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Gene Dmel\cp309

General Information
Symbol	Dmel\cp309	Species	D. melanogaster
Name	cp309	Annotation symbol	CG33957
Feature type	protein_coding_gene	FlyBase ID	FBgn0086690
Gene Model Status	Current	Stock availability	12 publicly available
Also Known As	D-PLP, dplp, PACT, Plp, CG6735, CG13459, AKAP450, l(3)s2172, CG18648
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	71B2-71B4	Sequence location	3L:15,059,341..15,087,824 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene cp309 is referred to in FlyBase by the symbol Dmel\cp309 (CG33957, FBgn0086690). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: centrosome organization; embryonic morphogenesis; sensory perception of sound; microtubule nucleation; ciliary or flagellar motility. 24 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum; wing. It has 12 annotated transcripts and 12 annotated polypeptides. Protein features are: Pericentrin/AKAP-450 centrosomal targeting domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed during late pupal stages. Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at high levels in the following post-embryonic organs or tissues: adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult heart, larval/adult fat body, larval salivary gland, adult female reproductive system, adult male accessory gland, larval carcass. Gene sequence location is 3L:15059341..15087824.
User Contributed Data
	Beta version, feedback welcome
External Summaries
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 71B2-71B4   Limits computationally determined from genome sequence between P{PZ}l(3)rO220rO220 and P{EP}Tfb2EP572
Experimentally Determined Cytological Location
Cytogenetic map Notes References 71B4-71B5   (determined by in situ hybridisation)   (Spradling et al., 1999) 71B4-71B5   (determined by in situ hybridisation)   (Perrimon et al., 1996) 71B4-71B5     (BDGP Project Members, 1994-1999)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\cp309 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene merge based on sequence accession AY373570. Gene model reviewed during 5.46 Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters. Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) cp309-RC FBtr0099993  NM_001032401   3879   1109 cp309-RD FBtr0305977  NM_001259832   9110   2767 cp309-RF FBtr0305979  NM_001032402   9494   2895 cp309-RG FBtr0333939  NM_001274930   9335   2891 cp309-RH FBtr0333940  NM_001274931   6175   1757 cp309-RJ FBtr0333941  NM_001274932   9281   2666 cp309-RK FBtr0333942  NM_001274933   9302   2831 cp309-RL FBtr0333943  NM_001274934   9326   2839 cp309-RM FBtr0333944  NM_001274935   9065   2594 cp309-RN FBtr0333945  NM_001274936   9233   2650 cp309-RO FBtr0333946  NM_001274937   6007   1701 cp309-RP FBtr0333947  NM_001259833   9473   2730
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein cp309-PC   FBpp0099787   126.6   1109   6.30     NP_001027573   AAZ83990 cp309-PD   FBpp0297119   312.4   2767   4.62     NP_001246761   AFH04432 cp309-PF   FBpp0297121   327.3   2895   4.59     NP_001027574   AAZ83989 cp309-PG   FBpp0306064   326.6   2891   4.60     NP_001261859   AGB94552 cp309-PH   FBpp0306065   200.4   1757   5.41     NP_001261860   AGB94553 cp309-PJ   FBpp0306066   302.1   2666   4.62     NP_001261861   AGB94554 cp309-PK   FBpp0306067   320.1   2831   4.64     NP_001261862   AGB94555 cp309-PL   FBpp0306068   320.5   2839   4.59     NP_001261863   AGB94556 cp309-PM   FBpp0306069   293.9   2594   4.66     NP_001261864   AGB94557 cp309-PN   FBpp0306070   300.7   2650   4.66     NP_001261865   AGB94558 cp309-PO   FBpp0306071   193.6   1701   5.52     NP_001261866   AGB94559 cp309-PP   FBpp0306072   309.8   2730   4.65     NP_001246762   AFH04433
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Pericentrin/AKAP-450 centrosomal targeting domain (IPR019528)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA817035   AE014296 AAZ83989   AE014296 AAZ83990   AE014296 AFH04432   AE014296 AFH04433   AE014296 AGB94552   AE014296 AGB94553   AE014296 AGB94554   AE014296 AGB94555   AE014296 AGB94556   AE014296 AGB94557   AE014296 AGB94558   AE014296 AGB94559   AI257628   AI532646   AI544437   AQ034107   AW944349   AY069802 AAL39947   AY373570 AAR20251   BG638288   BI370003   BI638985   CO176843   CO188368   CO188814   CO264693   CO266950   CO284865   CO286964   CO293347   CO297901   CO303658   CO304415   CO304606   CO312746   CO316753   CO321488   CO326084   CO335668   CO336786   CO342082   CO343962   EC052285   EC052824   EC053809   EC054269   EC055170   EC060982   EC062418   EC065614   EC065615   EC069593   EC073086   EC202743   EC217345   EC222772   EC223375   EC224280   EC225658   EC228828   EC237594   EC237680   EC247142   EC256242   EC265122   EC266786   ES690866   ES690868   ES690871   ES690873   ES690874   ES690876   EY198903   GH747703   GH752557   GH753186   GH757502   GH757558   GH759667   GH760488   GH773382   GH775047   GH776700   GH778169   GH778827   GH780407   GH781694   GH783388   GH788751   GH789669   GH792209   GH793904   GH794482   GH796986   GH800409   GH801504   GH802408   GH802582   GH805317   GH810474   GH812824   GH820356   GH821594   GH822659   GH823832   GH825407   GH825932   GH828943   GH829117   GH829336   GH829877   GH835262   GH837359   GH837386   GH837728   GH837969   GH846199   GH847101   GH848676   GH850422   GH851682   GH854224   GH856286   GH860777   GH861277   GH862617   GH864661   GH865065   GH865244   GH866086   GH868596   GH869821   GH870276   GH871855   GH872095   GH873019   GH875952   GH878968   GH883085   GH885040   GH887753   GH890584   GH891592   GH892681   GH893159   GH893996   GH894346   GH894978   GH896637   GH903573   GH905987   GH908793   GH914107   GH914112   GH914522   GH915130   GH916750   GH916869   GH918993   GH919049   GH920231   GH921511   GH922953   GH923819   GH926555   GH927991   GH929377   GH930881   GH931211   GH934038   GH940384
