A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\brp

General Information
SymbolDmel\brpSpeciesD. melanogaster
NamebruchpilotAnnotation symbolCG42344
Feature typeprotein_coding_geneFlyBase IDFBgn0259246
Gene Model StatusCurrent Stock availability 21 publicly available
Also Known Asnc82, CG30337, CG34146, mAb nc82, MAbnc82, CG12932, nc-82
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map45E3-45F1Sequence location2R:5,391,270..5,428,822 [+]

Genomic Maps

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Automatically generated summary

See sections below for more information
The gene bruchpilot is referred to in FlyBase by the symbol Dmel\brp (CG42344, FBgn0259246). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: calcium channel activity. There is experimental evidence that it is involved in the biological process: synaptic transmission; neuromuscular synaptic transmission; regulation of synaptic plasticity; neurotransmitter secretion; adult locomotory behavior; cytoskeletal matrix organization at active zone; maintenance of presynaptic active zone structure; short-term memory; anesthesia-resistant memory. 36 alleles are reported. The phenotypes of these alleles are annotated with: t-bar; neuromuscular junction; embryonic/larval neuromuscular junction; mesothoracic tergum; synapse; synaptic vesicle. It has 9 annotated transcripts and 9 annotated polypeptides. Protein features are: CAZ complex, RIM-binding protein. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, during late pupal stages. Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at moderate levels in the following post-embryonic organs or tissues: adult brain. Gene sequence location is 2R:5391270..5428822.

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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
45E3-45F1  
Limits computationally determined from genome sequence between P{lacW}wunk09507&P{lacW}l(2)k12402k12402 and P{EP}EP2165&P{lacW}l(2)k01301k01301  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
45E4-45E4  
Limits computationally determined from genome sequence between P{lacW}wunk09507&P{lacW}l(2)k12402k12402 and P{EP}EP2165&P{lacW}l(2)k01301k01301;  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\brp for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0339383 FBtr0088512 FBtr0305062 FBtr0336693 FBtr0305060 FBtr0300245 FBtr0299915 FBtr0305061 FBtr0299916 FBtr0300542 FBtr0305059 FBtr0310032 FBpp0087596 FBpp0308474 FBpp0293597 FBpp0293598 FBpp0293599 FBpp0289478 FBpp0289194 FBpp0307674 FBpp0289769 FBpp0289193 FBpp0293596 FBti0067338 FBti0029542 FBti0056959 FBti0023439 FBti0050444 FBti0053945 FBti0115867 FBti0145362 FBti0044871 FBti0036416 FBti0109268 FBti0033674 FBti0023120 FBti0152119
Comments on Gene Model
Gene model reviewed during 5.42
Low-frequency RNA-Seq exon junction(s) not annotated.
Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.
Gene model reviewed during 5.48
Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0299915
  9679
  1740
FBtr0299916
  6072
  1740
FBtr0300245
  9435
  1786
FBtr0300542
  5562
  1740
FBtr0305059
  5590
  1397
FBtr0305060
  11661
  2238
FBtr0305061
  6226
  1707
FBtr0305062
  6448
  1781
FBtr0336693
  9188
  1498
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
brp-PD  
FBpp0289193  
201.7  
1740  
6.13  
brp-PE  
FBpp0289194  
201.7  
1740  
6.13  
brp-PG  
FBpp0289478  
206.7  
1786  
6.25  
brp-PH  
FBpp0289769  
201.7  
1740  
6.13  
brp-PI  
FBpp0293596  
161.7  
1397  
5.80  
brp-PJ  
FBpp0293597  
255.3  
2238  
6.90  
brp-PK  
FBpp0293598  
197.4  
1707  
6.27  
brp-PL  
FBpp0293599  
206.2  
1781  
6.24  
brp-PM  
FBpp0307674  
173.5  
1498  
6.21  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
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Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
In lamina cross section, expression of brp is largely restricted to the ring of R1-R6 terminals within the photoreceptor cartridge, and shows a punctate distribution. Using immunoelectron microscopy, immunosignals are localized to regions of the T-bar ribbon in photoreceptor tetrads, specifically at the edge of the ribbon's platform. It is also expressed in the neuropils of the central brain.
brp protein is expressed in larva and adults as discrete puncta in the presynatic active zone of the mushroom body alpha/beta, alpha'/beta' and gamma neurons and calyx.
brp protein labels the presynaptic terminals in the medulla and lamina. Co-expression of brp and Scer\GAL4cry.PE labelled cell projections was observed in the medulla, corresponding to DN3 neurons, but not in the lamina.
brp protein is expressed in the presynaptic active zone. In the larval neuromuscular junction, it defines the core of the active zone, being surrounded by clusters of Liprin-α and RhoGAP100F.
nc82 is used as a generic marker for neuropil structures.
brp localizes opposite to clusters of glutamate receptors in the neuromuscular junction of late-stage embryos.
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
inferred from direct assay
colocalizes_with
presynaptic membrane
inferred from direct assay
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)


   Styles
   Scales

Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at moderate levels in the following post-embryonic organs or tissues: adult brain.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (>999.999)

Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 69
central nervous system, pupae P8
 
 204
head, virgin 1-day female
 
 70
head, virgin 4-day female
 
 59
head, virgin 20-day female
 
 24
head, mated 1-day female
 
 65
head, mated 4-day female
 
 54
head, mated 20-day female
 
 25
head, mated 1-day male
 
 110
head, mated 4-day male
 
 98
head, mated 20-day male
 
 71
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 1
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 3
fat body, pupae P8
 
 16
carcass, larvae L3 wandering
 
 9
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 7
carcass, 20-day adult
 
 4
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 2
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 (69)
central nervous system, pupae P8
 (204)
head, virgin 1-day female
 (70)
head, virgin 4-day female
 (59)
head, virgin 20-day female
 
 24
head, mated 1-day female
 (65)
head, mated 4-day female
 (54)
head, mated 20-day female
 
 25
head, mated 1-day male
 (110)
head, mated 4-day male
 (98)
head, mated 20-day male
 (71)
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 1
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 3
fat body, pupae P8
 
