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Gene Dmel\Pcmt

General Information
Symbol	Dmel\Pcmt	Species	D. melanogaster
Name	Protein-L-isoaspartate (D-aspartate) O-methyltransferase	Annotation symbol	CG2152
Feature type	protein_coding_gene	FlyBase ID	FBgn0086768
Gene Model Status	Current	Stock availability	12 publicly available
Also Known As	PIMT
Genomic Location
Chromosome (arm)	3R	Recombination map	3-
Cytogenetic map	101F-83B1	Sequence location	3R:1,378,545..1,380,038 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Protein-L-isoaspartate (D-aspartate) O-methyltransferase is referred to in FlyBase by the symbol Dmel\Pcmt (CG2152, FBgn0086768). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity. There is experimental evidence that it is involved in the biological process: defense response to bacterium. 7 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Protein-L-isoaspartate(D-aspartate) O-methyltransferase. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult eye, larval trachea. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, adult female reproductive system, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1626213_a_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Pcmt. Gene sequence location is 3R:1378545..1380038.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 101F-83B1   Left limit from in situ hybridisation (FBrf0085080) Right limit from in situ hybridisation (FBrf0085080); Limits computationally determined from genome sequence between P{PZ}Snr101319&P{PZ}Itp-r83A05616 and P{lacW}Atus1938
Experimentally Determined Cytological Location
Cytogenetic map Notes References 83A5-83A6     (O'Connor, 2000.1.4) 83A-83B     (O'Connor, 1995.12.21) 83A-83B   (determined by in situ hybridisation)   (O'Connor et al., 1997) 101F-102A   (determined by in situ hybridisation)   (Galus et al., 1995)
Experimentally Determined Recombination Data
Location	3- (O'Connor, 1995.12.21)
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Pcmt for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.48 Gene model reviewed during 5.43 Gene model reviewed during 5.49 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Pcmt-RA FBtr0078758  NM_080508   953   226 Pcmt-RC FBtr0339519  NM_001275358   998   203
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Pcmt-PA   FBpp0078405   24.6   226   7.23     NP_536756   AAF52012 Pcmt-PC   FBpp0308602   21.9   203   7.70     NP_001262287   AGB95670
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Protein-L-isoaspartate(D-aspartate) O-methyltransferase (IPR000682)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF52012   AE014297 AGB95670   AI064650   AI107211   AI107913   AI109342   AI135034   AI238109   AI402997   AI403979   AI405223   AY070630 AAL48101   AY075527 AAL68334   BG637203   BI354257   BI358667   BI364426   BI368372   BI371990   BI486138   BI579760   BI580301   BI608906   BI610037   BT125930   CO280326   CO283233   CO313144   CO316568   CO317412   CO317858   EC062017   EC076806   EC078105   EC078172   EC079139   EC080468   EC084781   EC225592   EL871095   EL871096   EL877608   ES690359   ES690397   ES692309   EV582699   U37432 AAA80540   U43737 AAA86272
UniProtKB/Swiss-Prot	Q27869
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 7 -- 8   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 9 -- 10   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 11 -- 12   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 13 -- 16   organism | ubiquitous   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult eye, larval trachea. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, adult female reproductive system, adult male reproductive system, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    320.925 Larval Midgut    228.4 Larval Hindgut    348.2 Larval Malpighian Tubules    459.8 Larval Fat Body    333.7 Larval Salivary Gland    247.2 Larval Trachea    520.475 Larval Carcass    392.025 Adult Head    387.1 Adult Eye    627.575 Adult Brain    305.1 Adult Thoracic-Abdominal Ganglion    315.3 Adult Crop    457.6 Adult Midgut    199.7 Adult Hindgut    368.4 Adult Malpighian Tubules    425.8 Adult Fat Body    232.7 Adult Salivary Gland    406.3 Adult Heart    368.575 Adult VirginFemale Spermatheca    263.9 Adult InseminatedFemale Spermatheca    252.2 Adult Ovary    168.6 Adult Testis    355.9 Adult Male Accessory Gland    412.5 Adult Carcass    427.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    320.925 Larval Midgut    228.4 Larval Hindgut    348.2 Larval Malpighian Tubules    459.8 Larval Fat Body    333.7 Larval Salivary Gland    247.2 Larval Trachea  520.475 Larval Carcass    392.025 Adult Head    387.1 Adult Eye  (627.575) Adult Brain    305.1 Adult Thoracic-Abdominal Ganglion    315.3 Adult Crop    457.6 Adult Midgut    199.7 Adult Hindgut    368.4 Adult Malpighian Tubules    425.8 Adult Fat Body    232.7 Adult Salivary Gland    406.3 Adult Heart    368.575 Adult VirginFemale Spermatheca    263.9 Adult InseminatedFemale Spermatheca    252.2 Adult Ovary    168.6 Adult Testis    355.9 Adult Male Accessory Gland    412.5 Adult Carcass    427.