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q400N1 Q400N2 Q8T9E5 Q6UBD8
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 5   epithelial cell   • centrosome & spindle microtubule (Lecuyer et al., 2007) epithelium   • centrosome & spindle microtubule (Lecuyer et al., 2007)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 5 of adulthood & male -- day 7 of adulthood & male   spermatozoon   (Wasbrough et al., 2010)
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
centriole inferred from direct assay (Conduit and Raff, 2010)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at high levels in the following post-embryonic organs or tissues: adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult heart, larval/adult fat body, larval salivary gland, adult female reproductive system, adult male accessory gland, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    9 central nervous system, larvae L3    21 central nervous system, pupae P8    32 head, virgin 1-day female    15 head, virgin 4-day female    20 head, virgin 20-day female    19 head, mated 1-day female    17 head, mated 4-day female    15 head, mated 20-day female    17 head, mated 1-day male    23 head, mated 4-day male    19 head, mated 20-day male    25 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    7 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    2 digestive system, 4-day adult    4 digestive system, 20-day adult    3 fat body, larvae L3 wandering    11 fat body, white prepupae    70 fat body, pupae P8    19 carcass, larvae L3 wandering    19 carcass, 1-day adult    34 carcass, 4-day adult    23 carcass, 20-day adult    25 ovary, virgin 4-day female    9 ovary, mated 4-day female    9 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    9 central nervous system, larvae L3    21 central nervous system, pupae P8  (32) head, virgin 1-day female    15 head, virgin 4-day female    20 head, virgin 20-day female    19 head, mated 1-day female    17 head, mated 4-day female    15 head, mated 20-day female    17 head, mated 1-day male    23 head, mated 4-day male    19 head, mated 20-day male    25 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    7 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    2 digestive system, 4-day adult    4 digestive system, 20-day adult    3 fat body, larvae L3 wandering    11 fat body, white prepupae  (70) fat body, pupae P8    19 carcass, larvae L3 wandering    19 carcass, 1-day adult  (34) carcass, 4-day adult    23 carcass, 20-day adult    25 ovary, virgin 4-day female    9 ovary, mated 4-day female    9 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    9 central nervous system, larvae L3    21 central nervous system, pupae P8    32 head, virgin 1-day female    15 head, virgin 4-day female    20 head, virgin 20-day female    19 head, mated 1-day female    17 head, mated 4-day female    15 head, mated 20-day female    17 head, mated 1-day male    23 head, mated 4-day male    19 head, mated 20-day male    25 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    7 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    2 digestive system, 4-day adult    4 digestive system, 20-day adult    3 fat body, larvae L3 wandering    11 fat body, white prepupae    70 fat body, pupae P8    19 carcass, larvae L3 wandering    19 carcass, 1-day adult    34 carcass, 4-day adult    23 carcass, 20-day adult    25 ovary, virgin 4-day female    9 ovary, mated 4-day female    9 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    9 central nervous system, larvae L3    21 central nervous system, pupae P8    32 head, virgin 1-day female    15 head, virgin 4-day female    20 head, virgin 20-day female    19 head, mated 1-day female    17 head, mated 4-day female    15 head, mated 20-day female    17 head, mated 1-day male    23 head, mated 4-day male    19 head, mated 20-day male    25 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    7 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    2 digestive system, 4-day adult    4 digestive system, 20-day adult    3 fat body, larvae L3 wandering    11 fat body, white prepupae    70 fat body, pupae P8    19 carcass, larvae L3 wandering    19 carcass, 1-day adult    34 carcass, 4-day adult    23 carcass, 20-day adult    25 ovary, virgin 4-day female    9 ovary, mated 4-day female    9 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    9 central nervous system, larvae L3    21 central nervous system, pupae P8    32 head, virgin 1-day female    15 head, virgin 4-day female    20 head, virgin 20-day female    19 head, mated 1-day female    17 head, mated 4-day female    15 head, mated 20-day female    17 head, mated 1-day male    23 head, mated 4-day male    19 head, mated 20-day male    25 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    7 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    2 digestive system, 4-day adult    4 digestive system, 20-day adult    3 fat body, larvae L3 wandering    11 fat body, white prepupae    70 fat body, pupae P8    19 carcass, larvae L3 wandering    19 carcass, 1-day adult    34 carcass, 4-day adult    23 