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Gene Dmel\Camta

General Information
Symbol	Dmel\Camta	Species	D. melanogaster
Name	Calmodulin-binding transcription activator	Annotation symbol	CG42332
Feature type	protein_coding_gene	FlyBase ID	FBgn0259234
Gene Model Status	Current	Stock availability	16 publicly available
Also Known As	dCAMTA, CG13952, DmCAMTA, CG8809, CG13953
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	45E1-45E1	Sequence location	2R:5,333,551..5,365,595 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Calmodulin-binding transcription activator is referred to in FlyBase by the symbol Dmel\Camta (CG42332, FBgn0259234). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; protein homodimerization activity. There is experimental evidence that it is involved in the biological process: response to light stimulus; positive regulation of transcription from RNA polymerase II promoter; deactivation of rhodopsin mediated signaling. 25 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; eye photoreceptor cell. It has 5 annotated transcripts and 5 annotated polypeptides. Protein features are: Ankyrin repeat; Ankyrin repeat-containing domain; CG-1; IQ motif, EF-hand binding site; Immunoglobulin E-set. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, during early pupal stages, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at moderate levels in the following post-embryonic organs or tissues: adult ovary. Gene sequence location is 2R:5333551..5365595.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2012_01	Sequence features HFA07272 BKN32864 BKN22244 HFA06441 HFA06440 BKN26994 Controlled Vocabulary Terms positive regulation of transcription from RNA polymerase II promoter RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 45E1-45E1   Limits computationally determined from genome sequence between P{lacW}wunk09507&P{lacW}l(2)k12402k12402 and P{EP}EP2165&P{lacW}l(2)k01301k01301
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Camta for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Due to an oversight in the implementation of gene annotation merges, one of the transcripts (and the corresponding polypeptide) of this gene were assigned non-unique symbols in r5.9. Although there were no conflicts within a given release, the same symbols were used for different isoforms in different releases. The affected gene product symbols have now been changed to symbols not used previously in the database; see individual transcript reports for details. Gene merge based on EST/cDNA data
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Camta-RB FBtr0299845  NM_001144153   6877   2005 Camta-RD FBtr0299846  NM_136647   6456   1881 Camta-RE FBtr0299847  NM_001144154   6339   1842 Camta-RF FBtr0300527  NM_001144152   6994   2044 Camta-RG FBtr0301766  NM_001169627   6871   2004
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Camta-PB   FBpp0289123   219.8   2005   7.58     NP_001137625   ACL83079 Camta-PD   FBpp0289124   208.0   1881   6.86     NP_610491   AAF58934 Camta-PE   FBpp0289125   204.1   1842   7.04     NP_001137626   ACL83080 Camta-PF   FBpp0289754   223.6   2044   7.14     NP_001137624   ACL83078 Camta-PG   FBpp0290980   219.7   2004   7.58     NP_001163098   ACZ94376
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • IQ motif, EF-hand binding site (IPR000048) Ankyrin repeat (IPR002110) CG-1 (IPR005559) Immunoglobulin E-set (IPR014756) Ankyrin repeat-containing domain (IPR020683)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA440801   AE013599 AAF58934   AE013599 ACL83078   AE013599 ACL83079   AE013599 ACL83080   AE013599 ACZ94376   AW942374   AY061208 AAL28756   BF505273   BI163394   BI356921   BP550727   CO177175   CO320836   CO344709   CZ488077   DQ902587 ABI94369   EC202805   EC258591   EL885724   EL885725   EL885852   EL885853   GH948701   GH949355   GH960954   GH961966   GH964014   GH966544   GH968092   GH971695   GH972964   GH973539   GH974332   GH974579   GH978721
