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Gene Dmel\gish

General Information
Symbol	Dmel\gish	Species	D. melanogaster
Name	gilgamesh	Annotation symbol	CG6963
Feature type	protein_coding_gene	FlyBase ID	FBgn0250823
Gene Model Status	Current	Stock availability	36 publicly available
Also Known As	ms(3)89B, CKIγ, Hrr25, CK1γ
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	89B9-89B12	Sequence location	3R:12,098,174..12,130,490 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene gilgamesh is referred to in FlyBase by the symbol Dmel\gish (CG6963, FBgn0250823). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: protein serine/threonine kinase activity. There is experimental evidence for 11 unique biological process terms, many of which group under: biological regulation; regulation of developmental process; multicellular organism reproduction; cellular process; gamete generation; single-organism developmental process; regulation of cellular component organization; spermatid differentiation; macromolecule modification; spermatogenesis; localization; associative learning; ommatidial rotation; response to stimulus. 62 alleles are reported. The phenotypes of these alleles are annotated with: spermatogonium; onion stage spermatid; investment cone; eye; trichogen cell; photoreceptor cell; ommatidium; mature eight-cell ommatidial precursor cluster; minor mitochondrial derivative. It has 13 annotated transcripts and 13 annotated polypeptides. Protein features are: Casein kinase 1 gamma C-terminal; Protein kinase, ATP binding site; Protein kinase, catalytic domain; Protein kinase-like domain; Serine/threonine-protein kinase, active site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: adult eye. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval salivary gland, larval trachea, adult ovary. Comments on Affy2 ProbeSet: ProbeSet 1626805_s_at completely aligns to an exonic region of only a subset of 8 of the 9 FlyBase-annotated transcript isoforms of gish. Gene sequence location is 3R:12098174..12130490.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03	Alleles gish[Br]
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 89B9-89B12   Limits computationally determined from genome sequence between P{PZ}blp01618 and P{PZ}gish04895&P{EP}EP3171
Experimentally Determined Cytological Location
Cytogenetic map Notes References 89B1-89B22   (determined by in situ hybridisation)   (Spradling et al., 1999) 89B1-89B22     (BDGP Project Members, 1994-1999)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\gish for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	gene_with_stop_codon_read_through ; SO:0000697 Gene model reviewed during 5.44 Stop-codon suppression (UGA) postulated; FBrf0216884. Gene model reviewed during 5.47 Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters. Annotated transcripts do not represent all supported alternative splices within 5' UTR. Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) gish-RA FBtr0083263  NM_169711   2677   422 gish-RB FBtr0083262  NM_169712   3227   468 gish-RC FBtr0083264  NM_080202   2330   427 gish-RD FBtr0083261  NM_169713   2945   468 gish-RE FBtr0083265  NM_176506   3212   463 gish-RF FBtr0100331  NM_001014628   2171   358 gish-RG FBtr0100332  NM_001014627   1959   476 gish-RH FBtr0100333  NM_001014626   3149   468 gish-RI FBtr0301304  NM_001170157   3245   474 gish-RJ FBtr0305071  NM_001260208   3386   521 gish-RK FBtr0305072  NM_001260209   3311   496 gish-RL FBtr0330041  NM_001275695   2945   537 gish-RM FBtr0334606  NM_001275696   5623   468
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein gish-PA   FBpp0082717   48.2   422   9.27     NP_732123   AAF55293 gish-PB   FBpp0082716   52.6   468   9.78     NP_732124   AAF55294 gish-PC   FBpp0082718   48.7   427   9.57     NP_524941   AAN13703 gish-PD   FBpp0082715   52.6   468   9.78     NP_732125   AAN13704 gish-PE   FBpp0082719   52.1   463   9.55     NP_788683   AAO41569 gish-PF   FBpp0099736   40.9   358   9.68     NP_001014628   AAX52957 gish-PG   FBpp0099737   53.6   476   9.72     NP_001014627   AAX52958 gish-PH   FBpp0099738   52.6   468   9.78     NP_001014626   AAX52956 gish-PI   FBpp0290519   53.3   474   9.76     NP_001163628   ACZ94924 gish-PJ   FBpp0293608   58.4   521   8.94     NP_001247137   AFH06455 gish-PK   FBpp0293609   55.5   496   9.83     NP_001247138   AFH06456 gish-PL   FBpp0303074   60.1   537   9.61     NP_001262624   AGB96004 gish-PM   FBpp0306673   52.6   468   9.78     NP_001262625   AGB96005
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Protein kinase, catalytic domain (IPR000719) Serine/threonine-protein kinase, active site (IPR008271) Protein kinase-like domain (IPR011009) Protein kinase, ATP binding site (IPR017441) Casein kinase 1 gamma C-terminal (IPR022247)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA201386   AA264321   AA264396   AA390548   AA391262   AA540797   AA695782   AA696055   AA801759   AA816247   AA821244   AA949351   AA949934   AA950661   AA950799   AA950985   AE014297 AAF55293   AE014297 AAF55294   AE014297 AAN13703   AE014297 AAN13704   AE014297 AAO41569   AE014297 AAX52956   AE014297 AAX52957   AE014297 AAX52958   AE014297 ACZ94924   AE014297 AFH06455   AE014297 AFH06456   AE014297 AGB96004   AE014297 AGB96005   AI257116   AI454972   AI456596   AI456919   AI518906   AI518930   AI519776   AI532965   AI542884   AI546152   AI946186   AI946515   AQ073361   AW942879   AW944594   AX094301   AZ300980   BE976204   BE976577   BE977640   BE977685   BE977782   BE977869   BE978846   BF502789   BG634147   BG638622   BG638626   BH614994   BI165812   BI168767   BI171179   BI212368   BI213648   BI238765   BI240036   BI372939   BI375308   BI481833   BI578095   BI639605   BP547002   BP559007   BQ102990   BT001330 AAN71085   BT004871 AAO45227   BT011043   BT011384   BT125862   CA803714   CA806461   CL610185   CO177193   CO177199   CO178553   CO179048   CO179196   CO179384   CO179507   CO179712   CO183866   CO186965   CO187529   CO187531   CO188187   CO189283   CO191865   CO194174   CO196102   CO261895   CO263620   CO263877   CO264632   CO266694   CO268172   CO269064   CO269333   CO271098   CO272510   CO273642   CO277441   CO278410   CO282267   CO283379   CO283512   CO283881   CO284885   CO285102   CO285625   CO286238   CO286337   CO286901   CO286914   CO288899   CO288916   CO289712   CO290065   CO290703   CO291181   CO293257   CO294172   CO294393   CO295076   CO295214   CO296657   CO298267   CO298952   CO300582   CO301150   CO302607   CO304494   CO304656   CO305629   CO305751   CO306865   CO310418   CO312200   CO312444   CO313556   CO315443   CO318407   CO321497   CO324556   CO325691   CO326590   CO330136   CO331425   CO338067   CO338547   CO338917   CO340234   CO340864   CO341224   CO343468   CO344705   CO345174   CZ466637   CZ467209   CZ467210   CZ467509   CZ467799   CZ467800   CZ470351   CZ471134   CZ471180   CZ473091   CZ473092   CZ473719   CZ474118   CZ475598   CZ475612   CZ476803   CZ479574   CZ481077   CZ483625   CZ484328   CZ485373   CZ485374   CZ485628   DN154377   EC053464   EC054442   EC054947   EC056568   EC056705   EC056789   EC057661   EC064153   EC066281   EC069088   EC069578   EC071157   EC072316   EC073816   EC076060   EC077380   EC079373   EC080988   EC081387   EC081394   EC081666   EC081839   EC083199   EC084522   EC087019   EC088009   EC088549   EC088607   EC196003   EC196361   EC196691   EC197646   EC200856   EC201225   EC202720   EC203130   EC203205   EC203369   EC204597   EC205792   EC205976   EC206373   EC206374   EC209233   EC209807   EC210036   EC211558   EC216464   EC218599   EC218675   EC218824   EC219835   EC219992   EC223298   EC223950   EC224272   EC224429   EC224492   EC228736   EC229499   EC230456   EC231484   EC231910   EC236116   EC236762   EC237622   EC238320   EC240194   EC242309   EC242816   EC243860   EC247517   EC248631   EC249301   EC251847   EC253548   EC253925   EC254672   EC255210   EC263486   EC265338   EL876970   EL876971   EL877053   EL877054   EL877156   EL877157   EL877261   EL877262   EV575516   EV589421   EV593988   EV598226   GH880400   GH942970   GH943161   GH943286   GH945044   GH946370   GH946426   GH946796   GH946800   GH946905   GH947130   GH947288   GH948513   GH950697   GH950929   GH951530   GH951705   GH951845   GH951893   GH951961   GH952233   GH952432   GH953357   GH953448   GH953828   GH953920   GH955460   GH956582   GH956760   GH958244   GH959555   GH960269   GH961475   GH962258   GH962978   GH963148   GH964055   GH964729   GH964915   GH965232   GH966176   GH966798   GH968102   GH970304   GH970450   GH971168   GH972417   GH974896   GH975300   GH975548   GH975566   GH975670   GH975843   GH976061   GH976136   GH976483   GH977272   GH978491   GH979756   GH981825   GH982259   GH982573   GH982810   GH983048   GH984053   GH985080
