A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\γTub23C

General Information
SymbolDmel\γTub23CSpeciesD. melanogaster
Nameγ-Tubulin at 23CAnnotation symbolCG3157
Feature typeprotein_coding_geneFlyBase IDFBgn0260639
Gene Model StatusCurrent Stock availability 9 publicly available
Also Known Asγtub, γ-tub, gammaTub23C, γ-Tub23C, γ-tubulin, GTU88*
Genomic Location
Chromosome (arm)2LRecombination map
Cytogenetic map23C1-23C4Sequence location2L:2,972,892..2,974,862 [+]

Genomic Maps

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modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene γ-Tubulin at 23C is referred to in FlyBase by the symbol Dmel\γTub23C (CG3157, FBgn0260639). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: GTP binding; guanyl nucleotide binding; microtubule minus-end binding. There is experimental evidence that it is involved in the biological process: centrosome organization; microtubule nucleation; mitotic sister chromatid separation; mitosis; mitotic spindle organization; centriole-centriole cohesion; centrosome duplication; regulation of cell cycle. 20 alleles are reported. The phenotypes of these alleles are annotated with: organ system subdivision; adult segment; organ system; thoracic segment; organelle; spindle; imaginal precursor; external compound sense organ; intracellular organelle part; adult; spindle microtubule. It has one annotated transcript and one annotated polypeptide. Protein features are: Gamma tubulin; Tubulin; Tubulin, C-terminal; Tubulin, conserved site; Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ, C-terminal; Tubulin/FtsZ, GTPase domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, larval trachea, adult ovary. Comments on Affy2 ProbeSet: ProbeSet 1626125_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of gammaTub23C. Gene sequence location is 2L:2972892..2974862.

External Summaries
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
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FB2012_01
References
Sequence features
Controlled Vocabulary Terms
FB2011_10
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
23C1-23C4  
Left limit from inclusion within Df(2L)JS17 (FBrf0125088) Right limit from inclusion within Df(2L)JS17 (FBrf0125088); Limits computationally determined from genome sequence between P{PZ}lilli00632 and P{PZ}toc01361  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
23C1-23C4  
(determined by in situ hybridisation)  
23C-23D  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\γTub23C for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0290241 FBtr0077678 FBtr0077641 FBtr0077677 FBtr0077676 FBpp0288680 FBpp0077362 FBpp0077326 FBpp0077361 FBpp0077360 FBti0051118 FBti0077002 FBti0021666 FBti0007753 FBti0003570 FBti0071036 FBti0025992
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0077641
  1853
  475
Additional Transcript Data & Comments
Reported size (kB)
1.875 (longest cDNA)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0077326  
53.3  
475  
5.78  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view Rrp1-RB Rrp1-RA gammaTub23C-RA CG9641-RB CG9641-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0260639


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0260639
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0260639 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 4474
embryo 02-04hr
 
