Gene Dmel\CG42313

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General Information

Symbol

Dmel\CG42313

Species

D. melanogaster

Name

Annotation symbol

CG42313

Feature type

protein_coding_gene

FlyBase ID

FBgn0259213

Gene Model Status

Current

Stock availability

10 publicly available

Also Known As

BG:DS01219.3, BG:DS03144.1, CG15277, CG33515

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

35B7-35B7

Sequence location

2L:14,907,570..14,972,300 [-]

Genomic Maps

Select View:

Summary Information

Automatically generated summary

See sections below for more information

This gene is referred to in FlyBase by the symbol Dmel\CG42313 (FBgn0259213). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 12 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum. It has one annotated transcript and one annotated polypeptide. Protein features are: CD80-like, immunoglobulin C2-set; Immunoglobulin V-set; Immunoglobulin subtype; Immunoglobulin-like domain; Immunoglobulin-like fold. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Gene sequence location is 2L:14907570..14972300.

User Contributed Data

Beta version, feedback welcome

Recent Updates

Description

What does this section display?

This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).

What does this section not display?

This section does not currently display links that were removed or gene model changes.

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FB2013_03

FB2013_02

All updates

Click here to see a list of all updates to this record from FB2010_08 and on.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

35B7-35B7

Limits computationally determined from genome sequence between P{EP}elB^EP2039&P{PZ}osp^rJ571 and P{lacW}Su(H)^k07904

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

Left of (cM)

Right of (cM)

Notes

Gene Model & Products

Please see the GBrowse view of Dmel\CG42313 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Comments on Gene Model

Gene merge based on protein alignment (BLASTX) data

Gene merge based on EST/cDNA data

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

CG42313-RA

FBtr0299711

NM_001014485

5217

1064

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

CG42313-PA

FBpp0288989

114.1

1064

7.35

NP_001014485

AAX52666

Additional Polypeptide Data & Comments

Reported size (kDa)

Comments

External Data

Linkouts

Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

CD80-like, immunoglobulin C2-set (IPR013162)

Immunoglobulin-like fold (IPR013783)

Immunoglobulin V-set (IPR013106)

Immunoglobulin-like domain (IPR007110)

Immunoglobulin subtype (IPR003599)

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

Q59DZ1

Mapped Features

Mapped Features have been reorganized, please see this article for details.

Additional mapped features and mutations can be found on GBrowse or related reports.

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

Crossreferences

Expression Data

Transcript Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization (GO Cellular Component)

CV term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

Reference

See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)

	Styles
	Linear
	Logarithmic
	Heatmap
	Back-to-back
	Scales
	gene max expression
	Moderate expression bin max
	High level expression bin max
	Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues.
[download data (TSV)]

Guide to FlyAtlas expression level colors
	No expression (0 - 9.999)
	Low expression (10 - 99.999)
	Moderate expression (100 - 499.999)
	High level expression (500 - 999.999)
	Very high expression (>999.999)

Heatmap
Tissue		Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)

modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		7
central nervous system, pupae P8		22
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		5
head, mated 4-day female		4
head, mated 20-day female		4
head, mated 1-day male		9
head, mated 4-day male		8
head, mated 20-day male		9
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		7
carcass, larvae L3 wandering		1
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		0
Expression Level Scale		Very low Low Moderate

Linear, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		7
central nervous system, pupae P8		22
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		5
head, mated 4-day female		4
head, mated 20-day female		4
head, mated 1-day male		9
head, mated 4-day male		8
head, mated 20-day male		9
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		7
carcass, larvae L3 wandering		1
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		0
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		7
central nervous system, pupae P8		22
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		5
head, mated 4-day female		4
head, mated 20-day female		4
head, mated 1-day male		9
head, mated 4-day male		8
head, mated 20-day male		9
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		7
carcass, larvae L3 wandering		1
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		7
central nervous system, pupae P8		22
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		5
head, mated 4-day female		4
head, mated 20-day female		4
head, mated 1-day male		9
head, mated 4-day male		8
head, mated 20-day male		9
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		7
carcass, larvae L3 wandering		1
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		0
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		7
central nervous system, pupae P8		22
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		5
head, mated 4-day female		4
head, mated 20-day female		4
head, mated 1-day male		9
head, mated 4-day male		8
head, mated 20-day male		9
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		7
carcass, larvae L3 wandering		1
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		0
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		7
central nervous system, pupae P8		22
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		5
head, mated 4-day female		4
head, mated 20-day female		4
head, mated 1-day male		9
head, mated 4-day male		8
head, mated 20-day male		9
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		7
carcass, larvae L3 wandering		1
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		0
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		7
central nervous system, pupae P8		22
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		5
head, mated 4-day female		4
head, mated 20-day female		4
head, mated 1-day male		9
head, mated 4-day male		8
head, mated 20-day male		9
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		7
carcass, larvae L3 wandering		1
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		7
central nervous system, pupae P8		22
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		5
head, mated 4-day female		4
head, mated 20-day female		4
head, mated 1-day male		9
head, mated 4-day male		8
head, mated 20-day male		9
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		0
digestive system, 1-day adult		0
digestive system, 4-day adult		0
digestive system, 20-day adult		0
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		7
carcass, larvae L3 wandering		1
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Tissue		Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male

modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages.
[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		2
embryo 16-18hr		5
embryo 18-20hr		6
embryo 20-22hr		5
embryo 22-24hr		6
larva L1		5
larva L2		1
larva L3 12hr old		0
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		1
white prepupae new		1
white prepupae 12hr		2
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		3
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate

Linear, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		2
embryo 16-18hr		5
embryo 18-20hr		6
embryo 20-22hr		5
embryo 22-24hr		6
larva L1		5
larva L2		1
larva L3 12hr old		0
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		1
white prepupae new		1
white prepupae 12hr		2
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		3
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		2
embryo 16-18hr		5
embryo 18-20hr		6
embryo 20-22hr		5
embryo 22-24hr		6
larva L1		5
larva L2		1
larva L3 12hr old		0
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		1
white prepupae new		1
white prepupae 12hr		2
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		3
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		2
embryo 16-18hr		5
embryo 18-20hr		6
embryo 20-22hr		5
embryo 22-24hr		6
larva L1		5
larva L2		1
larva L3 12hr old		0
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		1
white prepupae new		1
white prepupae 12hr		2
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		3
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		2
embryo 16-18hr		5
embryo 18-20hr		6
embryo 20-22hr		5
embryo 22-24hr		6
larva L1		5
larva L2		1
larva L3 12hr old		0
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		1
white prepupae new		1
white prepupae 12hr		2
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		3
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate

log, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		2
embryo 16-18hr		5
embryo 18-20hr		6
embryo 20-22hr		5
embryo 22-24hr		6
larva L1		5
larva L2		1
larva L3 12hr old		0
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		1
white prepupae new		1
white prepupae 12hr		2
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		3
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		2
embryo 16-18hr		5
embryo 18-20hr		6
embryo 20-22hr		5
embryo 22-24hr		6
larva L1		5
larva L2		1
larva L3 12hr old		0
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		1
white prepupae new		1
white prepupae 12hr		2
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		3
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		2
embryo 16-18hr		5
embryo 18-20hr		6
embryo 20-22hr		5
embryo 22-24hr		6
larva L1		5
larva L2		1
larva L3 12hr old		0
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		1
white prepupae new		1
white prepupae 12hr		2
white prepupae 24hr		4
pupae 2d postWPP		5
pupae 3d postWPP		3
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Developmental Stage		Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day

modENCODE Temporal Expression Data (Graveley et al., 2011)

modENCODE Cell Lines RNA-Seq

modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		1
cold shock, 4-day adult		1
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		1
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate

Linear, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		1
cold shock, 4-day adult		1
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		1
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		1
cold shock, 4-day adult		1
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		1
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		1
cold shock, 4-day adult		1
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		1
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		1
cold shock, 4-day adult		1
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		1
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate

log, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		1
cold shock, 4-day adult		1
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		1
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		1
cold shock, 4-day adult		1
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		1
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		1
cold shock, 4-day adult		1
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		0
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		1
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		1
Zinc 5 mM 12 hrs, larvae L3		1
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		0
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Treatment		Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3

Expression Clusters

A cluster of genes with similar mRNA expression dynamics across development.

(The modENCODE Consortium, 2010, Graveley et al., 2011)

External Data & Images

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0259213

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

•

CG15275-RA;Stencil:2L:14901837:14893466:GENSCAN;CG15277-RA;CG15276-RA;HDC02590

Alleles & Phenotypes

Summary of Allele Phenotypes

Lethality

Allele

partially lethal - majority die | pupal stage, with Scer\GAL4^pnr-MD237

CG42313^GD1151

viable, with Scer\GAL4^pnr-MD237

Other Phenotypes

Allele

visible, with Scer\GAL4^pnr-MD237

CG42313^GD1151

Phenotype manifest in

Allele

mesothoracic tergum, with Scer\GAL4^pnr-MD237

CG42313^GD1151

trichogen cell, with Scer\GAL4^pnr-MD237

CG42313^GD1151

Classical Alleles ( 4 )

For All Classical Alleles Show

Allele of CG42313	Stocks	Known lesion
CG42313^f06854	1	--
CG42313^MB08581	1	--
CG42313^MI01023	1	--
CG42313^MI07122	0	--

Alleles Carried on Transgenic Constructs ( 8 )

