FlyBase Gene Report: Dmel\Mp

General Information

Symbol

Dmel\Mp

Species

D. melanogaster

Name

Multiplexin

Annotation Symbol

CG42543

Feature Type

protein_coding_gene

FlyBase ID

FBgn0260660

Gene Model Status

Stock Availability

13 publicly available

Gene Summary

Multiplexin (Mp) encodes a Collagen XV/XVIII type protein that functions in motor axon pathfinding. It is required for normal calcium channel abundance, presynaptic calcium influx, and neurotransmitter release. [Date last reviewed: 2019-03-14] (FlyBase Gene Snapshot)

All Summaries

Gene Snapshot
Alliance
Auto summary
Gene Group
Interactive Fly

Also Known As

dmp

Key Links

Genomic Location

Cytogenetic map

Sequence location

3L:6,998,843..7,053,499 [+]

Recombination map

3-19

RefSeq locus

NT_037436 REGION:6998843..7053499

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse GBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

GO Summary Ribbons

Gene Ontology (GO) Annotations (8 terms)

Molecular Function (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

enables carbohydrate binding

inferred from sequence or structural similarity with FLYBASE:Lectin-galC1; FB:FBgn0016675

(Tanji et al., 2006)

Biological Process (6 terms)

Terms Based on Experimental Evidence (6 terms)

CV Term

Evidence

References

involved_in basement membrane organization

inferred from mutant phenotype

(Momota et al., 2013)

involved_in cardiac muscle atrophy

inferred from mutant phenotype

(Momota et al., 2013)

involved_in mitochondrion organization

inferred from mutant phenotype

(Momota et al., 2013)

involved_in motor neuron axon guidance

inferred from mutant phenotype

(Meyer and Moussian, 2009)

involved_in positive regulation of integrin-mediated signaling pathway

inferred from mutant phenotype

(Momota et al., 2013)

involved_in skeletal muscle atrophy

inferred from mutant phenotype

(Momota et al., 2013)

Terms Based on Predictions or Assertions (0 terms)

Cellular Component (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

part_of collagen trimer

inferred from sequence or structural similarity

(Hynes and Zhao, 2000)

Gene Group (FlyBase)

Protein Family (UniProt)

-

Protein Signatures (InterPro)

Summaries

Gene Snapshot

Multiplexin (Mp) encodes a Collagen XV/XVIII type protein that functions in motor axon pathfinding. It is required for normal calcium channel abundance, presynaptic calcium influx, and neurotransmitter release. [Date last reviewed: 2019-03-14]

Gene Group (FlyBase)

COLLAGENS -: Collagens are major structural components of extracellular matrix. (Adapted from FBrf0230242.)

Summary (Interactive Fly)

homolog of Collagen XV/XVIII, a matrix protein that can be proteolytically cleaved to release Endostatin, an antiangiogenesis signaling factor - required for normal calcium channel abundance, presynaptic calcium influx, and neurotransmitter release - functions in motor axon pathfinding

Interactive Fly

Gene Model and Products

Number of Transcripts

16

Number of Unique Polypeptides

16

Please see the JBrowse view of Dmel\Mp for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure New Section

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry M9ND55)

If you don't see the viewer to the right, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Comments on Gene Model

merge of CG33171 and CG8647

Gene model reviewed during 5.41

Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.50

Sequence Ontology: Class of Gene

gene_with_edited_transcript

(Graveley et al., 2011)

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

FBtr0301105

3906

1008

FBtr0301106

4140

778

FBtr0301107

4167

787

FBtr0301108

3956

1023

FBtr0301109

4245

813

FBtr0301110

2577

257

FBtr0301111

3103

579

FBtr0301113

3800

971

FBtr0301114

3938

1017

FBtr0301958

5126

792

FBtr0306638

3901

1013

FBtr0308094

1145

229

FBtr0309957

3974

1039

FBtr0339903

5162

804

FBtr0339904

4897

1022

FBtr0339905

4750

973

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

FBpp0290327

106.1

1008

5.71

FBpp0290328

80.8

778

8.68

FBpp0290329

81.9

787

8.33

FBpp0290330

108.1

1023

6.03

FBpp0290331

84.7

813

6.64

FBpp0290332

28.6

257

9.84

FBpp0290333

60.3

579

8.02

FBpp0290335

102.0

971

5.51

FBpp0290336

107.1

1017

5.52

FBpp0291170

82.6

792

8.50

FBpp0297593

106.8

1013

5.82

FBpp0300437

25.6

229

8.93

FBpp0301686

109.7

1039

5.72

FBpp0308935

83.7

804

8.51

FBpp0308936

107.8

1022

5.62

FBpp0308937

102.2

973

6.83

Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Mp using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Linkouts

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that the Fly Cell Atlas project found the gene expressed in that cell type. Darker colors mean that more cells of that cell type express the gene:

low

high

Colorless tiles indicate that there is no scRNAseq data for the gene in that cell type.