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    320.925 Larval Midgut    228.4 Larval Hindgut    348.2 Larval Malpighian Tubules    459.8 Larval Fat Body    333.7 Larval Salivary Gland    247.2 Larval Trachea    520.475 Larval Carcass    392.025 Adult Head    387.1 Adult Eye    627.575 Adult Brain    305.1 Adult Thoracic-Abdominal Ganglion    315.3 Adult Crop    457.6 Adult Midgut    199.7 Adult Hindgut    368.4 Adult Malpighian Tubules    425.8 Adult Fat Body    232.7 Adult Salivary Gland    406.3 Adult Heart    368.575 Adult VirginFemale Spermatheca    263.9 Adult InseminatedFemale Spermatheca    252.2 Adult Ovary    168.6 Adult Testis    355.9 Adult Male Accessory Gland    412.5 Adult Carcass    427.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    320.925 Larval Midgut    228.4 Larval Hindgut    348.2 Larval Malpighian Tubules    459.8 Larval Fat Body    333.7 Larval Salivary Gland    247.2 Larval Trachea    520.475 Larval Carcass    392.025 Adult Head    387.1 Adult Eye    627.575 Adult Brain    305.1 Adult Thoracic-Abdominal Ganglion    315.3 Adult Crop    457.6 Adult Midgut    199.7 Adult Hindgut    368.4 Adult Malpighian Tubules    425.8 Adult Fat Body    232.7 Adult Salivary Gland    406.3 Adult Heart    368.575 Adult VirginFemale Spermatheca    263.9 Adult InseminatedFemale Spermatheca    252.2 Adult Ovary    168.6 Adult Testis    355.9 Adult Male Accessory Gland    412.5 Adult Carcass    427.1 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    320.925 Larval Midgut    228.4 Larval Hindgut    348.2 Larval Malpighian Tubules    459.8 Larval Fat Body    333.7 Larval Salivary Gland    247.2 Larval Trachea    520.475 Larval Carcass    392.025 Adult Head    387.1 Adult Eye    627.575 Adult Brain    305.1 Adult Thoracic-Abdominal Ganglion    315.3 Adult Crop    457.6 Adult Midgut    199.7 Adult Hindgut    368.4 Adult Malpighian Tubules    425.8 Adult Fat Body    232.7 Adult Salivary Gland    406.3 Adult Heart    368.575 Adult VirginFemale Spermatheca    263.9 Adult InseminatedFemale Spermatheca    252.2 Adult Ovary    168.6 Adult Testis    355.9 Adult Male Accessory Gland    412.5 Adult Carcass    427.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    320.925 Larval Midgut    228.4 Larval Hindgut    348.2 Larval Malpighian Tubules    459.8 Larval Fat Body    333.7 Larval Salivary Gland    247.2 Larval Trachea  520.475 Larval Carcass    392.025 Adult Head    387.1 Adult Eye  627.575 Adult Brain    305.1 Adult Thoracic-Abdominal Ganglion    315.3 Adult Crop    457.6 Adult Midgut    199.7 Adult Hindgut    368.4 Adult Malpighian Tubules    425.8 Adult Fat Body    232.7 Adult Salivary Gland    406.3 Adult Heart    368.575 Adult VirginFemale Spermatheca    263.9 Adult InseminatedFemale Spermatheca    252.2 Adult Ovary    168.6 Adult Testis    355.9 Adult Male Accessory Gland    412.5 Adult Carcass    427.1 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    320.925 Larval Midgut    228.4 Larval Hindgut    348.2 Larval Malpighian Tubules    459.8 Larval Fat Body    333.7 Larval Salivary Gland    247.2 Larval Trachea    520.475 Larval Carcass    392.025 Adult Head    387.1 Adult Eye    627.575 Adult Brain    305.1 Adult Thoracic-Abdominal Ganglion    315.3 Adult Crop    457.6 Adult Midgut    199.7 Adult Hindgut    368.4 Adult Malpighian Tubules    425.8 Adult Fat Body    232.7 Adult Salivary Gland    406.3 Adult Heart    368.575 Adult VirginFemale Spermatheca    263.9 Adult InseminatedFemale Spermatheca    252.2 Adult Ovary    168.6 Adult Testis    355.9 Adult Male Accessory Gland    412.5 Adult Carcass    427.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    320.925 Larval Midgut    228.4 Larval Hindgut    348.2 Larval Malpighian Tubules    459.8 Larval Fat Body    333.7 Larval Salivary Gland    247.2 Larval Trachea    520.475 Larval Carcass    392.025 Adult Head    387.1 Adult Eye    627.575 Adult Brain    305.1 Adult Thoracic-Abdominal Ganglion    315.3 Adult Crop    457.6 Adult Midgut    199.7 Adult Hindgut    368.4 Adult Malpighian Tubules    425.8 Adult Fat Body    232.7 Adult Salivary Gland    406.3 Adult Heart    368.575 Adult VirginFemale Spermatheca    263.9 Adult InseminatedFemale Spermatheca    252.2 Adult Ovary    168.6 Adult Testis    355.9 Adult Male Accessory Gland    412.5 Adult Carcass    427.1 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    387.1   NA  Eye    627.575   NA  Brain    305.1   320.925  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    315.3   NA  Crop    457.6   228.4  Midgut    199.7   348.2  Hindgut    368.4   459.8  Malpighian Tubules    425.8   333.7  Fat Body    232.7   247.2  Salivary Gland    406.3   NA  Heart    368.575   520.475  Trachea    NA   NA  VirginFemale Spermatheca    263.9   NA  InseminatedFemale Spermatheca    252.2   NA  Ovary    168.6   NA  Testis    355.9   NA  Male Accessory Gland    412.5   392.025  Carcass    427.1 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    65 central nervous system, larvae L3    20 central nervous system, pupae P8    15 head, virgin 1-day female    14 head, virgin 4-day female    20 head, virgin 20-day female    27 head, mated 1-day female    11 head, mated 4-day female    14 head, mated 20-day female    24 head, mated 1-day male    18 head, mated 4-day male    23 head, mated 20-day male    31 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    24 digestive system, 1-day adult    18 digestive system, 4-day adult    12 digestive system, 20-day adult    17 fat body, larvae L3 wandering    11 fat body, white prepupae    14 fat body, pupae P8    46 carcass, larvae L3 wandering    27 carcass, 1-day adult    21 carcass, 4-day adult    18 carcass, 20-day adult    27 ovary, virgin 4-day female    14 ovary, mated 4-day female    12 testis, mated 4-day male    54 accessory gland, mated 