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q95RQ6 A0SQK5 A1Z7V0 B7YZS4 B7YZU5 B7YZU4 E1JH18
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0259234    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0259234 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, during early pupal stages, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0259234 expression level Developmental Stage   Expression Level embryo 00-02hr    750 embryo 02-04hr    710 embryo 04-06hr    285 embryo 06-08hr    293 embryo 08-10hr    401 embryo 10-12hr    256 embryo 12-14hr    420 embryo 14-16hr    521 embryo 16-18hr    503 embryo 18-20hr    444 embryo 20-22hr    484 embryo 22-24hr    454 larva L1    203 larva L2    158 larva L3 12hr old    156 larva L3 puffstage 1-2    110 larva L3 puffstage 3-6    253 larva L3 puffstage 7-9    275 white prepupae new    289 white prepupae 12hr    298 white prepupae 24hr    413 pupae 2d postWPP    354 pupae 3d postWPP    279 pupae 4d postWPP    270 adult male 01day    441 adult male 05day    570 adult male 30day    524 adult female 01day    368 adult female 05day    509 adult female 30day    545 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (750) embryo 02-04hr  (710) embryo 04-06hr  (285) embryo 06-08hr  (293) embryo 08-10hr  (401) embryo 10-12hr  (256) embryo 12-14hr  (420) embryo 14-16hr  (521) embryo 16-18hr  (503) embryo 18-20hr  (444) embryo 20-22hr  (484) embryo 22-24hr  (454) larva L1  (203) larva L2  (158) larva L3 12hr old  (156) larva L3 puffstage 1-2  (110) larva L3 puffstage 3-6  (253) larva L3 puffstage 7-9  (275) white prepupae new  (289) white prepupae 12hr  (298) white prepupae 24hr  (413) pupae 2d postWPP  (354) pupae 3d postWPP  (279) pupae 4d postWPP  (270) adult male 01day  (441) adult male 05day  (570) adult male 30day  (524) adult female 01day  (368) adult female 05day  (509) adult female 30day  (545) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    750 embryo 02-04hr    710 embryo 04-06hr    285 embryo 06-08hr    293 embryo 08-10hr    401 embryo 10-12hr    256 embryo 12-14hr    420 embryo 14-16hr    521 embryo 16-18hr    503 embryo 18-20hr    444 embryo 20-22hr    484 embryo 22-24hr    454 larva L1    203 larva L2    158 larva L3 12hr old    156 larva L3 puffstage 1-2    110 larva L3 puffstage 3-6    253 larva L3 puffstage 7-9    275 white prepupae new    289 white prepupae 12hr    298 white prepupae 24hr    413 pupae 2d postWPP    354 pupae 3d postWPP    279 pupae 4d postWPP    270 adult male 01day    441 adult male 05day    570 adult male 30day    524 adult female 01day    368 adult female 05day    509 adult female 30day    545 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    750 embryo 02-04hr    710 embryo 04-06hr    285 embryo 06-08hr    293 embryo 08-10hr    401 embryo 10-12hr    256 embryo 12-14hr    420 embryo 14-16hr    521 embryo 16-18hr    503 embryo 18-20hr    444 embryo 20-22hr    484 embryo 22-24hr    454 larva L1    203 larva L2    158 larva L3 12hr old    156 larva L3 puffstage 1-2    110 larva L3 puffstage 3-6    253 larva L3 puffstage 7-9    275 white prepupae new    289 white prepupae 12hr    298 white prepupae 24hr    413 pupae 2d postWPP    354 pupae 3d postWPP    279 pupae 4d postWPP    270 adult male 01day    441 adult male 05day    570 adult male 30day    524 adult female 01day    368 adult female 05day    509 adult female 30day    545 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    750 embryo 02-04hr    710 embryo 04-06hr    285 embryo 06-08hr    293 embryo 08-10hr    401 embryo 10-12hr    256 embryo 12-14hr    420 