A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\p120ctn

General Information
SymbolDmel\p120ctnSpeciesD. melanogaster
NameAdherens junction protein p120Annotation symbolCG17484
Feature typeprotein_coding_geneFlyBase IDFBgn0260799
Gene Model StatusCurrent Stock availability 6 publicly available
Also Known Asp120, p120ctn, dP120ctn, Dp120ctn
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map41B1-41B1Sequence location2R:482,798..496,995 [+]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene Adherens junction protein p120 is referred to in FlyBase by the symbol Dmel\p120ctn (CG17484, FBgn0260799). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: binding. There is experimental evidence that it is involved in the biological process: adherens junction maintenance; cell adhesion; compound eye morphogenesis. 15 alleles are reported. The phenotypes of these alleles are annotated with: dorsal closure embryo; stage 14 embryo; inter-ommatidial cell; embryonic leading edge cell. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Armadillo; Armadillo-like helical; Armadillo-type fold. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, larval hindgut, larval fat body, larval trachea, adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult crop, larval/adult midgut, adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, adult spermathecae, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1635501_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of p120ctn. Gene sequence location is 2R:482798..496995.

External Summaries
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
41B1-41B1  
 
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
41C-41C  
(determined by in situ hybridisation)  
41C-41C  
(determined by in situ hybridisation)  
41A-41C  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\p120ctn for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0111113 FBtr0111114 FBpp0110406 FBpp0110405 FBti0124944 FBti0101615
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0111114
  2678
  781
FBtr0111113
  2958
  767
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0110406  
86.8  
781  
6.90  
FBpp0110405  
85.3  
767  
6.76  
Additional Polypeptide Data & Comments
Reported size (kDa)
781 (aa); 88 (kD observed); 87 (kD predicted)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Armadillo (IPR000225)
Armadillo-type fold (IPR016024)
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
p120ctn transcripts are expressed in all cells during embryogenesis. Elevated levels are observed in several tissues, many of which are undergoing morphogenetic movements including the invaginating posterior midgut, CNS, migrating anterior and posterior midguts, foregut, hindgut, and cells in the midgut constriction.
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
In ovaries, p120ctn protein accumulates in the adherens junctions of epithelial follicle cells, at junctions between migrating border cells, and weakly in junctions between germ cells. In embryos, p120ctn protein accumulates at cell-cell adherens junctions in the epidermis and gut. The protein is present throughout embryogenesis, though the levels are lower in early embryonic stages than those of other core adherens junctions proteins such as arm protein and shg protein. p120ctn protein also accumulates in a variety of other tissues as observed in some cases by GFP staining. These include trachea, axons of the CNS, and sensory structures of the PNS. In eye imaginal discs, p120ctn protein localizes at cell-cell boundaries anterior to the morphogenetic furrow and at elevated levels where differentiating cells abut one another. In larval brains, @p120ctn localizes to cell-cell boundaries between nuroblasts, to GMCs, and to axons emerging from neuroblast progeny.
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view p120ctn-RB p120ctn-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0260799


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0260799
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0260799 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 3676
embryo 02-04hr
 
 5272
embryo 04-06hr
 
 4956
embryo 06-08hr
 
 3756
embryo 08-10hr
 
 5551
embryo 10-12hr
 
 5871
embryo 12-14hr
 
 6715
embryo 14-16hr
 
 1802
embryo 16-18hr
 
 3077
embryo 18-20hr
 
 1533
embryo 20-22hr
 
 2719
embryo 22-24hr
 
 3993
larva L1
 
 938
larva L2
 
 1079
larva L3 12hr old
 
 656
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 
 1639
larva L3 puffstage 7-9
 