4-day male    25 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (65) central nervous system, larvae L3    20 central nervous system, pupae P8    15 head, virgin 1-day female    14 head, virgin 4-day female    20 head, virgin 20-day female  (27) head, mated 1-day female    11 head, mated 4-day female    14 head, mated 20-day female    24 head, mated 1-day male    18 head, mated 4-day male    23 head, mated 20-day male  (31) salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    24 digestive system, 1-day adult    18 digestive system, 4-day adult    12 digestive system, 20-day adult    17 fat body, larvae L3 wandering    11 fat body, white prepupae    14 fat body, pupae P8  (46) carcass, larvae L3 wandering  (27) carcass, 1-day adult    21 carcass, 4-day adult    18 carcass, 20-day adult  (27) ovary, virgin 4-day female    14 ovary, mated 4-day female    12 testis, mated 4-day male  (54) accessory gland, mated 4-day male    25 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    65 central nervous system, larvae L3    20 central nervous system, pupae P8    15 head, virgin 1-day female    14 head, virgin 4-day female    20 head, virgin 20-day female    27 head, mated 1-day female    11 head, mated 4-day female    14 head, mated 20-day female    24 head, mated 1-day male    18 head, mated 4-day male    23 head, mated 20-day male    31 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    24 digestive system, 1-day adult    18 digestive system, 4-day adult    12 digestive system, 20-day adult    17 fat body, larvae L3 wandering    11 fat body, white prepupae    14 fat body, pupae P8    46 carcass, larvae L3 wandering    27 carcass, 1-day adult    21 carcass, 4-day adult    18 carcass, 20-day adult    27 ovary, virgin 4-day female    14 ovary, mated 4-day female    12 testis, mated 4-day male    54 accessory gland, mated 4-day male    25 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    65 central nervous system, larvae L3    20 central nervous system, pupae P8    15 head, virgin 1-day female    14 head, virgin 4-day female    20 head, virgin 20-day female    27 head, mated 1-day female    11 head, mated 4-day female    14 head, mated 20-day female    24 head, mated 1-day male    18 head, mated 4-day male    23 head, mated 20-day male    31 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    24 digestive system, 1-day adult    18 digestive system, 4-day adult    12 digestive system, 20-day adult    17 fat body, larvae L3 wandering    11 fat body, white prepupae    14 fat body, pupae P8    46 carcass, larvae L3 wandering    27 carcass, 1-day adult    21 carcass, 4-day adult    18 carcass, 20-day adult    27 ovary, virgin 4-day female    14 ovary, mated 4-day female    12 testis, mated 4-day male    54 accessory gland, mated 4-day male    25 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    65 central nervous system, larvae L3    20 central nervous system, pupae P8    15 head, virgin 1-day female    14 head, virgin 4-day female    20 head, virgin 20-day female    27 head, mated 1-day female    11 head, mated 4-day female    14 head, mated 20-day female    24 head, mated 1-day male    18 head, mated 4-day male    23 head, mated 20-day male    31 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    24 digestive system, 1-day adult    18 digestive system, 4-day adult    12 digestive system, 20-day adult    17 fat body, larvae L3 wandering    11 fat body, white prepupae    14 fat body, pupae P8    46 carcass, larvae L3 wandering    27 carcass, 1-day adult    21 carcass, 4-day adult    18 carcass, 20-day adult    27 ovary, virgin 4-day female    14 ovary, mated 4-day female    12 testis, mated 4-day male    54 accessory gland, mated 4-day male    25 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (65) central nervous system, larvae L3    20 central nervous system, pupae P8    15 head, virgin 1-day female    14 head, virgin 4-day female    20 head, virgin 20-day female  27 head, mated 1-day female    11 head, mated 4-day female    14 head, mated 20-day female    24 head, mated 1-day male    18 head, mated 4-day male    23 head, mated 20-day male  31 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    24 digestive system, 1-day adult    18 digestive system, 4-day adult    12 digestive system, 20-day adult    17 fat body, larvae L3 wandering    11 fat body, white prepupae    14 fat body, pupae P8  (46) carcass, larvae L3 wandering  27 carcass, 1-day adult    21 carcass, 4-day adult    18 carcass, 20-day adult  27 ovary, virgin 4-day female    14 ovary, mated 4-day female    12 testis, mated 4-day male  (54) accessory gland, mated 4-day male    25 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    65 central nervous system, larvae L3    20 central nervous system, pupae P8    15 head, virgin 1-day female    14 head, virgin 4-day female    20 head, virgin 20-day female    27 head, mated 1-day female    11 head, mated 4-day female    14 head, mated 20-day female    24 head, mated 1-day male    18 head, mated 4-day male    23 head, mated 20-day male    31 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    24 digestive system, 1-day adult    18 digestive system, 4-day adult    12 digestive system, 20-day adult    17 fat body, larvae L3 wandering    11 fat body, white prepupae    14 fat body, pupae P8    46 carcass, larvae L3 wandering    27 carcass, 1-day adult    21 carcass, 4-day adult    18 carcass, 20-day adult    27 ovary, virgin 