carcass, 20-day adult    25 ovary, virgin 4-day female    9 ovary, mated 4-day female    9 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    9 central nervous system, larvae L3    21 central nervous system, pupae P8  32 head, virgin 1-day female    15 head, virgin 4-day female    20 head, virgin 20-day female    19 head, mated 1-day female    17 head, mated 4-day female    15 head, mated 20-day female    17 head, mated 1-day male    23 head, mated 4-day male    19 head, mated 20-day male    25 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    7 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    2 digestive system, 4-day adult    4 digestive system, 20-day adult    3 fat body, larvae L3 wandering    11 fat body, white prepupae  (70) fat body, pupae P8    19 carcass, larvae L3 wandering    19 carcass, 1-day adult  (34) carcass, 4-day adult    23 carcass, 20-day adult    25 ovary, virgin 4-day female    9 ovary, mated 4-day female    9 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    9 central nervous system, larvae L3    21 central nervous system, pupae P8    32 head, virgin 1-day female    15 head, virgin 4-day female    20 head, virgin 20-day female    19 head, mated 1-day female    17 head, mated 4-day female    15 head, mated 20-day female    17 head, mated 1-day male    23 head, mated 4-day male    19 head, mated 20-day male    25 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    7 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    2 digestive system, 4-day adult    4 digestive system, 20-day adult    3 fat body, larvae L3 wandering    11 fat body, white prepupae    70 fat body, pupae P8    19 carcass, larvae L3 wandering    19 carcass, 1-day adult    34 carcass, 4-day adult    23 carcass, 20-day adult    25 ovary, virgin 4-day female    9 ovary, mated 4-day female    9 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    9 central nervous system, larvae L3    21 central nervous system, pupae P8    32 head, virgin 1-day female    15 head, virgin 4-day female    20 head, virgin 20-day female    19 head, mated 1-day female    17 head, mated 4-day female    15 head, mated 20-day female    17 head, mated 1-day male    23 head, mated 4-day male    19 head, mated 20-day male    25 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    7 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    2 digestive system, 4-day adult    4 digestive system, 20-day adult    3 fat body, larvae L3 wandering    11 fat body, white prepupae    70 fat body, pupae P8    19 carcass, larvae L3 wandering    19 carcass, 1-day adult    34 carcass, 4-day adult    23 carcass, 20-day adult    25 ovary, virgin 4-day female    9 ovary, mated 4-day female    9 testis, mated 4-day male    1 accessory gland, mated 4-day male    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed during late pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    19 embryo 04-06hr    16 embryo 06-08hr    26 embryo 08-10hr    32 embryo 10-12hr    25 embryo 12-14hr    39 embryo 14-16hr    26 embryo 16-18hr    22 embryo 18-20hr    18 embryo 20-22hr    15 embryo 22-24hr    16 larva L1    8 larva L2    6 larva L3 12hr old    6 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    9 larva L3 puffstage 7-9    15 white prepupae new    22 white prepupae 12hr    23 white prepupae 24hr    25 pupae 2d postWPP    31 pupae 3d postWPP    93 pupae 4d postWPP    57 adult male 01day    39 adult male 05day    16 adult male 30day    11 adult female 01day    26 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    19 embryo 04-06hr    16 embryo 06-08hr  26 embryo 08-10hr  (32) embryo 10-12hr    25 embryo 12-14hr  (39) embryo 14-16hr  26 embryo 16-18hr    22 embryo 18-20hr    18 embryo 20-22hr    15 embryo 22-24hr    16 larva L1    8 larva L2    6 larva L3 12hr old    6 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    9 larva L3 puffstage 7-9    15 white prepupae new    22 white prepupae 12hr    23 white prepupae 24hr    25 pupae 2d postWPP  (31) pupae 3d postWPP  (93) pupae 4d postWPP  (57) adult male 01day  (39) adult male 05day    16 adult male 30day    11 adult female 01day  26 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    19 embryo 04-06hr    16 embryo 06-08hr    26 embryo 08-10hr    32 embryo 10-12hr    25 embryo 12-14hr    39 embryo 14-16hr    26 embryo 16-18hr    22 embryo 18-20hr    18 embryo 20-22hr    15 embryo 22-24hr    16 larva L1    8 larva L2    6 larva L3 12hr old    6 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    9 larva L3 puffstage 7-9    15 white prepupae new    22 white prepupae 12hr    23 white prepupae 24hr    25 pupae 2d postWPP    31 pupae 3d postWPP    93 pupae 4d postWPP    57 adult male 01day    39 adult male 05day    16 adult male 30day    11 adult female 01day    26 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    19 embryo 04-06hr    16 embryo 06-08hr    26 embryo 08-10hr    32 embryo 10-12hr    25 embryo 12-14hr    39 embryo 14-16hr    26 embryo 16-18hr    22 embryo 18-20hr    18 embryo 20-22hr    15 embryo 22-24hr    16 larva L1    8 larva L2    6 larva L3 12hr old    6 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    9 larva L3 puffstage 7-9    15 white prepupae new    22 white prepupae 12hr    23 white prepupae 24hr    25 pupae 2d postWPP    31 pupae 3d postWPP    93 pupae 4d postWPP    57 adult male 01day    39 adult male 05day    16 adult male 30day    11 adult female 01day    26 adult female 05day    13 adult female 30day    12 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    19 