 6028
embryo 04-06hr
 
 5019
embryo 06-08hr
 
 3279
embryo 08-10hr
 
 2533
embryo 10-12hr
 
 1632
embryo 12-14hr
 
 1024
embryo 14-16hr
 
 596
embryo 16-18hr
 
 411
embryo 18-20hr
 
 356
embryo 20-22hr
 
 270
embryo 22-24hr
 
 397
larva L1
 
 439
larva L2
 
 557
larva L3 12hr old
 
 497
larva L3 puffstage 1-2
 
 1007
larva L3 puffstage 3-6
 
 1370
larva L3 puffstage 7-9
 
 1836
white prepupae new
 
 1661
white prepupae 12hr
 
 1980
white prepupae 24hr
 
 2273
pupae 2d postWPP
 
 1364
pupae 3d postWPP
 
 1072
pupae 4d postWPP
 
 559
adult male 01day
 
 745
adult male 05day
 
 939
adult male 30day
 
 997
adult female 01day
 
 820
adult female 05day
 
 1128
adult female 30day
 
 1245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4474)
embryo 02-04hr
 (6028)
embryo 04-06hr
 (5019)
embryo 06-08hr
 (3279)
embryo 08-10hr
 (2533)
embryo 10-12hr
 (1632)
embryo 12-14hr
 (1024)
embryo 14-16hr
 (596)
embryo 16-18hr
 (411)
embryo 18-20hr
 (356)
embryo 20-22hr
 (270)
embryo 22-24hr
 (397)
larva L1
 (439)
larva L2
 (557)
larva L3 12hr old
 (497)
larva L3 puffstage 1-2
 (1007)
larva L3 puffstage 3-6
 (1370)
larva L3 puffstage 7-9
 (1836)
white prepupae new
 (1661)
white prepupae 12hr
 (1980)
white prepupae 24hr
 (2273)
pupae 2d postWPP
 (1364)
pupae 3d postWPP
 (1072)
pupae 4d postWPP
 (559)
adult male 01day
 (745)
adult male 05day
 (939)
adult male 30day
 (997)
adult female 01day
 (820)
adult female 05day
 (1128)
adult female 30day
 (1245)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4474)
embryo 02-04hr
 (6028)
embryo 04-06hr
 (5019)
embryo 06-08hr
 (3279)
embryo 08-10hr
 (2533)
embryo 10-12hr
 (1632)
embryo 12-14hr
 
 1024
embryo 14-16hr
 
 596
embryo 16-18hr
 
 411
embryo 18-20hr
 
 356
embryo 20-22hr
 
 270
embryo 22-24hr
 
 397
larva L1
 
 439
larva L2
 
 557
larva L3 12hr old
 
 497
larva L3 puffstage 1-2
 
 1007
larva L3 puffstage 3-6
 
 1370
larva L3 puffstage 7-9
 (1836)
white prepupae new
 (1661)
white prepupae 12hr
 (1980)
white prepupae 24hr
 (2273)
pupae 2d postWPP
 
 1364
pupae 3d postWPP
 
 1072
pupae 4d postWPP
 
 559
adult male 01day
 
 745
adult male 05day
 
 939
adult male 30day
 
 997
adult female 01day
 
 820
adult female 05day
 
 1128
adult female 30day
 
 1245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4474
embryo 02-04hr
 
 6028
embryo 04-06hr
 
 5019
embryo 06-08hr
 
 3279
embryo 08-10hr
 
 2533
embryo 10-12hr
 
 1632
embryo 12-14hr
 
 1024
embryo 14-16hr
 
 596
embryo 16-18hr
 
 411
embryo 18-20hr
 
 356
embryo 20-22hr
 
 270
embryo 22-24hr
 
 397
larva L1
 
 439
larva L2
 
 557
larva L3 12hr old
 
 497
larva L3 puffstage 1-2
 
 1007
larva L3 puffstage 3-6
 
 1370
larva L3 puffstage 7-9
 
 1836
white prepupae new
 
 1661
white prepupae 12hr
 
 1980
white prepupae 24hr
 
 2273
pupae 2d postWPP
 
 1364
pupae 3d postWPP
 
 1072
pupae 4d postWPP
 
 559
adult male 01day
 
 745
adult male 05day
 
 939
adult male 30day
 
 997
adult female 01day
 
 820
adult female 05day
 
 1128
adult female 30day
 
 1245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4474
embryo 02-04hr
 
 6028
embryo 04-06hr
 
 5019
embryo 06-08hr
 
 3279
embryo 08-10hr
 
 2533
embryo 10-12hr
 
 1632
embryo 12-14hr
 
 1024
embryo 14-16hr
 
 596
embryo 16-18hr
 
 411
embryo 18-20hr
 
 356
embryo 20-22hr
 
 270
embryo 22-24hr
 
 397
larva L1
 
 439
larva L2
 
 557
larva L3 12hr old
 
 497
larva L3 puffstage 1-2
 
 1007
larva L3 puffstage 3-6
 
 1370
larva L3 puffstage 7-9
 
 1836
white prepupae new
 
 1661
white prepupae 12hr
 
 1980
white prepupae 24hr
 
 2273
pupae 2d postWPP
 
 1364
pupae 3d postWPP
 
 1072
pupae 4d postWPP
 
 559
adult male 01day
 
 745
adult male 05day
 
 939
adult male 30day
 
 997
adult female 01day
 
 820
adult female 05day
 
 1128
adult female 30day
 
 1245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0260639 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 4474
embryo 02-04hr
 