4-day female    14 ovary, mated 4-day female    12 testis, mated 4-day male    54 accessory gland, mated 4-day male    25 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    65 central nervous system, larvae L3    20 central nervous system, pupae P8    15 head, virgin 1-day female    14 head, virgin 4-day female    20 head, virgin 20-day female    27 head, mated 1-day female    11 head, mated 4-day female    14 head, mated 20-day female    24 head, mated 1-day male    18 head, mated 4-day male    23 head, mated 20-day male    31 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    24 digestive system, 1-day adult    18 digestive system, 4-day adult    12 digestive system, 20-day adult    17 fat body, larvae L3 wandering    11 fat body, white prepupae    14 fat body, pupae P8    46 carcass, larvae L3 wandering    27 carcass, 1-day adult    21 carcass, 4-day adult    18 carcass, 20-day adult    27 ovary, virgin 4-day female    14 ovary, mated 4-day female    12 testis, mated 4-day male    54 accessory gland, mated 4-day male    25 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    44 embryo 02-04hr    67 embryo 04-06hr    60 embryo 06-08hr    54 embryo 08-10hr    51 embryo 10-12hr    58 embryo 12-14hr    33 embryo 14-16hr    34 embryo 16-18hr    27 embryo 18-20hr    23 embryo 20-22hr    23 embryo 22-24hr    19 larva L1    21 larva L2    22 larva L3 12hr old    30 larva L3 puffstage 1-2    60 larva L3 puffstage 3-6    64 larva L3 puffstage 7-9    69 white prepupae new    61 white prepupae 12hr    57 white prepupae 24hr    73 pupae 2d postWPP    58 pupae 3d postWPP    49 pupae 4d postWPP    64 adult male 01day    64 adult male 05day    84 adult male 30day    72 adult female 01day    54 adult female 05day    41 adult female 30day    40 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (44) embryo 02-04hr  (67) embryo 04-06hr  (60) embryo 06-08hr  (54) embryo 08-10hr  (51) embryo 10-12hr  (58) embryo 12-14hr  (33) embryo 14-16hr  (34) embryo 16-18hr  (27) embryo 18-20hr    23 embryo 20-22hr    23 embryo 22-24hr    19 larva L1    21 larva L2    22 larva L3 12hr old  (30) larva L3 puffstage 1-2  (60) larva L3 puffstage 3-6  (64) larva L3 puffstage 7-9  (69) white prepupae new  (61) white prepupae 12hr  (57) white prepupae 24hr  (73) pupae 2d postWPP  (58) pupae 3d postWPP  (49) pupae 4d postWPP  (64) adult male 01day  (64) adult male 05day  (84) adult male 30day  (72) adult female 01day  (54) adult female 05day  (41) adult female 30day  (40) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    44 embryo 02-04hr    67 embryo 04-06hr    60 embryo 06-08hr    54 embryo 08-10hr    51 embryo 10-12hr    58 embryo 12-14hr    33 embryo 14-16hr    34 embryo 16-18hr    27 embryo 18-20hr    23 embryo 20-22hr    23 embryo 22-24hr    19 larva L1    21 larva L2    22 larva L3 12hr old    30 larva L3 puffstage 1-2    60 larva L3 puffstage 3-6    64 larva L3 puffstage 7-9    69 white prepupae new    61 white prepupae 12hr    57 white prepupae 24hr    73 pupae 2d postWPP    58 pupae 3d postWPP    49 pupae 4d postWPP    64 adult male 01day    64 adult male 05day    84 adult male 30day    72 adult female 01day    54 adult female 05day    41 adult female 30day    40 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    44 embryo 02-04hr    67 embryo 04-06hr    60 embryo 06-08hr    54 embryo 08-10hr    51 embryo 10-12hr    58 embryo 12-14hr    33 embryo 14-16hr    34 embryo 16-18hr    27 embryo 18-20hr    23 embryo 20-22hr    23 embryo 22-24hr    19 larva L1    21 larva L2    22 larva L3 12hr old    30 larva L3 puffstage 1-2    60 larva L3 puffstage 3-6    64 larva L3 puffstage 7-9    69 white prepupae new    61 white prepupae 12hr    57 white prepupae 24hr    73 pupae 2d postWPP    58 pupae 3d postWPP    49 pupae 4d postWPP    64 adult male 01day    64 adult male 05day    84 adult male 30day    72 adult female 01day    54 adult female 05day    41 adult female 30day    40 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    44 embryo 02-04hr    67 embryo 04-06hr    60 embryo 06-08hr    54 embryo 08-10hr    51 embryo 10-12hr    58 embryo 12-14hr    33 embryo 14-16hr    34 embryo 16-18hr    27 embryo 18-20hr    23 embryo 20-22hr    23 embryo 22-24hr    19 larva L1    21 larva L2    22 larva L3 12hr old    30 larva L3 puffstage 1-2    60 larva L3 puffstage 3-6    64 larva L3 puffstage 7-9    69 white prepupae new    61 white prepupae 12hr    57 white prepupae 24hr    73 pupae 2d postWPP    58 pupae 3d postWPP    49 pupae 4d postWPP    64 adult male 01day    64 adult male 05day    84 adult male 30day    72 adult female 01day    54 adult female 05day    41 adult female 30day    40 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (44) embryo 02-04hr  (67) embryo 04-06hr  (60) embryo 06-08hr  (54) embryo 08-10hr  (51) embryo 10-12hr  (58) embryo 12-14hr  (33) embryo 14-16hr  (34) embryo 16-18hr  27 embryo 18-20hr    23 embryo 20-22hr    23 embryo 22-24hr    19 larva L1    21 larva L2    22 larva L3 12hr old  30 larva L3 puffstage 1-2  (60) larva L3 puffstage 3-6  (64) larva L3 puffstage 7-9  (69) white prepupae new  (61) white prepupae 12hr  (57) white prepupae 24hr  (73) pupae 2d postWPP  (58) pupae 3d postWPP  (49) pupae 4d postWPP  (64) adult male 01day  (64) adult male 05day  (84) adult male 30day  (72) adult female 01day  (54) adult female 05day  (41) adult female 30day  (40) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    44 embryo 02-04hr    67 embryo 04-06hr    60 embryo 