General Information Symbol Dmel\ Gprk1Species D. melanogaster Name G protein-coupled receptor kinase 1 Annotation symbol CG40129 Feature type protein_coding_gene FlyBase ID FBgn0260798 Gene Model Status Current Stock availability 4 publicly
available Also Known As RK, Gprk-1 Genomic Location Chromosome (arm) 2R Recombination map 2-[55.1] Cytogenetic map 41B3-41C2 Sequence location 2R:209,942..358,565 [-]
Genomic Maps
Summary Information Automatically generated summary
See sections below for more information The gene
G protein-coupled receptor kinase 1 is referred to in FlyBase by the symbol
Dmel\Gprk1 (CG40129, FBgn0260798). It is a protein_coding_gene from
Drosophila melanogaster . There is experimental evidence that it has the
molecular function : G-protein coupled receptor binding; ATP binding; phosphatidylinositol binding; rhodopsin kinase activity. There is experimental evidence that it is involved in the
biological process : protein phosphorylation; imaginal disc-derived wing vein specification; phototransduction, visible light; metarhodopsin inactivation.
7 alleles are reported . The
phenotype of these alleles is annotated with: wing. It has
2 annotated transcripts and
2 annotated polypeptides .
Protein features are: AGC-kinase, C-terminal; GPCR kinase; Pleckstrin homology domain; Pleckstrin homology-like domain; Protein kinase, ATP binding site; Protein kinase, catalytic domain; Protein kinase-like domain; Regulator of G protein signalling; Regulator of G protein signalling superfamily; Serine/threonine- / dual specificity protein kinase, catalytic domain; Serine/threonine-protein kinase, active site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 and 12-24 hour embryonic stages, at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult central nervous system. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1630514_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of Gprk1. Gene sequence location is
2R:209942..358565 .
User Contributed Data
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FB2013_03
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Detailed Mapping Data
FlyBase Computed Cytological Location
Experimentally Determined Cytological Location
41B3-41C2
(determined by in situ hybridisation)
Experimentally Determined Recombination Data
Location Left of (cM) Right of (cM) Notes Gene Model & Products Comments on Gene
Model Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.47
Transcript Data Annotated Transcripts Additional Transcript Data
& Comments Reported size (kB) Comments External Data Crossreferences
Polypeptide Data Annotated
Polypeptides Additional Polypeptide
Data & Comments Reported size (kDa) 700 (aa); 80 (kD predicted)
Comments External Data Linkouts Crossreferences
domains - A database of protein families, domains, and functional sites
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank UniProtKB/Swiss-Prot UniProtKB/TrEMBL Mapped Features Mapped Features have been reorganized, please
see this article for details. Additional mapped features and mutations can
be found on GBrowse or related reports. External Data Linkouts Crossreferences Expression Data Transcript Expression
Additional Descriptive Data
Marker for Subcellular Localization CV Term Polypeptide Expression
Additional Descriptive Data
Gprk1 protein is found at all stages by western blot analysis. Immunohistochemical staining shows that it is ubiquitous in the adult fly.
Marker for Subcellular Localization (GO Cellular Component) Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference
FlyAtlas Anatomy Microarray
Linear, scaled to maximum expression level
Tissue
Expression Level
Larval Central Nervous System
735.7
Larval Midgut
143.3
Larval Hindgut
261.5
Larval Malpighian Tubules
202.4
Larval Fat Body
144.9
Larval Salivary Gland
177.2
Larval Trachea
267.55
Larval Carcass
195.975
Adult Head
355.1
Adult Eye
337.025
Adult Brain
636.1
Adult Thoracic-Abdominal Ganglion
586.5
Adult Crop
337.7
Adult Midgut
106
Adult Hindgut
215.1
Adult Malpighian Tubules
121.8
Adult Fat Body
140.3
Adult Salivary Gland
218.4
Adult Heart
157.225
Adult VirginFemale Spermatheca
142.8
Adult InseminatedFemale Spermatheca
172.2
Adult Ovary
398.5
Adult Testis
53.1
Adult Male Accessory Gland
188.9
Adult Carcass
137.2
Expression Level Scale
None
Low
Moderate
High
Linear, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
(735.7)
Larval Midgut
143.3
Larval Hindgut
261.5
Larval Malpighian Tubules
202.4
Larval Fat Body
144.9
Larval Salivary Gland
177.2
Larval Trachea
267.55
Larval Carcass
195.975
Adult Head
355.1
Adult Eye
337.025
Adult Brain
(636.1)
Adult Thoracic-Abdominal Ganglion
(586.5)
Adult Crop
337.7
Adult Midgut
106
Adult Hindgut
215.1
Adult Malpighian Tubules
121.8
Adult Fat Body
140.3
Adult Salivary Gland
218.4
Adult Heart
157.225
Adult VirginFemale Spermatheca
142.8
Adult InseminatedFemale Spermatheca
172.2
Adult Ovary
398.5
Adult Testis
53.1
Adult Male Accessory Gland
188.9
Adult Carcass
137.2
Expression Level Scale
None
Low
Moderate
High
Linear, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
735.7
Larval Midgut
143.3
Larval Hindgut
261.5