 6028
embryo 04-06hr
 
 5019
embryo 06-08hr
 
 3279
embryo 08-10hr
 
 2533
embryo 10-12hr
 
 1632
embryo 12-14hr
 
 1024
embryo 14-16hr
 
 596
embryo 16-18hr
 
 411
embryo 18-20hr
 
 356
embryo 20-22hr
 
 270
embryo 22-24hr
 
 397
larva L1
 
 439
larva L2
 
 557
larva L3 12hr old
 
 497
larva L3 puffstage 1-2
 
 1007
larva L3 puffstage 3-6
 
 1370
larva L3 puffstage 7-9
 
 1836
white prepupae new
 
 1661
white prepupae 12hr
 
 1980
white prepupae 24hr
 
 2273
pupae 2d postWPP
 
 1364
pupae 3d postWPP
 
 1072
pupae 4d postWPP
 
 559
adult male 01day
 
 745
adult male 05day
 
 939
adult male 30day
 
 997
adult female 01day
 
 820
adult female 05day
 
 1128
adult female 30day
 
 1245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4474)
embryo 02-04hr
 (6028)
embryo 04-06hr
 (5019)
embryo 06-08hr
 (3279)
embryo 08-10hr
 (2533)
embryo 10-12hr
 (1632)
embryo 12-14hr
 (1024)
embryo 14-16hr
 (596)
embryo 16-18hr
 (411)
embryo 18-20hr
 (356)
embryo 20-22hr
 (270)
embryo 22-24hr
 (397)
larva L1
 (439)
larva L2
 (557)
larva L3 12hr old
 (497)
larva L3 puffstage 1-2
 (1007)
larva L3 puffstage 3-6
 (1370)
larva L3 puffstage 7-9
 (1836)
white prepupae new
 (1661)
white prepupae 12hr
 (1980)
white prepupae 24hr
 (2273)
pupae 2d postWPP
 (1364)
pupae 3d postWPP
 (1072)
pupae 4d postWPP
 (559)
adult male 01day
 (745)
adult male 05day
 (939)
adult male 30day
 (997)
adult female 01day
 (820)
adult female 05day
 (1128)
adult female 30day
 (1245)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4474)
embryo 02-04hr
 (6028)
embryo 04-06hr
 (5019)
embryo 06-08hr
 (3279)
embryo 08-10hr
 (2533)
embryo 10-12hr
 1632
embryo 12-14hr
 
 1024
embryo 14-16hr
 
 596
embryo 16-18hr
 
 411
embryo 18-20hr
 
 356
embryo 20-22hr
 
 270
embryo 22-24hr
 
 397
larva L1
 
 439
larva L2
 
 557
larva L3 12hr old
 
 497
larva L3 puffstage 1-2
 
 1007
larva L3 puffstage 3-6
 
 1370
larva L3 puffstage 7-9
 1836
white prepupae new
 1661
white prepupae 12hr
 1980
white prepupae 24hr
 2273
pupae 2d postWPP
 