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q59DW8 Q86BR9 Q86NK8 Q8IHB0 Q8INB6 Q9VEX2 Q4AB31
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference adult stage   Kenyon cell | restricted   (Tan et al., 2010)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
immunolocalization Stage Tissue/Position (including subcellular localization) Reference adult stage   adult head | restricted   (Tan et al., 2010) adult mushroom body | restricted   (Tan et al., 2010) calyx of adult mushroom body | restricted   • dendrite (Tan et al., 2010) adult pedunculus | restricted   • axon (Tan et al., 2010) mushroom body beta-lobe | restricted   • axon (Tan et al., 2010) mushroom body alpha-lobe | restricted   • axon (Tan et al., 2010) adult central complex | restricted   (Tan et al., 2010) ellipsoid body | restricted   (Tan et al., 2010) fan-shaped body | restricted   (Tan et al., 2010) nodulus | restricted   (Tan et al., 2010) protocerebral bridge | restricted   (Tan et al., 2010) adult mushroom body beta'-lobe | restricted   • axon (Tan et al., 2010) adult mushroom body alpha'-lobe | restricted   • axon (Tan et al., 2010) adult mushroom body gamma-lobe | restricted   • axon (Tan et al., 2010)
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
nucleus inferred from direct assay (Nerusheva et al., 2009) plasma membrane inferred from direct assay (Frescas et al., 2006, Zhang et al., 2006, Khanna et al., 2010, Nerusheva et al., 2009) colocalizes_with plasma membrane inferred from direct assay (Gault et al., 2012) sperm individualization complex inferred from mutant phenotype (Nerusheva et al., 2009)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: adult eye. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval salivary gland, larval trachea, adult ovary. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    253.625 Larval Midgut    159.7 Larval Hindgut    169.2 Larval Malpighian Tubules    190.5 Larval Fat Body    94 Larval Salivary Gland    103.7 Larval Trachea    211.15 Larval Carcass    94.45 Adult Head    148.6 Adult Eye    575.075 Adult Brain    309.4 Adult Thoracic-Abdominal Ganglion    256.1 Adult Crop    138.5 Adult Midgut    190.8 Adult Hindgut    132.3 Adult Malpighian Tubules    143.4 Adult Fat Body    88.7 Adult Salivary Gland    94.7 Adult Heart    139.375 Adult VirginFemale Spermatheca    60.8 Adult InseminatedFemale Spermatheca    61.5 Adult Ovary    413.1 Adult Testis    64.6 Adult Male Accessory Gland    67.6 Adult Carcass    72.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    253.625 Larval Midgut    159.7 Larval Hindgut    169.2 Larval Malpighian Tubules    190.5 Larval Fat Body    94 Larval Salivary Gland    103.7 Larval Trachea    211.15 Larval Carcass    94.45 Adult Head    148.6 Adult Eye  (575.075) Adult Brain    309.4 Adult Thoracic-Abdominal Ganglion    256.1 Adult Crop    138.5 Adult Midgut    190.8 Adult Hindgut    132.3 Adult Malpighian Tubules    143.4 Adult Fat Body    88.7 Adult Salivary Gland    94.7 Adult Heart    139.375 Adult VirginFemale Spermatheca    60.8 Adult InseminatedFemale Spermatheca    61.5 Adult Ovary    413.1 Adult Testis    64.6 Adult Male Accessory Gland    67.6 Adult Carcass    72.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    253.625 Larval Midgut    159.7 Larval Hindgut    169.2 Larval Malpighian Tubules    190.5 Larval Fat Body    94 Larval Salivary Gland    103.7 Larval Trachea    211.15 Larval Carcass    94.45 Adult Head    148.6 Adult Eye    575.075 Adult Brain    309.4 Adult Thoracic-Abdominal Ganglion    256.1 Adult Crop    138.5 Adult Midgut    190.8 Adult Hindgut    132.3 Adult Malpighian Tubules    143.4 Adult Fat Body    88.7 Adult Salivary Gland    94.7 Adult Heart    139.375 Adult VirginFemale Spermatheca    60.8 Adult InseminatedFemale Spermatheca    61.5 Adult Ovary    413.1 Adult Testis    64.6 Adult Male Accessory Gland    67.6 Adult Carcass    72.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    253.625 Larval Midgut    159.7 Larval Hindgut    169.2 Larval Malpighian Tubules    190.5 Larval Fat Body    94 Larval Salivary Gland    103.7 Larval Trachea    211.15 Larval Carcass    94.45 Adult Head    148.6 Adult Eye    575.075 Adult Brain    309.4 Adult Thoracic-Abdominal Ganglion    256.1 Adult Crop    138.5 Adult Midgut    190.8 Adult Hindgut    132.3 Adult Malpighian Tubules    143.4 Adult Fat Body    88.7 Adult Salivary Gland    94.7 Adult Heart    139.375 Adult VirginFemale Spermatheca    60.8 Adult InseminatedFemale Spermatheca    61.5 Adult Ovary    413.1 Adult Testis    64.6 Adult Male Accessory Gland    67.6 Adult Carcass    72.9 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    253.625 Larval Midgut    159.7 Larval Hindgut    169.2 Larval Malpighian Tubules    190.5 Larval Fat Body    94 Larval Salivary Gland    103.7 Larval Trachea    211.15 Larval Carcass    94.45 Adult Head    148.6 Adult Eye    575.075 Adult Brain    309.4 Adult Thoracic-Abdominal Ganglion    256.1 Adult Crop    138.5 Adult Midgut    190.8 Adult Hindgut    132.3 Adult Malpighian Tubules    143.4 Adult Fat Body    88.7 Adult Salivary Gland    94.7 Adult Heart    139.375 Adult VirginFemale Spermatheca    60.8 Adult InseminatedFemale Spermatheca    61.5 Adult Ovary    413.1 Adult Testis    64.6 Adult Male Accessory Gland    67.6 Adult Carcass    72.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    253.625 Larval Midgut    159.7 Larval Hindgut    169.2 Larval Malpighian Tubules    190.5 Larval Fat Body    94 Larval Salivary Gland    103.7 Larval Trachea    211.15 Larval Carcass    94.45 Adult Head    148.6 Adult Eye  575.075 Adult Brain    309.4 Adult Thoracic-Abdominal Ganglion    256.1 Adult Crop    138.5 Adult Midgut    190.8 Adult Hindgut    132.3 Adult Malpighian Tubules    143.4 Adult Fat Body    88.7 Adult Salivary Gland    94.7 Adult Heart    139.375 Adult VirginFemale Spermatheca    60.8 Adult InseminatedFemale Spermatheca    61.5 Adult Ovary    413.1 Adult Testis    64.6 Adult Male Accessory Gland    67.6 Adult Carcass    72.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    253.625 Larval Midgut    159.7 Larval Hindgut    169.2 Larval Malpighian Tubules    190.5 Larval Fat Body    94 Larval Salivary Gland    103.7 Larval Trachea    211.15 Larval Carcass    94.45 Adult Head    148.6 Adult Eye    575.075 Adult Brain    309.4 Adult Thoracic-Abdominal Ganglion    256.1 Adult Crop    138.5 Adult Midgut    190.8 Adult Hindgut    132.3 Adult Malpighian Tubules    143.4 Adult Fat Body    88.7 Adult Salivary Gland    94.7 Adult Heart    139.375 Adult VirginFemale Spermatheca    60.8 Adult InseminatedFemale Spermatheca    61.5 Adult Ovary    413.1 Adult Testis    64.6 Adult Male Accessory Gland    67.6 Adult Carcass    72.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    253.625 Larval Midgut    159.7 Larval Hindgut    169.2 Larval Malpighian Tubules    190.5 Larval Fat Body    94 Larval Salivary Gland    103.7 Larval Trachea    211.15 Larval Carcass    94.45 Adult Head    148.6 Adult Eye    575.075 Adult Brain    309.4 Adult Thoracic-Abdominal Ganglion    256.1 Adult Crop    138.5 Adult Midgut    190.8 Adult Hindgut    132.3 Adult Malpighian Tubules    143.4 Adult Fat Body    88.7 Adult Salivary Gland    94.7 Adult Heart    139.375 Adult VirginFemale Spermatheca    60.8 Adult InseminatedFemale Spermatheca    61.5 Adult Ovary    413.1 Adult Testis    64.6 Adult Male Accessory Gland    67.6 Adult Carcass    72.