr
 (5883)
embryo 10-12hr
 (2938)
embryo 12-14hr
 (2830)
embryo 14-16hr
 1934
embryo 16-18hr
 
 1160
embryo 18-20hr
 
 939
embryo 20-22hr
 
 859
embryo 22-24hr
 
 778
larva L1
 
 524
larva L2
 
 168
larva L3 12hr old
 
 170
larva L3 puffstage 1-2
 
 217
larva L3 puffstage 3-6
 
 742
larva L3 puffstage 7-9
 
 1337
white prepupae new
 1566
white prepupae 12hr
 
 1181
white prepupae 24hr
 1563
pupae 2d postWPP
 
 870
pupae 3d postWPP
 
 390
pupae 4d postWPP
 
 267
adult male 01day
 
 237
adult male 05day
 
 225
adult male 30day
 
 221
adult female 01day
 
 644
adult female 05day
 
 854
adult female 30day
 
 999
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1618
embryo 02-04hr
 
 3247
embryo 04-06hr
 
 4178
embryo 06-08hr
 
 6659
embryo 08-10hr
 
 5883
embryo 10-12hr
 
 2938
embryo 12-14hr
 
 2830
embryo 14-16hr
 
 1934
embryo 16-18hr
 
 1160
embryo 18-20hr
 
 939
embryo 20-22hr
 
 859
embryo 22-24hr
 
 778
larva L1
 
 524
larva L2
 
 168
larva L3 12hr old
 
 170
larva L3 puffstage 1-2
 
 217
larva L3 puffstage 3-6
 
 742
larva L3 puffstage 7-9
 
 1337
white prepupae new
 
 1566
white prepupae 12hr
 
 1181
white prepupae 24hr
 
 1563
pupae 2d postWPP
 
 870
pupae 3d postWPP
 
 390
pupae 4d postWPP
 
 267
adult male 01day
 
 237
adult male 05day
 
 225
adult male 30day
 
 221
adult female 01day
 
 644
adult female 05day
 
 854
adult female 30day
 
 999
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1618
embryo 02-04hr
 
 3247
embryo 04-06hr
 
 4178
embryo 06-08hr
 
 6659
embryo 08-10hr
 
 5883
embryo 10-12hr
 
 2938
embryo 12-14hr
 
 2830
embryo 14-16hr
 
 1934
embryo 16-18hr
 
 1160
embryo 18-20hr
 
 939
embryo 20-22hr
 
 859
embryo 22-24hr
 
 778
larva L1
 
 524
larva L2
 
 168
larva L3 12hr old
 
 170
larva L3 puffstage 1-2
 
 217
larva L3 puffstage 3-6
 
 742
larva L3 puffstage 7-9
 
 1337
white prepupae new
 
 1566
white prepupae 12hr
 
 1181
white prepupae 24hr
 
 1563
pupae 2d postWPP
 
 870
pupae 3d postWPP
 
 390
pupae 4d postWPP
 
 267
adult male 01day
 
 237
adult male 05day
 
 225
adult male 30day
 
 221
adult female 01day
 
 644
adult female 05day
 
 854
adult female 30day
 
 999
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0086655


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Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0086655
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Heatmap
Tissue   Expression Level
Larval Central Nervous System no informative data
Larval Midgut
 
 
Larval Hindgut no informative data
Larval Malpighian Tubules
 
 
Larval Fat Body no informative data
Larval Salivary Gland
 
 
Larval Trachea no informative data
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain no informative data
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut no informative data
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary no informative data
Adult Testis no informative data
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
commissure & growth cone
femur & bract | somatic clone
hide Classical Alleles ( 65 )
For All Classical Alleles Show

Allele of jingClassMutagenStocksKnown lesion
jingk034042 --
jingKG01549
2 --
jing010941 --
jing5-HA-1050
1 --
jing5-SZ-3535
1 --
jingc00429
1 --
jingc04920
1 --
jingc05964
1 --
jingC236
1 --
jingCB-5055-3
1 --
jingCB-5493-3
1 --
jingCB-5865-3
1 --
jingd11151
1 --
jingd11284
1 --
jinge00429
1 --
jinge02223
1 --
jinge03962
1 --
jingEY01292
1 --
jingEY10196
1 --
jingf02133
1 --
jingf03328
1 --
jingf04824
1 --
jingf05621a
1 --
jingf05645
1 --
jingf06286
1 --
jingf07736
1 --
jingk020021 --
jingk053111 --
jingk103141 --
jingk167051 --
jingKG10537
1 --
jingMI00243
1 --
jingMI03555
1 --
jingNP0652
1 --
jingNP0674
1 --
jingNP1195
1 --
jingNP3230
1 --
jingNP4224
1 --
jingNP4612
1 --
jingNP5276
1 --
jingNP6322
1 --
jingNP7009
1 --
jing071110 --
jing071120 --
jing10 Yes
jing22F30 Yes
jing20 --
jing31E60 --
jing30 --
jing47H60 --
jingc00337
0 --
jingc01265
0 --
jingGS2136
0 Yes
jingGS7350
0 Yes
jingGS7386
0 Yes
jingGS9070
0 Yes
jingk02102a0 --
jingk103230 --
jingMI01653
0 --
jingMI02172
0 --
jingP0 Yes
jingrev0 --
jingrH6230 --
jingrv130 Yes
jingunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 11 )
For All Alleles Carried on Transgenic Constructs Show