 1364
pupae 3d postWPP
 
 1072
pupae 4d postWPP
 
 559
adult male 01day
 
 745
adult male 05day
 
 939
adult male 30day
 
 997
adult female 01day
 
 820
adult female 05day
 
 1128
adult female 30day
 
 1245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4474
embryo 02-04hr
 
 6028
embryo 04-06hr
 
 5019
embryo 06-08hr
 
 3279
embryo 08-10hr
 
 2533
embryo 10-12hr
 
 1632
embryo 12-14hr
 
 1024
embryo 14-16hr
 
 596
embryo 16-18hr
 
 411
embryo 18-20hr
 
 356
embryo 20-22hr
 
 270
embryo 22-24hr
 
 397
larva L1
 
 439
larva L2
 
 557
larva L3 12hr old
 
 497
larva L3 puffstage 1-2
 
 1007
larva L3 puffstage 3-6
 
 1370
larva L3 puffstage 7-9
 
 1836
white prepupae new
 
 1661
white prepupae 12hr
 
 1980
white prepupae 24hr
 
 2273
pupae 2d postWPP
 
 1364
pupae 3d postWPP
 
 1072
pupae 4d postWPP
 
 559
adult male 01day
 
 745
adult male 05day
 
 939
adult male 30day
 
 997
adult female 01day
 
 820
adult female 05day
 
 1128
adult female 30day
 
 1245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4474
embryo 02-04hr
 
 6028
embryo 04-06hr
 
 5019
embryo 06-08hr
 
 3279
embryo 08-10hr
 
 2533
embryo 10-12hr
 
 1632
embryo 12-14hr
 
 1024
embryo 14-16hr
 
 596
embryo 16-18hr
 
 411
embryo 18-20hr
 
 356
embryo 20-22hr
 
 270
embryo 22-24hr
 
 397
larva L1
 
 439
larva L2
 
 557
larva L3 12hr old
 
 497
larva L3 puffstage 1-2
 
 1007
larva L3 puffstage 3-6
 
 1370
larva L3 puffstage 7-9
 
 1836
white prepupae new
 
 1661
white prepupae 12hr
 
 1980
white prepupae 24hr
 
 2273
pupae 2d postWPP
 
 1364
pupae 3d postWPP
 
 1072
pupae 4d postWPP
 
 559
adult male 01day
 
 745
adult male 05day
 
 939
adult male 30day
 
 997
adult female 01day
 
 820
adult female 05day
 
 1128
adult female 30day
 
 1245
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0260639


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0260639
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, larval trachea, adult ovary.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0260639 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 361.05
Larval Midgut
 