embryo 04-06hr    16 embryo 06-08hr    26 embryo 08-10hr    32 embryo 10-12hr    25 embryo 12-14hr    39 embryo 14-16hr    26 embryo 16-18hr    22 embryo 18-20hr    18 embryo 20-22hr    15 embryo 22-24hr    16 larva L1    8 larva L2    6 larva L3 12hr old    6 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    9 larva L3 puffstage 7-9    15 white prepupae new    22 white prepupae 12hr    23 white prepupae 24hr    25 pupae 2d postWPP    31 pupae 3d postWPP    93 pupae 4d postWPP    57 adult male 01day    39 adult male 05day    16 adult male 30day    11 adult female 01day    26 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    19 embryo 04-06hr    16 embryo 06-08hr  26 embryo 08-10hr  32 embryo 10-12hr    25 embryo 12-14hr  (39) embryo 14-16hr  26 embryo 16-18hr    22 embryo 18-20hr    18 embryo 20-22hr    15 embryo 22-24hr    16 larva L1    8 larva L2    6 larva L3 12hr old    6 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    9 larva L3 puffstage 7-9    15 white prepupae new    22 white prepupae 12hr    23 white prepupae 24hr    25 pupae 2d postWPP  31 pupae 3d postWPP  (93) pupae 4d postWPP  (57) adult male 01day  (39) adult male 05day    16 adult male 30day    11 adult female 01day  26 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    19 embryo 04-06hr    16 embryo 06-08hr    26 embryo 08-10hr    32 embryo 10-12hr    25 embryo 12-14hr    39 embryo 14-16hr    26 embryo 16-18hr    22 embryo 18-20hr    18 embryo 20-22hr    15 embryo 22-24hr    16 larva L1    8 larva L2    6 larva L3 12hr old    6 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    9 larva L3 puffstage 7-9    15 white prepupae new    22 white prepupae 12hr    23 white prepupae 24hr    25 pupae 2d postWPP    31 pupae 3d postWPP    93 pupae 4d postWPP    57 adult male 01day    39 adult male 05day    16 adult male 30day    11 adult female 01day    26 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    12 embryo 02-04hr    19 embryo 04-06hr    16 embryo 06-08hr    26 embryo 08-10hr    32 embryo 10-12hr    25 embryo 12-14hr    39 embryo 14-16hr    26 embryo 16-18hr    22 embryo 18-20hr    18 embryo 20-22hr    15 embryo 22-24hr    16 larva L1    8 larva L2    6 larva L3 12hr old    6 larva L3 puffstage 1-2    4 larva L3 puffstage 3-6    9 larva L3 puffstage 7-9    15 white prepupae new    22 white prepupae 12hr    23 white prepupae 24hr    25 pupae 2d postWPP    31 pupae 3d postWPP    93 pupae 4d postWPP    57 adult male 01day    39 adult male 05day    16 adult male 30day    11 adult female 01day    26 adult female 05day    13 adult female 30day    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    21 Schneider line 2 Sg4    13 embryonic 1182-4H    51 embryonic GM2    15 embryonic Kc167    16 embryonic S1    14 embryonic S3    68 leg disc CME L1    23 wing disc CME-W2    19 wing disc ML-DmD8    28 wing disc ML-DmD9    43 wing disc ML-DmD16-c3    46 wing disc ML-DmD21    6 wing disc ML-DmD32    56 haltere disc ML-DmD17-c3    44 eye-antennal disc ML-DmD11    122 antennal disc ML-DmD20-c5    19 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    77 CNS ML-DmBG2-c2    42 tumorous blood cells mbn2    22 ovary fGS/OSS    15 ovary OSC    20 ovary OSS    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    21 Schneider line 2 Sg4    13 embryonic 1182-4H  (51) embryonic GM2    15 embryonic Kc167    16 embryonic S1    14 embryonic S3  (68) leg disc CME L1    23 wing disc CME-W2    19 wing disc ML-DmD8  (28) wing disc ML-DmD9  (43) wing disc ML-DmD16-c3  (46) wing disc ML-DmD21    6 wing disc ML-DmD32  (56) haltere disc ML-DmD17-c3  (44) eye-antennal disc ML-DmD11  (122) antennal disc ML-DmD20-c5    19 mixed discs ML-DmD4-c1  (69) CNS ML-DmBG1-c1  (77) CNS ML-DmBG2-c2  (42) tumorous blood cells mbn2    22 ovary fGS/OSS    15 ovary OSC    20 ovary OSS    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    21 Schneider line 2 Sg4    13 embryonic 1182-4H    51 embryonic GM2    15 embryonic Kc167    16 embryonic S1    14 embryonic S3    68 leg disc CME L1    23 wing disc CME-W2    19 wing disc ML-DmD8    28 wing disc ML-DmD9    43 wing disc ML-DmD16-c3    46 wing disc ML-DmD21    6 wing disc ML-DmD32    56 haltere disc ML-DmD17-c3    44 eye-antennal disc ML-DmD11  (122) antennal disc ML-DmD20-c5    19 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    77 CNS ML-DmBG2-c2    42 tumorous blood cells mbn2    22 ovary fGS/OSS    15 ovary OSC    20 ovary OSS    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    21 Schneider line 2 Sg4    13 embryonic 1182-4H    51 embryonic GM2    15 embryonic Kc167    16 embryonic S1    14 embryonic S3    68 leg disc CME L1    23 wing disc CME-W2    19 wing disc ML-DmD8    28 wing disc ML-DmD9    43 wing disc ML-DmD16-c3    46 wing disc ML-DmD21    6 wing disc ML-DmD32    56 haltere disc ML-DmD17-c3    44 eye-antennal disc ML-DmD11    122 antennal disc ML-DmD20-c5    19 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    77 CNS ML-DmBG2-c2    42 tumorous blood cells mbn2    22 ovary fGS/OSS    15 ovary OSC    20 ovary OSS    12 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    21 Schneider line 2 Sg4    13 embryonic 1182-4H    51 embryonic GM2    15 embryonic Kc167    16 embryonic S1    14 embryonic S3    68 leg disc CME L1    23 wing disc CME-W2    19 wing disc ML-DmD8    28 wing disc ML-DmD9    43 wing disc ML-DmD16-c3    46 wing disc ML-DmD21    6 wing disc ML-DmD32    56 haltere disc ML-DmD17-c3    44 eye-antennal disc ML-DmD11    122 antennal disc ML-DmD20-c5    19 