Allele of jingClassMutagenStocksKnown lesion
jingHMS014931 Yes
jingJF023451 Yes
jingdsRNA.Scer\UAS.WIZ0 Yes
jingGD142090 Yes
jingGD43640 Yes
jinghs.PL0 Yes
jingScer\UAS.cCa0 Yes
jingScer\UAS.cSa0 Yes
jingZnf.E1A.Scer\UAS.T:Uuuu\nls6,T:Hsap\MYC,T:Adeno5\E1a0 Yes
jingZnf.EnR.Scer\UAS.T:Uuuu\nls6,T:Hsap\MYC,T:en-Rep0 Yes
jingZnf.Scer\UAS.T:Uuuu\nls6,T:Hsap\MYC0 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
heat-shock construct
reporter construct
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 15 unique terms )
hide Terms Based on Experimental Evidence ( 11 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from expression pattern AND inferred from genetic interaction with Dfd
inferred from mutant phenotype
(assigned by UniProtKB)
Cellular Component
CV term
References
inferred from direct assay AND inferred from sequence or structural similarity with ci AND inferred from sequence or structural similarity with mouse Aebp2
hide Terms Based on Predictions or Assertions ( 5 terms )
Molecular Function
CV term
References
Biological Process
CV term
References
Cellular Component
CV term
References
non-traceable author statement
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
jing allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 46 )
Harvard
hide Genomic Clones ( 3 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 73 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
The gene is named "jing" (meaning "still") as it is required for the transition of border cells from a stationary state to a motile state.
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: jing 1.28
Source for merge of: jing l(2)22F3 l(2)01094 rhumba
Additional comments
"1.28" may correspond to "Scim21". Sequence analysis off ends of P{SUPor-P} in Scim insertion mutant places "Scim21" near/in "1.28".
hide Other Comments
The jing and Egfr pathways are functionally related in the embryonic central nervous system midline and trachea.
jing is a mediator of cellular differentiation in the central nervous system and tracheal system.
jing is required for embryonic brain development.
jing is required for the initiation of border cell migration.
jing is required for the transition of border cells from a stationary state to a motile state during oogenesis. jing appears to act downstream of slbo.
Mutants isolated in a screen of the second chromosome identifying genes affecting disc morphology.
The 1.28 gene is directly activated by Dfd in the maxillary segment but not in the mandibular segment. Four Dfd-product binding sites have been identified within a 664bp fragment of the 1.28 regulatory region, in addition to a Dfd epidermal autoactivation element (DEAE).
Identified in an enhancer trap screen for target genes of homeoproteins. The 1.28 gene is a target gene that is activated by Dfd. Dfd is required to activate 1.28 in the maxillary segment, but ectopic expression of Dfd is incapable of activating 1.28 elsewhere.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
REDfly - A database of transcriptional regulatory elements.
hide Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym
Name Synonym
1.28
 
deformed
Secondary FlyBase IDs
  • FBan0009403
  • FBgn0010347
  • FBgn0010475
  • FBgn0026656
  • FBgn0033077
  • FBgn0041145
hide References ( 80 )
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List References by type
hide Recent research papers ( 4 )
Carreira et al., 2011, BMC Dev. Biol. 11: 32
Genetic basis of wing morphogenesis in Drosophila: sexual dimorphism and non-allometric effects of shape variation. [FBrf0214273]
Morozova et al., 2010, Dev. Genes Evol. 220(7-8): 191--206
The Drosophila jing gene is a downstream target in the Trachealess/Tango tracheal pathway. [FBrf0214147]
Reis et al., 2010, PLoS Genet. 6(11): e1001206
A buoyancy-based screen of Drosophila larvae for fat-storage mutants reveals a role for sir2 in coupling fat storage to nutrient availability. [FBrf0212335]
Sonnenfeld et al., 2010, Dev. Genes Evol. 220(7-8): 207--220
Drosophila Jing is part of the breathless fibroblast growth factor receptor positive feedback loop. [FBrf0214215]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2010