 29.8
Larval Hindgut
 
 80.9
Larval Malpighian Tubules
 
 54.4
Larval Fat Body
 
 59.2
Larval Salivary Gland
 
 21.7
Larval Trachea
 
 123.875
Larval Carcass
 
 80.05
Adult Head
 
 76.3
Adult Eye
 
 78.3
Adult Brain
 
 190.5
Adult Thoracic-Abdominal Ganglion
 
 207.4
Adult Crop
 
 90.5
Adult Midgut
 
 36.5
Adult Hindgut
 
 70.6
Adult Malpighian Tubules
 
 32.3
Adult Fat Body
 
 30.9
Adult Salivary Gland no informative data
Adult Heart
 
 55.65
Adult VirginFemale Spermatheca
 
 15.2
Adult InseminatedFemale Spermatheca no informative data
Adult Ovary
 
 201.6
Adult Testis
 
 83.6
Adult Male Accessory Gland
 
 17.2
Adult Carcass
 
 50.7
Expression Level Scale
 None 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 361.05
Larval Midgut
 
 29.8
Larval Hindgut
 
 80.9
Larval Malpighian Tubules
 
 54.4
Larval Fat Body
 
 59.2
Larval Salivary Gland
 
 21.7
Larval Trachea
 
 123.875
Larval Carcass
 
 80.05
Adult Head
 
 76.3
Adult Eye
 
 78.3
Adult Brain
 
 190.5
Adult Thoracic-Abdominal Ganglion
 
 207.4
Adult Crop
 
 90.5
Adult Midgut
 
 36.5
Adult Hindgut
 
 70.6
Adult Malpighian Tubules
 
 32.3
Adult Fat Body
 
 30.9
Adult Salivary Gland no informative data
Adult Heart
 
 55.65
Adult VirginFemale Spermatheca
 
 15.2
Adult InseminatedFemale Spermatheca no informative data
Adult Ovary
 
 201.6
Adult Testis
 
 83.6
Adult Male Accessory Gland
 
 17.2
Adult Carcass
 
 50.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 361.05
Larval Midgut
 
 29.8
Larval Hindgut
 
 80.9
Larval Malpighian Tubules
 
 54.4
Larval Fat Body
 
 59.2
Larval Salivary Gland
 
 21.7
Larval Trachea
 
 123.875
Larval Carcass
 
 80.05
Adult Head
 
 76.3
Adult Eye
 
 78.3
Adult Brain
 
 190.5
Adult Thoracic-Abdominal Ganglion
 
 207.4
Adult Crop
 
 90.5
Adult Midgut
 
 36.5
Adult Hindgut
 
 70.6
Adult Malpighian Tubules
 
 32.3
Adult Fat Body
 
 30.9
Adult Salivary Gland no informative data
Adult Heart
 
 55.65
Adult VirginFemale Spermatheca
 
 15.2
Adult InseminatedFemale Spermatheca no informative data
Adult Ovary
 
 201.6
Adult Testis
 
 83.6
Adult Male Accessory Gland
 
 17.2
Adult Carcass
 
 50.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 361.05
Larval Midgut
 
 29.8
Larval Hindgut
 
 80.9
Larval Malpighian Tubules
 
 54.4
Larval Fat Body
 
 59.2
Larval Salivary Gland
 
 21.7
Larval Trachea
 
 123.875
Larval Carcass
 
 80.05
Adult Head
 
 76.3
Adult Eye
 
 78.3
Adult Brain
 
 190.5
Adult Thoracic-Abdominal Ganglion
 
 207.4
Adult Crop
 
 90.5
Adult Midgut
 
 36.5
Adult Hindgut
 
 70.6
Adult Malpighian Tubules
 
 32.3
Adult Fat Body
 
 30.9
Adult Salivary Gland no informative data
Adult Heart
 
 55.65
Adult VirginFemale Spermatheca
 
 15.2
Adult InseminatedFemale Spermatheca no informative data
Adult Ovary
 
 201.6
Adult Testis
 
 83.6
Adult Male Accessory Gland
 
 17.2
Adult Carcass
 
 50.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0260639 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 361.05
Larval Midgut
 