 16
carcass, larvae L3 wandering
 
 9
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 7
carcass, 20-day adult
 
 4
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 2
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 69
central nervous system, pupae P8
 (204)
head, virgin 1-day female
 
 70
head, virgin 4-day female
 
 59
head, virgin 20-day female
 
 24
head, mated 1-day female
 
 65
head, mated 4-day female
 
 54
head, mated 20-day female
 
 25
head, mated 1-day male
 (110)
head, mated 4-day male
 
 98
head, mated 20-day male
 
 71
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 1
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 3
fat body, pupae P8
 
 16
carcass, larvae L3 wandering
 
 9
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 7
carcass, 20-day adult
 
 4
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 2
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 69
central nervous system, pupae P8
 
 204
head, virgin 1-day female
 
 70
head, virgin 4-day female
 
 59
head, virgin 20-day female
 
 24
head, mated 1-day female
 
 65
head, mated 4-day female
 
 54
head, mated 20-day female
 
 25
head, mated 1-day male
 
 110
head, mated 4-day male
 
 98
head, mated 20-day male
 
 71
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 1
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 3
fat body, pupae P8
 
 16
carcass, larvae L3 wandering
 
 9
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 7
carcass, 20-day adult
 
 4
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 2
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 69
central nervous system, pupae P8
 
 204
head, virgin 1-day female
 
 70
head, virgin 4-day female
 
 59
head, virgin 20-day female
 
 24
head, mated 1-day female
 
 65
head, mated 4-day female
 
 54
head, mated 20-day female
 
 25
head, mated 1-day male
 
 110
head, mated 4-day male
 
 98
head, mated 20-day male
 
 71
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 1
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 3
fat body, pupae P8
 
 16
carcass, larvae L3 wandering
 
 9
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 7
carcass, 20-day adult
 
 4
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 2
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 (69)
central nervous system, pupae P8
 (204)
head, virgin 1-day female
 (70)
head, virgin 4-day female
 (59)
head, virgin 20-day female
 
 24
head, mated 1-day female
 (65)
head, mated 4-day female
 (54)
head, mated 20-day female
 
 25
head, mated 1-day male
 (110)
head, mated 4-day male
 (98)
head, mated 20-day male
 (71)
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 1
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 3
fat body, pupae P8
 
 16
carcass, larvae L3 wandering
 
 9
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 7
carcass, 20-day adult
 
 4
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 2
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 69
central nervous system, pupae P8
 (204)
head, virgin 1-day female
 
 70
head, virgin 4-day female
 
 59
head, virgin 20-day female
 
 24
head, mated 1-day female
 
 65
head, mated 4-day female
 
 54
head, mated 20-day female
 
 25
head, mated 1-day male
 110
head, mated 4-day male
 
 98
head, mated 20-day male
 
 71
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 1
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 3
fat body, pupae P8
 
 16
carcass, larvae L3 wandering
 
 9
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 7
carcass, 20-day adult
 
 4
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 2
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 69
central nervous system, pupae P8
 
 204
head, virgin 1-day female
 
 70
head, virgin 4-day female
 
 59
head, virgin 20-day female
 
 24
head, mated 1-day female
 
 65
head, mated 4-day female
 
 54
head, mated 20-day female
 
 25
head, mated 1-day male
 
 110
head, mated 4-day male
 
 98
head, mated 20-day male
 
 71
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 1
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 3
fat body, pupae P8
 
 16
carcass, larvae L3 wandering
 
 9
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 7
carcass, 20-day adult
 
 4
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 2
accessory gland, mated 4-day male
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, during late pupal stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 1
embryo 12-14hr
 
 4
embryo 14-16hr
 
 13
embryo 16-18hr
 
 21
embryo 18-20hr
 
 26
embryo 20-22hr
 
 20
embryo 22-24hr
 
 22
larva L1
 
 19
larva L2
 
 7
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 3
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 4
white prepupae 12hr
 
 10
white prepupae 24hr
 
 15
pupae 2d postWPP
 
 23
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 7
adult male 01day
 
 10
adult male 05day
 
 10
adult male 30day
 
 8
adult female 01day
 
 4
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 1
embryo 12-14hr
 
 4
embryo 14-16hr
 
 13
embryo 16-18hr
 
 21
embryo 18-20hr
 26
embryo 20-22hr
 
 20
embryo 22-24hr
 
 22
larva L1
 
 19
larva L2
 
 7
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 3
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 4
white prepupae 12hr
 
 10
white prepupae 24hr
 
 15
pupae 2d postWPP
 
 23
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 7
adult male 01day
 
 10
adult male 05day
 
 10
adult male 30day
 
 8
adult female 01day
 
 4
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 1
embryo 12-14hr
 
 4
embryo 14-16hr
 
 13
embryo 16-18hr
 
 21
embryo 18-20hr
 
 26
embryo 20-22hr
 
 20
embryo 22-24hr
 
 22
larva L1
 
 19
larva L2
 
 7
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 3
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 4
white prepupae 12hr
 
 10
white prepupae 24hr
 
 15
pupae 2d postWPP
 
 23
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 7
adult male 01day
 
 10
adult male 05day
 
 10
adult male 30day
 
 8
adult female 01day
 
 4
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 1
embryo 12-14hr
 
 4
embryo 14-16hr
 
 13
embryo 16-18hr
 
 21
embryo 18-20hr
 
 26
embryo 20-22hr
 
 20
embryo 22-24hr
 
 22
larva L1
 
 19
larva L2
 
 7
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 3
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 4
white prepupae 12hr
 
 10
white prepupae 24hr
 
 15
pupae 2d postWPP
 
 23
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 7
adult male 01day
 
 10
adult male 05day
 
 10
adult male 30day
 
 8
adult female 01day
 
 4
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 1
embryo 12-14hr
 
 4
embryo 14-16hr
 
 13
embryo 16-18hr
 
 21
embryo 18-20hr
 
 26
embryo 20-22hr
 
 20
embryo 22-24hr
 
 22
larva L1
 
 19
larva L2
 
 7
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 3
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 4
white prepupae 12hr
 