06-08hr    54 embryo 08-10hr    51 embryo 10-12hr    58 embryo 12-14hr    33 embryo 14-16hr    34 embryo 16-18hr    27 embryo 18-20hr    23 embryo 20-22hr    23 embryo 22-24hr    19 larva L1    21 larva L2    22 larva L3 12hr old    30 larva L3 puffstage 1-2    60 larva L3 puffstage 3-6    64 larva L3 puffstage 7-9    69 white prepupae new    61 white prepupae 12hr    57 white prepupae 24hr    73 pupae 2d postWPP    58 pupae 3d postWPP    49 pupae 4d postWPP    64 adult male 01day    64 adult male 05day    84 adult male 30day    72 adult female 01day    54 adult female 05day    41 adult female 30day    40 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    44 embryo 02-04hr    67 embryo 04-06hr    60 embryo 06-08hr    54 embryo 08-10hr    51 embryo 10-12hr    58 embryo 12-14hr    33 embryo 14-16hr    34 embryo 16-18hr    27 embryo 18-20hr    23 embryo 20-22hr    23 embryo 22-24hr    19 larva L1    21 larva L2    22 larva L3 12hr old    30 larva L3 puffstage 1-2    60 larva L3 puffstage 3-6    64 larva L3 puffstage 7-9    69 white prepupae new    61 white prepupae 12hr    57 white prepupae 24hr    73 pupae 2d postWPP    58 pupae 3d postWPP    49 pupae 4d postWPP    64 adult male 01day    64 adult male 05day    84 adult male 30day    72 adult female 01day    54 adult female 05day    41 adult female 30day    40 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    52 Schneider line 2 Sg4    69 embryonic 1182-4H    50 embryonic GM2    37 embryonic Kc167    31 embryonic S1    50 embryonic S3    40 leg disc CME L1    50 wing disc CME-W2    41 wing disc ML-DmD8    54 wing disc ML-DmD9    73 wing disc ML-DmD16-c3    33 wing disc ML-DmD21    101 wing disc ML-DmD32    95 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    81 antennal disc ML-DmD20-c5    73 mixed discs ML-DmD4-c1    51 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    44 tumorous blood cells mbn2    35 ovary fGS/OSS    28 ovary OSC    20 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (52) Schneider line 2 Sg4  (69) embryonic 1182-4H  (50) embryonic GM2  (37) embryonic Kc167  (31) embryonic S1  (50) embryonic S3  (40) leg disc CME L1  (50) wing disc CME-W2  (41) wing disc ML-DmD8  (54) wing disc ML-DmD9  (73) wing disc ML-DmD16-c3  (33) wing disc ML-DmD21  (101) wing disc ML-DmD32  (95) haltere disc ML-DmD17-c3  (41) eye-antennal disc ML-DmD11  (81) antennal disc ML-DmD20-c5  (73) mixed discs ML-DmD4-c1  (51) CNS ML-DmBG1-c1  (40) CNS ML-DmBG2-c2  (44) tumorous blood cells mbn2  (35) ovary fGS/OSS  (28) ovary OSC    20 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    52 Schneider line 2 Sg4    69 embryonic 1182-4H    50 embryonic GM2    37 embryonic Kc167    31 embryonic S1    50 embryonic S3    40 leg disc CME L1    50 wing disc CME-W2    41 wing disc ML-DmD8    54 wing disc ML-DmD9    73 wing disc ML-DmD16-c3    33 wing disc ML-DmD21  101 wing disc ML-DmD32    95 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    81 antennal disc ML-DmD20-c5    73 mixed discs ML-DmD4-c1    51 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    44 tumorous blood cells mbn2    35 ovary fGS/OSS    28 ovary OSC    20 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    52 Schneider line 2 Sg4    69 embryonic 1182-4H    50 embryonic GM2    37 embryonic Kc167    31 embryonic S1    50 embryonic S3    40 leg disc CME L1    50 wing disc CME-W2    41 wing disc ML-DmD8    54 wing disc ML-DmD9    73 wing disc ML-DmD16-c3    33 wing disc ML-DmD21    101 wing disc ML-DmD32    95 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    81 antennal disc ML-DmD20-c5    73 mixed discs ML-DmD4-c1    51 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    44 tumorous blood cells mbn2    35 ovary fGS/OSS    28 ovary OSC    20 ovary OSS    8 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    52 Schneider line 2 Sg4    69 embryonic 1182-4H    50 embryonic GM2    37 embryonic Kc167    31 embryonic S1    50 embryonic S3    40 leg disc CME L1    50 wing disc CME-W2    41 wing disc ML-DmD8    54 wing disc ML-DmD9    73 wing disc ML-DmD16-c3    33 wing disc ML-DmD21    101 wing disc ML-DmD32    95 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    81 antennal disc ML-DmD20-c5    73 mixed discs ML-DmD4-c1    51 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    44 tumorous blood cells mbn2    35 ovary fGS/OSS    28 ovary OSC    20 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (52) Schneider line 2 Sg4  (69) embryonic 1182-4H  (50) embryonic GM2  (37) embryonic Kc167  31 embryonic S1  (50) embryonic S3  (40) leg disc CME L1  (50) wing disc CME-W2  (41) wing disc ML-DmD8  (54) wing disc ML-DmD9  (73) wing disc ML-DmD16-c3  (33) wing disc ML-DmD21  (101) wing disc ML-DmD32  (95) haltere disc ML-DmD17-c3  (41) eye-antennal disc ML-DmD11  (81) antennal disc ML-DmD20-c5  (73) mixed discs ML-DmD4-c1  (51) CNS ML-DmBG1-c1  (40) CNS ML-DmBG2-c2  (44) tumorous blood cells mbn2  (35) ovary fGS/OSS  28 ovary OSC    20 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    52 Schneider line 2 Sg4    69 embryonic 1182-4H    50 embryonic GM2    37 embryonic Kc167    31 embryonic S1    50 embryonic S3    40 leg disc CME L1    50 wing disc CME-W2    41 wing disc ML-DmD8    54 wing disc ML-DmD9    73 wing disc ML-DmD16-c3    33 wing disc ML-DmD21  101 wing disc ML-DmD32    95 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    81 antennal disc ML-DmD20-c5    73 mixed discs ML-DmD4-c1    51 