embryo 14-16hr    521 embryo 16-18hr    503 embryo 18-20hr    444 embryo 20-22hr    484 embryo 22-24hr    454 larva L1    203 larva L2    158 larva L3 12hr old    156 larva L3 puffstage 1-2    110 larva L3 puffstage 3-6    253 larva L3 puffstage 7-9    275 white prepupae new    289 white prepupae 12hr    298 white prepupae 24hr    413 pupae 2d postWPP    354 pupae 3d postWPP    279 pupae 4d postWPP    270 adult male 01day    441 adult male 05day    570 adult male 30day    524 adult female 01day    368 adult female 05day    509 adult female 30day    545 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0259234 expression level Developmental Stage   Expression Level embryo 00-02hr    750 embryo 02-04hr    710 embryo 04-06hr    285 embryo 06-08hr    293 embryo 08-10hr    401 embryo 10-12hr    256 embryo 12-14hr    420 embryo 14-16hr    521 embryo 16-18hr    503 embryo 18-20hr    444 embryo 20-22hr    484 embryo 22-24hr    454 larva L1    203 larva L2    158 larva L3 12hr old    156 larva L3 puffstage 1-2    110 larva L3 puffstage 3-6    253 larva L3 puffstage 7-9    275 white prepupae new    289 white prepupae 12hr    298 white prepupae 24hr    413 pupae 2d postWPP    354 pupae 3d postWPP    279 pupae 4d postWPP    270 adult male 01day    441 adult male 05day    570 adult male 30day    524 adult female 01day    368 adult female 05day    509 adult female 30day    545 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (750) embryo 02-04hr  (710) embryo 04-06hr  (285) embryo 06-08hr  (293) embryo 08-10hr  (401) embryo 10-12hr  (256) embryo 12-14hr  (420) embryo 14-16hr  (521) embryo 16-18hr  (503) embryo 18-20hr  (444) embryo 20-22hr  (484) embryo 22-24hr  (454) larva L1  (203) larva L2  (158) larva L3 12hr old  (156) larva L3 puffstage 1-2  110 larva L3 puffstage 3-6  (253) larva L3 puffstage 7-9  (275) white prepupae new  (289) white prepupae 12hr  (298) white prepupae 24hr  (413) pupae 2d postWPP  (354) pupae 3d postWPP  (279) pupae 4d postWPP  (270) adult male 01day  (441) adult male 05day  (570) adult male 30day  (524) adult female 01day  (368) adult female 05day  (509) adult female 30day  (545) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    750 embryo 02-04hr    710 embryo 04-06hr    285 embryo 06-08hr    293 embryo 08-10hr    401 embryo 10-12hr    256 embryo 12-14hr    420 embryo 14-16hr    521 embryo 16-18hr    503 embryo 18-20hr    444 embryo 20-22hr    484 embryo 22-24hr    454 larva L1    203 larva L2    158 larva L3 12hr old    156 larva L3 puffstage 1-2    110 larva L3 puffstage 3-6    253 larva L3 puffstage 7-9    275 white prepupae new    289 white prepupae 12hr    298 white prepupae 24hr    413 pupae 2d postWPP    354 pupae 3d postWPP    279 pupae 4d postWPP    270 adult male 01day    441 adult male 05day    570 adult male 30day    524 adult female 01day    368 adult female 05day    509 adult female 30day    545 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    750 embryo 02-04hr    710 embryo 04-06hr    285 embryo 06-08hr    293 embryo 08-10hr    401 embryo 10-12hr    256 embryo 12-14hr    420 embryo 14-16hr    521 embryo 16-18hr    503 embryo 18-20hr    444 embryo 20-22hr    484 embryo 22-24hr    454 larva L1    203 larva L2    158 larva L3 12hr old    156 larva L3 puffstage 1-2    110 larva L3 puffstage 3-6    253 larva L3 puffstage 7-9    275 white prepupae new    289 white prepupae 12hr    298 white prepupae 24hr    413 pupae 2d postWPP    354 pupae 3d postWPP    279 pupae 4d postWPP    270 adult male 01day    441 adult male 05day    570 adult male 30day    524 adult female 01day    368 adult female 05day    509 adult female 30day    545 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    750 embryo 02-04hr    710 embryo 04-06hr    285 embryo 06-08hr    293 embryo 08-10hr    401 