 10
white prepupae 24hr
 
 15
pupae 2d postWPP
 
 23
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 7
adult male 01day
 
 10
adult male 05day
 
 10
adult male 30day
 
 8
adult female 01day
 
 4
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 1
embryo 12-14hr
 
 4
embryo 14-16hr
 
 13
embryo 16-18hr
 
 21
embryo 18-20hr
 26
embryo 20-22hr
 
 20
embryo 22-24hr
 
 22
larva L1
 
 19
larva L2
 
 7
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 3
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 4
white prepupae 12hr
 
 10
white prepupae 24hr
 
 15
pupae 2d postWPP
 
 23
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 7
adult male 01day
 
 10
adult male 05day
 
 10
adult male 30day
 
 8
adult female 01day
 
 4
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 1
embryo 12-14hr
 
 4
embryo 14-16hr
 
 13
embryo 16-18hr
 
 21
embryo 18-20hr
 
 26
embryo 20-22hr
 
 20
embryo 22-24hr
 
 22
larva L1
 
 19
larva L2
 
 7
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 3
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 4
white prepupae 12hr
 
 10
white prepupae 24hr
 
 15
pupae 2d postWPP
 
 23
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 7
adult male 01day
 
 10
adult male 05day
 
 10
adult male 30day
 
 8
adult female 01day
 
 4
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 1
embryo 12-14hr
 
 4
embryo 14-16hr
 
 13
embryo 16-18hr
 
 21
embryo 18-20hr
 
 26
embryo 20-22hr
 
 20
embryo 22-24hr
 
 22
larva L1
 
 19
larva L2
 
 7
larva L3 12hr old
 
 2
larva L3 puffstage 1-2
 
 1
larva L3 puffstage 3-6
 
 3
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 4
white prepupae 12hr
 
 10
white prepupae 24hr
 
 15
pupae 2d postWPP
 
 23
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 7
adult male 01day
 
 10
adult male 05day
 
 10
adult male 30day
 
 8
adult female 01day
 
 4
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 2
embryonic S1
 
 0
embryonic S3
 
 7
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 2
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 9
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 1
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 1
ovary fGS/OSS
 
 1
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 2
embryonic S1
 
 0
embryonic S3
 
 7
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 2
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 9
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 1
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 1
ovary fGS/OSS
 
 1
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 2
embryonic S1
 
 0
embryonic S3
 
 7
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 2
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 9
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 1
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 1
ovary fGS/OSS
 
 1
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 2
embryonic S1
 
 0
embryonic S3
 
 7
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 2
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 9
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 1
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 1
ovary fGS/OSS
 
 1
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 2
embryonic S1
 
 0
embryonic S3
 
 7
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 2
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 9
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 1
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 1
ovary fGS/OSS
 
 1
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 2
embryonic S1
 
 0
embryonic S3
 
 7
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 2
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 9
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 1
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 1
ovary fGS/OSS
 
 1
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 2
embryonic S1
 
 0
embryonic S3
 
 7
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 2
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 9
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 1
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 1
ovary fGS/OSS
 
 1
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 2
embryonic S1
 
 0
embryonic S3
 
 7
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 2
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 1
antennal disc ML-DmD20-c5
 
 9
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 1
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 1
ovary fGS/OSS
 
 1
ovary OSC
 
 0
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 16
heat shock, 4-day adult
 
 3
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 8
Copper 0.5 mM 12 hrs, larvae L3
 
 2
Copper 15 mM 48 hrs, 4-day adult
 
 16
Zinc 5 mM 12 hrs, larvae L3
 
 4
Zinc 4.5 mM 48 hrs, 4-day adult
 
 19
Ethanol 2.5% 3 hrs, larvae L3
 
 5
Ethanol 5% 3 hrs, larvae L3
 
 1
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 5
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 13
Paraquat 5 mM 48 hrs, 4-day adult
 
 8
Paraquat 10 mM 48 hrs, 4-day adult
 
 10
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 16
heat shock, 4-day adult
 
 3
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 8
Copper 0.5 mM 12 hrs, larvae L3
 
 2
Copper 15 mM 48 hrs, 4-day adult
 
 16
Zinc 5 mM 12 hrs, larvae L3
 
 4
Zinc 4.5 mM 48 hrs, 4-day adult
 
 19
Ethanol 2.5% 3 hrs, larvae L3
 
 5
Ethanol 5% 3 hrs, larvae L3
 
 1
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 5
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 13
Paraquat 5 mM 48 hrs, 4-day adult
 
 8
Paraquat 10 mM 48 hrs, 4-day adult
 
 10
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 16
heat shock, 4-day adult
 
 3
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 8
Copper 0.5 mM 12 hrs, larvae L3
 
 2
Copper 15 mM 48 hrs, 4-day adult
 
 16
Zinc 5 mM 12 hrs, larvae L3
 
 4
Zinc 4.5 mM 48 hrs, 4-day adult
 
 19
Ethanol 2.5% 3 hrs, larvae L3
 
 5
Ethanol 5% 3 hrs, larvae L3
 
 1
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 5
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 13
Paraquat 5 mM 48 hrs, 4-day adult
 
 8
Paraquat 10 mM 48 hrs, 4-day adult
 
 10
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 16
heat shock, 4-day adult
 
 3
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 8
Copper 0.5 mM 12 hrs, larvae L3
 
 2
Copper 15 mM 48 hrs, 4-day adult
 
 16
Zinc 5 mM 12 hrs, larvae L3
 
 4
Zinc 4.5 mM 48 hrs, 4-day adult
 
 19
Ethanol 2.5% 3 hrs, larvae L3
 
 5
Ethanol 5% 3 hrs, larvae L3
 
 1
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 5
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 13
Paraquat 5 mM 48 hrs, 4-day adult
 
 8
Paraquat 10 mM 48 hrs, 4-day adult
 
 10
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 16
heat shock, 4-day adult
 
 3
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 8
Copper 0.5 mM 12 hrs, larvae L3
 
 2
Copper 15 mM 48 hrs, 4-day adult
 
 16
Zinc 5 mM 12 hrs, larvae L3
 
 4
Zinc 4.5 mM 48 hrs, 4-day adult
 
 19
Ethanol 2.5% 3 hrs, larvae L3
 
 5
Ethanol 5% 3 hrs, larvae L3
 
 1
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 5
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 13
Paraquat 5 mM 48 hrs, 4-day adult
 