Larval Malpighian Tubules
202.4
Larval Fat Body
144.9
Larval Salivary Gland
177.2
Larval Trachea
267.55
Larval Carcass
195.975
Adult Head
355.1
Adult Eye
337.025
Adult Brain
636.1
Adult Thoracic-Abdominal Ganglion
586.5
Adult Crop
337.7
Adult Midgut
106
Adult Hindgut
215.1
Adult Malpighian Tubules
121.8
Adult Fat Body
140.3
Adult Salivary Gland
218.4
Adult Heart
157.225
Adult VirginFemale Spermatheca
142.8
Adult InseminatedFemale Spermatheca
172.2
Adult Ovary
398.5
Adult Testis
53.1
Adult Male Accessory Gland
188.9
Adult Carcass
137.2
Expression Level Scale
None
Low
Moderate
High
Very high
Linear, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
735.7
Larval Midgut
143.3
Larval Hindgut
261.5
Larval Malpighian Tubules
202.4
Larval Fat Body
144.9
Larval Salivary Gland
177.2
Larval Trachea
267.55
Larval Carcass
195.975
Adult Head
355.1
Adult Eye
337.025
Adult Brain
636.1
Adult Thoracic-Abdominal Ganglion
586.5
Adult Crop
337.7
Adult Midgut
106
Adult Hindgut
215.1
Adult Malpighian Tubules
121.8
Adult Fat Body
140.3
Adult Salivary Gland
218.4
Adult Heart
157.225
Adult VirginFemale Spermatheca
142.8
Adult InseminatedFemale Spermatheca
172.2
Adult Ovary
398.5
Adult Testis
53.1
Adult Male Accessory Gland
188.9
Adult Carcass
137.2
Expression Level Scale
Very high
log, scaled to maximum expression level
Tissue
Expression Level
Larval Central Nervous System
735.7
Larval Midgut
143.3
Larval Hindgut
261.5
Larval Malpighian Tubules
202.4
Larval Fat Body
144.9
Larval Salivary Gland
177.2
Larval Trachea
267.55
Larval Carcass
195.975
Adult Head
355.1
Adult Eye
337.025
Adult Brain
636.1
Adult Thoracic-Abdominal Ganglion
586.5
Adult Crop
337.7
Adult Midgut
106
Adult Hindgut
215.1
Adult Malpighian Tubules
121.8
Adult Fat Body
140.3
Adult Salivary Gland
218.4
Adult Heart
157.225
Adult VirginFemale Spermatheca
142.8
Adult InseminatedFemale Spermatheca
172.2
Adult Ovary
398.5
Adult Testis
53.1
Adult Male Accessory Gland
188.9
Adult Carcass
137.2
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
735.7
Larval Midgut
143.3
Larval Hindgut
261.5
Larval Malpighian Tubules
202.4
Larval Fat Body
144.9
Larval Salivary Gland
177.2
Larval Trachea
267.55
Larval Carcass
195.975
Adult Head
355.1
Adult Eye
337.025
Adult Brain
636.1
Adult Thoracic-Abdominal Ganglion
586.5
Adult Crop
337.7
Adult Midgut
106
Adult Hindgut
215.1
Adult Malpighian Tubules
121.8
Adult Fat Body
140.3
Adult Salivary Gland
218.4
Adult Heart
157.225
Adult VirginFemale Spermatheca
142.8
Adult InseminatedFemale Spermatheca
172.2
Adult Ovary
398.5
Adult Testis
53.1
Adult Male Accessory Gland
188.9
Adult Carcass
137.2
Expression Level Scale
None
Low
Moderate
High
log, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
735.7
Larval Midgut
143.3
Larval Hindgut
261.5
Larval Malpighian Tubules
202.4
Larval Fat Body
144.9
Larval Salivary Gland
177.2
Larval Trachea
267.55
Larval Carcass
195.975
Adult Head
355.1
Adult Eye
337.025
Adult Brain
636.1
Adult Thoracic-Abdominal Ganglion
586.5
Adult Crop
337.7
Adult Midgut
106
Adult Hindgut
215.1
Adult Malpighian Tubules
121.8
Adult Fat Body
140.3
Adult Salivary Gland
218.4
Adult Heart
157.225
Adult VirginFemale Spermatheca
142.8
Adult InseminatedFemale Spermatheca
172.2
Adult Ovary
398.5
Adult Testis
53.1
Adult Male Accessory Gland
188.9
Adult Carcass
137.2
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
735.7
Larval Midgut
143.3
Larval Hindgut
261.5
Larval Malpighian Tubules
202.4
Larval Fat Body
144.9
Larval Salivary Gland
177.2
Larval Trachea
267.55
Larval Carcass
195.975
Adult Head
355.1
Adult Eye
337.025
Adult Brain
636.1
Adult Thoracic-Abdominal Ganglion
586.5
Adult Crop
337.7
Adult Midgut
106
Adult Hindgut
215.1
Adult Malpighian Tubules
121.8
Adult Fat Body
140.3
Adult Salivary Gland
218.4
Adult Heart
157.225
Adult VirginFemale Spermatheca
142.8
Adult InseminatedFemale Spermatheca
172.2
Adult Ovary
398.5
Adult Testis
53.1
Adult Male Accessory Gland
188.9
Adult Carcass
137.2
Expression Level Scale
None
Low
Moderate
High
Very high
Heatmap
Tissue
Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass
FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level
Tissue
Adult Expression Level
NA
Head
355.1
NA
Eye
337.025
NA
Brain
636.1
735.7
Central Nervous System
NA
NA
Thoracic-Abdominal Ganglion
586.5
NA
Crop
337.7
143.3
Midgut
106
261.5
Hindgut
215.1
202.4
Malpighian Tubules
121.8
144.9
Fat Body
140.3
177.2
Salivary Gland
218.4
NA
Heart
157.225
267.55
Trachea
NA
NA
VirginFemale Spermatheca
142.8
NA
InseminatedFemale Spermatheca
172.2
NA
Ovary
398.5
NA
Testis
53.1
NA
Male Accessory Gland
188.9
195.975
Carcass
137.2
modENCODE Anatomy RNA-Seq
Linear, scaled to maximum expression level
Tissue
Expression Level
imaginal disc, larvae L3 wandering
38
central nervous system, larvae L3
77
central nervous system, pupae P8
98
head, virgin 1-day female
37
head, virgin 4-day female
28
head, virgin 20-day female
19
head, mated 1-day female
25
head, mated 4-day female
32
head, mated 20-day female
20
head, mated 1-day male
36
head, mated 4-day male
61
head, mated 20-day male
47
salivary gland, larvae L3 wandering
12
salivary gland, white prepupae
17