embryo 10-12hr    256 embryo 12-14hr    420 embryo 14-16hr    521 embryo 16-18hr    503 embryo 18-20hr    444 embryo 20-22hr    484 embryo 22-24hr    454 larva L1    203 larva L2    158 larva L3 12hr old    156 larva L3 puffstage 1-2    110 larva L3 puffstage 3-6    253 larva L3 puffstage 7-9    275 white prepupae new    289 white prepupae 12hr    298 white prepupae 24hr    413 pupae 2d postWPP    354 pupae 3d postWPP    279 pupae 4d postWPP    270 adult male 01day    441 adult male 05day    570 adult male 30day    524 adult female 01day    368 adult female 05day    509 adult female 30day    545 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0259234    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0259234 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at moderate levels in the following post-embryonic organs or tissues: adult ovary. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Heatmap Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut     Larval Hindgut     Larval Malpighian Tubules no informative data Larval Fat Body     Larval Salivary Gland     Larval Trachea no informative data Larval Carcass     Adult Head     Adult Eye no informative data Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut     Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary no informative data Adult Testis no informative data Adult Male Accessory Gland     Adult Carcass     modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_27
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0259234 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG13953-RA;CG13952-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | pupal stage, with Scer\GAL4pnr-MD237 CamtaGD14755 viable Camtaf05489 viable, with Scer\GAL4pnr-MD237 CamtaGD14756 Sterility Allele fertile Camtaf05489 Other Phenotypes Allele neurophysiology defective Camtates-1 Camtates-2 visible, with Scer\GAL4pnr-MD237 CamtaGD14756 Phenotype manifest in Allele eye photoreceptor cell Camtates-1 Camtates-2 trichogen cell, with Scer\GAL4pnr-MD237 CamtaGD14756 trichogen cell | supernumerary, with Scer\GAL4pnr-MD237 CamtaGD14756
Classical Alleles ( 9 )
For All Classical Alleles Show
Allele of Camta Class Mutagen Stocks Known lesion Camtaf05489 piggyBac transposase 2 -- Camtac02886 1 -- CamtaDG19711 1 -- Camtaf02144 1 -- CamtaMB05101 1 -- CamtaMI01580 1 -- Camtaf07692 0 -- Camtates-1 ethyl methanesulfonate 0 Yes Camtates-2 ethyl methanesulfonate 0 Yes
Alleles Carried on Transgenic Constructs ( 16 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Camta Class Mutagen Stocks Known lesion CamtaGD14756 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CamtaGD14755 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CamtaGD5281 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CamtaGLV21048 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CamtaJF02407 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CamtaKK102178 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CamtaKK106994 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CamtaKK112864 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Camtahs.PH in vitro construct - regulatory fusion 0 Yes Camtam2Q1.hs in vitro construct - regulatory fusion in vitro construct - site directed mutagenesis in vitro construct - amino acid replacement 0 Yes Camtam2Q1.trp in vitro construct - regulatory fusion in vitro construct - site directed mutagenesis in vitro construct - amino acid replacement 0 Yes Camtam3Q1.hs in vitro construct - regulatory fusion in vitro construct - site directed mutagenesis in vitro construct - amino acid replacement 0 Yes Camtam3Q1.trp in vitro construct - regulatory fusion in vitro construct - site directed mutagenesis in vitro construct - amino acid replacement 0 Yes CamtamlQ1.hs in vitro construct - regulatory fusion in vitro construct - site directed mutagenesis in vitro construct - amino acid replacement 0 Yes CamtamlQ1.trp in vitro construct - regulatory fusion in vitro construct - site directed mutagenesis in vitro construct - amino acid replacement 0 Yes Camtatrp.PH in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(2R)w45-19g (Han et al., 2006)