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    148.6   NA  Eye    575.075   NA  Brain    309.4   253.625  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    256.1   NA  Crop    138.5   159.7  Midgut    190.8   169.2  Hindgut    132.3   190.5  Malpighian Tubules    143.4   94  Fat Body    88.7   103.7  Salivary Gland    94.7   NA  Heart    139.375   211.15  Trachea    NA   NA  VirginFemale Spermatheca    60.8   NA  InseminatedFemale Spermatheca    61.5   NA  Ovary    413.1   NA  Testis    64.6   NA  Male Accessory Gland    67.6   94.45  Carcass    72.9 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    39 central nervous system, pupae P8    48 head, virgin 1-day female    26 head, virgin 4-day female    25 head, virgin 20-day female    13 head, mated 1-day female    28 head, mated 4-day female    21 head, mated 20-day female    15 head, mated 1-day male    34 head, mated 4-day male    37 head, mated 20-day male    26 salivary gland, larvae L3 wandering    28 salivary gland, white prepupae    157 digestive system, larvae L3 wandering    15 digestive system, 1-day adult    12 digestive system, 4-day adult    22 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    25 fat body, pupae P8    36 carcass, larvae L3 wandering    22 carcass, 1-day adult    11 carcass, 4-day adult    15 carcass, 20-day adult    12 ovary, virgin 4-day female    58 ovary, mated 4-day female    63 testis, mated 4-day male    57 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (58) central nervous system, larvae L3  (39) central nervous system, pupae P8  (48) head, virgin 1-day female  26 head, virgin 4-day female    25 head, virgin 20-day female    13 head, mated 1-day female  (28) head, mated 4-day female    21 head, mated 20-day female    15 head, mated 1-day male  (34) head, mated 4-day male  (37) head, mated 20-day male  26 salivary gland, larvae L3 wandering  (28) salivary gland, white prepupae  (157) digestive system, larvae L3 wandering    15 digestive system, 1-day adult    12 digestive system, 4-day adult    22 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    25 fat body, pupae P8  (36) carcass, larvae L3 wandering    22 carcass, 1-day adult    11 carcass, 4-day adult    15 carcass, 20-day adult    12 ovary, virgin 4-day female  (58) ovary, mated 4-day female  (63) testis, mated 4-day male  (57) accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    39 central nervous system, pupae P8    48 head, virgin 1-day female    26 head, virgin 4-day female    25 head, virgin 20-day female    13 head, mated 1-day female    28 head, mated 4-day female    21 head, mated 20-day female    15 head, mated 1-day male    34 head, mated 4-day male    37 head, mated 20-day male    26 salivary gland, larvae L3 wandering    28 salivary gland, white prepupae  (157) digestive system, larvae L3 wandering    15 digestive system, 1-day adult    12 digestive system, 4-day adult    22 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    25 fat body, pupae P8    36 carcass, larvae L3 wandering    22 carcass, 1-day adult    11 carcass, 4-day adult    15 carcass, 20-day adult    12 ovary, virgin 4-day female    58 ovary, mated 4-day female    63 testis, mated 4-day male    57 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    39 central nervous system, pupae P8    48 head, virgin 1-day female    26 head, virgin 4-day female    25 head, virgin 20-day female    13 head, mated 1-day female    28 head, mated 4-day female    21 head, mated 20-day female    15 head, mated 1-day male    34 head, mated 4-day male    37 head, mated 20-day male    26 salivary gland, larvae L3 wandering    28 salivary gland, white prepupae    157 digestive system, larvae L3 wandering    15 digestive system, 1-day adult    12 digestive system, 4-day adult    22 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    25 fat body, pupae P8    36 carcass, larvae L3 wandering    22 carcass, 1-day adult    11 carcass, 4-day adult    15 carcass, 20-day adult    12 ovary, virgin 4-day female    58 ovary, mated 4-day female    63 testis, mated 4-day male    57 accessory gland, mated 4-day male    12 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    39 central nervous system, pupae P8    48 head, virgin 1-day female    26 head, virgin 4-day female    25 head, virgin 20-day female    13 head, mated 1-day female    28 head, mated 4-day female    21 head, mated 20-day female    15 head, mated 1-day male    34 head, mated 4-day male    37 head, mated 20-day male    26 salivary gland, larvae L3 wandering    28 salivary gland, white prepupae    157 digestive system, larvae L3 wandering    15 digestive system, 1-day adult    12 digestive system, 4-day adult    22 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    25 fat body, pupae P8    36 carcass, larvae L3 wandering    22 carcass, 1-day adult    11 carcass, 4-day adult    15 carcass, 20-day adult    12 ovary, virgin 4-day female    58 ovary, mated 4-day female    63 testis, mated 4-day male    57 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (58) central nervous system, larvae L3  (39) central nervous system, pupae P8  (48) head, virgin 1-day female  26 head, virgin 4-day female    25 head, virgin 20-day female    13 head, mated 1-day female  28 head, mated 4-day female    21 head, mated 20-day female    15 head, mated 1-day male  (34) head, mated 4-day male  (37) head, mated 20-day male  26 salivary gland, larvae L3 wandering  28 salivary gland, white prepupae  (157) digestive system, larvae L3 wandering    15 digestive system, 1-day adult    12 digestive system, 4-day adult    22 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    25 fat body, pupae P8  (36) carcass, larvae L3 wandering    22 carcass, 1-day adult    11 carcass, 4-day adult    15 carcass, 20-day adult    12 ovary, virgin 4-day female  (58) ovary, mated 4-day female  (63) testis, mated 4-day male  (57) accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    39 central nervous system, pupae P8    48 head, virgin 1-day female    26 head, virgin 4-day female    25 head, virgin 20-day female    13 head, mated 1-day female    28 head, mated 4-day female    21 head, mated 20-day female    15 head, mated 1-day male    34 head, mated 4-day male    37 head, mated 20-day male    26 salivary gland, larvae L3 wandering    28 salivary gland, white prepupae  (157) digestive system, larvae L3 wandering    15 digestive system, 1-day adult    12 digestive system, 4-day adult    22 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    25 fat body, pupae P8    36 carcass, larvae L3 wandering    22 carcass, 1-day adult    11 carcass, 4-day adult    15 carcass, 20-day adult    12 ovary, virgin 4-day female    58 ovary, mated 4-day female    63 testis, mated 4-day male    57 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    58 central nervous system, larvae L3    39 central nervous system, pupae P8    48 head, virgin 1-day female    26 head, virgin 4-day female    25 head, virgin 20-day female    13 head, mated 1-day female    28 head, mated 4-day female    21 head, mated 20-day female    15 head, mated 1-day male    34 head, mated 4-day male    37 head, mated 20-day male    26 salivary gland, larvae L3 wandering    28 salivary gland, white prepupae    157 digestive system, larvae L3 wandering    15 digestive system, 1-day adult    12 digestive system, 4-day adult    22 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    25 fat body, pupae P8    36 carcass, larvae L3 wandering    22 carcass, 1-day adult    11 carcass, 4-day adult    15 carcass, 20-day adult    12 ovary, virgin 4-day female    58 ovary, mated 4-day female    63 testis, mated 4-day male    57 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    34 embryo 02-04hr    39 embryo 04-06hr    34 embryo 06-08hr    32 embryo 08-10hr    38 embryo 10-12hr    22 embryo 12-14hr    31 embryo 14-16hr    17 embryo 16-18hr    20 embryo 18-20hr    12 embryo 20-22hr    26 embryo 22-24hr    27 larva L1    9 larva L2    10 larva L3 12hr old    7 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    