 3213
white prepupae new
 
 3543
white prepupae 12hr
 
 3407
white prepupae 24hr
 
 3381
pupae 2d postWPP
 
 3036
pupae 3d postWPP
 
 2034
pupae 4d postWPP
 
 677
adult male 01day
 
 1191
adult male 05day
 
 813
adult male 30day
 
 580
adult female 01day
 
 786
adult female 05day
 
 2603
adult female 30day
 
 2013
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (3676)
embryo 02-04hr
 (5272)
embryo 04-06hr
 (4956)
embryo 06-08hr
 (3756)
embryo 08-10hr
 (5551)
embryo 10-12hr
 (5871)
embryo 12-14hr
 (6715)
embryo 14-16hr
 (1802)
embryo 16-18hr
 (3077)
embryo 18-20hr
 (1533)
embryo 20-22hr
 (2719)
embryo 22-24hr
 (3993)
larva L1
 (938)
larva L2
 (1079)
larva L3 12hr old
 (656)
larva L3 puffstage 1-2
 (922)
larva L3 puffstage 3-6
 (1639)
larva L3 puffstage 7-9
 (3213)
white prepupae new
 (3543)
white prepupae 12hr
 (3407)
white prepupae 24hr
 (3381)
pupae 2d postWPP
 (3036)
pupae 3d postWPP
 (2034)
pupae 4d postWPP
 (677)
adult male 01day
 (1191)
adult male 05day
 (813)
adult male 30day
 (580)
adult female 01day
 (786)
adult female 05day
 (2603)
adult female 30day
 (2013)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (3676)
embryo 02-04hr
 (5272)
embryo 04-06hr
 (4956)
embryo 06-08hr
 (3756)
embryo 08-10hr
 (5551)
embryo 10-12hr
 (5871)
embryo 12-14hr
 (6715)
embryo 14-16hr
 (1802)
embryo 16-18hr
 (3077)
embryo 18-20hr
 (1533)
embryo 20-22hr
 (2719)
embryo 22-24hr
 (3993)
larva L1
 
 938
larva L2
 
 1079
larva L3 12hr old
 
 656
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 (1639)
larva L3 puffstage 7-9
 (3213)
white prepupae new
 (3543)
white prepupae 12hr
 (3407)
white prepupae 24hr
 (3381)
pupae 2d postWPP
 (3036)
pupae 3d postWPP
 (2034)
pupae 4d postWPP
 
 677
adult male 01day
 
 1191
adult male 05day
 
 813
adult male 30day
 
 580
adult female 01day
 
 786
adult female 05day
 (2603)
adult female 30day
 (2013)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3676
embryo 02-04hr
 
 5272
embryo 04-06hr
 
 4956
embryo 06-08hr
 
 3756
embryo 08-10hr
 
 5551
embryo 10-12hr
 
 5871
embryo 12-14hr
 
 6715
embryo 14-16hr
 
 1802
embryo 16-18hr
 
 3077
embryo 18-20hr
 
 1533
embryo 20-22hr
 
 2719
embryo 22-24hr
 
 3993
larva L1
 
 938
larva L2
 
 1079
larva L3 12hr old
 
 656
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 
 1639
larva L3 puffstage 7-9
 
 3213
white prepupae new
 
 3543
white prepupae 12hr
 
 3407
white prepupae 24hr
 
 3381
pupae 2d postWPP
 
 3036
pupae 3d postWPP
 
 2034
pupae 4d postWPP
 
 677
adult male 01day
 
 1191
adult male 05day
 
 813
adult male 30day
 
 580
adult female 01day
 
 786
adult female 05day
 
 2603
adult female 30day
 
 2013
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3676
embryo 02-04hr
 
 5272
embryo 04-06hr
 
 4956
embryo 06-08hr
 
 3756
embryo 08-10hr
 
 5551
embryo 10-12hr
 
 5871
embryo 12-14hr
 
 6715
embryo 14-16hr
 
 1802
embryo 16-18hr
 
 3077
embryo 18-20hr
 
 1533
embryo 20-22hr
 
 2719
embryo 22-24hr
 
 3993
larva L1
 
 938
larva L2
 
 1079
larva L3 12hr old
 
 656
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 
 1639
larva L3 puffstage 7-9
 