Not disrupted in	Df(2R)w73-1 (Han et al., 2006)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data heat-shock construct P{hs-Camta.H} NA P{hs-Camta.m2Q1} NA P{hs-Camta.m3Q1} NA P{hs-Camta.mlQ1} NA UAS construct P{GD14756} NA P{KK102178} NA P{KK106994} NA P{KK112864} NA P{TRiP.GLV21048} NA P{TRiP.JF02407} NA characterization construct P{trp-Camta.H} NA P{trp-Camta.m2Q1} NA P{trp-Camta.m3Q1} NA P{trp-Camta.mlQ1} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions Mi{MIC}CamtaMI01580 NA P{wHy}CamtaDG19711 NA PBac{PB}Camtac02886 NA PBac{WH}Camtaf02144 NA PBac{WH}Camtaf05489 NA PBac{WH}Camtaf07692 NA insertion of enhancer trap binary system Mi{ET1}CamtaMB05101 No
Gene Ontology: Function, Process & Cellular Component ( 10 unique terms )
Terms Based on Experimental Evidence ( 6 terms )
Molecular Function
CV term Evidence References
protein homodimerization activity inferred from physical interaction with Camta (Gong et al., 2007) RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription inferred from direct assay (Gong et al., 2007)
Biological Process
CV term Evidence References
deactivation of rhodopsin mediated signaling inferred from mutant phenotype (Han et al., 2006) positive regulation of transcription from RNA polymerase II promoter inferred from direct assay (Gong et al., 2007) response to light stimulus inferred from mutant phenotype (Gong et al., 2007)
Cellular Component
CV term Evidence References
nucleus inferred from direct assay (Han et al., 2006, Gong et al., 2007)
Terms Based on Predictions or Assertions ( 5 terms )
Molecular Function
CV term Evidence References
calmodulin binding inferred from sequence or structural similarity (Bouche et al., 2002) DNA binding inferred from electronic annotation with InterPro:IPR005559 (FlyBase Curators et al., 2004-) inferred from sequence or structural similarity (Bouche et al., 2002) sequence-specific DNA binding transcription factor activity inferred from sequence or structural similarity (Bouche et al., 2002)
Biological Process
CV term Evidence References
positive regulation of transcription, DNA-dependent inferred from sequence or structural similarity (Bouche et al., 2002)
Cellular Component
CV term Evidence References
nucleus inferred from sequence or structural similarity (Bouche et al., 2002)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Camta allele Gene References unspecified Arr2 (Han et al., 2006) Fbxl4 (Han et al., 2006) Gα49B (Han et al., 2006) ninaE (Han et al., 2006)
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 61805 DroID - A comprehensive database of gene and protein interactions. • FBgn0259234
Orthologs
Genome-wide drosophilid orthologs	Dana\GF12465 Dana\GF12466 Dana\GF12467 Dere\GG24074 Dere\GG24075 Dere\GG24076 Dgri\GH19920 Dgri\GH19921 Dgri\GH19924 Dmoj\GI19877 Dmoj\GI19878 Dmoj\GI19881 Dper\GL17353 Dper\GL17354 Dpse\GA12651 Dpse\GA24224 Dpse\GA24225 Dsec\GM21123 Dsec\GM21124 Dsim\GD10656 Dsim\GD10657 Dsim\GD10658 Dvir\GJ15048 Dvir\GJ15049 Dvir\GJ15050 Dwil\GK15748 Dwil\GK15750 Dwil\GK15751 Dyak\GE19278 Dyak\GE19279 Dyak\GE19280
Curated drosophilid orthologs	Dpse\GA12651