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    77 CNS ML-DmBG2-c2    42 tumorous blood cells mbn2    22 ovary fGS/OSS    15 ovary OSC    20 ovary OSS    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    21 Schneider line 2 Sg4    13 embryonic 1182-4H  (51) embryonic GM2    15 embryonic Kc167    16 embryonic S1    14 embryonic S3  (68) leg disc CME L1    23 wing disc CME-W2    19 wing disc ML-DmD8  28 wing disc ML-DmD9  (43) wing disc ML-DmD16-c3  (46) wing disc ML-DmD21    6 wing disc ML-DmD32  (56) haltere disc ML-DmD17-c3  (44) eye-antennal disc ML-DmD11  (122) antennal disc ML-DmD20-c5    19 mixed discs ML-DmD4-c1  (69) CNS ML-DmBG1-c1  (77) CNS ML-DmBG2-c2  (42) tumorous blood cells mbn2    22 ovary fGS/OSS    15 ovary OSC    20 ovary OSS    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    21 Schneider line 2 Sg4    13 embryonic 1182-4H    51 embryonic GM2    15 embryonic Kc167    16 embryonic S1    14 embryonic S3    68 leg disc CME L1    23 wing disc CME-W2    19 wing disc ML-DmD8    28 wing disc ML-DmD9    43 wing disc ML-DmD16-c3    46 wing disc ML-DmD21    6 wing disc ML-DmD32    56 haltere disc ML-DmD17-c3    44 eye-antennal disc ML-DmD11  122 antennal disc ML-DmD20-c5    19 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    77 CNS ML-DmBG2-c2    42 tumorous blood cells mbn2    22 ovary fGS/OSS    15 ovary OSC    20 ovary OSS    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    21 Schneider line 2 Sg4    13 embryonic 1182-4H    51 embryonic GM2    15 embryonic Kc167    16 embryonic S1    14 embryonic S3    68 leg disc CME L1    23 wing disc CME-W2    19 wing disc ML-DmD8    28 wing disc ML-DmD9    43 wing disc ML-DmD16-c3    46 wing disc ML-DmD21    6 wing disc ML-DmD32    56 haltere disc ML-DmD17-c3    44 eye-antennal disc ML-DmD11    122 antennal disc ML-DmD20-c5    19 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    77 CNS ML-DmBG2-c2    42 tumorous blood cells mbn2    22 ovary fGS/OSS    15 ovary OSC    20 ovary OSS    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    12 Cadmium 100 mM 48 hrs, 4-day adult    21 Copper 0.5 mM 12 hrs, larvae L3    4 Copper 15 mM 48 hrs, 4-day adult    23 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    19 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    12 Cadmium 100 mM 48 hrs, 4-day adult    21 Copper 0.5 mM 12 hrs, larvae L3    4 Copper 15 mM 48 hrs, 4-day adult    23 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    19 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    12 Cadmium 100 mM 48 hrs, 4-day adult    21 Copper 0.5 mM 12 hrs, larvae L3    4 Copper 15 mM 48 hrs, 4-day adult    23 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    19 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    12 Cadmium 100 mM 48 hrs, 4-day adult    21 Copper 0.5 mM 12 hrs, larvae L3    4 Copper 15 mM 48 hrs, 4-day adult    23 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    19 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    12 Cadmium 100 mM 48 hrs, 4-day adult    21 Copper 0.5 mM 12 hrs, larvae L3    4 Copper 15 mM 48 hrs, 4-day adult    23 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    19 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    12 Cadmium 100 mM 48 hrs, 4-day adult    21 Copper 0.5 mM 12 hrs, larvae L3    4 Copper 15 mM 48 hrs, 4-day adult    23 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    19 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    12 Cadmium 100 mM 48 hrs, 4-day adult    21 Copper 0.5 mM 12 hrs, larvae L3    4 Copper 15 mM 48 hrs, 4-day adult    23 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    19 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    4 Cadmium 50 mM 48 hrs, 4-day adult    12 Cadmium 100 mM 48 hrs, 4-day adult    21 Copper 0.5 mM 12 hrs, larvae L3    4 Copper 15 mM 48 hrs, 4-day adult    23 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    19 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    21 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_27 mE1_20_mRNA_expression_cluster_03
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0086690
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | embryonic stage | maternal effect | poor cp309s2172 lethal | larval stage | recessive cp309s2172 lethal | recessive cp309s2172 partially lethal - majority die | pupal stage, with Scer\GAL4pnr-MD237 cp309GD6120 cp309GD9625 viable, with Scer\GAL4pnr-MD237 cp309GD12021 viable (with Df(3L)Brd15) cp3095 cp309s2172 Other Phenotypes Allele auditory perception defective cp309s2172 body color defective, with Scer\GAL4pnr-MD237 cp309GD6120 uncoordinated cp309s2172 uncoordinated (with Df(3L)Brd15) cp3095 visible, with Scer\GAL4bbg-C96 cp309d03908 cp309d10223 cp309d11666 visible, with Scer\GAL4pnr-MD237 cp309GD6120 Phenotype manifest in Allele antennal sense organ & chordotonal organ cp309s2172 centrosome & larval brain cp3095 cp309s2172 embryonic head & embryonic/first instar larval cuticle | maternal effect cp309s2172 mesothoracic tergum, with Scer\GAL4pnr-MD237 cp309GD6120 primary spermatocyte & centriole cp3095 cp309s2172 primary spermatocyte & nucleus cp3095 primary spermatocyte & spindle cp3095 cp309s2172 trichogen cell, with Scer\GAL4pnr-MD237 cp309GD6120 wing, with Scer\GAL4bbg-C96 cp309d11666 cp309d10223 cp309d03908
Classical Alleles ( 10 )
For All Classical Alleles Show
Allele of cp309 Class Mutagen Stocks Known lesion cp3095 loss of function allele ethyl methanesulfonate 1 -- cp309d10223 1 -- cp309d11666 1 -- cp309EY16376 1 -- cp309MB02408 1 -- cp309s2172 P-element activity 1 -- cp309d03908 0 -- cp309d04931 0 -- cp309d08514 0 -- cp309unspecified 0 --