 29.8
Larval Hindgut
 
 80.9
Larval Malpighian Tubules
 
 54.4
Larval Fat Body
 
 59.2
Larval Salivary Gland
 
 21.7
Larval Trachea
 
 123.875
Larval Carcass
 
 80.05
Adult Head
 
 76.3
Adult Eye
 
 78.3
Adult Brain
 
 190.5
Adult Thoracic-Abdominal Ganglion
 
 207.4
Adult Crop
 
 90.5
Adult Midgut
 
 36.5
Adult Hindgut
 
 70.6
Adult Malpighian Tubules
 
 32.3
Adult Fat Body
 
 30.9
Adult Salivary Gland no informative data
Adult Heart
 
 55.65
Adult VirginFemale Spermatheca
 
 15.2
Adult InseminatedFemale Spermatheca no informative data
Adult Ovary
 
 201.6
Adult Testis
 
 83.6
Adult Male Accessory Gland
 
 17.2
Adult Carcass
 
 50.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 361.05
Larval Midgut
 
 29.8
Larval Hindgut
 
 80.9
Larval Malpighian Tubules
 
 54.4
Larval Fat Body
 
 59.2
Larval Salivary Gland
 
 21.7
Larval Trachea
 
 123.875
Larval Carcass
 
 80.05
Adult Head
 
 76.3
Adult Eye
 
 78.3
Adult Brain
 
 190.5
Adult Thoracic-Abdominal Ganglion
 
 207.4
Adult Crop
 
 90.5
Adult Midgut
 
 36.5
Adult Hindgut
 
 70.6
Adult Malpighian Tubules
 
 32.3
Adult Fat Body
 
 30.9
Adult Salivary Gland no informative data
Adult Heart
 
 55.65
Adult VirginFemale Spermatheca
 
 15.2
Adult InseminatedFemale Spermatheca no informative data
Adult Ovary
 
 201.6
Adult Testis
 
 83.6
Adult Male Accessory Gland
 
 17.2
Adult Carcass
 
 50.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 361.05
Larval Midgut
 
 29.8
Larval Hindgut
 
 80.9
Larval Malpighian Tubules
 
 54.4
Larval Fat Body
 
 59.2
Larval Salivary Gland
 
 21.7
Larval Trachea
 
 123.875
Larval Carcass
 
 80.05
Adult Head
 
 76.3
Adult Eye
 
 78.3
Adult Brain
 
 190.5
Adult Thoracic-Abdominal Ganglion
 
 207.4
Adult Crop
 
 90.5
Adult Midgut
 
 36.5
Adult Hindgut
 
 70.6
Adult Malpighian Tubules
 
 32.3
Adult Fat Body
 
 30.9
Adult Salivary Gland no informative data
Adult Heart
 
 55.65
Adult VirginFemale Spermatheca
 
 15.2
Adult InseminatedFemale Spermatheca no informative data
Adult Ovary
 
 201.6
Adult Testis
 
 83.6
Adult Male Accessory Gland
 
 17.2
Adult Carcass
 
 50.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 361.05
Larval Midgut
 
 29.8
Larval Hindgut
 
 80.9
Larval Malpighian Tubules
 
 54.4
Larval Fat Body
 
 59.2
Larval Salivary Gland
 
 21.7
Larval Trachea
 
 123.875
Larval Carcass
 
 80.05
Adult Head
 
 76.3
Adult Eye
 
 78.3
Adult Brain
 
 190.5
Adult Thoracic-Abdominal Ganglion
 
 207.4
Adult Crop
 
 90.5
Adult Midgut
 
 36.5
Adult Hindgut
 
 70.6
Adult Malpighian Tubules
 
 32.3
Adult Fat Body
 
 30.9
Adult Salivary Gland no informative data
Adult Heart
 
 55.65
Adult VirginFemale Spermatheca
 
 15.2
Adult InseminatedFemale Spermatheca no informative data
Adult Ovary
 
 201.6
Adult Testis
 
 83.6
Adult Male Accessory Gland
 
 17.2
Adult Carcass
 
 50.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland no informative data
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca no informative data
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 76.3
 
NA 
Eye
 
 78.3
 
NA 
Brain
 
 190.5
 
361.05 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 207.4
 
NA 
Crop
 
 90.5
 
29.8 
Midgut
 
 36.5
 
80.9 
Hindgut
 
 70.6
 
54.4 
Malpighian Tubules
 
 32.3
 
59.2 
Fat Body
 
 30.9
 
21.7 
Salivary Gland
 
 no informative data
 
NA 
Heart
 
 55.65
 
123.875 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 15.2
 
NA 
InseminatedFemale Spermatheca
 
 no informative data
 
NA 
Ovary
 
 201.6
 
NA 
Testis
 
 83.6
 
NA 
Male Accessory Gland
 
 17.2
 
80.05 
Carcass
 
 50.7

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
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A cluster of genes with similar mRNA expression dynamics across development.
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Allele
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hide Classical Alleles ( 11 )
For All Classical Alleles Show

Allele of γTub23CClassMutagenStocksKnown lesion
γTub23CA6-22 Yes
γTub23CA14-9hypomorphic allele - genetic evidence1 Yes
γTub23CA15-2loss of function allele1 Yes
γTub23Cbmps11 Yes
γTub23Cbmps20 Yes
γTub23Cbmps30 Yes
γTub23Cbmps40 Yes
γTub23Cbmps50 Yes
γTub23CPIloss of function allele0 Yes
γTub23CPl-2antimorphic allele - genetic evidence
0 Yes
γTub23Cunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 9 )
For All Alleles Carried on Transgenic Constructs Show