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL003097-PA Aedes aegypti (mosquito) AGAP007133-PA Anopheles gambiae (mosquito) XP_001120489.1 Apis mellifera (honey bee) At2g22300.1 Arabidopsis thaliana (wall cress) 80786 Branchiostoma floridae (lancelet) BGIBMGA014124-PA Bombyx mori (silk worm) ENSBTAP00000011330 Bos taurus (bovine) CN22078 Caenorhabditis brenneri (small nematode) CBP27698 Caenorhabditis briggsae (nematode) CE33443 Caenorhabditis elegans (worm) ENSCAFP00000023054 Canis familiaris (dog) JA15220 Caenorhabditis japonica (nematode) CPIJ003688 Culex pipens (mosquito) ENSCPOP00000006597 Cavia porcellus (guinea pig) ENSCSAVP00000003906 Ciona savignyi (sedentary tunicate) ENSECAP00000017139 Equus caballus (horse) ENSGACP00000010494 Gymnopilus aculeatus (mushroom) ENSGALP00000000860 Gallus gallus (chicken) ENSP00000366788 Homo sapiens (human) ENSMODP00000006433 Monodelphis domestica (gray opossum) ENSMMUP00000035362 Macaca mulatta (rhesus monkey) ENSMUSP00000054804 Mus musculus (house mouse) ENSOANP00000006397 Ornithorynchus anatinus (platypus) ENSORLP00000020456 Oryzias latipes (japanese killifish) LOC_Os10g22950.1 Oryza sativa (asian rice) ENSPPYP00000002241 Pongo pygmaeus (orangutan) 226066 Populus trichocarpa (black cottonwood) ENSPTRP00000000189 Pan troglodytes (chimpanzee) ENSRNOP00000053461 Rattus norvegicus (norway rat) 5050036 Sorghum bicolor (sorghum) XP_001193423.1 Strongylocentrotus purpuratus (purple sea urchin) XP_968552.2 Tribolium castaneum (red flour beetle) ENSTNIP00000015515 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000027631 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000037849 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB18602 NV50190 LH11118 ISCW018640 FBgn0236632 FBgn0217753 FBgn0202249 FBgn0182425 FBgn0176007 FBgn0176006 JGI_V11_312030 FBgn0245624 FBgn0154957 FBgn0142618 FBgn0127385 FBgn0116215 FBgn0089504 CPIJ003688 CPIJ003462 CPIJ019767 CPIJ019634 CPIJ018352 BGIBMGA014124 ACYPI47146 GB13816 AGAP007133 AAEL003097 PHUM466620 GLEAN_12002 GLEAN_12001
Stocks & Reagents
Stocks Listed in FlyBase ( 16 )
Bloomington	18874 w1118; PBac{WH}Camtaf05489 24606 w1118; Mi{ET1}CamtaMB05101
Harvard	- PBac{PB}Camtac02886 - PBac{WH}Camtaf02144 - PBac{WH}Camtaf05489
VDRC	v106025 P{KK112864}VIE-260B v107270 P{KK102178}VIE-260B v107376 P{KK106994}VIE-260B v39077 w1118 P{GD14756}v39077 v51354 w1118; P{GD5281}v51354 v36484 w1118; P{GD14755}v36484 v39076 w1118; P{GD14756}v39076
	More stocks available...
Genomic Clones ( 1 )
	BACR14J24 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 25 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD15680
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	RE02776 RE43217
Other clones	108342 214475.42 AT07463 EK052704 EK288405 EP19750 FGM208G06 IP17075 IP17175 RP004186398 RP004194561 RP004256389 RP004360407 RP004365914 RP004379970 RP004389428 RP004408607 RP004459689 RP004479017 RP004508901 RP004529201 RP004538691
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0259234 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 35972 35973 35974
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Camta CG8809 (Bouche, 2002.4.2)
Source for database merge of	Source for merge of: Camta CG13952 CG13953 (FlyBase Genome Annotators, 2008)
Additional comments	Annotations CG8809, CG13952 and CG13953 merged as CG42332 in release 5.9 of the genome annotation. (FlyBase Genome Annotators, 2008)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_136647 NM_001144152 NM_001144153 NM_001144154 NM_001169627 RefSeq (Proteins) • NP_610491 NP_001137624 NP_001137625 NP_001137626 NP_001163098 DDBJ / EMBL / GenBank • AA440801 AAF58934 AAL28756 ABI94369 ACL83078 ACL83079 ACL83080 ACZ94376 AW942374 AY061208 CZ488077 DQ902587 Entrez Gene - A searchable database of RefSeq genes. • 35974 UniProtKB/TrEMBL • A0SQK5 A1Z7V0 B7YZS4 B7YZU4 B7YZU5 E1JH18 Q95RQ6
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • IQ motif, EF-hand binding site (IPR000048) Ankyrin repeat (IPR002110) CG-1 (IPR005559) Immunoglobulin E-set (IPR014756) Ankyrin repeat-containing domain (IPR020683)