Alleles Carried on Transgenic Constructs ( 14 )
For All Alleles Carried on Transgenic Constructs Show
Allele of cp309 Class Mutagen Stocks Known lesion cp309GD12021 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes cp309GD6120 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes cp309GD9625 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes cp309KK104739 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes cp309KK105316 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes cp309KK106397 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes cp309C-term.Scer\UAS.T:Avic\GFP-m6 in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes cp309NIG.13459R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes cp309NIG.18648R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes cp309NIG.6735R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes cp309PACT.Scer\UAS.T:Avic\GFP-EGFP in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes cp309PACT.Ubi-p63E.T:Avic\GFP in vitro construct - coding region fusion 0 Yes cp309PACT.Ubi.T:Disc\RFP-mRFP in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes cp309Ubi.PACT.T:Zzzz\EosFP-d2 in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3L)Brd15 (Martinez-Campos et al., 2004) Df(3L)Exel6125 (Ryder, 2004.4.26) Df(3L)Exel6126 (Ryder, 2004.4.26) Df(3L)Exel6262 (Ryder, 2004.4.26) Df(3L)fz-M21 (Spradling et al., 1999, BDGP Project Members, 1994-1999)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD6120} NA P{GD9625} NA P{GD12021} NA P{KK104739} NA P{KK105316} NA P{KK106397} NA P{NIG.6735R} NA P{NIG.13459R} NA P{NIG.18648R} NA P{UAS-EGFP-cp309.PACT} NA P{UASp-GFP-cp309-cter} NA characterization construct P{Ubi-mRFP-PACT} NA P{Ubi-p63E-GFP-cp309.PACT} NA P{Ubi-PACT.d2Eos} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap P{lacW}cp309s2172 No insertion of mobile activating element P{EPgy2}cp309EY16376 NA P{XP}cp309d03908 NA P{XP}cp309d04931 NA P{XP}cp309d08514 NA P{XP}cp309d10223 NA P{XP}cp309d11666 NA insertion of enhancer trap binary system Mi{ET1}cp309MB02408 No
Gene Ontology: Function, Process & Cellular Component ( 7 unique terms )
Terms Based on Experimental Evidence ( 6 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
centrosome organization inferred from mutant phenotype (Dobbelaere et al., 2008) ciliary or flagellar motility inferred from mutant phenotype (Martinez-Campos et al., 2004) embryonic morphogenesis inferred from mutant phenotype (Perrimon et al., 1996) microtubule nucleation inferred from direct assay (Kawaguchi and Zheng, 2004) sensory perception of sound inferred from mutant phenotype (Martinez-Campos et al., 2004)
Cellular Component
CV term Evidence References
centriole inferred from direct assay (Conduit and Raff, 2010)
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
centrosome non-traceable author statement (Zheng, 2003.8.25)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions cp309 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 533979 DroID - A comprehensive database of gene and protein interactions. • FBgn0086690 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 3772382
Orthologs
OrthoDB Orthologs (29) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG612MQP Dipteran inclusive ortholog search EOG6907HW Insect inclusive ortholog search EOG6228DJ Arthropod inclusive ortholog search EOG6JSXM9 Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG612MQP)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\cp309     Drosophila simulans   Dsim\GD12579     Drosophila sechellia   Dsec\GM24507     Drosophila erecta   Dere\GG13686     Drosophila yakuba   Dyak\GE19982     Drosophila ananassae   Dana\GF10744     Drosophila pseudoobscura pseudoobscura   Dpse\GA12302     Drosophila persimilis   Dper\GL25833     Drosophila willistoni   Dwil\GK18028     Drosophila virilis   Dvir\GJ11611     Drosophila mojavensis   Dmoj\GI11357     Drosophila grimshawi   Dgri\GH16670
Orthologs in non-Drosophila Dipterans (EOG6907HW)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL006395   Anopheles gambiae Malaria mosquito  Agam\AGAP010655   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ005546
Orthologs in non-Dipteran Insects (EOG6228DJ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB41852   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG015583   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH17214   Atta cephalotes Leafcutter ant  Acep\ACEP27789   Camponotus floridanus Florida carpenter ant  Cflo\CFLO18632   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL20983   Linepithema humile Argentine ant  Lhum\LH21367   Pogonomyrmex barbatus Red harvester ant  Pbar\PB19973   Solenopsis invicta Red fire ant  Sinv\SINV25923   Acyrthosiphon pisum Pea aphid  Apim\ACYPI005379   Pediculus humanus Human body louse  Phum\PHUM333150   Tribolium castaneum Red flour beetle  Tcas\TC005464
Orthologs in non-Insect Arthropods (EOG6JSXM9)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\Tnfrsf11a   Ixodes scapularis Deer tick  Isca\ISCW014335
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
Stocks & Reagents
Stocks Listed in FlyBase ( 12 )
Bloomington	23566 w1118; Mi{ET1}cp309MB02408 12089 w1118; P{lacW}cp309s2172/TM3, Sb1 9567 ru1 cp3095 st1/TM6C, Sb1 Tb1 21206 y1 w67c23; P{EPgy2}cp309EY16376/TM3, Sb1 Ser1
Harvard	- P{XP}cp309d10223 - P{XP}cp309d11666
VDRC	v100969 P{KK106397}VIE-260B v101296 P{KK104739}VIE-260B v101645 P{KK105316}VIE-260B v14192 w1118; P{GD6120}v14192 v20667 w1118; P{GD9625}v20667 v27732 w1118; P{GD12021}v27732/CyO