For All Alleles Carried on Transgenic Constructs Show

Allele of CG42313	Mutagen	Stocks	Known lesion
CG42313^GD14652	in vitro construct - RNAi in vitro construct - regulatory fusion	2	Yes
CG42313^GD1151	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG42313^GD14308	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG42313^KK111520	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG42313^KK112856	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG42313^KK114253	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG42313^GD2588	in vitro construct - RNAi in vitro construct - regulatory fusion	0	Yes
CG42313^GD92	in vitro construct - RNAi in vitro construct - regulatory fusion	0	Yes

Aneuploid Aberrations

Disrupted in

Df(2L)Exel7061

(Ryder, 2004.4.26)

Df(2L)Exel8033

(Ryder, 2004.4.26)

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

UAS construct

P{KK111520}

P{KK112856}

P{KK114253}

Insertions

Type of insertions

Name

Expression data

miscellaneous insertions

Mi{MIC}CG42313^MI01023

Mi{MIC}CG42313^MI07122

PBac{WH}CG42313^f06854

insertion of enhancer trap binary system

Mi{ET1}CG42313^MB08581

Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )

There is no information supporting a biological process, cellular component or molecular function term for this gene.

(Based on a review of available data before: 2006)

Terms Based on Experimental Evidence ( 0 terms )

Terms Based on Predictions or Assertions ( 0 terms )

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Interactions & Pathways

Summary of Physical Interactions

Summary of Genetic Interactions

Interacts with

Please look at the allele data for full details of the genetic interactions

CG42313 allele

Gene

References

External Data

Linkouts

BioGRID - A database of protein and genetic interactions

•

77924

DroID - A comprehensive database of gene and protein interactions.

•

FBgn0259213

InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.

•

3346206

Orthologs

OrthoDB Orthologs (102) - based on analysis using Dmel annotation version 5.41

OrthoDB Ortholog Groups

OrthoDB orthology group searches

(Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288)

Drosophila inclusive ortholog search

EOG6GB7RM

Dipteran inclusive ortholog search

EOG6DBTP1

Insect inclusive ortholog search

EOG6VMD9C

Arthropod inclusive ortholog search

EOG6W0VV0

Metazoa inclusive ortholog search

EOG6KM9VS

Orthologs in Drosophila Species (EOG6GB7RM)

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila melanogaster

fruit fly

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA13619

Drosophila persimilis

Dper\GL25736

Drosophila willistoni

Dwil\GK18073

Drosophila virilis

Dvir\GJ16040

Drosophila mojavensis

Dmoj\GI17336

Drosophila grimshawi

Dgri\GH10825

Orthologs in non-Drosophila Dipterans (EOG6DBTP1)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL010645

Anopheles gambiae

Malaria mosquito

Agam\AGAP009683

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ004618

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ801970

Orthologs in non-Dipteran Insects (EOG6VMD9C)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Apis mellifera