Colored tiles in ribbon indicate that expression data (RNA and/or protein) has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

Colored tiles in the ribbon indicate the average RNA expression level of the gene at the indicated stages:

low

high

as determined by RNA-seq (RPKM) using whole organism samples modENCODE, Brown et al., 2014. For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 16

embryonic/larval dorsal vessel

(Meyer and Moussian, 2009)

(Meyer and Moussian, 2009)

embryonic/larval aorta

(Meyer and Moussian, 2009)

embryonic stage 16 -- 17

embryonic/larval central nervous system

(Meyer and Moussian, 2009)

ventral nerve cord synaptic neuropil subdomain

(Meyer and Moussian, 2009)

first instar larval stage

embryonic/larval central nervous system

(Meyer and Moussian, 2009)

Additional Descriptive Data

Mp expression is observed starting at embryonic stage 16 in the dorsal vessel, aorta, filzkorper, central nervous system, especially in the neuropil region. No isoform-specific expression was observed.

(Meyer and Moussian, 2009)

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

immunolocalization

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 15

(Harpaz et al., 2013)

embryonic stage 16

embryonic/larval heart | restricted

(Harpaz et al., 2013)

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

day 7 of adulthood -- day 49 of adulthood

(Cammarato et al., 2011)

Additional Descriptive Data

In late embryos, Mp is specifically localized at the heart lumen, but not at the cardioblast basal domain. The Mp antibody does not detect staining at the aorta domain, nor in the pair of ostia cells. Importantly, Mp was only detected in cardioblasts at the stage of tube formation, and not in earlier stages.

(Harpaz et al., 2013)

Marker for

Subcellular Localization

CV Term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\Mp in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\Mp

View exonic expression by tissue for Dmel\Mp

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0260660

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

38769/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0260660

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0260660

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG33171

Flygut - An atlas of the Drosophila adult midgut

FBgn0260660

Images

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 13 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 14 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of Mp

Transgenic constructs containing regulatory region of Mp

Aberrations (Deficiencies and Duplications) ( 0 )

Inferred from experimentation ( 0 )

Inferred from location ( 0 )

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

Mp^GD6041

viable, with Scer\GAL4^Mef2.PR

viable, with Scer\GAL4^pnr-MD237

viable, with Scer\GAL4^tin.CΔ4

Mp^GD12529

Sterility

Allele

Other Phenotypes

Allele

abnormal body color, with Scer\GAL4^pnr-MD237

Mp^GD6041

abnormal developmental rate

abnormal flight | progressive

Mp^f07253

abnormal neuroanatomy | embryonic stage

abnormal neuroanatomy | embryonic stage, with Scer\GAL4^how-24B

Mp^{ES.UAS.Tag:SS(wg)}

abnormal neurophysiology | larval stage

Mp^f07253

abnormal neurophysiology | larval stage, with Scer\GAL4^egr-GAL4

Mp^JF02929

abnormal neurophysiology | larval stage, with Scer\GAL4^NP6293

Mp^JF02929

abnormal neurophysiology | larval stage, with Scer\GAL4^repo

Mp^JF02929

abnormal touch response | larval stage

Mp^f07253

visible, with Scer\GAL4^pnr-MD237

Mp^GD6041

visible (with Mp^f03008)

Mp^f07253

visible (with Mp^f07253)

Mp^f03008

Phenotype manifest in

Allele

adult heart, with Scer\GAL4^tin.cBa

Mp^UAS.cGa

basement membrane

Mp^f07253

Mp^f07253

chordotonal organ

Mp^f07253

embryonic/larval fat body

embryonic/larval neuromuscular junction | larval stage

Mp^f07253

embryonic/larval neuromuscular junction | larval stage, with Scer\GAL4^egr-GAL4

Mp^JF02929

embryonic/larval neuromuscular junction | larval stage, with Scer\GAL4^NP6293

Mp^JF02929

embryonic/larval neuromuscular junction | larval stage, with Scer\GAL4^repo

Mp^JF02929

indirect flight muscle cell

Mp^f07253

larval intersegmental nerve, with Scer\GAL4^how-24B

Mp^{ES.UAS.Tag:SS(wg)}

larval intersegmental nerve branch ISNb of A1-7

larval intersegmental nerve branch ISNb of A1-7, with Scer\GAL4^how-24B

Mp^{ES.UAS.Tag:SS(wg)}

mesothoracic tergum, with Scer\GAL4^pnr-MD237

Mp^GD6041

mitochondrial crista

Mp^f07253

mitochondrial matrix

Mp^f07253

mitochondrial outer membrane

Mp^f07253

Mp^f07253

presumptive embryonic/larval nervous system, with Scer\GAL4^how-24B

Mp^{ES.UAS.Tag:SS(wg)}

tergite (with Mp^f03008)