 8
Paraquat 10 mM 48 hrs, 4-day adult
 
 10
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 16
heat shock, 4-day adult
 
 3
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 8
Copper 0.5 mM 12 hrs, larvae L3
 
 2
Copper 15 mM 48 hrs, 4-day adult
 
 16
Zinc 5 mM 12 hrs, larvae L3
 
 4
Zinc 4.5 mM 48 hrs, 4-day adult
 
 19
Ethanol 2.5% 3 hrs, larvae L3
 
 5
Ethanol 5% 3 hrs, larvae L3
 
 1
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 5
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 13
Paraquat 5 mM 48 hrs, 4-day adult
 
 8
Paraquat 10 mM 48 hrs, 4-day adult
 
 10
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 16
heat shock, 4-day adult
 
 3
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 8
Copper 0.5 mM 12 hrs, larvae L3
 
 2
Copper 15 mM 48 hrs, 4-day adult
 
 16
Zinc 5 mM 12 hrs, larvae L3
 
 4
Zinc 4.5 mM 48 hrs, 4-day adult
 
 19
Ethanol 2.5% 3 hrs, larvae L3
 
 5
Ethanol 5% 3 hrs, larvae L3
 
 1
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 5
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 13
Paraquat 5 mM 48 hrs, 4-day adult
 
 8
Paraquat 10 mM 48 hrs, 4-day adult
 
 10
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 16
cold shock, 4-day adult
 
 16
heat shock, 4-day adult
 
 3
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 8
Copper 0.5 mM 12 hrs, larvae L3
 
 2
Copper 15 mM 48 hrs, 4-day adult
 
 16
Zinc 5 mM 12 hrs, larvae L3
 
 4
Zinc 4.5 mM 48 hrs, 4-day adult
 
 19
Ethanol 2.5% 3 hrs, larvae L3
 
 5
Ethanol 5% 3 hrs, larvae L3
 
 1
Ethanol 10% 3 hrs, larvae L3
 
 1
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 5
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 13
Paraquat 5 mM 48 hrs, 4-day adult
 
 8
Paraquat 10 mM 48 hrs, 4-day adult
 
 10
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 14 )
For All Classical Alleles Show

Allele of brpClassMutagenStocksKnown lesion
brp5-HA-1511
1 --
brpc04298
1 --
brpd00208
1 --
brpd09839
1 --
brpf01241b
1 --
brpf02174
1 --
brpKG04653b
1 --
brpMB09517
1 --
brpMI02987
1 --
brp1.30 Yes
brp5.450 Yes
brp690 Yes
brpnude
0 Yes
brpScer\UAS.T:Disc\RFP-mRFP
0 --
hide Alleles Carried on Transgenic Constructs ( 22 )
For All Alleles Carried on Transgenic Constructs Show

Allele of brpClassMutagenStocksKnown lesion
brpScer\UAS.T:Avic\GFP3 Yes
brpGD78742 Yes
brpGD100451 Yes
brpGD100461 Yes
brpJF019321 Yes
brpKK1086771 Yes
brpKK1095771 Yes
brpKK1097011 Yes
brpKK1114551 Yes
brpD1-3.Scer\UAS.T:Avic\GFP-EGFP0 Yes
brpD1-4.Scer\UAS.T:Avic\GFP-EGFP0 Yes
brpD2-4.Scer\UAS.T:Avic\GFP-EGFP0 Yes
brpdsRNA.B.Scer\UAS0 Yes
brpdsRNA.C.Scer\UAS0 Yes
brpGD78750 Yes
brpNIG.12933R0 Yes
brpS.mb247.T:Avic\GFP0 Yes
brpS.Scer\UAS.T:Avic\GFP-CFP0 Yes
brpS.Scer\UAS.T:Avic\GFP-EGFP0 Yes
brpS.Scer\UAS.T:Disc\RFP-mCherry0 Yes
brpS.Scer\UAS.T:Disc\RFP-mStraw0 Yes
brpScer\UAS.cWa0 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
characterization construct
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 14 unique terms )
hide Terms Based on Experimental Evidence ( 14 terms )
Molecular Function
CV term
References
inferred from mutant phenotype
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from direct assay
inferred from direct assay
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay
colocalizes_with
presynaptic membrane
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 0 terms )
hide Sequence Ontology: Class of Gene
 
hide Interactions & Pathways
hide Summary of Physical Interactions
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
brp allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
hide OrthoDB Orthologs (31) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
hideOrthologs in Drosophila Species (EOG63N7Z7, EOG6PZJST, EOG6T1J6S)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila sechellia
 
 
 
Drosophila erecta
 
 
 
Drosophila yakuba
 
 
 
Drosophila ananassae
 
 
 
Drosophila pseudoobscura pseudoobscura
 
Y
 
Drosophila persimilis
 
 
 
Drosophila willistoni
 
 
 
Drosophila virilis
 
 
 
Drosophila mojavensis
 
 
 
Drosophila grimshawi
 
 
 
hideOrthologs in non-Drosophila Dipterans (EOG6TTGS1, EOG6BK5CS, EOG6XSKZS)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Aedes aegypti
Yellow fever mosquito 
 
Anopheles gambiae
Malaria mosquito 
 
Culex quinquefasciatus
Southern house mosquito 
 
hideOrthologs in non-Dipteran Insects (EOG6PG4VS, EOG65QG94, EOG68GV09)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\GB42866
 
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG000461
 
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH20868
 
Atta cephalotes
Leafcutter ant 
Acep\ACEP17384
 
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO18743
 
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL20382
 
Linepithema humile
Argentine ant 
Lhum\LH11035
 
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB11297
 
Solenopsis invicta
Red fire ant 
Sinv\SINV25387
 
Solenopsis invicta
Red fire ant 
Sinv\SINV25358
 
Acyrthosiphon pisum
Pea aphid 
 
Bombyx mori
Silkmoth 
 
Pediculus humanus
Human body louse 
 
Tribolium castaneum
Red flour beetle 
 
hideOrthologs in non-Insect Arthropods (EOG6DV423, EOG6DZ0B5, EOG6NGF3H)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Ixodes scapularis
Deer tick 
 
hideOrthologs in non-Arthropod Metazoa (EOG6M6J99, EOG6WT84T, EOG6ZSNX6)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Caenorhabditis elegans
Nematode 
 