24 white prepupae new    28 white prepupae 12hr    33 white prepupae 24hr    35 pupae 2d postWPP    32 pupae 3d postWPP    25 pupae 4d postWPP    25 adult male 01day    30 adult male 05day    33 adult male 30day    26 adult female 01day    14 adult female 05day    28 adult female 30day    24 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (34) embryo 02-04hr  (39) embryo 04-06hr  (34) embryo 06-08hr  (32) embryo 08-10hr  (38) embryo 10-12hr    22 embryo 12-14hr  (31) embryo 14-16hr    17 embryo 16-18hr    20 embryo 18-20hr    12 embryo 20-22hr  26 embryo 22-24hr  (27) larva L1    9 larva L2    10 larva L3 12hr old    7 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    24 white prepupae new  (28) white prepupae 12hr  (33) white prepupae 24hr  (35) pupae 2d postWPP  (32) pupae 3d postWPP    25 pupae 4d postWPP    25 adult male 01day  (30) adult male 05day  (33) adult male 30day  26 adult female 01day    14 adult female 05day  (28) adult female 30day    24 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    34 embryo 02-04hr    39 embryo 04-06hr    34 embryo 06-08hr    32 embryo 08-10hr    38 embryo 10-12hr    22 embryo 12-14hr    31 embryo 14-16hr    17 embryo 16-18hr    20 embryo 18-20hr    12 embryo 20-22hr    26 embryo 22-24hr    27 larva L1    9 larva L2    10 larva L3 12hr old    7 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    24 white prepupae new    28 white prepupae 12hr    33 white prepupae 24hr    35 pupae 2d postWPP    32 pupae 3d postWPP    25 pupae 4d postWPP    25 adult male 01day    30 adult male 05day    33 adult male 30day    26 adult female 01day    14 adult female 05day    28 adult female 30day    24 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    34 embryo 02-04hr    39 embryo 04-06hr    34 embryo 06-08hr    32 embryo 08-10hr    38 embryo 10-12hr    22 embryo 12-14hr    31 embryo 14-16hr    17 embryo 16-18hr    20 embryo 18-20hr    12 embryo 20-22hr    26 embryo 22-24hr    27 larva L1    9 larva L2    10 larva L3 12hr old    7 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    24 white prepupae new    28 white prepupae 12hr    33 white prepupae 24hr    35 pupae 2d postWPP    32 pupae 3d postWPP    25 pupae 4d postWPP    25 adult male 01day    30 adult male 05day    33 adult male 30day    26 adult female 01day    14 adult female 05day    28 adult female 30day    24 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    34 embryo 02-04hr    39 embryo 04-06hr    34 embryo 06-08hr    32 embryo 08-10hr    38 embryo 10-12hr    22 embryo 12-14hr    31 embryo 14-16hr    17 embryo 16-18hr    20 embryo 18-20hr    12 embryo 20-22hr    26 embryo 22-24hr    27 larva L1    9 larva L2    10 larva L3 12hr old    7 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    24 white prepupae new    28 white prepupae 12hr    33 white prepupae 24hr    35 pupae 2d postWPP    32 pupae 3d postWPP    25 pupae 4d postWPP    25 adult male 01day    30 adult male 05day    33 adult male 30day    26 adult female 01day    14 adult female 05day    28 adult female 30day    24 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (34) embryo 02-04hr  (39) embryo 04-06hr  (34) embryo 06-08hr  32 embryo 08-10hr  (38) embryo 10-12hr    22 embryo 12-14hr  31 embryo 14-16hr    17 embryo 16-18hr    20 embryo 18-20hr    12 embryo 20-22hr  26 embryo 22-24hr  27 larva L1    9 larva L2    10 larva L3 12hr old    7 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    24 white prepupae new  28 white prepupae 12hr  (33) white prepupae 24hr  (35) pupae 2d postWPP  32 pupae 3d postWPP    25 pupae 4d postWPP    25 adult male 01day  30 adult male 05day  (33) adult male 30day  26 adult female 01day    14 adult female 05day  28 adult female 30day    24 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    34 embryo 02-04hr    39 embryo 04-06hr    34 embryo 06-08hr    32 embryo 08-10hr    38 embryo 10-12hr    22 embryo 12-14hr    31 embryo 14-16hr    17 embryo 16-18hr    20 embryo 18-20hr    12 embryo 20-22hr    26 embryo 22-24hr    27 larva L1    9 larva L2    10 larva L3 12hr old    7 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    24 white prepupae new    28 white prepupae 12hr    33 white prepupae 24hr    35 pupae 2d postWPP    32 pupae 3d postWPP    25 pupae 4d postWPP    25 adult male 01day    30 adult male 05day    33 adult male 30day    26 adult female 01day    14 adult female 05day    28 adult female 30day    24 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    34 embryo 02-04hr    39 embryo 04-06hr    34 embryo 06-08hr    32 embryo 08-10hr    38 embryo 10-12hr    22 embryo 12-14hr    31 embryo 14-16hr    17 embryo 16-18hr    20 embryo 18-20hr    12 embryo 20-22hr    26 embryo 22-24hr    27 larva L1    9 larva L2    10 larva L3 12hr old    7 larva L3 puffstage 1-2    7 larva L3 puffstage 3-6    14 larva L3 puffstage 7-9    24 white prepupae new    28 white prepupae 12hr    33 white prepupae 24hr    35 pupae 2d postWPP    32 pupae 3d postWPP    25 pupae 4d postWPP    25 adult male 01day    30 adult male 05day    33 adult male 30day    26 adult female 01day    14 adult female 05day    28 adult female 30day    24 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    38 Schneider line 2 Sg4    15 embryonic 1182-4H    17 embryonic GM2    33 embryonic Kc167    28 embryonic S1    24 embryonic S3    31 leg disc CME L1    19 wing disc CME-W2    27 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    26 wing disc ML-DmD21    7 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    15 mixed discs ML-DmD4-c1    21 CNS ML-DmBG1-c1    23 CNS ML-DmBG2-c2    17 tumorous blood cells mbn2    42 ovary fGS/OSS    23 ovary OSC    36 ovary OSS    26 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (38) Schneider line 2 Sg4    15 embryonic 1182-4H    17 embryonic GM2  (33) embryonic Kc167  (28) embryonic S1    24 embryonic S3  (31) leg disc CME L1    19 wing disc CME-W2  (27) wing disc ML-DmD8  (30) wing disc ML-DmD9    17 wing disc ML-DmD16-c3  26 wing disc ML-DmD21    7 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3  (34) eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    15 mixed discs ML-DmD4-c1    21 CNS ML-DmBG1-c1    23 CNS ML-DmBG2-c2    17 tumorous blood cells mbn2  (42) ovary fGS/OSS    23 ovary OSC  (36) ovary OSS  26 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    38 Schneider line 2 Sg4    15 embryonic 1182-4H    17 embryonic GM2    33 embryonic Kc167    28 embryonic S1    24 embryonic S3    31 leg disc CME L1    19 wing disc CME-W2    27 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    26 wing disc ML-DmD21    7 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    15 mixed discs ML-DmD4-c1    21 CNS ML-DmBG1-c1    23 CNS ML-DmBG2-c2    17 tumorous blood cells mbn2    42 ovary fGS/OSS    23 ovary OSC    36 ovary OSS    26 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    38 Schneider line 2 Sg4    15 embryonic 1182-4H    17 embryonic GM2    33 embryonic Kc167    28 embryonic S1    24 embryonic S3    31 leg disc CME L1    19 wing disc CME-W2    27 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    26 wing disc ML-DmD21    7 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    15 mixed discs ML-DmD4-c1    21 CNS ML-DmBG1-c1    23 CNS ML-DmBG2-c2    17 tumorous blood cells mbn2    42 ovary fGS/OSS    23 ovary OSC    36 ovary OSS    26 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    38 Schneider line 2 Sg4    15 embryonic 1182-4H    17 embryonic GM2    33 embryonic Kc167    28 embryonic S1    24 embryonic S3    31 leg disc CME L1    19 wing disc CME-W2    27 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    26 wing disc ML-DmD21    7 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    15 mixed discs ML-DmD4-c1    21 CNS ML-DmBG1-c1    23 CNS ML-DmBG2-c2    17 tumorous blood cells mbn2    42 ovary fGS/OSS    23 ovary OSC    36 ovary OSS    26 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (38) Schneider line 2 Sg4    15 embryonic 1182-4H    17 embryonic GM2  (33) embryonic Kc167  28 embryonic S1    24 embryonic S3  31 leg disc CME L1    19 wing disc CME-W2  27 