digestive system, larvae L3 wandering
17
digestive system, 1-day adult
16
digestive system, 4-day adult
18
digestive system, 20-day adult
12
fat body, larvae L3 wandering
5
fat body, white prepupae
19
fat body, pupae P8
25
carcass, larvae L3 wandering
29
carcass, 1-day adult
14
carcass, 4-day adult
20
carcass, 20-day adult
16
ovary, virgin 4-day female
73
ovary, mated 4-day female
47
testis, mated 4-day male
4
accessory gland, mated 4-day male
6
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Moderate expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
(38)
central nervous system, larvae L3
(77)
central nervous system, pupae P8
(98)
head, virgin 1-day female
(37)
head, virgin 4-day female
(28)
head, virgin 20-day female
19
head, mated 1-day female
25
head, mated 4-day female
(32)
head, mated 20-day female
20
head, mated 1-day male
(36)
head, mated 4-day male
(61)
head, mated 20-day male
(47)
salivary gland, larvae L3 wandering
12
salivary gland, white prepupae
17
digestive system, larvae L3 wandering
17
digestive system, 1-day adult
16
digestive system, 4-day adult
18
digestive system, 20-day adult
12
fat body, larvae L3 wandering
5
fat body, white prepupae
19
fat body, pupae P8
25
carcass, larvae L3 wandering
(29)
carcass, 1-day adult
14
carcass, 4-day adult
20
carcass, 20-day adult
16
ovary, virgin 4-day female
(73)
ovary, mated 4-day female
(47)
testis, mated 4-day male
4
accessory gland, mated 4-day male
6
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
38
central nervous system, larvae L3
77
central nervous system, pupae P8
98
head, virgin 1-day female
37
head, virgin 4-day female
28
head, virgin 20-day female
19
head, mated 1-day female
25
head, mated 4-day female
32
head, mated 20-day female
20
head, mated 1-day male
36
head, mated 4-day male
61
head, mated 20-day male
47
salivary gland, larvae L3 wandering
12
salivary gland, white prepupae
17
digestive system, larvae L3 wandering
17
digestive system, 1-day adult
16
digestive system, 4-day adult
18
digestive system, 20-day adult
12
fat body, larvae L3 wandering
5
fat body, white prepupae
19
fat body, pupae P8
25
carcass, larvae L3 wandering
29
carcass, 1-day adult
14
carcass, 4-day adult
20
carcass, 20-day adult
16
ovary, virgin 4-day female
73
ovary, mated 4-day female
47
testis, mated 4-day male
4
accessory gland, mated 4-day male
6
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
38
central nervous system, larvae L3
77
central nervous system, pupae P8
98
head, virgin 1-day female
37
head, virgin 4-day female
28
head, virgin 20-day female
19
head, mated 1-day female
25
head, mated 4-day female
32
head, mated 20-day female
20
head, mated 1-day male
36
head, mated 4-day male
61
head, mated 20-day male
47
salivary gland, larvae L3 wandering
12
salivary gland, white prepupae
17
digestive system, larvae L3 wandering
17
digestive system, 1-day adult
16
digestive system, 4-day adult
18
digestive system, 20-day adult
12
fat body, larvae L3 wandering
5
fat body, white prepupae
19
fat body, pupae P8
25
carcass, larvae L3 wandering
29
carcass, 1-day adult
14
carcass, 4-day adult
20
carcass, 20-day adult
16
ovary, virgin 4-day female
73
ovary, mated 4-day female
47
testis, mated 4-day male
4
accessory gland, mated 4-day male
6
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Tissue
Expression Level
imaginal disc, larvae L3 wandering
38
central nervous system, larvae L3
77
central nervous system, pupae P8
98
head, virgin 1-day female
37
head, virgin 4-day female
28
head, virgin 20-day female
19
head, mated 1-day female
25
head, mated 4-day female
32
head, mated 20-day female
20
head, mated 1-day male
36
head, mated 4-day male
61
head, mated 20-day male
47
salivary gland, larvae L3 wandering
12
salivary gland, white prepupae
17
digestive system, larvae L3 wandering
17
digestive system, 1-day adult
16
digestive system, 4-day adult
18
digestive system, 20-day adult
12
fat body, larvae L3 wandering
5
fat body, white prepupae
19
fat body, pupae P8
25
carcass, larvae L3 wandering
29
carcass, 1-day adult
14
carcass, 4-day adult
20
carcass, 20-day adult
16
ovary, virgin 4-day female
73
ovary, mated 4-day female
47
testis, mated 4-day male
4
accessory gland, mated 4-day male
6
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
(38)
central nervous system, larvae L3
(77)
central nervous system, pupae P8
(98)
head, virgin 1-day female
(37)
head, virgin 4-day female
28
head, virgin 20-day female
19
head, mated 1-day female
25
head, mated 4-day female
32
head, mated 20-day female
20
head, mated 1-day male
(36)
head, mated 4-day male
(61)
head, mated 20-day male
(47)
salivary gland, larvae L3 wandering
12
salivary gland, white prepupae
17
digestive system, larvae L3 wandering
17
digestive system, 1-day adult
16
digestive system, 4-day adult
18
digestive system, 20-day adult
12
fat body, larvae L3 wandering
5
fat body, white prepupae
19
fat body, pupae P8
25
carcass, larvae L3 wandering
29
carcass, 1-day adult
14
carcass, 4-day adult
20
carcass, 20-day adult
16
ovary, virgin 4-day female
(73)
ovary, mated 4-day female
(47)
testis, mated 4-day male
4
accessory gland, mated 4-day male
6