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    44 tumorous blood cells mbn2    35 ovary fGS/OSS    28 ovary OSC    20 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    52 Schneider line 2 Sg4    69 embryonic 1182-4H    50 embryonic GM2    37 embryonic Kc167    31 embryonic S1    50 embryonic S3    40 leg disc CME L1    50 wing disc CME-W2    41 wing disc ML-DmD8    54 wing disc ML-DmD9    73 wing disc ML-DmD16-c3    33 wing disc ML-DmD21    101 wing disc ML-DmD32    95 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    81 antennal disc ML-DmD20-c5    73 mixed discs ML-DmD4-c1    51 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    44 tumorous blood cells mbn2    35 ovary fGS/OSS    28 ovary OSC    20 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    14 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    39 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    18 Copper 0.5 mM 12 hrs, larvae L3    21 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    12 Ethanol 2.5% 3 hrs, larvae L3    36 Ethanol 5% 3 hrs, larvae L3    23 Ethanol 10% 3 hrs, larvae L3    28 Caffeine 1.5 mg/ml 4 hrs, larvae L3    29 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    24 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    46 Rotenone 2 μg 12 hrs, larvae L3    26 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    14 heat shock, 4-day adult  26 Cadmium 50 mM 6 hrs, larvae L3  (39) Cadmium 50 mM 12 hrs, larvae L3  (35) Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    18 Copper 0.5 mM 12 hrs, larvae L3    21 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    12 Ethanol 2.5% 3 hrs, larvae L3  (36) Ethanol 5% 3 hrs, larvae L3    23 Ethanol 10% 3 hrs, larvae L3  (28) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (29) Caffeine 2.5 mg/ml 48 hrs, 4-day adult    24 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult  (33) Paraquat 10 mM 48 hrs, 4-day adult  (46) Rotenone 2 μg 12 hrs, larvae L3  26 Rotenone 8 μg 12 hrs, larvae L3  (30) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    14 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    39 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    18 Copper 0.5 mM 12 hrs, larvae L3    21 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    12 Ethanol 2.5% 3 hrs, larvae L3    36 Ethanol 5% 3 hrs, larvae L3    23 Ethanol 10% 3 hrs, larvae L3    28 Caffeine 1.5 mg/ml 4 hrs, larvae L3    29 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    24 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    46 Rotenone 2 μg 12 hrs, larvae L3    26 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    14 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    39 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    18 Copper 0.5 mM 12 hrs, larvae L3    21 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    12 Ethanol 2.5% 3 hrs, larvae L3    36 Ethanol 5% 3 hrs, larvae L3    23 Ethanol 10% 3 hrs, larvae L3    28 Caffeine 1.5 mg/ml 4 hrs, larvae L3    29 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    24 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    46 Rotenone 2 μg 12 hrs, larvae L3    26 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    14 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    39 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    18 Copper 0.5 mM 12 hrs, larvae L3    21 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    12 Ethanol 2.5% 3 hrs, larvae L3    36 Ethanol 5% 3 hrs, larvae L3    23 Ethanol 10% 3 hrs, larvae L3    28 Caffeine 1.5 mg/ml 4 hrs, larvae L3    29 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    24 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    46 Rotenone 2 μg 12 hrs, larvae L3    26 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    14 heat shock, 4-day adult  26 Cadmium 50 mM 6 hrs, larvae L3  (39) Cadmium 50 mM 12 hrs, larvae L3  (35) Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    18 Copper 0.5 mM 12 hrs, larvae L3    21 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    12 Ethanol 2.5% 3 hrs, larvae L3  (36) Ethanol 5% 3 hrs, larvae L3    23 Ethanol 10% 3 hrs, larvae L3  28 Caffeine 1.5 mg/ml 4 hrs, larvae L3  29 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    24 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult  (33) Paraquat 10 mM 48 hrs, 4-day adult  (46) Rotenone 2 μg 12 hrs, larvae L3  26 Rotenone 8 μg 12 hrs, larvae L3  30 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    14 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    39 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    18 Copper 0.5 mM 12 hrs, larvae L3    21 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    12 Ethanol 2.5% 3 hrs, larvae L3    36 Ethanol 5% 3 hrs, larvae L3    23 Ethanol 10% 3 hrs, larvae L3    28 Caffeine 1.5 mg/ml 4 hrs, larvae L3    29 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    24 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    46 Rotenone 2 μg 12 hrs, larvae L3    26 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    14 cold shock, 4-day adult    14 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    39 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    18 Copper 0.5 mM 12 hrs, larvae L3    21 Copper 15 mM 48 hrs, 4-day adult    8 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    12 Ethanol 2.5% 3 hrs, larvae L3    36 Ethanol 5% 3 hrs, larvae L3    23 Ethanol 10% 3 hrs, larvae L3    28 Caffeine 1.5 mg/ml 4 hrs, larvae L3    29 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    24 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    46 Rotenone 2 μg 12 hrs, larvae L3    26 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_21 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	BDGP expression data • RE74472 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0086768