 3213
white prepupae new
 
 3543
white prepupae 12hr
 
 3407
white prepupae 24hr
 
 3381
pupae 2d postWPP
 
 3036
pupae 3d postWPP
 
 2034
pupae 4d postWPP
 
 677
adult male 01day
 
 1191
adult male 05day
 
 813
adult male 30day
 
 580
adult female 01day
 
 786
adult female 05day
 
 2603
adult female 30day
 
 2013
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0260799 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 3676
embryo 02-04hr
 
 5272
embryo 04-06hr
 
 4956
embryo 06-08hr
 
 3756
embryo 08-10hr
 
 5551
embryo 10-12hr
 
 5871
embryo 12-14hr
 
 6715
embryo 14-16hr
 
 1802
embryo 16-18hr
 
 3077
embryo 18-20hr
 
 1533
embryo 20-22hr
 
 2719
embryo 22-24hr
 
 3993
larva L1
 
 938
larva L2
 
 1079
larva L3 12hr old
 
 656
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 
 1639
larva L3 puffstage 7-9
 
 3213
white prepupae new
 
 3543
white prepupae 12hr
 
 3407
white prepupae 24hr
 
 3381
pupae 2d postWPP
 
 3036
pupae 3d postWPP
 
 2034
pupae 4d postWPP
 
 677
adult male 01day
 
 1191
adult male 05day
 
 813
adult male 30day
 
 580
adult female 01day
 
 786
adult female 05day
 
 2603
adult female 30day
 
 2013
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (3676)
embryo 02-04hr
 (5272)
embryo 04-06hr
 (4956)
embryo 06-08hr
 (3756)
embryo 08-10hr
 (5551)
embryo 10-12hr
 (5871)
embryo 12-14hr
 (6715)
embryo 14-16hr
 (1802)
embryo 16-18hr
 (3077)
embryo 18-20hr
 (1533)
embryo 20-22hr
 (2719)
embryo 22-24hr
 (3993)
larva L1
 (938)
larva L2
 (1079)
larva L3 12hr old
 (656)
larva L3 puffstage 1-2
 (922)
larva L3 puffstage 3-6
 (1639)
larva L3 puffstage 7-9
 (3213)
white prepupae new
 (3543)
white prepupae 12hr
 (3407)
white prepupae 24hr
 (3381)
pupae 2d postWPP
 (3036)
pupae 3d postWPP
 (2034)
pupae 4d postWPP
 (677)
adult male 01day
 (1191)
adult male 05day
 (813)
adult male 30day
 (580)
adult female 01day
 (786)
adult female 05day
 (2603)
adult female 30day
 (2013)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (3676)
embryo 02-04hr
 (5272)
embryo 04-06hr
 (4956)
embryo 06-08hr
 (3756)
embryo 08-10hr
 (5551)
embryo 10-12hr
 (5871)
embryo 12-14hr
 (6715)
embryo 14-16hr
 1802
embryo 16-18hr
 (3077)
embryo 18-20hr
 1533
embryo 20-22hr
 (2719)
embryo 22-24hr
 (3993)
larva L1
 
 938
larva L2
 
 1079
larva L3 12hr old
 
 656
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 1639
larva L3 puffstage 7-9
 (3213)
white prepupae new
 (3543)
white prepupae 12hr
 (3407)
white prepupae 24hr
 (3381)
pupae 2d postWPP
 (3036)
pupae 3d postWPP
 2034
pupae 4d postWPP
 
 677
adult male 01day
 
 1191
adult male 05day
 
 813
adult male 30day
 
 580
adult female 01day
 
 786
adult female 05day
 (2603)
adult female 30day
 2013
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3676
embryo 02-04hr
 