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
38
central nervous system, larvae L3
77
central nervous system, pupae P8
98
head, virgin 1-day female
37
head, virgin 4-day female
28
head, virgin 20-day female
19
head, mated 1-day female
25
head, mated 4-day female
32
head, mated 20-day female
20
head, mated 1-day male
36
head, mated 4-day male
61
head, mated 20-day male
47
salivary gland, larvae L3 wandering
12
salivary gland, white prepupae
17
digestive system, larvae L3 wandering
17
digestive system, 1-day adult
16
digestive system, 4-day adult
18
digestive system, 20-day adult
12
fat body, larvae L3 wandering
5
fat body, white prepupae
19
fat body, pupae P8
25
carcass, larvae L3 wandering
29
carcass, 1-day adult
14
carcass, 4-day adult
20
carcass, 20-day adult
16
ovary, virgin 4-day female
73
ovary, mated 4-day female
47
testis, mated 4-day male
4
accessory gland, mated 4-day male
6
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
38
central nervous system, larvae L3
77
central nervous system, pupae P8
98
head, virgin 1-day female
37
head, virgin 4-day female
28
head, virgin 20-day female
19
head, mated 1-day female
25
head, mated 4-day female
32
head, mated 20-day female
20
head, mated 1-day male
36
head, mated 4-day male
61
head, mated 20-day male
47
salivary gland, larvae L3 wandering
12
salivary gland, white prepupae
17
digestive system, larvae L3 wandering
17
digestive system, 1-day adult
16
digestive system, 4-day adult
18
digestive system, 20-day adult
12
fat body, larvae L3 wandering
5
fat body, white prepupae
19
fat body, pupae P8
25
carcass, larvae L3 wandering
29
carcass, 1-day adult
14
carcass, 4-day adult
20
carcass, 20-day adult
16
ovary, virgin 4-day female
73
ovary, mated 4-day female
47
testis, mated 4-day male
4
accessory gland, mated 4-day male
6
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Tissue
Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male
modENCODE Development RNA-Seq
Linear, scaled to maximum expression level
Developmental Stage
Expression Level
embryo 00-02hr
13
embryo 02-04hr
19
embryo 04-06hr
11
embryo 06-08hr
7
embryo 08-10hr
11
embryo 10-12hr
14
embryo 12-14hr
25
embryo 14-16hr
6
embryo 16-18hr
14
embryo 18-20hr
7
embryo 20-22hr
10
embryo 22-24hr
19
larva L1
4
larva L2
6
larva L3 12hr old
3
larva L3 puffstage 1-2
6
larva L3 puffstage 3-6
8
larva L3 puffstage 7-9
16
white prepupae new
17
white prepupae 12hr
21
white prepupae 24hr
21
pupae 2d postWPP
21
pupae 3d postWPP
13
pupae 4d postWPP
3
adult male 01day
7
adult male 05day
5
adult male 30day
3
adult female 01day
3
adult female 05day
12
adult female 30day
9
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
13
embryo 02-04hr
19
embryo 04-06hr
11
embryo 06-08hr
7
embryo 08-10hr
11
embryo 10-12hr
14
embryo 12-14hr
25
embryo 14-16hr
6
embryo 16-18hr
14
embryo 18-20hr
7
embryo 20-22hr
10
embryo 22-24hr
19
larva L1
4
larva L2
6
larva L3 12hr old
3
larva L3 puffstage 1-2
6
larva L3 puffstage 3-6
8
larva L3 puffstage 7-9
16
white prepupae new
17
white prepupae 12hr
21
white prepupae 24hr
21
pupae 2d postWPP
21
pupae 3d postWPP
13
pupae 4d postWPP
3
adult male 01day
7
adult male 05day
5
adult male 30day
3
adult female 01day
3
adult female 05day
12
adult female 30day
9
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
13
embryo 02-04hr
19
embryo 04-06hr
11
embryo 06-08hr
7
embryo 08-10hr
11
embryo 10-12hr
14
embryo 12-14hr
25
embryo 14-16hr
6
embryo 16-18hr
14
embryo 18-20hr
7
embryo 20-22hr
10
embryo 22-24hr
19
larva L1
4
larva L2
6
larva L3 12hr old
3
larva L3 puffstage 1-2
6
larva L3 puffstage 3-6
8
larva L3 puffstage 7-9
16
white prepupae new
17
white prepupae 12hr
21
white prepupae 24hr
21
pupae 2d postWPP
21
pupae 3d postWPP
13
pupae 4d postWPP
3
adult male 01day
7
adult male 05day
5
adult male 30day
3
adult female 01day
3
adult female 05day
12
adult female 30day
9
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
13
embryo 02-04hr
19
embryo 04-06hr
11
embryo 06-08hr
7
embryo 08-10hr
11
embryo 10-12hr
14
embryo 12-14hr
25
embryo 14-16hr
6
embryo 16-18hr
14
embryo 18-20hr
7
embryo 20-22hr
10
embryo 22-24hr
19
larva L1
4
larva L2
6
larva L3 12hr old
3
larva L3 puffstage 1-2
6
larva L3 puffstage 3-6
8
larva L3 puffstage 7-9
16
white prepupae new
17
white prepupae 12hr
21
white prepupae 24hr
21
pupae 2d postWPP
21
pupae 3d postWPP
13
pupae 4d postWPP
3
adult male 01day
7
adult male 05day
5
adult male 30day
3
adult female 01day
3
adult female 05day
12
adult female 30day
9
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Developmental Stage
Expression Level
embryo 00-02hr
13
embryo 02-04hr
19
embryo 04-06hr
11
embryo 06-08hr
7
embryo 08-10hr
11
embryo 10-12hr
14
embryo 12-14hr
25
embryo 14-16hr
6
embryo 16-18hr
14
embryo 18-20hr
7
embryo 20-22hr
10
embryo 22-24hr
19
larva L1
4
larva L2
6
larva L3 12hr old
3
larva L3 puffstage 1-2
6
larva L3 puffstage 3-6
8
larva L3 puffstage 7-9
16
white prepupae new
17
white prepupae 12hr
21
white prepupae 24hr
21
pupae 2d postWPP
21
pupae 3d postWPP
13
pupae 4d postWPP
3
adult male 01day
7
adult male 05day
5
adult male 30day
3
adult female 01day
3
adult female 05day
12
adult female 30day