wing disc ML-DmD8  30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3  26 wing disc ML-DmD21    7 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3  (34) eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    15 mixed discs ML-DmD4-c1    21 CNS ML-DmBG1-c1    23 CNS ML-DmBG2-c2    17 tumorous blood cells mbn2  (42) ovary fGS/OSS    23 ovary OSC  (36) ovary OSS  26 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    38 Schneider line 2 Sg4    15 embryonic 1182-4H    17 embryonic GM2    33 embryonic Kc167    28 embryonic S1    24 embryonic S3    31 leg disc CME L1    19 wing disc CME-W2    27 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    26 wing disc ML-DmD21    7 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    15 mixed discs ML-DmD4-c1    21 CNS ML-DmBG1-c1    23 CNS ML-DmBG2-c2    17 tumorous blood cells mbn2    42 ovary fGS/OSS    23 ovary OSC    36 ovary OSS    26 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    38 Schneider line 2 Sg4    15 embryonic 1182-4H    17 embryonic GM2    33 embryonic Kc167    28 embryonic S1    24 embryonic S3    31 leg disc CME L1    19 wing disc CME-W2    27 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    26 wing disc ML-DmD21    7 wing disc ML-DmD32    19 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    18 antennal disc ML-DmD20-c5    15 mixed discs ML-DmD4-c1    21 CNS ML-DmBG1-c1    23 CNS ML-DmBG2-c2    17 tumorous blood cells mbn2    42 ovary fGS/OSS    23 ovary OSC    36 ovary OSS    26 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    10 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    19 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    61 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    145 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    59 Ethanol 2.5% 3 hrs, larvae L3    29 Ethanol 5% 3 hrs, larvae L3    11 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    10 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    51 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    44 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    10 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    19 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult  (61) Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult  (145) Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult  (59) Ethanol 2.5% 3 hrs, larvae L3  (29) Ethanol 5% 3 hrs, larvae L3    11 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    10 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (51) Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult  (44) Paraquat 10 mM 48 hrs, 4-day adult  (29) Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    10 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    19 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    61 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult  (145) Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    59 Ethanol 2.5% 3 hrs, larvae L3    29 Ethanol 5% 3 hrs, larvae L3    11 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    10 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    51 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    44 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    10 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    19 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    61 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    145 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    59 Ethanol 2.5% 3 hrs, larvae L3    29 Ethanol 5% 3 hrs, larvae L3    11 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    10 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    51 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    44 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    5 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    10 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    19 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    61 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    145 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    59 Ethanol 2.5% 3 hrs, larvae L3    29 Ethanol 5% 3 hrs, larvae L3    11 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    10 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    51 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    44 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    10 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    19 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult  (61) Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult  (145) Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult  (59) Ethanol 2.5% 3 hrs, larvae L3  29 Ethanol 5% 3 hrs, larvae L3    11 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    10 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (51) Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult  (44) Paraquat 10 mM 48 hrs, 4-day adult  29 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    10 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    19 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    61 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult  (145) Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    59 Ethanol 2.5% 3 hrs, larvae L3    29 Ethanol 5% 3 hrs, larvae L3    11 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    10 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    51 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    44 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    10 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    19 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    61 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    145 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    59 Ethanol 2.5% 3 hrs, larvae L3    29 Ethanol 5% 3 hrs, larvae L3    11 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    10 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    51 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    44 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_27 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0250823
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele partially lethal - majority die | recessive gishKG03891 viable gishCB02804 gishEY06451 gishEY15206 viable, with Scer\GAL4pnr-MD237 gishGD10588 Sterility Allele fertile gishEY06451 gishEY15206 male sterile gish04895 gishKG03891 male sterile | recessive gish04895 sterile | recessive gishMB896 Other Phenotypes Allele increased cell death, with Scer\GAL4ptc-559.1 gishEP3652 learning defective | adult stage gish9.197 memory defective | dominant gish04895 gishKG03891 memory defective | semidominant gishMB896 planar polarity defective, with Scer\GAL4hs.2sev gishGD10588 planar polarity defective | somatic clone gishe01759 visible gish1 visible, with Scer\GAL4pnr-MD237 gishGD10588 Phenotype manifest in Allele cell | apical | somatic clone, with Scer\GAL4Act5C.PI gishGD10588 eye gish1 investment cone gish04895 lamina anlage glial cell | ectopic gish1 lamina anlage glial cell | ectopic | somatic clone gish1 lamina neuropil | ectopic gish1 lamina neuropil | ectopic | somatic clone gish1 mature eight-cell ommatidial precursor cluster, with Scer\GAL4sev.PU gishGD10588 mature eight-cell ommatidial precursor cluster | somatic clone gishe01759 minor mitochondrial derivative gish04895 morphogenetic furrow | somatic clone gish1 ommatidial precursor cluster | somatic clone gishe01759 ommatidium gish1 ommatidium, with Scer\GAL4hs.2sev gishGD10588 onion stage spermatid gish04895 photoreceptor cell gish1 spermatogonium, with Scer\GAL4ptc-559.1 gishEP3652 subretinal glial cell | ectopic gish1 subretinal glial cell | ectopic | somatic clone gish1 trichogen cell, with Scer\GAL4pnr-MD237 gishGD10588 trichome | supernumerary, with Scer\GAL4pnr-MD237 gishGD10588 wing blade | pupal stage | somatic clone, with Scer\GAL4Act5C.PI gishGD10588 wing hair | somatic clone | supernumerary gishe01759 wing hair | supernumerary, with Scer\GAL4dpp.blk1 gishGD10588 wing hair | supernumerary, with Scer\GAL4en-e16E gishGD10588 gishdsRNA.Scer\UAS