Allele of γTub23CClassMutagenStocksKnown lesion
γTub23CGD163971 Yes
γTub23CGD87491 Yes
γTub23CJF017221 Yes
γTub23CKK1075001 Yes
γTub23C+t90 Yes
γTub23C+tLa0 Yes
γTub23CAct5C.T:Avic\GFP0 Yes
γTub23CdsRNA.cMa0 --
γTub23CΔ0 Yes
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hide Gene Ontology: Function, Process & Cellular Component ( 23 unique terms )
hide Terms Based on Experimental Evidence ( 15 terms )
Molecular Function
CV term
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inferred from direct assay
inferred from direct assay
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CV term
References
inferred from mutant phenotype
inferred from direct assay
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from physical interaction with Grip128
inferred from physical interaction with Grip163
inferred from direct assay
inferred from direct assay
inferred from physical interaction with Grip84
inferred from physical interaction with l(1)dd4
hide Terms Based on Predictions or Assertions ( 9 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity
inferred from sequence or structural similarity with UniProtKB:P23330
Biological Process
CV term
References
inferred from sequence or structural similarity
non-traceable author statement
Cellular Component
CV term
References
inferred from sequence or structural similarity with UniProtKB:P23330
inferred from sequence or structural similarity
inferred from sequence or structural similarity with UniProtKB:P23330
inferred from sequence or structural similarity with UniProtKB:P23330
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Please look at the allele data for full details of the genetic interactions
γTub23C allele
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Bloomington
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
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Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
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cDNA Clones, End Sequenced (ESTs)
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polyclonal
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Source for database identity of
Source for database merge of
Source for merge of: γTub23C l(2)23Ce
Additional comments
The "Pearl-2" allele of "γTub23C" (γTub23C[Pl-2]) maps to the same chromosomal location as the Pl[1] mutant allele of the "Pl, Pearl" locus. Both mutations have the same unique combination of mutant phenotypes, but the Pl[1] mutation is no longer extant and so the relationship between the "γTub23C" and "Pl" loci cannot be tested.
hide Other Comments
γTub23C is required for efficient recruitment of pericentriolar material.
RNAi screen using dsRNA made from templates generated with primers directed against this gene results in the formation of an aberrantly long, monopolar spindle when assayed in S2 cells. This phenotype can be observed when the screen is performed with or without Cdc27 dsRNA.
SL2 cells treated with dsRNA against γTub23C show a clear increase in the mitotic index compared to control cells. The treated cells show bipolar monastral and monopolar anastral spindle organisation with metaphase-like chromosome arrangements.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
Immunoblot analysis and immunolocalisation show that γTub23C and γTub37C are differentially expressed during gametogenesis and development.
Subcellular localisation of the protein during the cell cycle of cells with and without centrioles is determined. Data suggests centrioles are not essential to the formation of a functional mitotic spindle, but participate in the focal concentration of γTub23C and γTub37C protein during both interphase and mitosis.
γTub23C is required for spermatogenesis.
γTub23C is required for the structure as well as the function of the microtubule organising center MTOC.
Drosophila γ tubulin is part of a complex containing Cp190 and Map60 gene products.
γTub23C has been cloned and sequenced.
Isolated from a D.melanogaster ovary cDNA library using an A.nidulans mipA gene cDNA probe, under low stringency conditions.
A γTub23C cDNA has been cloned and sequenced.
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RefSeq (Transcripts)
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BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
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FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
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InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
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modMine - Data generated by the modENCODE project.
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hide Synonyms & Secondary IDs ( 46 )
Reported As
Symbol Synonym
gamma tubulin
γTub23CD
Name Synonym
&ggr-tubulin
Gamma-tubulin
lethal (2) 23Ce
 