9
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
13
embryo 02-04hr
19
embryo 04-06hr
11
embryo 06-08hr
7
embryo 08-10hr
11
embryo 10-12hr
14
embryo 12-14hr
25
embryo 14-16hr
6
embryo 16-18hr
14
embryo 18-20hr
7
embryo 20-22hr
10
embryo 22-24hr
19
larva L1
4
larva L2
6
larva L3 12hr old
3
larva L3 puffstage 1-2
6
larva L3 puffstage 3-6
8
larva L3 puffstage 7-9
16
white prepupae new
17
white prepupae 12hr
21
white prepupae 24hr
21
pupae 2d postWPP
21
pupae 3d postWPP
13
pupae 4d postWPP
3
adult male 01day
7
adult male 05day
5
adult male 30day
3
adult female 01day
3
adult female 05day
12
adult female 30day
9
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
13
embryo 02-04hr
19
embryo 04-06hr
11
embryo 06-08hr
7
embryo 08-10hr
11
embryo 10-12hr
14
embryo 12-14hr
25
embryo 14-16hr
6
embryo 16-18hr
14
embryo 18-20hr
7
embryo 20-22hr
10
embryo 22-24hr
19
larva L1
4
larva L2
6
larva L3 12hr old
3
larva L3 puffstage 1-2
6
larva L3 puffstage 3-6
8
larva L3 puffstage 7-9
16
white prepupae new
17
white prepupae 12hr
21
white prepupae 24hr
21
pupae 2d postWPP
21
pupae 3d postWPP
13
pupae 4d postWPP
3
adult male 01day
7
adult male 05day
5
adult male 30day
3
adult female 01day
3
adult female 05day
12
adult female 30day
9
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
13
embryo 02-04hr
19
embryo 04-06hr
11
embryo 06-08hr
7
embryo 08-10hr
11
embryo 10-12hr
14
embryo 12-14hr
25
embryo 14-16hr
6
embryo 16-18hr
14
embryo 18-20hr
7
embryo 20-22hr
10
embryo 22-24hr
19
larva L1
4
larva L2
6
larva L3 12hr old
3
larva L3 puffstage 1-2
6
larva L3 puffstage 3-6
8
larva L3 puffstage 7-9
16
white prepupae new
17
white prepupae 12hr
21
white prepupae 24hr
21
pupae 2d postWPP
21
pupae 3d postWPP
13
pupae 4d postWPP
3
adult male 01day
7
adult male 05day
5
adult male 30day
3
adult female 01day
3
adult female 05day
12
adult female 30day
9
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Developmental Stage
Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day
modENCODE Cell Lines RNA-Seq
Linear, scaled to maximum expression level
Cell Line
Expression Level
Schneider line 2 S2R+
71
Schneider line 2 Sg4
51
embryonic 1182-4H
23
embryonic GM2
100
embryonic Kc167
32
embryonic S1
11
embryonic S3
67
leg disc CME L1
27
wing disc CME-W2
85
wing disc ML-DmD8
33
wing disc ML-DmD9
21
wing disc ML-DmD16-c3
33
wing disc ML-DmD21
52
wing disc ML-DmD32
42
haltere disc ML-DmD17-c3
20
eye-antennal disc ML-DmD11
21
antennal disc ML-DmD20-c5
45
mixed discs ML-DmD4-c1
32
CNS ML-DmBG1-c1
26
CNS ML-DmBG2-c2
31
tumorous blood cells mbn2
98
ovary fGS/OSS
15
ovary OSC
48
ovary OSS
21
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Moderate expression
Cell Line
Expression Level
Schneider line 2 S2R+
(71)
Schneider line 2 Sg4
(51)
embryonic 1182-4H
23
embryonic GM2
(100)
embryonic Kc167
(32)
embryonic S1
11
embryonic S3
(67)
leg disc CME L1
(27)
wing disc CME-W2
(85)
wing disc ML-DmD8
(33)
wing disc ML-DmD9
21
wing disc ML-DmD16-c3
(33)
wing disc ML-DmD21
(52)
wing disc ML-DmD32
(42)
haltere disc ML-DmD17-c3
20
eye-antennal disc ML-DmD11
21
antennal disc ML-DmD20-c5
(45)
mixed discs ML-DmD4-c1
(32)
CNS ML-DmBG1-c1
26
CNS ML-DmBG2-c2
(31)
tumorous blood cells mbn2
(98)
ovary fGS/OSS
15
ovary OSC
(48)
ovary OSS
21
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Cell Line
Expression Level
Schneider line 2 S2R+
71
Schneider line 2 Sg4
51
embryonic 1182-4H
23
embryonic GM2
100
embryonic Kc167
32
embryonic S1
11
embryonic S3
67
leg disc CME L1
27
wing disc CME-W2
85
wing disc ML-DmD8
33
wing disc ML-DmD9
21
wing disc ML-DmD16-c3
33
wing disc ML-DmD21
52
wing disc ML-DmD32
42
haltere disc ML-DmD17-c3
20
eye-antennal disc ML-DmD11
21
antennal disc ML-DmD20-c5
45
mixed discs ML-DmD4-c1
32
CNS ML-DmBG1-c1
26
CNS ML-DmBG2-c2
31
tumorous blood cells mbn2
98
ovary fGS/OSS
15
ovary OSC
48
ovary OSS
21
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Cell Line
Expression Level
Schneider line 2 S2R+
71
Schneider line 2 Sg4
51
embryonic 1182-4H
23
embryonic GM2
100
embryonic Kc167
32
embryonic S1
11
embryonic S3
67
leg disc CME L1
27
wing disc CME-W2
85
wing disc ML-DmD8
33
wing disc ML-DmD9
21
wing disc ML-DmD16-c3
33
wing disc ML-DmD21
52
wing disc ML-DmD32
42
haltere disc ML-DmD17-c3
20
eye-antennal disc ML-DmD11
21
antennal disc ML-DmD20-c5
45
mixed discs ML-DmD4-c1
32
CNS ML-DmBG1-c1
26
CNS ML-DmBG2-c2
31
tumorous blood cells mbn2
98
ovary fGS/OSS
15
ovary OSC
48
ovary OSS
21
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Cell Line
Expression Level
Schneider line 2 S2R+
71
Schneider line 2 Sg4
51
embryonic 1182-4H
23
embryonic GM2
100
embryonic Kc167
32
embryonic S1
11
embryonic S3
67
leg disc CME L1
27
wing disc CME-W2
85
wing disc ML-DmD8
33
wing disc ML-DmD9
21
wing disc ML-DmD16-c3
33
wing disc ML-DmD21
52
wing disc ML-DmD32
42
haltere disc ML-DmD17-c3
20
eye-antennal disc ML-DmD11
21
antennal disc ML-DmD20-c5
45
mixed discs ML-DmD4-c1
32
CNS ML-DmBG1-c1
26
CNS ML-DmBG2-c2
31
tumorous blood cells mbn2
98
ovary fGS/OSS
15
ovary OSC
48
ovary OSS
21
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Cell Line
Expression Level
Schneider line 2 S2R+
(71)