Classical Alleles ( 48 )
For All Classical Alleles Show
Allele of gish Class Mutagen Stocks Known lesion gish04895 P-element activity 1 Yes gishB184 1 -- gishc00662 piggyBac transposase 1 -- gishc02243 piggyBac transposase 1 -- gishc05910 piggyBac transposase 1 -- gishc06974 piggyBac transposase 1 -- gishCB-6487-3 1 -- gishd02946 P-element activity 1 -- gishd04764 P-element activity 1 -- gishd07242 P-element activity 1 -- gishe01759 piggyBac transposase 1 -- gishEY06451 P-element activity 1 -- gishEY15206 P-element activity 1 -- gishf01138 piggyBac transposase 1 -- gishf01841 piggyBac transposase 1 -- gishf02822 piggyBac transposase 1 -- gishf03068 piggyBac transposase 1 -- gishGS10076 1 Yes gishKG03891 P-element activity 1 Yes gishMI00340 1 -- gishNP1352 1 -- gishNP2152 1 -- gishNP3014 1 -- gishNP5387 1 -- gishNP5405 1 -- gish1 0 Yes gish9.197 0 Yes gishBr P-element activity 0 -- gishc01041 0 -- gishc01495 piggyBac transposase 0 -- gishc01861 piggyBac transposase 0 -- gishCB02804 P-element activity 0 Yes gishCPTI002023 piggyBac transposase 0 Yes gishCPTI004113 piggyBac transposase 0 Yes gishd04071 P-element activity 0 -- gishd07219 P-element activity 0 -- gishd09551 P-element activity 0 -- gishDG16412 P-element activity 0 -- gishe03307 piggyBac transposase 0 -- gishEP3057 P-element activity 0 -- gishEP3652 P-element activity 0 -- gishEP3726 P-element activity 0 -- gishf05275 0 -- gishG38 P-element activity 0 Yes gishMB896 0 Yes gishP144 P-element activity 0 Yes gishP232 P-element activity 0 Yes gishSpider 0 Yes
Alleles Carried on Transgenic Constructs ( 15 )
For All Alleles Carried on Transgenic Constructs Show
Allele of gish Class Mutagen Stocks Known lesion gishD187N.Scer\UAS.T:Hsap\MYC in vitro construct - regulatory fusion in vitro construct - coding region fusion in vitro construct - site directed mutagenesis 2 Yes gishScer\UAS.RB.T:Hsap\MYC in vitro construct - regulatory fusion in vitro construct - coding region fusion 2 Yes gishScer\UAS.RF.T:Hsap\MYC in vitro construct - regulatory fusion in vitro construct - coding region fusion in vitro construct - deletion 2 Yes gishGD10588 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes gishGL00005 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes gishHMS01609 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes gishJF02903 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes gishKK108680 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes gishdsRNA.Scer\UAS in vitro construct - regulatory fusion in vitro construct - RNAi 0 Yes gishL.Scer\UAS in vitro construct - regulatory fusion 0 Yes gishNIG.6963R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes gishS.Scer\UAS in vitro construct - regulatory fusion 0 Yes gishScer\UAS.cHa in vitro construct - regulatory fusion 0 Yes gishScer\UAS.cTa in vitro construct - regulatory fusion 0 Yes gishScer\UAS.T:Zzzz\FLAG in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)bxd100 (Spradling et al., 1999, BDGP Project Members, 1994-1999) Df(3R)Exel6268 (Ryder, 2004.4.26) Df(3R)Exel7329 (Ryder, 2004.4.26)
Not disrupted in	Df(3R)sbd105 (Kennison, 1995.6.21)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD10588} NA P{KK108680} NA P{NIG.6963R} NA P{TRiP.GL00005} NA P{TRiP.HMS01609} NA P{TRiP.JF02903} NA P{UAS-gish.FLAG} NA P{UAS-gish.H} NA P{UAS-gish.IR2} NA P{UAS-gish.KD.myc} NA P{UAS-gish.L} NA P{UAS-gish.RB.myc} NA P{UAS-gish.RF.myc} NA P{UAS-gish.S} NA P{UAS-gish.T} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap P{lacW}gishP144 No P{lacW}gishP232 No P{lArB}gishMB896 No P{PZ}gish04895 No insertion of mobile activating element P{EP}gishEP3057 NA P{EP}gishEP3652 NA P{EP}gishEP3726 NA P{EPgy2}gishEY06451 NA P{EPgy2}gishEY15206 NA P{GSV1}EP-207EP-207 NA P{GSV6}gishGS10076 NA P{XP}gishd02946 NA P{XP}gishd04071 NA P{XP}gishd04764 NA P{XP}gishd07219 NA P{XP}gishd07242 NA P{XP}gishd09551 NA miscellaneous insertions ?{}gish1 NA Mi{MIC}gishMI00340 NA P{(loxP.w.-110+276)w}gishBr NA P{CaryP}attP52 NA P{PTT-GB}gishCB02804 NA P{PTT-GB}gishSpider NA P{PTT-un1}gishG38 NA P{RS3}gishCB-6487-3 NA P{SUPor-P}gishKG03891 NA P{wHy}gishDG16412 NA PBac{5HPw+}gishB184 NA PBac{681.P.FSVS-1}gishCPTI002023 NA PBac{806.LOX-SVS-2}gishCPTI004113 NA PBac{PB}gishc00662 NA PBac{PB}gishc01041 NA PBac{PB}gishc01495 NA PBac{PB}gishc01861 NA PBac{PB}gishc02243 NA PBac{PB}gishc05910 NA PBac{PB}gishc06974 NA PBac{PB}gishc07032 NA PBac{RB}gishe01759 NA PBac{RB}gishe03307 NA PBac{WH}gishf01138 NA PBac{WH}gishf01841 NA PBac{WH}gishf02822 NA PBac{WH}gishf03068 NA PBac{WH}gishf05275 NA insertion of enhancer trap binary system P{GawB}gish9.197 No P{GawB}gishNP1352 No P{GawB}gishNP2152 No P{GawB}gishNP3014 No P{GawB}gishNP5387 No P{GawB}gishNP5405 No
Gene Ontology: Function, Process & Cellular Component ( 16 unique terms )
Terms Based on Experimental Evidence ( 14 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
glial cell migration inferred from mutant phenotype (Hummel et al., 2001, Hummel et al., 2002) negative regulation of actin nucleation inferred from mutant phenotype (Gault et al., 2012) olfactory learning inferred from mutant phenotype (Tan et al., 2010) ommatidial rotation inferred from genetic interaction with nmo (Weber et al., 2012) inferred from mutant phenotype (Weber et al., 2012) protein phosphorylation inferred from direct assay (Zhang et al., 2006) regulation of endocytic recycling inferred from mutant phenotype (Gault et al., 2012) regulation of establishment of planar polarity inferred from mutant phenotype (Weber et al., 2012) regulation of trichome morphogenesis inferred from genetic interaction with mwh (Gault et al., 2012) inferred from mutant phenotype (Gault et al., 2012) spermatogenesis inferred from mutant phenotype (Castrillon et al., 1993) sperm individualization inferred from direct assay (Nerusheva et al., 2009) Wnt receptor signaling pathway inferred from mutant phenotype (Zhang et al., 2006)
Cellular Component
CV term Evidence References
nucleus inferred from direct assay (Nerusheva et al., 2009) plasma membrane inferred from direct assay (Frescas et al., 2006, Zhang et al., 2006, Khanna et al., 2010, Nerusheva et al., 2009) colocalizes_with plasma membrane inferred from direct assay (Gault et al., 2012) sperm individualization complex inferred from mutant phenotype (Nerusheva et al., 2009)
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
ATP binding inferred from electronic annotation with InterPro:IPR000719, InterPro:IPR017441 (FlyBase Curators et al., 2004-) protein serine/threonine kinase activity inferred from sequence or structural similarity (Spradling et al., 1999) inferred from sequence or structural similarity with UniProtKB:Q62763 (FlyBase, 1992-) non-traceable author statement (Morrison et al., 2000)
Biological Process
CV term Evidence References
protein phosphorylation non-traceable author statement (Morrison et al., 2000)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	gene_with_stop_codon_read_through (Jungreis et al., 2011) nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
gish - Aldh-III anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG10086 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG11279 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG12341 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG12942 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG14427 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG15043 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG17834 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG32425 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG3706 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG4098 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG4282 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG4415 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - CG5746 experimental knowledge based (Guruharsha et al., 2011) gish - CG7049 experimental knowledge based (Guruharsha et al., 2011) gish - CTPsyn anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - Ccs experimental knowledge based (Guruharsha et al., 2011) gish - Gadd34 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - Kr-h1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - Oamb anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - Tim8 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - Tpi anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - Tsp29Fb anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - cv anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - htl anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - lin-28 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - olf186-F anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - tor anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) gish - vir-1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions gish allele Gene References gish1 ey (Hummel et al., 2002) hh (Hummel et al., 2002) so (Hummel et al., 2002) unspecified pbl (Gregory et al., 2007)