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable Pcmtf00979 viable, with Scer\GAL4pnr-MD237 PcmtGD8637 Sterility Allele fertile Pcmtf00979 fertile, with Scer\GAL4hs.PB PcmtScer\UAS.cCa Other Phenotypes Allele locomotor behavior defective, with Scer\GAL4Act5C.PHb PcmtScer\UAS.cCa locomotor behavior defective, with Scer\GAL4hs.PB PcmtScer\UAS.cCa long lived, with Scer\GAL4Act5C.PHb PcmtScer\UAS.cCa long lived, with Scer\GAL4hs.PB PcmtScer\UAS.cCa Phenotype manifest in Allele
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of Pcmt Class Mutagen Stocks Known lesion Pcmtf00979 piggyBac transposase 2 -- PcmtG4610 P-element activity 1 -- PcmtLT P-element activity 1 Yes
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Pcmt Class Mutagen Stocks Known lesion PcmtScer\UAS.cCa in vitro construct - regulatory fusion 3 Yes PcmtdsRNA.IR.Scer\UAS in vitro construct - regulatory fusion in vitro construct - RNAi 2 Yes PcmtGD8637 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes PcmtHMS00768 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Partially disrupted in	Df(3R)LT (O'Connor and Tanini, 2009.6.24)
Disrupted in	Df(3R)Exel6144 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD8637} NA P{TRiP.HMS00768} NA P{UAS-Pcmt.C} NA P{UAS-Pcmt.IR} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{3'EPgy2}LT NA PBac{WH}Pcmtf00979 NA insertion of mobile activating element P{EP}PcmtG4610 NA
Gene Ontology: Function, Process & Cellular Component ( 5 unique terms )
Terms Based on Experimental Evidence ( 2 terms )
Molecular Function
CV term Evidence References
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity inferred from direct assay (Bennett et al., 2003)
Biological Process
CV term Evidence References
defense response to bacterium inferred from mutant phenotype (Ayres et al., 2008)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term Evidence References
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity inferred from sequence or structural similarity with mouse Pcmt1 (FlyBase, 1992-) non-traceable author statement (O'Connor, 1995.12.21, O'Connor, 1995.10.2, Galus et al., 1995)
Biological Process
CV term Evidence References
cellular protein modification process inferred from electronic annotation with InterPro:IPR000682 (FlyBase Curators et al., 2004-) non-traceable author statement (Swiss-Prot Project Members, 1997.2.1) protein repair non-traceable author statement (O'Connor, 1995.10.2)
Cellular Component
CV term Evidence References
cytoplasm non-traceable author statement (Swiss-Prot Project Members, 1997.2.1)
Sequence Ontology: Class of Gene
	gene   nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
Pcmt - CG1129 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Pcmt - CG13321 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Pcmt - CG1532 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Pcmt - CG5746 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Pcmt - Fsn anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Pcmt - Inos anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Pcmt - RpL35A anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Pcmt - RpS12 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Pcmt - RpS21 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Pcmt - Ugt anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Pcmt allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0086768 DroID - A comprehensive database of gene and protein interactions. • FBgn0086768 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40668
Orthologs
OrthoDB Orthologs (49) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6S7K98 Dipteran inclusive ortholog search EOG6W9JCX Insect inclusive ortholog search EOG666TGB Arthropod inclusive ortholog search EOG69S4NR Metazoa inclusive ortholog search EOG6FNHB4
Orthologs in Drosophila Species (EOG6S7K98)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Pcmt     Drosophila simulans   Dsim\GD19608     Drosophila sechellia   Dsec\GM10623     Drosophila erecta   Dere\GG10966     Drosophila yakuba   Dyak\GE24165     Drosophila ananassae   Dana\GF16041     Drosophila pseudoobscura pseudoobscura   Dpse\GA15271     Drosophila persimilis   Dper\GL22157     Drosophila willistoni   Dwil\GK13781     Drosophila virilis   Dvir\GJ24552     Drosophila mojavensis   Dmoj\GI24486     Drosophila grimshawi   Dgri\GH22401
Orthologs in non-Drosophila Dipterans (EOG6W9JCX)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL015520   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL001465   Anopheles gambiae Malaria mosquito  Agam\AGAP000457   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ016406