Genomic Clones ( 2 )
	BACR03G06 BACR18G16 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 146 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	SD04227
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	LP06045 RE56363 SD10987 SD21404
Other clones	31316 36801 52349 53504 60661 73460 73986 107080 107684.2 120459 121940 214445.46 542607 561842 CK01.4D.C8 CK01.18B.B4 CK01.63C.H7 EC052285 EC052824 EC053809 EC054269 EC055170 EK039363 EK042044 EK051332 EK064428 EK139927 EK148017 EK167116 EK170852 EK185758 EK202626 EK229905 EK242327 EK244633 EK245252 EK265801 EN10943 EN13233 EP03215 EP13804 EP18428 LD22031 RP003004278 RP003008598 RP003050061 RP003069126 RP003090591 RP003091727 RP003103603 RP003106914 RP003120009 RP003140988 RP003141877 RP003153595 RP003154373 RP003158210 RP003167886 RP003189073 RP003195843 RP003200882 RP003209651 RP003216582 RP003216647 RP003218682 RP003229527 RP003233593 RP003235519 RP003239038 RP003240089 RP003251066 RP003251493 RP003251662 RP003251686 RP003252043 RP003258640 RP003265566 RP003268129 RP003272597 RP003275597 RP003280309 RP003282161 RP003284601 RP003284930 RP003285149 RP003296826 RP003298574 RP003302973 RP003305602 RP003310936 RP003316603 RP003334705 RP003335339 RP003336002 RP003338254 RP003342894 RP003343545 RP003344622 RP003350766 RP003351370 RP003357956 RP003378907 RP003389829 RP003398874 RP003418221 RP003437910 RP003444428 RP003453489 RP003460981 RP003462546 RP003463196 RP003472018 RP003478793 RP003491062 RP003491911 RP003497135 RP003510412 RP003517332 RP003526230 RP003526684 RP003551028 RP003572529 RP003583538 RP003596114 RP003602625 RP003605204 RP003612136 RP003613554 RP003615115 RP003624887 RP003625708 RP003627397 RP003629040 RP003641153 RP003646387 RP003650569 RP003653313 RP003659701 RP003664109 RP003681430 RP003682413
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0086690 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 3772382
Antibody Information
	polyclonal (Roque et al., 2012, Rogers et al., 2008)
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: cp309 CG13459 CG6735 (FlyBase, 1996-)
Source for database merge of	Source for merge of: cp309 l(3)s2172 (Martinez-Campos et al., 2004)
Additional comments	Annotations CG13459, CG18648 and CG6735 merged as CG33957 (which corresponds to cp309) in release 4.2 of the genome annotation. (FlyBase Genome Annotators, 2005) Source for identity of cp309 CG13459 CG6735 was sequence comparison (date:040205). (FlyBase, 1996-)
Other Comments
	cp309 is required for efficient recruitment of pericentriolar material. (Dobbelaere et al., 2008) The autosomal "FLP-DFS" technique (using the P{ovoD1-18} P{FRT(whs)} P{hsFLP} chromosomes) has been used to identify the specific maternal effect phenotype for the zygotic lethal mutation. (Perrimon et al., 1996)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_001032401 NM_001032402 NM_001259832 NM_001259833 NM_001274930 NM_001274931 NM_001274932 NM_001274933 NM_001274934 NM_001274935 NM_001274936 NM_001274937 RefSeq (Proteins) • NP_001027573 NP_001027574 NP_001246761 NP_001246762 NP_001261859 NP_001261860 NP_001261861 NP_001261862 NP_001261863 NP_001261864 NP_001261865 NP_001261866 DDBJ / EMBL / GenBank • AAF49670.1 AAF49672.2 AAF49672.3 AAF49673.1 AAL39947 AAR20251 AAZ83989 AAZ83990 AFH04432 AFH04433 AGB94552 AGB94553 AGB94554 AGB94555 AGB94556 AGB94557 AGB94558 AGB94559 AI532646 AQ034107 AW944349 AY069802 AY373570 Entrez Gene - A searchable database of RefSeq genes. • 3772382 UniProtKB/TrEMBL • Q6UBD8 Q8T9E5 Q400N1 Q400N2
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Pericentrin/AKAP-450 centrosomal targeting domain (IPR019528)
Linkouts
	BioGRID - A database of protein and genetic interactions • 533979 DroID - A comprehensive database of gene and protein interactions. • FBgn0086690 DRSC - Results from RNAi screens. • FBgn0086690 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0086690 FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0086690 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 3772382 Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution • /cytoskel/pericentrin1.htm InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 3772382 modMine - Data generated by the modENCODE project. • FBgn0086690
Synonyms & Secondary IDs ( 27 )
Reported As
Symbol Synonym	AKAP450 (Januschke et al., 2005, Rebollo et al., 2004, Gillingham and Munro, 2000) CG6735 (Martinez-Campos et al., 2004, Kawaguchi and Zheng, 2004, Gillingham and Munro, 2000, ) CG13459 (Martinez-Campos et al., 2004, Kawaguchi and Zheng, 2004, Dobbelaere et al., 2008) CG18648 (Martinez-Campos et al., 2004, Kawaguchi and Zheng, 2004, ) CG33957 (Keleman et al., 2009.8.5) cp309 (Turner et al., 2008, Müller et al., 2007, Januschke et al., 2006, Lecuyer et al., 2007, Kankel et al., 2007, Ogura et al., 2009, Wasbrough et al., 2010, Wasbrough et al., 2010, Schrider et al., 2011, Japanese National Institute of Genetics, 2012.5.21) CP309 (Kawaguchi and Zheng, 2004, Mirouse et al., 2006, Minakhina et al., 2007, Parma et al., 2007, Lewandowski et al., 2010, Leibfried et al., 2013) Cp309 (Texada et al., 2008, Przewloka et al., 2011) D-PLP (Bettencourt-Dias et al., 2005, Riparbelli and Callaini, 2011, Rodrigues-Martins et al., 2007, Martins et al., 2010, Moutinho-Pereira et al., 2009, Dobbelaere et al., 2008, Rogers et al., 2009, Rogers et al., 2008, Peel et al., 2007, Mottier-Pavie and Megraw, 2009, Anderson et al., 2009, Stevens et al., 2009, Stevens et