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 72425 DroID - A comprehensive database of gene and protein interactions. • FBgn0250823 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 49701 SignaLink - A protein-protein and protein-miRNA interaction database with multi-layered structure and multiple confidence scores. • Q4AB31
Orthologs
OrthoDB Orthologs (51) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6G1N24 Dipteran inclusive ortholog search EOG6WDDM5 Insect inclusive ortholog search EOG6PVMV1 Arthropod inclusive ortholog search EOG6TDZ1M Metazoa inclusive ortholog search EOG6GJBGJ
Orthologs in Drosophila Species (EOG6G1N24)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\gish     Drosophila simulans   Dsim\GD19086 Y   Drosophila sechellia   Dsec\GM15143 Y   Drosophila erecta   Dere\GG16991 Y   Drosophila yakuba   Dyak\GE24384 Y   Drosophila ananassae   Dana\GF18486 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA19988 Y   Drosophila persimilis   Dper\GL21596 Y   Drosophila willistoni   Dwil\GK13771 Y   Drosophila virilis   Dvir\GJ23721 Y   Drosophila mojavensis   Dmoj\GI22941 Y   Drosophila grimshawi   Dgri\GH19542 Y
Orthologs in non-Drosophila Dipterans (EOG6WDDM5)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL004351   Anopheles gambiae Malaria mosquito  Agam\AGAP003997   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ008898
Orthologs in non-Dipteran Insects (EOG6PVMV1)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB55646   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG007972   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH10949   Atta cephalotes Leafcutter ant  Acep\ACEP20098   Camponotus floridanus Florida carpenter ant  Cflo\CFLO19331   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL19778   Linepithema humile Argentine ant  Lhum\LH11855   Pogonomyrmex barbatus Red harvester ant  Pbar\PB26030   Acyrthosiphon pisum Pea aphid  Apim\ACYPI008713   Bombyx mori Silkmoth  Bmor\BGIBMGA001512   Pediculus humanus Human body louse  Phum\PHUM048320   Tribolium castaneum Red flour beetle  Tcas\TC001738   Tribolium castaneum Red flour beetle  Tcas\TC005606
Orthologs in non-Insect Arthropods (EOG6TDZ1M)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\FRAT2   Ixodes scapularis Deer tick  Isca\ISCW009144
Orthologs in non-Arthropod Metazoa (EOG6GJBGJ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\csnk-1   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_007973gn   Danio rerio Zebrafish  Drer\csnk1g2a   Danio rerio Zebrafish  Drer\csnk1g1   Xenopus tropicalis Western clawed frog  Xtro\csnk1g2   Xenopus tropicalis Western clawed frog  Xtro\csnk1g3   Xenopus tropicalis Western clawed frog  Xtro\csnk1g1   Gallus gallus Domestic chicken  Ggal\CSNK1G1   Mus musculus House mouse  Mmus\Csnk1g2   Mus musculus House mouse  Mmus\Csnk1g3   Mus musculus House mouse  Mmus\Csnk1e   Mus musculus House mouse  Mmus\Csnk1g1   Rattus norvegicus Norway rat  Rnor\Csnk1g3   Rattus norvegicus Norway rat  Rnor\Csnk1g2   Rattus norvegicus Norway rat  Rnor\ENSRNOG00000037011   Rattus norvegicus Norway rat  Rnor\Csnk1g1   Rattus norvegicus Norway rat  Rnor\ENSRNOG00000037015   Rattus norvegicus Norway rat  Rnor\ENSRNOG00000037017   Homo sapiens Human  Hsap\CSNK1G3   Homo sapiens Human  Hsap\CSNK1G2   Homo sapiens Human  Hsap\CSNK1G1
Human Orthologs (3)
Gene OMIM HGNC Hsap\CSNK1G3     Hsap\CSNK1G2     Hsap\CSNK1G1
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD19086 Drosophila sechellia Dsec\GM15143 Drosophila erecta Dere\GG16991 Drosophila yakuba Dyak\GE24384 Drosophila ananassae Dana\GF18486 Drosophila pseudoobscura pseudoobscura Dpse\GA19988 Drosophila persimilis Dper\GL21596 Drosophila willistoni Dwil\GK13771 Drosophila virilis Dvir\GJ23721 Drosophila mojavensis Dmoj\GI22941 Drosophila grimshawi Dgri\GH19542
Stocks & Reagents
Stocks Listed in FlyBase ( 36 )
Harvard	- P{XP}gishd02946 - P{XP}gishd04764 - P{XP}gishd07242 - PBac{PB}gishc00662 - PBac{PB}gishc02243 - PBac{PB}gishc05910 - PBac{PB}gishc06974 - PBac{RB}gishe01759 - PBac{WH}gishf01138 - PBac{WH}gishf01841 - PBac{WH}gishf02822
VDRC	v106826 P{KK108680}VIE-260B
	More stocks available...
Genomic Clones ( 2 )
	BACR05P04 BACR37I18 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 291 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	AT18609 LD28216 LD30931 LD31233 SD09393
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT30246 GM03462 GM04463 GM04971 LD01021 LD01514 LD04357 LD08007 LD08116 LD09417 LD10476 LD20615 LD28505 LD30581 LD35770 LD36665 LD37086 LD39541 LD46246 LP05389 RE05771 RE09637 RE12879 RE17459 RE19092 RE36679 RE41831 RE60139 RE63082 RE64439 RE71895 SD04628 SD22236
Other clones	5325 8531 11141 17789 29018 30627 36524 52483 57982 59763 66263 69878 73203 73912 76212 77224 78446 78938 79074 79281 99142 101793 105977 107442 108432 120741 121016 121023 121980 122832 145110 146146 146771 156052 157471 176359 214211.33 214341.37 214417.30 214437.40 272770 281648 571243 572782 bs21h06 bs27c08 bs48b01 bs53c11 bs67c03 bs67g03 bs69a07 bs70c03 bs83e12 CK01.18B.D1 CK01.26B.G1 CK01.33C.F7 CK01.33D.H5 CK01.39A.G12 CK01.63A.E10 CK01.67A.E4 CK01.71D.A10 CK01.74A.G6 CK01.74D.H5 CK01.76B.F12 CK01.77B.H8 CK01.80D.E5 CK01.81C.C8 CK01.81C.F7 CK01.88C.E12 CK01.88C.G9 CK01.91D.D2 CK01.93C.H2 CK01.96B.H8 CK01.98D.H9 CK01.107C.B4 CK01.111D.A2 CK01.115B.G5 CK01.115B.G10 CK01.117D.G9 CK01.122B.F10 CK01.122C.C4 CK01.133B.E4 CK01.170C.D12 Dmel_dig_008057_0717_1285 Dmel_neb_012499_0403_2992 Dmel_neb_013193_0592_0402 Dmel_neb_015522_0827_0485 EC26560 EC32303 EC37560 EC053464 EC054442 EC054947 EC056568 EK000925 EK025019 EK030213 EK030216 EK038317 EK043759 EK052734 EK052750 EK057026 EK058259 EK058731 EK059252 EK059556 EK060364 EK062207 EK062519 EK064224 EK064244 EK069627 EK069652 EK071845 EK072961 EK074864 EK076429 EK081303 EK089103 EK090438 EK093453 EK094142 EK101950 EK107441 EK111716 EK124429 EK130012 EK136739 EK139754 EK147242 EK160121 EK162963 EK163452 EK164721 EK167314 EK168218 EK169710 EK172645 EK174159 EK178637 EK180243 EK184538 EK185804 EK194230 EK197213 EK202249 EK206238 EK206824 EK208604 EK208931 EK214604 EK221609 EK228053 EK228825 EK231613 EK233352 EK244848 EK245433 EK249130 EK249344 EK252629 EK261508 EK272016 EK294607 EK299662 EN15903 EN17045 EP00304 EP04252 EP10245 EP11460 EP12055 EP16834 EP19746 EP21527 ESG013c.E21_A11 ESG0110a.E21_H10 FGH112D04 FGM318C11 HL07970 IP06893 IP06993 IP07093 IP07193 LD31187 RP003412691 RP004039280 RP004073458 RP004075340 RP004096764 RP004122492 RP004124087 RP004129131 RP004131453 RP004144925 RP004146480 RP004151000 RP004152064 RP004152731 RP004155836 RP004163381 RP004164740 RP004168798 RP004195493 RP004202501 RP004210581 RP004212961 RP004215015 RP004215089 RP004216059 RP004216079 RP004216716 RP004219570 RP004220038 RP004220530 RP004223666 RP004227351 RP004235083 RP004236657 RP004246271 RP004251471 RP004251758 RP004256622 RP004259380 RP004296962 RP004318708 RP004326512 RP004327912 RP004333932 RP004337381 RP004339466 RP004339961 RP004345865 RP004354403 RP004397762 RP004416603 RP004427130 RP004428506 RP004459906 RP004475722 RP004483292 RP004494896 RP004497897 RP004500744 RP004508575 RP004517525 RP004519642 RP004526473 RP004534690 RP004546857 RP004556318 UUGC0384