Orthologs in non-Dipteran Insects (EOG666TGB)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB44080   Apis mellifera Western honey bee  Amel\GB44141   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG012564   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG025136   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG010222   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH20231   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH22964   Atta cephalotes Leafcutter ant  Acep\ACEP11069   Atta cephalotes Leafcutter ant  Acep\ACEP11461   Camponotus floridanus Florida carpenter ant  Cflo\CFLO13230   Camponotus floridanus Florida carpenter ant  Cflo\CFLO13229   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL22530   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL22531   Linepithema humile Argentine ant  Lhum\LH14641   Pogonomyrmex barbatus Red harvester ant  Pbar\PB23964   Solenopsis invicta Red fire ant  Sinv\SINV19049   Acyrthosiphon pisum Pea aphid  Apim\ACYPI004561   Bombyx mori Silkmoth  Bmor\BGIBMGA004956   Pediculus humanus Human body louse  Phum\PHUM349660   Tribolium castaneum Red flour beetle  Tcas\GLEAN_07209
Orthologs in non-Insect Arthropods (EOG69S4NR)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_47356   Ixodes scapularis Deer tick  Isca\ISCW019420
Orthologs in non-Arthropod Metazoa (EOG6FNHB4)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\pcm-1   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_014888gn   Danio rerio Zebrafish  Drer\pcmt   Danio rerio Zebrafish  Drer\pcmtl   Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000015985   Xenopus tropicalis Western clawed frog  Xtro\pcmt1   Gallus gallus Domestic chicken  Ggal\LOC423008   Gallus gallus Domestic chicken  Ggal\PCMT1   Mus musculus House mouse  Mmus\Pcmt1   Rattus norvegicus Norway rat  Rnor\Pcmt1   Homo sapiens Human  Hsap\ENSG00000120265
Human Orthologs (1)
Gene OMIM HGNC Hsap\ENSG00000120265
AAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
Stocks & Reagents
Stocks Listed in FlyBase ( 12 )
Bloomington	27396 P{UAS-Pcmt.IR}3-4 27397 P{UAS-Pcmt.IR}X-5 27393 w*; P{UAS-Pcmt.C}2-1 27394 P{UAS-Pcmt.C}X-2, w* 27395 w*; P{UAS-Pcmt.C}3-2 30088 w1118; P{EP}PcmtG4610 18398 w1118; PBac{WH}Pcmtf00979 32971 y1 sc* v1; P{TRiP.HMS00768}attP2 27595 y1 w*; Df(3R)LT, miaLT PcmtLT
Harvard	- PBac{WH}Pcmtf00979
VDRC	v19123 w1118; P{GD8637}v19123 v19121 w1118; P{GD8637}v19121/CyO
Genomic Clones ( 1 )
	BACR24O24 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 42 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH18536 RE73839 RE74472
Other clones	DPiM_RE74472
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH02868 GH05805 GH06539 GH08495 GH12647 GH14106 GH22349 GH23543 GH25163 GM16369 GM29761 RE49529 RE54335 RE56086 RE69517 RH13626 RH14905 SD15082
Other clones	40359 43676 106282 117468 163406 164870 273177 CK01.33A.D6 Dmel_dig_005103_0677_1842 EK153762 EK162642 EK231712 EK265309 EK267940 EK269518 IP03246 IP07604 RC0-DA0008-130700-012-E07 RC0-DA0008-130700-013-D02 RC0-DA0008-130700-013-G07
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0086768 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40668
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Pcmt CG2152 (Gong, 1999.11)
Source for database merge of	Source for merge of: Pcmt Pimt (Bennett et al., 2003)
Additional comments	FlyBase curator comment: As pointed out by Terence Murphy of NCBI, the amino acid sequence given in Figure 1 for Pimt is identical to that of Pcmt. Therefore, this publication is the source of the merge for the two genes. (Bennett et al., 2003)
Other Comments
	Nonsense-mediated mRNA decay (NMD) down-regulates a distinct splice isoform(s) of this gene. (Hansen et al., 2009) Pcmt has been cloned and sequenced. (O'Connor et al., 1997)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_080508 NM_001275358 RefSeq (Proteins) • NP_536756 NP_001262287 DDBJ / EMBL / GenBank • AAA80540 AAA86272 AAF52012 AAF52012.1 AAL48101 AAL68334 AAN13241.1 AGB95670 AY070630 AY075527 BI579760 BI580301 U37432 U43737 Entrez Gene - A searchable database of RefSeq genes. • 40668 UniProtKB/Swiss-Prot • Q27869
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Protein-L-isoaspartate(D-aspartate) O-methyltransferase (IPR000682) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • RE74472
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0086768 DroID - A comprehensive database of gene and protein interactions. • FBgn0086768 DRSC - Results from RNAi screens. • FBgn0086768 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0086768 FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0086768 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40668 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40668 modMine - Data generated by the modENCODE project. • FBgn0086768
Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym	CG2152 (Ayres et al., 2008, Hansen et al., 2009, Ni et al., 2010.12.1) dPIMT (Bennett et al., 2003) pcmt (Ayres et al., 2008) Pcmt (O'Connor, 2009.5.11, O'Connor and Tanini, 2009.6.24, Hansen et al., 2009) PIMT (David et al., 1999, Galus et al., 1995) Pimt
Name Synonym	protein D-aspartyl, L-isoaspartyl O-methyltransferase (O'Connor, 1995.10.2) Protein isoaspartyl methyltransferase (Galus et al., 1995) Protein-L-isoaspartate (D-aspartate) O-methyltransferase
Secondary FlyBase IDs
	FBgn0015276 FBgn0015280 FBgn0022769
References ( 35 )
Generate a list of	All references relating to this gene ( 35 )
List References by type	Research paper  ( 7 ) Supplementary material  ( 3 ) Personal communication to FlyBase  ( 11 ) Abstract  ( 5 ) FlyBase analysis  ( 1 ) DNA/RNA sequence record  ( 2 ) Curated genome annotation  ( 3 ) Protein sequence record  ( 1 ) Website  ( 1 )
Recent research papers (0)
	All research papers listed in FlyBase were published before 2011 Show research papers ...