Western honey bee

Amel\GB44412

Apis mellifera

Western honey bee

Amel\GB44567

Apis mellifera

Western honey bee

Amel\GB51391

Apis mellifera

Western honey bee

Amel\GB51385

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG010973

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG002973

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG015654

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG012278

Acromyrmex echinatior

Panamanian leafcutter ant

Aech\AECH12129

Acromyrmex echinatior

Panamanian leafcutter ant

Aech\AECH12134

Acromyrmex echinatior

Panamanian leafcutter ant

Aech\AECH18125

Acromyrmex echinatior

Panamanian leafcutter ant

Aech\AECH27084

Acromyrmex echinatior

Panamanian leafcutter ant

Aech\AECH18126

Atta cephalotes

Leafcutter ant

Acep\ACEP15967

Atta cephalotes

Leafcutter ant

Acep\ACEP18094

Atta cephalotes

Leafcutter ant

Acep\ACEP14259

Atta cephalotes

Leafcutter ant

Acep\ACEP14261

Atta cephalotes

Leafcutter ant

Acep\ACEP10064

Atta cephalotes

Leafcutter ant

Acep\ACEP14257

Camponotus floridanus

Florida carpenter ant

Cflo\CFLO20322

Camponotus floridanus

Florida carpenter ant

Cflo\CFLO20321

Camponotus floridanus

Florida carpenter ant

Cflo\CFLO19620

Camponotus floridanus

Florida carpenter ant

Cflo\CFLO19784

Camponotus floridanus

Florida carpenter ant

Cflo\CFLO19787

Harpegnathos saltator

Jerdons jumping ant

Hsal\HSAL15704

Harpegnathos saltator

Jerdons jumping ant

Hsal\HSAL13107

Harpegnathos saltator

Jerdons jumping ant

Hsal\HSAL13105

Harpegnathos saltator

Jerdons jumping ant

Hsal\HSAL19224

Linepithema humile

Argentine ant

Lhum\LH14073

Linepithema humile

Argentine ant

Lhum\LH23073

Linepithema humile

Argentine ant

Lhum\LH16329

Linepithema humile

Argentine ant

Lhum\LH14075

Pogonomyrmex barbatus

Red harvester ant

Pbar\PB17568

Pogonomyrmex barbatus

Red harvester ant

Pbar\PB24465

Pogonomyrmex barbatus

Red harvester ant

Pbar\PB24472

Pogonomyrmex barbatus

Red harvester ant

Pbar\PB17567

Pogonomyrmex barbatus

Red harvester ant

Pbar\PB24878

Solenopsis invicta

Red fire ant

Sinv\SINV18656

Solenopsis invicta

Red fire ant

Sinv\SINV18418

Solenopsis invicta

Red fire ant

Sinv\SINV11008

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI008824

Bombyx mori

Silkmoth

Bmor\BGIBMGA008686

Bombyx mori

Silkmoth

Bmor\BGIBMGA004752

Bombyx mori

Silkmoth

Bmor\BGIBMGA005029

Bombyx mori

Silkmoth

Bmor\BGIBMGA005030

Pediculus humanus

Human body louse

Phum\PHUM004220

Pediculus humanus

Human body louse

Phum\PHUM313690

Tribolium castaneum

Red flour beetle

Tcas\TC009768

Tribolium castaneum

Red flour beetle

Tcas\TC008816

Tribolium castaneum

Red flour beetle

Tcas\TC016379

Tribolium castaneum

Red flour beetle

Tcas\TC004912

Tribolium castaneum

Red flour beetle

Tcas\TC008814

Orthologs in non-Insect Arthropods (EOG6W0VV0)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Daphnia pulex

Water flea

Dpux\JGI_V11_48816

Daphnia pulex

Water flea

Dpux\Tmem86b

Daphnia pulex

Water flea

Dpux\FAM176B

Daphnia pulex

Water flea

Dpux\PIGV

Daphnia pulex

Water flea

Dpux\JGI_V11_62190

Daphnia pulex

Water flea

Dpux\chrw

Daphnia pulex

Water flea

Dpux\COI

Daphnia pulex

Water flea

Dpux\JGI_V11_48347

Daphnia pulex

Water flea

Dpux\psbI

Daphnia pulex

Water flea

Dpux\BCAS4

Ixodes scapularis

Deer tick

Isca\ISCW003447

Ixodes scapularis

Deer tick

Isca\ISCW021651

Ixodes scapularis

Deer tick

Isca\ISCW019254

Ixodes scapularis

Deer tick

Isca\ISCW023035

Ixodes scapularis

Deer tick

Isca\ISCW011259

Ixodes scapularis

Deer tick

Isca\ISCW023036

Ixodes scapularis

Deer tick

Isca\ISCW007282

Ixodes scapularis

Deer tick

Isca\ISCW010905

Ixodes scapularis

Deer tick

Isca\ISCW014090

Ixodes scapularis

Deer tick

Isca\ISCW019960

Ixodes scapularis

Deer tick

Isca\ISCW018495

Ixodes scapularis

Deer tick

Isca\ISCW018916

Ixodes scapularis

Deer tick

Isca\ISCW003563

Ixodes scapularis

Deer tick

Isca\ISCW007919

Orthologs in non-Arthropod Metazoa (EOG6KM9VS)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_021747gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_012355gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_024881gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_028889gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_017023gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_007016gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_008771gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_021904gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_014031gn

Danio rerio

Zebrafish

Drer\ENSDARG00000086799

Human Orthologs (0)

Gene

OMIM

HGNC

AAA Orthologs (15) based on analysis using Dmel annotation version 4.3

Organism

Gene

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila erecta

Drosophila yakuba

Drosophila yakuba

Drosophila ananassae

Drosophila ananassae

Drosophila persimilis

Dper\GL25736

Drosophila willistoni

Dwil\GK18073

Drosophila virilis

Dvir\GJ16040

Drosophila virilis

Dvir\GJ16050

Drosophila mojavensis

Dmoj\GI17336

Drosophila mojavensis

Dmoj\GI17337

Drosophila grimshawi

Dgri\GH10827

Stocks & Reagents

Stocks Listed in FlyBase ( 10 )

Bloomington

26389

w¹¹¹⁸; Mi{ET1}CG42313^MB08581

34140

y¹ w^*; Mi{MIC}CG42313^MI01023/SM6a

Harvard

PBac{WH}CG42313^f06854

v103687

v106953

v107512

v24494

w¹¹¹⁸; P{GD1151}v24494

v30091

w¹¹¹⁸; P{GD14652}v30091

v30093

w¹¹¹⁸; P{GD14652}v30093

v36152

w¹¹¹⁸; P{GD14308}v36152/TM3

Genomic Clones ( 2 )

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones ( 22 )

Please Note

This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA Clones, Fully Sequenced

BDGP DGC clones