Schneider line 2 Sg4
(51)
embryonic 1182-4H
23
embryonic GM2
(100)
embryonic Kc167
32
embryonic S1
11
embryonic S3
(67)
leg disc CME L1
27
wing disc CME-W2
(85)
wing disc ML-DmD8
(33)
wing disc ML-DmD9
21
wing disc ML-DmD16-c3
(33)
wing disc ML-DmD21
(52)
wing disc ML-DmD32
(42)
haltere disc ML-DmD17-c3
20
eye-antennal disc ML-DmD11
21
antennal disc ML-DmD20-c5
(45)
mixed discs ML-DmD4-c1
32
CNS ML-DmBG1-c1
26
CNS ML-DmBG2-c2
31
tumorous blood cells mbn2
(98)
ovary fGS/OSS
15
ovary OSC
(48)
ovary OSS
21
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Cell Line
Expression Level
Schneider line 2 S2R+
71
Schneider line 2 Sg4
51
embryonic 1182-4H
23
embryonic GM2
100
embryonic Kc167
32
embryonic S1
11
embryonic S3
67
leg disc CME L1
27
wing disc CME-W2
85
wing disc ML-DmD8
33
wing disc ML-DmD9
21
wing disc ML-DmD16-c3
33
wing disc ML-DmD21
52
wing disc ML-DmD32
42
haltere disc ML-DmD17-c3
20
eye-antennal disc ML-DmD11
21
antennal disc ML-DmD20-c5
45
mixed discs ML-DmD4-c1
32
CNS ML-DmBG1-c1
26
CNS ML-DmBG2-c2
31
tumorous blood cells mbn2
98
ovary fGS/OSS
15
ovary OSC
48
ovary OSS
21
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Cell Line
Expression Level
Schneider line 2 S2R+
71
Schneider line 2 Sg4
51
embryonic 1182-4H
23
embryonic GM2
100
embryonic Kc167
32
embryonic S1
11
embryonic S3
67
leg disc CME L1
27
wing disc CME-W2
85
wing disc ML-DmD8
33
wing disc ML-DmD9
21
wing disc ML-DmD16-c3
33
wing disc ML-DmD21
52
wing disc ML-DmD32
42
haltere disc ML-DmD17-c3
20
eye-antennal disc ML-DmD11
21
antennal disc ML-DmD20-c5
45
mixed discs ML-DmD4-c1
32
CNS ML-DmBG1-c1
26
CNS ML-DmBG2-c2
31
tumorous blood cells mbn2
98
ovary fGS/OSS
15
ovary OSC
48
ovary OSS
21
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Cell Line
Expression Level
Schneider line 2 S2R+
Schneider line 2 Sg4
embryonic 1182-4H
embryonic GM2
embryonic Kc167
embryonic S1
embryonic S3
leg disc CME L1
wing disc CME-W2
wing disc ML-DmD8
wing disc ML-DmD9
wing disc ML-DmD16-c3
wing disc ML-DmD21
wing disc ML-DmD32
haltere disc ML-DmD17-c3
eye-antennal disc ML-DmD11
antennal disc ML-DmD20-c5
mixed discs ML-DmD4-c1
CNS ML-DmBG1-c1
CNS ML-DmBG2-c2
tumorous blood cells mbn2
ovary fGS/OSS
ovary OSC
ovary OSS
modENCODE Treatments RNA-Seq
Linear, scaled to maximum expression level
Treatment
Expression Level
extended cold, 4-day adult
4
cold shock, 4-day adult
4
heat shock, 4-day adult
11
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
37
Cadmium 50 mM 48 hrs, 4-day adult
18
Cadmium 100 mM 48 hrs, 4-day adult
45
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
70
Zinc 5 mM 12 hrs, larvae L3
2
Zinc 4.5 mM 48 hrs, 4-day adult
35
Ethanol 2.5% 3 hrs, larvae L3
16
Ethanol 5% 3 hrs, larvae L3
25
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
18
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
38
Caffeine 25 mg/ml 48 hrs, 4-day adult
8
Paraquat 5 mM 48 hrs, 4-day adult
28
Paraquat 10 mM 48 hrs, 4-day adult
15
Rotenone 2 μg 12 hrs, larvae L3
19
Rotenone 8 μg 12 hrs, larvae L3
5
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Linear, scaled to Moderate expression
Treatment
Expression Level
extended cold, 4-day adult
4
cold shock, 4-day adult
4
heat shock, 4-day adult
11
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
(37)
Cadmium 50 mM 48 hrs, 4-day adult
18
Cadmium 100 mM 48 hrs, 4-day adult
(45)
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
(70)
Zinc 5 mM 12 hrs, larvae L3
2
Zinc 4.5 mM 48 hrs, 4-day adult
(35)
Ethanol 2.5% 3 hrs, larvae L3
16
Ethanol 5% 3 hrs, larvae L3
25
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
18
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
(38)
Caffeine 25 mg/ml 48 hrs, 4-day adult
8
Paraquat 5 mM 48 hrs, 4-day adult
(28)
Paraquat 10 mM 48 hrs, 4-day adult
15
Rotenone 2 μg 12 hrs, larvae L3
19
Rotenone 8 μg 12 hrs, larvae L3
5
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Treatment
Expression Level
extended cold, 4-day adult
4
cold shock, 4-day adult
4
heat shock, 4-day adult
11
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
37
Cadmium 50 mM 48 hrs, 4-day adult
18
Cadmium 100 mM 48 hrs, 4-day adult
45
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
70
Zinc 5 mM 12 hrs, larvae L3
2
Zinc 4.5 mM 48 hrs, 4-day adult
35
Ethanol 2.5% 3 hrs, larvae L3
16
Ethanol 5% 3 hrs, larvae L3
25
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
18
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
38
Caffeine 25 mg/ml 48 hrs, 4-day adult
8
Paraquat 5 mM 48 hrs, 4-day adult
28
Paraquat 10 mM 48 hrs, 4-day adult
15
Rotenone 2 μg 12 hrs, larvae L3
19
Rotenone 8 μg 12 hrs, larvae L3
5
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Treatment
Expression Level
extended cold, 4-day adult
4
cold shock, 4-day adult
4
heat shock, 4-day adult
11
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
37
Cadmium 50 mM 48 hrs, 4-day adult
18
Cadmium 100 mM 48 hrs, 4-day adult
45
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
70
Zinc 5 mM 12 hrs, larvae L3
2
Zinc 4.5 mM 48 hrs, 4-day adult
35
Ethanol 2.5% 3 hrs, larvae L3
16
Ethanol 5% 3 hrs, larvae L3
25
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