γ-tubulin
(Dix and Raff, 2007, Salisbury, 2004, Januschke et al., 2005, Kwon and Scholey, 2004, Cottam et al., 2004, Greaves, 2001, Fuse et al., 2003, Albertson and Doe, 2003, Mathe et al., 2003, Gergely, 2002, Mollinari et al., 2002, Ohkura et al., 2001, Lee et al., 2001, Wakefield et al., 2001, Bolivar et al., 2001, MacDougall et al., 2001, Huynh et al., 2001, Ceron et al., 2001, Megraw et al., 2001, Gunawardane et al., 2000, Barbosa et al., 2000, Riparbelli et al., 2000, Grieder et al., 2000, Callaini et al., 1999, Su and Vidwans, 2000, Moritz et al., 2000, Lemos et al., 2000, Lange et al., 2000, Brent et al., 2000, Afshar et al., 2000, Sibon et al., 2000, Vidwans et al., 1999, Moutinho-Santos et al., 1999, Gunawardane et al., 1999, Bonaccorsi et al., 2000, Swan et al., 1999, Vaizel-Ohayon and Schejter, 1999, Gho et al., 1999, Megraw et al., 1999, Oegema et al., 1999, Bamburg et al., 1999, Herrmann et al., 1998, Lajoie-Mazenc et al., 1994, Marshall, 1998, Riparbelli and Callaini, 1998, Davis, 1997, Callaini et al., 1997, Li and Kaufman, 1996, Moritz et al., 1995, Moritz and Alberts, 1992, Wilson et al., 2004, Silvanovich et al., 2003, Gunawardane et al., 2003, Murphy, 2003, Prigent et al., 2005, Roper and Brown, 2004, Yamashita et al., 2003, Verollet et al., 2006, Siegrist and Doe, 2005, Wilson, 2005, Harris and Peifer, 2004, Yamashita et al., 2007, Yamashita et al., 2007, Ohlstein and Spradling, 2007, Barros et al., 2005, Caussinus and Gonzalez, 2005, Goshima et al., 2005, Rodrigues-Martins et al., 2007, Januschke et al., 2006, Morales-Mulia and Scholey, 2005, Mottier et al., 2008, Blagden and Glover, 2003, Zhang et al., 2007, Goshima et al., 2008, Tan et al., 2008, Wei et al., 2008, Trammell et al., 2008, Blachon et al., 2008, Colombié et al., 2008, Andersen and Tapon, 2008, Giansanti et al., 2008, Peel et al., 2007, Akbar et al., 2009, Mottier-Pavie and Megraw, 2009, Bouissou et al., 2009, Bucciarelli et al., 2009, Kracklauer et al., 2010)
γ-tubulin-1
γ tubulin 23C
γ-tubulin (23C)
γ-tubulin(23C)
γ-Tubulin at 23C
Secondary FlyBase IDs
  • FBgn0004176
  • FBgn0040117
hide References ( 254 )
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hide Recent research papers ( 5 )
Cheng et al., 2011, Development 138(5): 831--837
Asymmetric division of cyst stem cells in Drosophila testis is ensured by anaphase spindle repositioning. [FBrf0213009]
Brodu et al., 2010, Dev. Cell 18(5): 790--801
A developmentally regulated two-step process generates a noncentrosomal microtubule network in Drosophila tracheal cells. [FBrf0210851]
Kracklauer et al., 2010, J. Cell Sci. 123(Pt 16): 2763--2772
The Drosophila SUN protein Spag4 cooperates with the coiled-coil protein Yuri Gagarin to maintain association of the basal body and spermatid nucleus. [FBrf0211482]
Leatherman and Dinardo, 2010, Nat. Cell Biol. 12(8): 806--811
Germline self-renewal requires cyst stem cells and stat regulates niche adhesion in Drosophila testes. [FBrf0211422]
Müller et al., 2010, EMBO J. 29(19): 3344--3357
Proteomic and functional analysis of the mitotic Drosophila centrosome. [FBrf0212030]
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All reviews listed in FlyBase were published before 2010