Mp^f07253

tergite (with Mp^f07253)

Mp^f03008

trichogen cell, with Scer\GAL4^pnr-MD237

Mp^GD6041

Mp^f07253

wing vein (with Mp^f03008)

Mp^f07253

wing vein (with Mp^f07253)

Mp^f03008

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v8.0)

Homo sapiens (Human) (18)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

8 of 15

Yes

Yes

6 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1

1 of 15

No

Yes

1

1 of 15

No

Yes

1 of 15

No

No

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

No

1 of 15

No

No

1 of 15

No

No

1 of 15

No

No

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

Model Organism Orthologs (via DIOPT v8.0)

Mus musculus (laboratory mouse) (16)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

9 of 15

Yes

Yes

7 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

No

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

No

1 of 15

No

No

1 of 15

No

No

1 of 15

No

No

1 of 15

No

Yes

1 of 15

No

Yes

Rattus norvegicus (Norway rat) (17)

4 of 13

Yes

Yes

3 of 13

No

Yes

Rnor\LOC100909752

3 of 13

No

Yes

Rnor\LOC108348074

2 of 13

No

Yes

1 of 13

No

Yes

1 of 13

No

Yes

1 of 13

No

Yes

1 of 13

No

No

1 of 13

No

Yes

1 of 13

No

Yes

1 of 13

No

No

1 of 13

No

No

1 of 13

No

No

1 of 13

No

No

1 of 13

No

Yes

1 of 13

No

Yes

1 of 13

No

No

Xenopus tropicalis (Western clawed frog) (2)

5 of 12

Yes

Yes

Xtro\LOC101731003

2 of 12

No

Yes

Danio rerio (Zebrafish) (26)

9 of 15

Yes

Yes

3 of 15

No

Yes

3 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

No

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

No

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

No

1 of 15

No

No

1 of 15

No

No

1 of 15

No

No

Drer\si:ch211-106n13.3

1 of 15

No

Yes

Drer\si:ch1073-291c23.1

1 of 15

No

Yes

Drer\si:dkey-225n22.4

1 of 15

No

Yes

1 of 15

No

No

1 of 15

No

Yes

Caenorhabditis elegans (Nematode, roundworm) (6)

6 of 15

Yes

Yes

1 of 15

No

Yes

1 of 15

No

No

1 of 15

No

Yes

1 of 15

No

Yes

1 of 15

No

Yes

Arabidopsis thaliana (thale-cress) (0)

No records found.

Saccharomyces cerevisiae (Brewer's yeast) (0)

No records found.

Schizosaccharomyces pombe (Fission yeast) (0)

No records found.

Other Organism Orthologs (via OrthoDB)

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v8.0)

Drosophila melanogaster (Fruit fly) (2)

Gene Symbol

Score

Source

Alignment

1 of 10

1 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 1 )

Allele

Disease

Evidence

References

model of cardiomyopathy

CEA

(Momota et al., 2013)

model of mitochondrial myopathy

CEA

(Momota et al., 2013)

model of myopathy

CEA

(Momota et al., 2013)

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

COL15A1; collagen type XV alpha 1 chain

8 of 15

COL18A1; collagen type XVIII alpha 1 chain

6 of 15

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

anti tag coimmunoprecipitation, anti tag western blot

(Csordás et al., 2020)

anti bait coimmunoprecipitation, western blot

(Harpaz et al., 2013)

Summary of Genetic Interactions

esyN Network Diagram

esyN Network Key:

Suppression

Enhancement

View in Interactions Browser

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

enhanceable

(Hauswirth et al., 2018)

External Data

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0260660

MIST (protein-protein) - An integrated Molecular Interaction Database

Mp

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

External Data

Linkouts

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Genomic Location and Detailed Mapping Data

Chromosome (arm)

3L

Recombination map

3-19

Cytogenetic map

Sequence location

3L:6,998,843..7,053,499 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

65D6-65E2

Limits computationally determined from genome sequence between P{lacW}l(3)L4060^L4060 and P{PZ}corn⁰⁴²⁰²

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

3-19

(FlyBase, 2016)

3-15.9

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (13)