 5272
embryo 04-06hr
 
 4956
embryo 06-08hr
 
 3756
embryo 08-10hr
 
 5551
embryo 10-12hr
 
 5871
embryo 12-14hr
 
 6715
embryo 14-16hr
 
 1802
embryo 16-18hr
 
 3077
embryo 18-20hr
 
 1533
embryo 20-22hr
 
 2719
embryo 22-24hr
 
 3993
larva L1
 
 938
larva L2
 
 1079
larva L3 12hr old
 
 656
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 
 1639
larva L3 puffstage 7-9
 
 3213
white prepupae new
 
 3543
white prepupae 12hr
 
 3407
white prepupae 24hr
 
 3381
pupae 2d postWPP
 
 3036
pupae 3d postWPP
 
 2034
pupae 4d postWPP
 
 677
adult male 01day
 
 1191
adult male 05day
 
 813
adult male 30day
 
 580
adult female 01day
 
 786
adult female 05day
 
 2603
adult female 30day
 
 2013
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3676
embryo 02-04hr
 
 5272
embryo 04-06hr
 
 4956
embryo 06-08hr
 
 3756
embryo 08-10hr
 
 5551
embryo 10-12hr
 
 5871
embryo 12-14hr
 
 6715
embryo 14-16hr
 
 1802
embryo 16-18hr
 
 3077
embryo 18-20hr
 
 1533
embryo 20-22hr
 
 2719
embryo 22-24hr
 
 3993
larva L1
 
 938
larva L2
 
 1079
larva L3 12hr old
 
 656
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 
 1639
larva L3 puffstage 7-9
 
 3213
white prepupae new
 
 3543
white prepupae 12hr
 
 3407
white prepupae 24hr
 
 3381
pupae 2d postWPP
 
 3036
pupae 3d postWPP
 
 2034
pupae 4d postWPP
 
 677
adult male 01day
 
 1191
adult male 05day
 
 813
adult male 30day
 
 580
adult female 01day
 
 786
adult female 05day
 
 2603
adult female 30day
 
 2013
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0260799


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0260799
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, larval hindgut, larval fat body, larval trachea, adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult crop, larval/adult midgut, adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, adult spermathecae, adult male reproductive system, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0260799 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 1104.6
Larval Midgut
 
 258.6
Larval Hindgut
 
 599.5
Larval Malpighian Tubules
 
 407.2
Larval Fat Body
 
 697.2
Larval Salivary Gland
 
 308.8
Larval Trachea
 
 621.25
Larval Carcass
 
 396.55
Adult Head
 
 781
Adult Eye
 
 1675.05
Adult Brain
 
 1059.6
Adult Thoracic-Abdominal Ganglion
 
 1209.8
Adult Crop
 
 440.8
Adult Midgut
 
 212.8
Adult Hindgut
 
 367.4
Adult Malpighian Tubules
 
 153.5
Adult Fat Body
 
 259.4
Adult Salivary Gland
 
 147.3
Adult Heart
 
 333.425
Adult VirginFemale Spermatheca
 
 415.3
Adult InseminatedFemale Spermatheca
 
 436.8
Adult Ovary
 
 794.3
Adult Testis
 
 165.2
Adult Male Accessory Gland
 
 153.5
Adult Carcass
 
 220.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (1104.6)
Larval Midgut
 
 258.6
Larval Hindgut
 (599.5)
Larval Malpighian Tubules
 
 407.2
Larval Fat Body
 (697.2)
Larval Salivary Gland
 
 308.8
Larval Trachea
 (621.25)
Larval Carcass
 
 396.55
Adult Head
 (781)
Adult Eye
 (1675.05)
Adult Brain
 (1059.6)
Adult Thoracic-Abdominal Ganglion
 (1209.8)
Adult Crop
 