18
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
38
Caffeine 25 mg/ml 48 hrs, 4-day adult
8
Paraquat 5 mM 48 hrs, 4-day adult
28
Paraquat 10 mM 48 hrs, 4-day adult
15
Rotenone 2 μg 12 hrs, larvae L3
19
Rotenone 8 μg 12 hrs, larvae L3
5
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Treatment
Expression Level
extended cold, 4-day adult
4
cold shock, 4-day adult
4
heat shock, 4-day adult
11
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
37
Cadmium 50 mM 48 hrs, 4-day adult
18
Cadmium 100 mM 48 hrs, 4-day adult
45
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
70
Zinc 5 mM 12 hrs, larvae L3
2
Zinc 4.5 mM 48 hrs, 4-day adult
35
Ethanol 2.5% 3 hrs, larvae L3
16
Ethanol 5% 3 hrs, larvae L3
25
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
18
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
38
Caffeine 25 mg/ml 48 hrs, 4-day adult
8
Paraquat 5 mM 48 hrs, 4-day adult
28
Paraquat 10 mM 48 hrs, 4-day adult
15
Rotenone 2 μg 12 hrs, larvae L3
19
Rotenone 8 μg 12 hrs, larvae L3
5
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Treatment
Expression Level
extended cold, 4-day adult
4
cold shock, 4-day adult
4
heat shock, 4-day adult
11
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
(37)
Cadmium 50 mM 48 hrs, 4-day adult
18
Cadmium 100 mM 48 hrs, 4-day adult
(45)
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
(70)
Zinc 5 mM 12 hrs, larvae L3
2
Zinc 4.5 mM 48 hrs, 4-day adult
(35)
Ethanol 2.5% 3 hrs, larvae L3
16
Ethanol 5% 3 hrs, larvae L3
25
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
18
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
(38)
Caffeine 25 mg/ml 48 hrs, 4-day adult
8
Paraquat 5 mM 48 hrs, 4-day adult
28
Paraquat 10 mM 48 hrs, 4-day adult
15
Rotenone 2 μg 12 hrs, larvae L3
19
Rotenone 8 μg 12 hrs, larvae L3
5
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Treatment
Expression Level
extended cold, 4-day adult
4
cold shock, 4-day adult
4
heat shock, 4-day adult
11
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
37
Cadmium 50 mM 48 hrs, 4-day adult
18
Cadmium 100 mM 48 hrs, 4-day adult
45
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
70
Zinc 5 mM 12 hrs, larvae L3
2
Zinc 4.5 mM 48 hrs, 4-day adult
35
Ethanol 2.5% 3 hrs, larvae L3
16
Ethanol 5% 3 hrs, larvae L3
25
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
18
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
38
Caffeine 25 mg/ml 48 hrs, 4-day adult
8
Paraquat 5 mM 48 hrs, 4-day adult
28
Paraquat 10 mM 48 hrs, 4-day adult
15
Rotenone 2 μg 12 hrs, larvae L3
19
Rotenone 8 μg 12 hrs, larvae L3
5
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Treatment
Expression Level
extended cold, 4-day adult
4
cold shock, 4-day adult
4
heat shock, 4-day adult
11
Cadmium 50 mM 6 hrs, larvae L3
10
Cadmium 50 mM 12 hrs, larvae L3
37
Cadmium 50 mM 48 hrs, 4-day adult
18
Cadmium 100 mM 48 hrs, 4-day adult
45
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
70
Zinc 5 mM 12 hrs, larvae L3
2
Zinc 4.5 mM 48 hrs, 4-day adult
35
Ethanol 2.5% 3 hrs, larvae L3
16
Ethanol 5% 3 hrs, larvae L3
25
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
18
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
38
Caffeine 25 mg/ml 48 hrs, 4-day adult
8
Paraquat 5 mM 48 hrs, 4-day adult
28
Paraquat 10 mM 48 hrs, 4-day adult
15
Rotenone 2 μg 12 hrs, larvae L3
19
Rotenone 8 μg 12 hrs, larvae L3
5
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Treatment
Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
External Data & Images
Linkouts
- Cell culture data for RNAi and other high-throughput technologies
Alleles & Phenotypes Summary of Allele Phenotypes Classical Alleles ( 2 ) For All Classical Alleles Show Alleles Carried on Transgenic Constructs
( 5 ) For All Alleles Carried on Transgenic
Constructs Show Aneuploid Aberrations Disrupted in Not disrupted in Transgenic Constructs & Insertions
Transgenic Constructs characterization construct
Insertions Gene Ontology: Function, Process
& Cellular Component ( 14 unique terms ) Terms Based on
Experimental Evidence ( 8 terms ) Molecular Function inferred from mutant phenotype
inferred from physical interaction with
ninaE inferred from direct assay
inferred from mutant phenotype
Biological Process inferred from genetic interaction with
Gprk2 inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component ( 0 terms) Terms Based on Predictions or
Assertions ( 7 terms ) Molecular Function inferred from sequence or structural similarity
non-traceable author statement
non-traceable author statement
Biological Process non-traceable author statement
inferred from sequence or structural similarity
non-traceable author statement
inferred from sequence or structural similarity
inferred from sequence or structural similarity
Cellular Component ( 0 terms) Sequence Ontology: Class of Gene Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions Interacts with Please look at the allele data
for full details of the genetic interactions
External Data Linkouts
- A database of protein and genetic interactions
- A comprehensive database of gene and protein interactions.