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0250823 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 49701
Antibody Information
	polyclonal (Tan et al., 2010)
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: gish CKI-related (Hummel, 2001.3.14)
Source for database merge of	Source for merge of: CKI-related CG6963 (Misra, 2000.8.9) Source for merge of: gish anon-WO0118547.425 (FlyBase, 1996-) Source for merge of: gish NEST:bs27c08 (FlyBase, 1996-)
Additional comments	Source for merge of gish anon-WO0118547.425 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
	The gish product phosphorylates the arr protein. (Zhang et al., 2006) When dsRNA constructs are made and transiently transfected into S2 cells in RNAi experiments, an increase in the proportion of S phase cells and/or aneuploidy, an increase in the proportion of G2/M phase cells, and increase in in mitotic index, and spindle abnormalities are seen. (Bettencourt-Dias et al., 2004) dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology. (Kiger et al., 2003) gish, so, ey and hh act in the posterior region of the eye disc to prevent precocious glial cell migration. (Hummel et al., 2002) Area matching Drosophila EST AA949934. This EST has sequence similarity to mammalian Casein kinase genes. (Davies, 2001.3.15) gish may be part of a repulsive signaling mechanism coordinating glial migration and neuronal development in the developing eye. (Hummel et al., 2001) In mutants, glial cells prematurely migrate into the ectopic positions anterior to the photoreceptors. As a consequence, a subset of photoreceptor axons projects anteriorly, suggesting an instructive role for the glial cells in axon pathfinding. Furthermore, gish mutant glial cells also inappropriately adhere to and migrate along Bolwigs nerve. (Hummel et al., 2001) Postmeiotic differentiation defect. (Castrillon et al., 1993)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_080202 NM_169711 NM_169712 NM_169713 NM_176506 NM_001014626 NM_001014627 NM_001014628 NM_001170157 NM_001260208 NM_001260209 NM_001275695 NM_001275696 RefSeq (Proteins) • NP_524941 NP_732123 NP_732124 NP_732125 NP_788683 NP_001014626 NP_001014627 NP_001014628 NP_001163628 NP_001247137 NP_001247138 NP_001262624 NP_001262625 DDBJ / EMBL / GenBank • AA201386 AA264321 AA949351 AA949934 AA950799 AAF55293 AAF55293.1 AAF55294 AAF55294.2 AAN13703 AAN13703.2 AAN13704 AAN13704.2 AAN71085 AAO41569 AAO41569.1 AAO45227 AAX52956 AAX52957 AAX52958 ACZ94924 AFH06455 AFH06456 AGB96004 AGB96005 AI456919 AI542884 AI946186 AI946515 AQ073361 AW942879 AW944594 AX094301 AZ300980 BF502789 BG638622 BH614994 BT001330 BT004871 CL610185 CZ466637 CZ467209 CZ467210 CZ467509 CZ467799 CZ467800 CZ470351 CZ471134 CZ471180 CZ473091 CZ473092 CZ473719 CZ474118 CZ475598 CZ475612 CZ476803 CZ479574 CZ481077 CZ483625 CZ484328 CZ485373 CZ485374 CZ485628 Entrez Gene - A searchable database of RefSeq genes. • 49701 UniProtKB/TrEMBL • Q4AB31 Q8IHB0 Q8INB6 Q9VEX2 Q59DW8 Q86BR9 Q86NK8
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Protein kinase, catalytic domain (IPR000719) Serine/threonine-protein kinase, active site (IPR008271) Protein kinase-like domain (IPR011009) Protein kinase, ATP binding site (IPR017441) Casein kinase 1 gamma C-terminal (IPR022247)
Linkouts
	BioGRID - A database of protein and genetic interactions • 72425 DroID - A comprehensive database of gene and protein interactions. • FBgn0250823 DRSC - Results from RNAi screens. • FBgn0250823 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0250823 FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0250823 FlyReactome - A curated knowledgebase of Drosophila melanogaster pathways • 205601 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 49701 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 49701 modMine - Data generated by the modENCODE project. • FBgn0250823 SignaLink - A protein-protein and protein-miRNA interaction database with multi-layered structure and multiple confidence scores. • Q4AB31
Synonyms & Secondary IDs ( 19 )
Reported As
Symbol Synonym	anon-WO0118547.425   CG6963 (Morin et al., 2001, Brody et al., 2002, Hummel, 2001.3.14, Morrison et al., 2000, Molnar et al., 2006, Keleman et al., 2009.8.5, Perkins et al., 2009, Khanna et al., 2010, Ni et al., 2011.7.19, Weber et al., 2012) CK1 (Nerusheva et al., 2007) CK1γ (Davidson et al., 2009) CK1γ (Meng et al., 2011, Weber et al., 2012) CK1-γ (Gault et al., 2012) CKI-related   CKIγ (Hummel et al., 2002, Jia et al., 2005) gish (Tan et al., 2010, Liebl et al., 2006, Nerusheva et al., 2007, Jia et al., 2005, Stuart et al., 2007, Buszczak et al., 2007, Molnar et al., 2006, Jungreis et al., 2011, Markstein et al., 2008, Rathke et al., 2007, Nerusheva et al., 2009, Bozas et al., 2009, Davidson et al., 2009, Mattila et al., 2008, Silicheva et al., 2010, Jungreis et al., 2011, Japanese National Institute of Genetics, 2012.5.21, Gault et al., 2012, Weber et al., 2012, Gurudatta et al., 2012) Gish (Zhang et al., 2006, Meng et al., 2011) Hrr25 (Spradling, 1999.12.9, Spradling et al., 1999, ) ms(3)89B (Meister and Braun, 1995.10, Kennison, 1995.6.21, BDGP Project Members, 1994-1999, Castrillon et al., 1993, ) NEST:bs27c08   spider (Fernandez-Gonzalez and Zallen, 2011)
Name Synonym	casein kinase 1γ (Meng et al., 2011) CKIg-like (Morrison et al., 2000) gilgamesh (Tan et al., 2010, Hummel, 2001.3.14, Hummel et al., 2001, Gregory et al., 2007, Frescas et al., 2006, Pandey et al., 2005, Rathke et al., 2007, Nerusheva et al., 2009, Bozas et al., 2009, Eddison et al., 2012, Gault et al., 2012, Weber et al., 2012) Gilgamesh (Zhang et al., 2006, Shalaby et al., 2009, Khanna et al., 2010) NEST:bs27c08   Spider (Martin et al., 2009, Cao et al., 2008, Martin et al., 2010, Abreu-Blanco et al., 2011, Daniels et al., 2012) spider (Fernandez-Gonzalez et al., 2009)
Secondary FlyBase IDs
	FBgn0011253 FBgn0038411 FBgn0045173 FBgn0062017
References ( 93 )
Generate a list of	All references relating to this gene ( 93 )
List References by type	Research paper  ( 43 ) Supplementary material  ( 11 ) Review  ( 3 ) Personal communication to FlyBase  ( 26 ) Abstract  ( 2 ) FlyBase analysis  ( 3 ) Stock list  ( 1 ) Patent  ( 1 ) DNA/RNA sequence record  ( 1 ) Curated genome annotation  ( 2 )
Recent research papers ( 10 )
	Daniels et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(22): 8588--8593 Multiscale diffusion in the mitotic Drosophila melanogaster syncytial blastoderm. [FBrf0218444] Eddison et al., 2012, PLoS ONE 7(12): e51684 A genetic screen for olfactory habituation mutations in Drosophila: analysis of novel foraging alleles and an underlying neural circuit. [FBrf0220425] Gault et al., 2012, J. Cell Biol. 196(5): 605--621 Drosophila CK1-γ, gilgamesh, controls PCP-mediated morphogenesis through regulation of vesicle trafficking. [FBrf0217630] Gurudatta et al., 2012, Dev. Biol. 369(1): 124--132 The BEAF insulator regulates genes involved in cell polarity and neoplastic growth. [FBrf0219796] Shaukat et al., 2012, PLoS ONE 7(10): e47447 A screen for selective killing of cells with chromosomal instability induced by a spindle checkpoint defect. [FBrf0219770] Weber et al., 2012, Genetics 191(1): 145--162 Novel regulators of planar cell polarity: a genetic analysis in Drosophila. [FBrf0218210] Abreu-Blanco et al., 2011, J. Cell Biol. 193(3): 455--464 Cell wound repair in Drosophila occurs through three distinct phases of membrane and cytoskeletal remodeling. [FBrf0213583] Fernandez-Gonzalez and Zallen, 2011, Phys. Biol. 8(4): 045005 Oscillatory behaviors and hierarchical assembly of contractile structures in intercalating cells. [FBrf0214479] Jungreis et al., 2011, Genome Res. 21(12): 2096--2113 Evidence of abundant stop codon readthrough in Drosophila and other metazoa. [FBrf0216845] Meng et al., 2011, Mol. Biol. Cell 22(16): 2834--2847 Role for casein kinase 1 in the phosphorylation of Claspin on critical residues necessary for the activation of Chk1. [FBrf0216930] Show all research papers ...
Recent reviews (0)
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