Strongylocentrotus purpuratus
Purple sea urchin 
 
hide Human Orthologs (0)
Gene
OMIM
HGNC
hideAAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila simulans
Drosophila sechellia
Drosophila erecta
Drosophila yakuba
Drosophila ananassae
Drosophila pseudoobscura pseudoobscura
Drosophila persimilis
Drosophila willistoni
Drosophila virilis
Drosophila mojavensis
Drosophila grimshawi
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 21 )
Bloomington
Harvard
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 54 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
'bruchpilot' is German for 'crash pilot'.
Named "bruchpilot" as mutants for this gene display unstable flight and quickly crash to the ground.
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: brp CG12932
Source for merge of: brp CG12933 CG30336 CG30337
Source for merge of: brp Mabnc82
Additional comments
Annotations CG34146 and CG12932 merged as CG42344 in release 5.9 of the genome annotation.
Annotations CG12933, CG30336 and CG30337 merged as CG34146 (which corresponds to brp) in release 5.1 of the genome annotation.
Annotation CG1931 split into CG30337 and CG30336 in release 3 of the genome annotation.
hide Other Comments
brp plays a role in promoting calcium channel clustering at the active zone.
brp mutant neuromuscular synapses suffer from active zone membrane defects, a complete loss of presynaptic dense bodies and severely depressed evoked vesicle release. Presynaptic Ca2+-channels become diffusely distributed in brp mutants.
RNAi knockdown flies show synaptic defects, impairment of walking behaviour and unstable flight.
Encodes a protein which is expressed in the neuropil structures of the adult brain.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
hide Synonyms & Secondary IDs ( 23 )
Reported As
Symbol Synonym
CG12933
 
Mabnc82
 
nc82
(Python and Stocker, 2002, Ruta et al., 2010, Hong et al., 2009, Masuyama et al., 2012, Hattori et al., 2007, Koh et al., 2007, Ohyama et al., 2007, Tayler et al., 2012, Sweeney et al., 2011, Jafari et al., 2012, Baker et al., 2007, Rajan and Perrimon, 2012, Doherty et al., 2009, Liebl et al., 2008, Hergarden et al., 2012, Chen and Hing, 2008, Benton et al., 2007, Sweeney et al., 2007, Dahanukar et al., 2007, Nicolaï et al., 2010, Tamura et al., 2010, Liu et al., 2007, Komiyama et al., 2007, Kreher et al., 2005, Goldman et al., 2005, Berdnik et al., 2006, Ang et al., 2006, Ataman et al., 2006, Dudu et al., 2006, Dickman, 2006, Dickman et al., 2006, Longair et al., 2007, Hiesinger et al., 2005, Fishilevich et al., 2005, Liu et al., 2006, Yoshihara et al., 2005, Ramaekers et al., 2005, Pielage et al., 2005, Fishilevich and Vosshall, 2005, Larsson et al., 2004, Wang et al., 2004, Wucherpfennig et al., 2003, Marie et al., 2004, Yu et al., 2004, Hummel and Zipursky, 2004, Zhu and Luo, 2004, Jefferis et al., 2002, Zhu et al., 2003, Hummel et al., 2003, Pereanu and Hartenstein, 2003, Rein et al., 2002, Jefferis et al., 2001, Scott et al., 2001, Vosshall et al., 2000, Zhu et al., 2006, Mehta, 2005, Zhai et al., 2006, Kurtovic et al., 2007, Pielage et al., 2006, Jefferis et al., 2007, Wilson and Laurent, 2005, Wu et al., 2005, Dekker et al., 2006, Beuchle et al., 2007, Park et al., 2002, Zweier et al., 2009, Guan et al., 2011, Lieber et al., 2011, Besson et al., 2011, Miyazaki and Ito, 2010, Pereanu et al., 2010, Klose et al., 2010, Datta et al., 2008, Lai et al., 2008, Loewen et al., 2006, Nakayama et al., 2006, Fischer et al., 2009, Edwards and Meinertzhagen, 2009, Benton et al., 2009, de Vries and Clandinin, 2012, Ishimoto et al., 2009, Yu et al., 2009, Gu et al., 2009, Mao and Davis, 2009, Iyengar et al., 2006, Rothenfluh et al., 2006, Joseph et al., 2009, Claridge-Chang et al., 2009, Pack-Chung et al., 2007, Berdnik et al., 2008, Izergina et al., 2009, Belay et al., 2007, Dickman and Davis, 2009, Li et al., 2010, Sokol et al., 2008, Miyamoto and Amrein, 2008, Bao et al., 2007, Koganezawa et al., 2010, Potter et al., 2010, Blagburn, 2008, Tanaka et al., 2008, Fergestad et al., 2010, Das et al., 2008, Chou et al., 2010, Tea et al., 2010, Repnikova et al., 2010, Schulte et al., 2010, Cachero et al., 2010, Hamanaka and Meinertzhagen, 2010, Cognigni et al., 2011, Morante et al., 2011, Gordon and Scott, 2009, Jordán-Álvarez et al., 2012, Albornoz et al., 2008, Kahsai and Winther, 2011, Kahsai et al., 2012, Bousquet et al., 2012, Sun et al., 2009, Krüttner et al., 2012, Starostina et al., 2012, Carhan et al., 2005, Hampel et al., 2011, Chen et al., 2011, Keleman et al., 2012, Zhou et al., 2012)
Name Synonym
Bruchpilot
(Bogdanik et al., 2008, Koh et al., 2007, Das et al., 2010, Cheng et al., 2011, Liebl et al., 2008, Ratnaparkhi et al., 2008, Oh et al., 2008, Chen and Hing, 2008, Chouhan et al., 2010, Banovic et al., 2010, Nicolaï et al., 2010, Mosca and Schwarz, 2010, Pielage et al., 2006, Stowers and Isacoff, 2007, Weyhersmüller et al., 2011, Godena et al., 2011, Sprecher et al., 2011, Lieber et al., 2011, Besson et al., 2011, Pereanu et al., 2010, Klose et al., 2010, Schwenkert et al., 2008, Schmid et al., 2006, Vijayakrishnan et al., 2009, Fischer et al., 2009, Wairkar et al., 2009, Edwards and Meinertzhagen, 2009, Qurashi et al., 2007, Kim et al., 2009, Frank et al., 2009, Ishimoto et al., 2009, Gilestro et al., 2009, Gu et al., 2009, Fouquet et al., 2009, Iyengar et al., 2006, Kain et al., 2009, Wairkar et al., 2008, Daniels et al., 2008, Ly et al., 2008, Graf et al., 2009, Kohsaka et al., 2007, Fuentes-Medel et al., 2009, Johnson et al., 2009, Viquez et al., 2009, Nieratschker et al., 2009, Blagburn, 2008, Sánchez-Soriano et al., 2010, Owald et al., 2010, Kim et al., 2010, Marie et al., 2010, Inaki et al., 2010, Choi et al., 2010, Nagai et al., 2010, Tsurudome et al., 2010, Baas et al., 2011, Pilgram et al., 2011, Roy et al., 2007, Gohl et al., 2011, Zeng et al., 2007, Liu et al., 2011, Sun et al., 2011, Lee and Wu, 2010, Knapek et al., 2011, Albornoz et al., 2008, Kahsai and Winther, 2011, Schmid et al., 2008, James and Broihier, 2011, Kuromi et al., 2010, Bruckner et al., 2012, Rohrbough and Broadie, 2010, Awasaki et al., 2011, Awasaki et al., 2008, Liu et al., 2011, Chen and Ganetzky, 2012, Dickman et al., 2012, Miller et al., 2012, Koon et al., 2011, Kim et al., 2012, Beck et al., 2012, Jansen et al., 2009, Mosca et al., 2012, Carlsson et al., 2010)
CG12932
 