Aberrations including deletions of this gene Aberrations including duplications of this gene

19062

w¹¹¹⁸; PBac{WH}Mp^f07253

25289

w¹¹¹⁸; Mi{ET1}Mp^MB08228

28299

y¹ v¹; P{TRiP.JF02929}attP2

52981

y¹ v¹; P{TRiP.HMJ21668}attP40

37696

y¹ w^*; Mi{MIC}Mp^MI04509

51075

y¹ w^*; Mi{MIC}Mp^MI08309

52149

y¹ w^*; Mi{MIC}Mp^MI09316

59471

y¹ w^*; Mi{MIC}Mp^MI14005

22993

y¹ w^67c23; Mi{ET1}Mp^MB01109

60567

y¹ w^*; Mi{PT-GFSTF.0}Mp^{MI09316-GFSTF.0}

v100846

P{KK103713}VIE-260B

v107319

P{KK108613}VIE-260B

More stocks available...

Genomic Clones (44)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (35)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0260660

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0260660

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

38769

Antibody Information

Laboratory Generated Antibodies

polyclonal

(Harpaz et al., 2013, Momota et al., 2011)

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: mp CG42543

(Meyer and Moussian, 2009)

Source for identity of: Mp mp

(FlyBase, 2009-)

Source for database merge of

Source for merge of: CG33171 CG8647

(FlyBase Genome Annotators, 2009)

Source for merge of: CG8645 CG14822

(FlyBase Genome Annotators, 2002-2003)

Additional comments

Annotations CG33171 and CG8647 merged as CG42543 in release 5.15 of the genome annotation.

(FlyBase Genome Annotators, 2009)

Annotations CG8645 and CG14822 merged as CG33171 in release 3 of the genome annotation.

(FlyBase Genome Annotators, 2002-2003)

Other Comments

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 111 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

38769

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

M9ND55

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

M9ND55

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0260660

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0260660

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

38769/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0260660

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0260660

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG33171

Flygut - An atlas of the Drosophila adult midgut

FBgn0260660

FlyMine - An integrated database for Drosophila genomics

FBgn0260660

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

38769

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC003787

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG42543

MARRVEL_MODEL - MARRVEL (model organism gene)

38769

modMine - A data warehouse for the modENCODE project

FBgn0260660

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0260660

DRSC - Results frm RNAi screens

FBgn0260660

Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution

Interactive Fly

MIST (protein-protein) - An integrated Molecular Interaction Database

Mp

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Synonyms and Secondary IDs (14)

Reported As

Symbol Synonym

CG14822

CG33171

(Hallier et al., 2015, Ashwal-Fluss et al., 2014, Cammarato et al., 2011, Grossman et al., 2011, Momota et al., 2011, Keleman et al., 2009.8.5, Meyer and Moussian, 2009, Perkins et al., 2009, Kwon et al., 2008, Tanji et al., 2006)

CG42543

(Hosono et al., 2015, Ni et al., 2010.12.1, FlyBase Genome Annotators, 2009, Gilliland et al., 2009)

CG8645

(Sano et al., 2005)

CG8647

(Japanese National Institute of Genetics, 2012.5.21, Momota et al., 2011, Keleman et al., 2009.8.5, Meyer and Moussian, 2009)

COL18A1

(Grossman et al., 2011)

CT14872

(Hynes and Zhao, 2000)

Dmp

(Meyer and Moussian, 2009)

Mp

(Anqueira-González et al., 2021, Pang et al., 2021, Parra and Johnston, 2020, Blice-Baum et al., 2019, Harbison et al., 2019, Williams-Simon et al., 2019, Wittes and Schüpbach, 2019, Hughes and Jacobs, 2017, Transgenic RNAi Project members, 2017-, Ma et al., 2016, Gene Disruption Project members, 2015-, Harpaz et al., 2013)

dmp

(Hauswirth et al., 2018, Harris et al., 2015, Wang et al., 2014)

mp

(Deshpande et al., 2019, Harpaz et al., 2013, Momota et al., 2013, Kaushik et al., 2012, Momota et al., 2011)

multiplexin

(Frank et al., 2020)

Name Synonyms

CG33171

CG8647

Collagen-like

(Sano et al., 2005)

Multiplexin

(Csordás et al., 2020, Ocorr et al., 2014, Harpaz et al., 2013, Momota et al., 2013)

multiplexin

(Davis and Müller, 2015, Hallier et al., 2015, Harris et al., 2015, Wang et al., 2014, Meyer and Moussian, 2009)

Secondary FlyBase IDs

FBgn0035731
FBgn0035732
FBgn0053171
FBgn0035729

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

References (82)