Protein-protein interactions (PPI) from both known and predicted PPI data sets.
- A protein-protein and protein-miRNA interaction database with multi-layered structure and multiple confidence scores.
Orthologs
OrthoDB Orthologs (41)
- based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
OrthoDB orthology group searches
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
Orthologs in Drosophila Species
(EOG6321HM )
Drosophila melanogaster
fruit fly
Orthologs in non-Drosophila Dipterans
(EOG696010 )
Aedes aegypti
Yellow fever mosquito
Anopheles gambiae
Malaria mosquito
Culex quinquefasciatus
Southern house mosquito
Culex quinquefasciatus
Southern house mosquito
Orthologs in non-Dipteran Insects
(EOG612K1J )
Apis mellifera
Western honey bee
Amel\GB51749
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG006459
Acromyrmex echinatior
Panamanian leafcutter ant
Aech\AECH11944
Atta cephalotes
Leafcutter ant
Acep\ACEP23634
Camponotus floridanus
Florida carpenter ant
Cflo\CFLO18400
Harpegnathos saltator
Jerdons jumping ant
Hsal\HSAL20177
Linepithema humile
Argentine ant
Lhum\LH24330
Pogonomyrmex barbatus
Red harvester ant
Pbar\PB13981
Solenopsis invicta
Red fire ant
Sinv\SINV12451
Acyrthosiphon pisum
Pea aphid
Pediculus humanus
Human body louse
Tribolium castaneum
Red flour beetle
Orthologs in non-Insect Arthropods
(EOG68PK16 )
Ixodes scapularis
Deer tick
Orthologs in non-Arthropod Metazoa
(EOG6HJ1VC )
Caenorhabditis elegans
Nematode
Strongylocentrotus purpuratus
Purple sea urchin
Strongylocentrotus purpuratus
Purple sea urchin
Xenopus tropicalis
Western clawed frog
Gallus gallus
Domestic chicken
Gallus gallus
Domestic chicken
Rattus norvegicus
Norway rat
Human Orthologs (2)AAA Orthologs (0)
based on analysis using Dmel annotation version 4.3
Stocks & Reagents Stocks Listed in FlyBase ( 4 )Bloomington Genomic Clones ( 1 )Please Note FlyBase no
longer curates genomic clone accessions so this list
may not be complete
cDNA Clones ( 138 )Please Note This section lists
cDNAs and ESTs that fall within the genomic extent
of the gene model, which may include cDNAs and ESTs
of genes within introns, or of overlapping genes.
Please see
GBrowse for alignment of the cDNAs and ESTs
to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones Other clones cDNA Clones, End Sequenced
(ESTs) BDGP DGC clones Other clones RNAi & Array Information Linkouts
- Results from RNAi screens.
- GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Antibody Information
Other Information Discoverer Etymology Identification Relationship to Other Genes Source for database identity of Source for database merge of Source for merge of: Gprk1 CG40129
Source for merge of: Gprk1 Rok
Additional comments Other Comments New annotation (CG40129) in release 3 of the genome annotation.
Gprk1 has been cloned and sequenced.
External Crossreferences & Linkouts
Sequence Crossreferences
- A searchable database of RefSeq genes.
Other Crossreferences
domains - A database of protein families, domains, and functional sites
Linkouts
- A database of protein and genetic interactions
- A comprehensive database of gene and protein interactions.
- Results from RNAi screens.
- Cell culture data for RNAi and other high-throughput technologies
- Integrated genomics database for Drosophila, Anopheles, and C.elegans
- GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Protein-protein interactions (PPI) from both known and predicted PPI data sets.
- Data generated by the modENCODE project.
- A protein-protein and protein-miRNA interaction database with multi-layered structure and multiple confidence scores.
Synonyms & Secondary IDs
( 10 )Reported As Symbol Synonym Name Synonym G protein-coupled receptor kinase 1
Secondary FlyBase
IDs FBan0040129 FBgn0004833 FBgn0023488 FBgn0058129 References ( 26 )Generate a list of List References by type
Recent research papers ( 1 )
Soibam et al., 2012, PLoS ONE 7(10): e46570Modeling Drosophila positional preferences in open field arenas with directional persistence and wall attraction. [FBrf0219693]
Recent reviews (0)
All reviews listed in FlyBase were published before 2011