Monoclonal antibody nc82
Secondary FlyBase IDs
  • FBgn0027377
  • FBgn0033418
  • FBgn0033419
  • FBgn0033420
  • FBgn0050336
  • FBgn0050337
  • FBgn0083982
  • FBgn0086376
hide References ( 319 )
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hide Recent research papers ( 78 )
Zang et al., 2013, EMBO Rep. 14(1): 87--94
Nicotinamide mononucleotide adenylyltransferase maintains active zone structure by stabilizing Bruchpilot. [FBrf0220367]
Beck et al., 2012, J. Neurosci. 32(20): 7058--7073
Regulation of Fasciclin II and Synaptic Terminal Development by the Splicing Factor Beag. [FBrf0218385]
Bousquet et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(1): 249--254
Expression of a desaturase gene, desat1, in neural and nonneural tissues separately affects perception and emission of sex pheromones in Drosophila. [FBrf0217137]
Bruckner et al., 2012, J. Neurosci. 32(48): 17048--17058
Fife, a Drosophila Piccolo-RIM Homolog, Promotes Active Zone Organization and Neurotransmitter Release. [FBrf0220079]
Chen and Ganetzky, 2012, J. Cell Biol. 196(4): 529--543
A neuropeptide signaling pathway regulates synaptic growth in Drosophila. [FBrf0217500]
de Vries and Clandinin, 2012, Curr. Biol. 22(5): 353--362
Loom-sensitive neurons link computation to action in the Drosophila visual system. [FBrf0217719]
Dickman et al., 2012, J. Neurosci. 32(25): 8716--8724
Snapin is Critical for Presynaptic Homeostatic Plasticity. [FBrf0218676]
Füger et al., 2012, PLoS Genet. 8(11): e1003066
Spastic Paraplegia Mutation N256S in the Neuronal Microtubule Motor KIF5A Disrupts Axonal Transport in a Drosophila HSP Model. [FBrf0220146]
Graf et al., 2012, J. Neurosci. 32(47): 16586--16596
RIM Promotes Calcium Channel Accumulation at Active Zones of the Drosophila Neuromuscular Junction. [FBrf0220028]
Hergarden et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(10): 3967--3972
Allatostatin-A neurons inhibit feeding behavior in adult Drosophila. [FBrf0217661]
Jafari et al., 2012, PLoS Biol. 10(3): e1001280
Combinatorial activation and repression by seven transcription factors specify Drosophila odorant receptor expression. [FBrf0217822]
Jordán-Álvarez et al., 2012, J. Cell Sci. 125(15): 3621--3629
Presynaptic PI3K activity triggers the formation of glutamate receptors at neuromuscular terminals of Drosophila. [FBrf0219610]
Kahsai et al., 2012, Neuroscience 208: 11--26
Distribution of metabotropic receptors of serotonin, dopamine, GABA, glutamate, and short neuropeptide F in the central complex of Drosophila. [FBrf0217851]
Keleman et al., 2012, Nature 489(7414): 145--149
Dopamine neurons modulate pheromone responses in Drosophila courtship learning. [FBrf0219398]
Kim and Marqués, 2012, Dev. Neurobiol. 72(12): 1541--1558
The Ly6 neurotoxin-like molecule target of wit regulates spontaneous neurotransmitter release at the developing neuromuscular junction in Drosophila. [FBrf0219871]
Kim et al., 2012, Genes Dev. 26(9): 974--987
Drosophila Neto is essential for clustering glutamate receptors at the neuromuscular junction. [FBrf0218161]
Koles et al., 2012, J. Biol. Chem. 287(20): 16820--16834
Mechanism of evenness interrupted (evi)-exosome release at synaptic boutons. [FBrf0218323]
Krauchunas et al., 2012, Dev. Biol. 370(1): 125--134
Protein phosphorylation changes reveal new candidates in the regulation of egg activation and early embryogenesis in D. melanogaster. [FBrf0219342]
Krüttner et al., 2012, Neuron 76(2): 383--395
Drosophila CPEB Orb2A Mediates Memory Independent of Its RNA-Binding Domain. [FBrf0219767]
Lloyd et al., 2012, Neuron 74(2): 344--360
The p150(Glued) CAP-Gly Domain Regulates Initiation of Retrograde Transport at Synaptic Termini. [FBrf0218160]
Lutas et al., 2012, G3 (Bethesda) 2(1): 59--69
Genetic analysis in Drosophila reveals a role for the mitochondrial protein p32 in synaptic transmission. [FBrf0217628]
Masuyama et al., 2012, J. Neurogenet. 26(1): 89--102
Mapping neural circuits with activity-dependent nuclear import of a transcription factor. [FBrf0217864]
Miller et al., 2012, J. Neurosci. 32(40): 13776--13786
Analysis of synaptic growth and function in Drosophila with an extended larval stage. [FBrf0219554]
Mosca et al., 2012, Nature 484(7393): 237--241
Trans-synaptic Teneurin signalling in neuromuscular synapse organization and target choice. [FBrf0218053]
Nechipurenko and Broihier, 2012, J. Cell Biol. 196(3): 345--362
FoxO limits microtubule stability and is itself negatively regulated by microtubule disruption. [FBrf0217391]
Nfonsam et al., 2012, PLoS ONE 7(8): e44583