Linkouts
	BioGRID - A database of protein and genetic interactions • 61805 DroID - A comprehensive database of gene and protein interactions. • FBgn0259234 DRSC - Results from RNAi screens. • FBgn0259234 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0259234 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG13953-RA;CG13952-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0259234 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 35972 35973 35974 InParanoid A subset of ortholog calls from InParanoid. • AAEL003097-PA Aedes aegypti (mosquito) AGAP007133-PA Anopheles gambiae (mosquito) XP_001120489.1 Apis mellifera (honey bee) At2g22300.1 Arabidopsis thaliana (wall cress) 80786 Branchiostoma floridae (lancelet) BGIBMGA014124-PA Bombyx mori (silk worm) ENSBTAP00000011330 Bos taurus (bovine) CN22078 Caenorhabditis brenneri (small nematode) CBP27698 Caenorhabditis briggsae (nematode) CE33443 Caenorhabditis elegans (worm) ENSCAFP00000023054 Canis familiaris (dog) JA15220 Caenorhabditis japonica (nematode) CPIJ003688 Culex pipens (mosquito) ENSCPOP00000006597 Cavia porcellus (guinea pig) ENSCSAVP00000003906 Ciona savignyi (sedentary tunicate) ENSECAP00000017139 Equus caballus (horse) ENSGACP00000010494 Gymnopilus aculeatus (mushroom) ENSGALP00000000860 Gallus gallus (chicken) ENSP00000366788 Homo sapiens (human) ENSMODP00000006433 Monodelphis domestica (gray opossum) ENSMMUP00000035362 Macaca mulatta (rhesus monkey) ENSMUSP00000054804 Mus musculus (house mouse) ENSOANP00000006397 Ornithorynchus anatinus (platypus) ENSORLP00000020456 Oryzias latipes (japanese killifish) LOC_Os10g22950.1 Oryza sativa (asian rice) ENSPPYP00000002241 Pongo pygmaeus (orangutan) 226066 Populus trichocarpa (black cottonwood) ENSPTRP00000000189 Pan troglodytes (chimpanzee) ENSRNOP00000053461 Rattus norvegicus (norway rat) 5050036 Sorghum bicolor (sorghum) XP_001193423.1 Strongylocentrotus purpuratus (purple sea urchin) XP_968552.2 Tribolium castaneum (red flour beetle) ENSTNIP00000015515 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000027631 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000037849 Xenopus tropicalis (frog) modMine - Data generated by the modENCODE project. • FBgn0259234 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB18602 NV50190 LH11118 ISCW018640 FBgn0236632 FBgn0217753 FBgn0202249 FBgn0182425 FBgn0176007 FBgn0176006 JGI_V11_312030 FBgn0245624 FBgn0154957 FBgn0142618 FBgn0127385 FBgn0116215 FBgn0089504 CPIJ003688 CPIJ003462 CPIJ019767 CPIJ019634 CPIJ018352 BGIBMGA014124 ACYPI47146 GB13816 AGAP007133 AAEL003097 PHUM466620 GLEAN_12002 GLEAN_12001
Synonyms & Secondary IDs ( 10 )
Reported As
Symbol Synonym	camta (Greil et al., 2003) Camta   CG8809 (Bouche, 2002.4.2, Keleman et al., 2009.8.5) CG13952 (Han et al., 2006, Markstein et al., 2008, Keleman et al., 2009.8.5) CG13953 (Han et al., 2006, Keleman et al., 2009.8.5) CG42332 (FlyBase Genome Annotators, 2008, Perkins et al., 2009.3.31, Ni et al., 2011.7.19) dCAMTA (Han et al., 2006, Gong et al., 2007, Han et al., 2007) DmCAMTA (Bouche et al., 2002, Bouche, 2002.4.2)
Name Synonym	Calmodulin-binding transcription activator (Bouche et al., 2002, Bouche, 2002.4.2) calmodulin-binding transcription activator (Han et al., 2006) CG13952   CG13953   CG42332 (FlyBase Genome Annotators, 2008)
Secondary FlyBase IDs
	FBgn0033415 FBgn0033416 FBgn0033417
References ( 25 )
Generate a list of	All references relating to this gene ( 25 )
List References by type	Research paper  ( 6 ) Supplementary material  ( 2 ) Personal communication to FlyBase  ( 10 ) FlyBase analysis  ( 3 ) Computer file  ( 3 ) Automatic genome annotation  ( 1 )
Recent research papers (0)
	All research papers listed in FlyBase were published before 2010 Show research papers ...