al., 2010, Conduit et al., 2010, Riparbelli and Callaini, 2010, Gopalakrishnan et al., 2011, Basto et al., 2008, Gopalakrishnan et al., 2012) d-plp (Martinez-Campos et al., 2004, Salisbury, 2004, Jankovics and Brunner, 2006, Giansanti et al., 2008) dplp (Yamashita et al., 2007) DPLP (Mottier et al., 2008, Rusan and Peifer, 2007, Gervais et al., 2008, Enjolras et al., 2012, Januschke et al., 2011, Riparbelli et al., 2012) dPLP (Texada et al., 2008, Przewloka et al., 2011, Ma and Jarman, 2011, Venkei et al., 2012) Dplp (Delgehyr et al., 2012) l(3)s2172 (Spradling et al., 1999, Perrimon et al., 1996, BDGP Project Members, 1994-1999, ) PACT (Spradling and Zheng, 2007, Lucas and Raff, 2007, Martins et al., 2009, Cheng et al., 2008, Mottier-Pavie and Megraw, 2009, Guha et al., 2008, Blachon et al., 2009, Conduit et al., 2010, Conduit and Raff, 2010, Rodrigues-Martins et al., 2008) Plp (Castellanos et al., 2008, Basto et al., 2008, Sabino et al., 2011) PLP (Riparbelli et al., 2009, Enjolras et al., 2012, Van De Bor et al., 2011, Ahmad et al., 2012) pPlp (Castellanos et al., 2008)
Name Synonym	cp309 (Wasbrough et al., 2010) Drosophila Pericentrin Like Protein (Martins et al., 2010) lethal (3) s2172   pericentrin (Wojcik et al., 2004, Stevens et al., 2010) Pericentrin (Cachero et al., 2011) pericentrin/AKAP450 centrosomal targeting (Blachon et al., 2009) pericentrin-like (Giansanti et al., 2008, Rogers et al., 2009) pericentrin-like protein (Yamashita et al., 2007, Stevens et al., 2009, Stevens et al., 2010, Enjolras et al., 2012, Ma and Jarman, 2011) Pericentrin-like protein (Januschke et al., 2006, Jankovics and Brunner, 2006, Ahmad et al., 2012)
Secondary FlyBase IDs
	FBgn0011807 FBgn0036472 FBgn0036473 FBgn0036475 FBgn0053957
References ( 103 )
Generate a list of	All references relating to this gene ( 103 )
List References by type	Research paper  ( 75 ) Supplementary material  ( 8 ) Review  ( 2 ) Personal communication to FlyBase  ( 7 ) Abstract  ( 3 ) FlyBase analysis  ( 4 ) Stock list  ( 1 ) DNA/RNA sequence record  ( 2 ) Curated genome annotation  ( 1 )
Recent research papers ( 21 )
	Leibfried et al., 2013, Development 140(2): 362--371 A Cdc42-regulated actin cytoskeleton mediates Drosophila oocyte polarization. [FBrf0220348] Ahmad et al., 2012, Dev. Cell 23(1): 97--111 Two forkhead transcription factors regulate the division of cardiac progenitor cells by a polo-dependent pathway. [FBrf0218973] Delgehyr et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(15): 5729--5734 Drosophila Mgr, a Prefoldin subunit cooperating with von Hippel Lindau to regulate tubulin stability. [FBrf0218047] Enjolras et al., 2012, J. Cell Biol. 197(2): 313--325 Drosophila chibby is required for basal body formation and ciliogenesis but not for Wg signaling. [FBrf0218054] Fu and Glover, 2012, Open Biol. 2(8): 120104 Structured illumination of the interface between centriole and peri-centriolar material. [FBrf0219444] Gopalakrishnan et al., 2012, Nat. Cell Biol. 14(8): 865--873 Tubulin nucleotide status controls Sas-4-dependent pericentriolar material recruitment. [FBrf0219801] Krauchunas et al., 2012, Dev. Biol. 370(1): 125--134 Protein phosphorylation changes reveal new candidates in the regulation of egg activation and early embryogenesis in D. melanogaster. [FBrf0219342] Riparbelli et al., 2012, Dev. Cell 23(2): 425--432 Assembly and persistence of primary cilia in dividing Drosophila spermatocytes. [FBrf0219210] Roque et al., 2012, J. Cell Sci. 125(23): 5881--5886 Drosophila Cep135/Bld10 maintains proper centriole structure but is dispensable for cartwheel formation. [FBrf0220865] Sitaram et al., 2012, Development 139(16): 2945--2954 Regulation of dynein localization and centrosome positioning by Lis-1 and asunder during Drosophila spermatogenesis. [FBrf0219060] Venkei et al., 2012, Open Biol. 2(2): 110032 Spatiotemporal dynamics of Spc105 regulates the assembly of the Drosophila kinetochore. [FBrf0218508] Cachero et al., 2011, PLoS Biol. 9(1): e1000568 The gene regulatory cascade linking proneural specification with differentiation in Drosophila sensory neurons. [FBrf0212891] Gopalakrishnan et al., 2011, Nat. Commun. 2: 359 Sas-4 provides a scaffold for cytoplasmic complexes and tethers them in a centrosome. [FBrf0216370] Januschke et al., 2011, Nat. Commun. 2: 243 Drosophila neuroblasts retain the daughter centrosome. [FBrf0213258] Ma and Jarman, 2011, J. Cell Sci. 124(15): 2622--2630 Dilatory is a Drosophila protein related to AZI1 (CEP131) that is located at the ciliary base and required for cilium formation. [FBrf0214370] Przewloka et al., 2011, Curr. Biol. 21(5): 399--405 CENP-C Is a Structural Platform for Kinetochore Assembly. [FBrf0213151] Riparbelli and Callaini, 2011, Dev. Biol. 349(2): 427--439 Male gametogenesis without centrioles. [FBrf0212739] Sabino et al., 2011, J. Cell Sci. 124(7): 1156--1166 Drosophila Ajuba is not an Aurora-A activator but is required to maintain Aurora-A at the centrosome. [FBrf0213223] Schrider et al., 2011, Genome Res. 21(12): 2087--2095 Genome-wide analysis of retrogene polymorphisms in Drosophila melanogaster. [FBrf0216827] Van De Bor et al., 2011, Development 138(7): 1383--1393 Asymmetric localisation of cytokine mRNA is essential for JAK/STAT activation during cell invasiveness. [FBrf0213214] Yadlapalli et al., 2011, J. Cell Sci. 124(6): 933--939 Drosophila male germline stem cells do not asymmetrically segregate chromosome strands. [FBrf0213200] Show all research papers ...
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