Analysis of the Transcriptomes Downstream of Eyeless and the Hedgehog, Decapentaplegic and Notch Signaling Pathways in Drosophila melanogaster. [FBrf0219414]
Owald et al., 2012, Nat. Neurosci. 15(9): 1219--1226
Cooperation of Syd-1 with Neurexin synchronizes pre- with postsynaptic assembly. [FBrf0219330]
Penney et al., 2012, Neuron 74(1): 166--178
TOR Is Required for the Retrograde Regulation of Synaptic Homeostasis at the Drosophila Neuromuscular Junction. [FBrf0218076]
Prieto-Godino et al., 2012, PLoS Biol. 10(10): e1001400
Embryonic origin of olfactory circuitry in Drosophila: contact and activity-mediated interactions pattern connectivity in the antennal lobe. [FBrf0219665]
Rajan and Perrimon, 2012, Cell 151(1): 123--137
Drosophila cytokine unpaired 2 regulates physiological homeostasis by remotely controlling insulin secretion. [FBrf0219535]
Sasayama et al., 2012, PLoS ONE 7(6): e39483
Knockdown of the Drosophila Fused in Sarcoma (FUS) Homologue Causes Deficient Locomotive Behavior and Shortening of Motoneuron Terminal Branches. [FBrf0218682]
Shohat-Ophir et al., 2012, Science 335(6074): 1351--1355
Sexual deprivation increases ethanol intake in Drosophila. [FBrf0217810]
Starostina et al., 2012, J. Neurosci. 32(13): 4665--4674
A Drosophila DEG/ENaC Subunit Functions Specifically in Gustatory Neurons Required for Male Courtship Behavior. [FBrf0217925]
Stephan et al., 2012, J. Neurosci. 32(46): 16080--16094
Drosophila Psidin Regulates Olfactory Neuron Number and Axon Targeting through Two Distinct Molecular Mechanisms. [FBrf0220017]
Tayler et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(50): 20697--20702
A neuropeptide circuit that coordinates sperm transfer and copulation duration in Drosophila. [FBrf0220217]
Tsai et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(43): 17699--17704
Activity-dependent retrograde laminin A signaling regulates synapse growth at Drosophila neuromuscular junctions. [FBrf0219768]
Weber et al., 2012, PLoS ONE 7(4): e34745
Genome-Wide Association Analysis of Oxidative Stress Resistance in Drosophila melanogaster. [FBrf0218073]
Zhou et al., 2012, J. Neurosci. 32(41): 14281--14287
Molecular Genetic Analysis of Sexual Rejection: Roles of Octopamine and Its Receptor OAMB in Drosophila Courtship Conditioning. [FBrf0219612]
Abou Tayoun et al., 2011, J. Neurosci. 31(39): 13897--13910
The Drosophila SK Channel (dSK) Contributes to Photoreceptor Performance by Mediating Sensitivity Control at the First Visual Network. [FBrf0216279]
Baas et al., 2011, Development 138(3): 553--563
Sugar-free frosting, a homolog of SAD kinase, drives neural-specific glycan expression in the Drosophila embryo. [FBrf0212690]
Besson et al., 2011, J. Comp. Neurol. 519(14): 2734--2757
Involvement of the drosophila taurine/aspartate transporter dEAAT2 in selective olfactory and gustatory perceptions. [FBrf0214574]
Chen et al., 2011, PLoS ONE 6(4): e18853
Highly Tissue Specific Expression of Sphinx Supports Its Male Courtship Related Role in Drosophila melanogaster. [FBrf0213606]
Cheng et al., 2011, J. Cell Biol. 194(6): 921--935
S6 kinase localizes to the presynaptic active zone and functions with PDK1 to control synapse development. [FBrf0216911]
Christiansen et al., 2011, J. Neurosci. 31(26): 9696--9707
Presynapses in Kenyon Cell Dendrites in the Mushroom Body Calyx of Drosophila. [FBrf0214059]
Cognigni et al., 2011, Cell Metab. 13(1): 92--104
Enteric neurons and systemic signals couple nutritional and reproductive status with intestinal homeostasis. [FBrf0212594]
Damulewicz and Pyza, 2011, PLoS ONE 6(6): e21258
The Clock Input to the First Optic Neuropil of Drosophila melanogaster Expressing Neuronal Circadian Plasticity. [FBrf0214354]
Danjo et al., 2011, PLoS ONE 6(2): e17131
A tripartite synapse model in Drosophila. [FBrf0213114]
Godena et al., 2011, PLoS ONE 6(3): e17808
TDP-43 Regulates Drosophila Neuromuscular Junctions Growth by Modulating Futsch/MAP1B Levels and Synaptic Microtubules Organization. [FBrf0213270]
Gohl et al., 2011, Nat. Methods 8(3): 231--237
A versatile in vivo system for directed dissection of gene expression patterns. [FBrf0213287]
Gonsalves et al., 2011, BMC Genomics 12: 475
Genome-wide examination of the transcriptional response to ecdysteroids 20-hydroxyecdysone and ponasterone A in Drosophila melanogaster. [FBrf0216487]
Guan et al., 2011, Learn. Mem. 18(4): 191--206
Altered gene regulation and synaptic morphology in Drosophila learning and memory mutants. [FBrf0213277]
Hampel et al., 2011, Nat. Methods 8(3): 253--259
Drosophila Brainbow: a recombinase-based fluorescence labeling technique to subdivide neural expression patterns. [FBrf0213136]
Han et al., 2011, Proc. Natl. Acad. Sci. U.S.A. 108(23): 9673--9678
Enhancer-driven membrane markers for analysis of nonautonomous mechanisms reveal neuron-glia interactions in Drosophila. [FBrf0213916]
James and Broihier, 2011, Development 138(15): 3273--3286
Crimpy inhibits the BMP homolog Gbb in motoneurons to enable proper growth control at the Drosophila neuromuscular junction. [FBrf0214390]
Kahsai and Winther, 2011, J. Comp. Neurol. 519(2): 290--315
Chemical neuroanatomy of the Drosophila central complex: distribution of multiple neuropeptides in relation to neurotransmitters. [FBrf0212649]
Keene et al., 2011, J. Neurosci. 31(17): 6527--6534
Distinct visual pathways mediate Drosophila larval light avoidance and circadian clock entrainment. [FBrf0213587]
Keller et al., 2011, Neuron 72(5): 760--775
Glial-derived prodegenerative signaling in the Drosophila neuromuscular system. [FBrf0216904]
King et al., 2011, J. Neurosci. 31(3): 1139--1148
Drosophila tao Controls Mushroom Body Development and Ethanol-Stimulated Behavior through par-1. [FBrf0212818]
Knapek et al., 2011, J. Neurosci. 31(9): 3453--3458
Bruchpilot, a synaptic active zone protein for anesthesia-resistant memory. [FBrf0213189]
Koon et al., 2011, Nat. Neurosci. 14(2): 190--199
Autoregulatory and paracrine control of synaptic and behavioral plasticity by octopaminergic signaling. [FBrf0212895]
Lieber et al., 2011, Neuron 69(3): 468--481
DSL-Notch Signaling in the Drosophila Brain in Response to Olfactory Stimulation. [FBrf0212999]
Liu et al., 2011, J. Neurosci. 31(6): 2052--2063
Drosophila Acyl-CoA Synthetase Long-Chain Family Member 4 Regulates Axonal Transport of Synaptic Vesicles and Is Required for Synaptic Development and Transmission. [FBrf0212968]
Liu et al., 2011, Science 334(6062): 1565--1569
RIM-binding protein, a central part of the active zone, is essential for neurotransmitter release. [FBrf0216992]
Miśkiewicz et al., 2011, Neuron 72(5): 776--788
ELP3 Controls Active Zone Morphology by Acetylating the ELKS Family Member Bruchpilot. [FBrf0216903]
Morante et al., 2011, Development 138(4): 687--693
Cell migration in Drosophila optic lobe neurons is controlled by eyeless/Pax6. [FBrf0212874]
Müller et al., 2011, Neuron 69(4): 749--762
Rab3-GAP Controls the Progression of Synaptic Homeostasis at a Late Stage of Vesicle Release. [FBrf0213055]
Pak et al., 2011, Proc. Natl. Acad. Sci. U.S.A. 108(30): 12390--12395
Mutation of the conserved polyadenosine RNA binding protein, ZC3H14/dNab2, impairs neural function in Drosophila and humans. [FBrf0214553]
Peled and Isacoff, 2011, Nat. Neurosci. 14(4): 519--526
Optical quantal analysis of synaptic transmission in wild-type and rab3-mutant Drosophila motor axons. [FBrf0213336]
Pilgram et al., 2011, J. Neurosci. 31(2): 492--500
The RhoGAP crossveinless-c Interacts with Dystrophin and Is Required for Synaptic Homeostasis at the Drosophila Neuromuscular Junction. [FBrf0212767]
Pitman et al., 2011, Curr. Biol. 21(10): 855--861
A pair of inhibitory neurons are required to sustain labile memory in the Drosophila mushroom body. [FBrf0213725]
Rossetto et al., 2011, Hum. Mol. Genet. 20(21): 4248--4257
Defhc1.1, a homologue of the juvenile myoclonic gene EFHC1, modulates architecture and basal activity of the neuromuscular junction in Drosophila. [FBrf0216330]
Sarthi and Elefant, 2011, PLoS ONE 6(10): e26202
dTip60 HAT Activity Controls Synaptic Bouton Expansion at the Drosophila Neuromuscular Junction. [FBrf0216592]
Shakiryanova et al., 2011, J. Neurosci. 31(25): 9093--9100
Differential Control of Presynaptic CaMKII Activation and Translocation to Active Zones. [FBrf0213996]
Sprecher et al., 2011, Dev. Biol. 358(1): 33--43
The Drosophila larval visual system: High-resolution analysis of a simple visual neuropil. [FBrf0215208]
Sun et al., 2011, J. Neurosci. 31(2): 687--699
Neuroligin 2 is required for synapse development and function at the Drosophila neuromuscular junction. [FBrf0212770]
Sweeney et al., 2011, Neuron 72(5): 734--747
Secreted Semaphorins from Degenerating Larval ORN Axons Direct Adult Projection Neuron Dendrite Targeting. [FBrf0216932]
Vrailas-Mortimer et al., 2011, Dev. Cell 21(4): 783--795
A Muscle-Specific p38 MAPK/Mef2/MnSOD Pathway Regulates Stress, Motor Function, and Life Span in Drosophila. [FBrf0216446]
Weyhersmüller et al., 2011, J. Neurosci. 31(16): 6041--6052
Rapid Active Zone Remodeling during Synaptic Plasticity. [FBrf0213525]
hide Recent reviews ( 1 )
Broadie et al., 2011, Dev. Neurobiol. 71(11): 1102--1130
Extracellular matrix and its receptors in drosophila neural development. [FBrf0216377]