 440.8
Adult Midgut
 
 212.8
Adult Hindgut
 
 367.4
Adult Malpighian Tubules
 
 153.5
Adult Fat Body
 
 259.4
Adult Salivary Gland
 
 147.3
Adult Heart
 
 333.425
Adult VirginFemale Spermatheca
 
 415.3
Adult InseminatedFemale Spermatheca
 
 436.8
Adult Ovary
 (794.3)
Adult Testis
 
 165.2
Adult Male Accessory Gland
 
 153.5
Adult Carcass
 
 220.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 (1104.6)
Larval Midgut
 
 258.6
Larval Hindgut
 
 599.5
Larval Malpighian Tubules
 
 407.2
Larval Fat Body
 
 697.2
Larval Salivary Gland
 
 308.8
Larval Trachea
 
 621.25
Larval Carcass
 
 396.55
Adult Head
 
 781
Adult Eye
 (1675.05)
Adult Brain
 1059.6
Adult Thoracic-Abdominal Ganglion
 (1209.8)
Adult Crop
 
 440.8
Adult Midgut
 
 212.8
Adult Hindgut
 
 367.4
Adult Malpighian Tubules
 
 153.5
Adult Fat Body
 
 259.4
Adult Salivary Gland
 
 147.3
Adult Heart
 
 333.425
Adult VirginFemale Spermatheca
 
 415.3
Adult InseminatedFemale Spermatheca
 
 436.8
Adult Ovary
 
 794.3
Adult Testis
 
 165.2
Adult Male Accessory Gland
 
 153.5
Adult Carcass
 
 220.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 1104.6
Larval Midgut
 
 258.6
Larval Hindgut
 
 599.5
Larval Malpighian Tubules
 
 407.2
Larval Fat Body
 
 697.2
Larval Salivary Gland
 
 308.8
Larval Trachea
 
 621.25
Larval Carcass
 
 396.55
Adult Head
 
 781
Adult Eye
 
 1675.05
Adult Brain
 
 1059.6
Adult Thoracic-Abdominal Ganglion
 
 1209.8
Adult Crop
 
 440.8
Adult Midgut
 
 212.8
Adult Hindgut
 
 367.4
Adult Malpighian Tubules
 
 153.5
Adult Fat Body
 
 259.4
Adult Salivary Gland
 
 147.3
Adult Heart
 
 333.425
Adult VirginFemale Spermatheca
 
 415.3
Adult InseminatedFemale Spermatheca
 
 436.8
Adult Ovary
 
 794.3
Adult Testis
 
 165.2
Adult Male Accessory Gland
 
 153.5
Adult Carcass
 
 220.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0260799 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 1104.6
Larval Midgut
 
 258.6
Larval Hindgut
 
 599.5
Larval Malpighian Tubules
 
 407.2
Larval Fat Body
 
 697.2
Larval Salivary Gland
 
 308.8
Larval Trachea
 
 621.25
Larval Carcass
 
 396.55
Adult Head
 
 781
Adult Eye
 
 1675.05
Adult Brain
 
 1059.6
Adult Thoracic-Abdominal Ganglion
 
 1209.8
Adult Crop
 
 440.8
Adult Midgut
 
 212.8
Adult Hindgut
 
 367.4
Adult Malpighian Tubules
 
 153.5
Adult Fat Body
 
 259.4
Adult Salivary Gland
 
 147.3
Adult Heart
 
 333.425
Adult VirginFemale Spermatheca
 
 415.3
Adult InseminatedFemale Spermatheca
 
 436.8
Adult Ovary
 
 794.3
Adult Testis
 
 165.2
Adult Male Accessory Gland
 
 153.5
Adult Carcass
 
 220.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (1104.6)
Larval Midgut
 
 258.6
Larval Hindgut
 599.5
Larval Malpighian Tubules
 
 407.2
Larval Fat Body
 697.2
Larval Salivary Gland
 
 308.8
Larval Trachea
 621.25
Larval Carcass
 
 396.55
Adult Head
 781
Adult Eye
 (1675.05)
Adult Brain
 (1059.6)
Adult Thoracic-Abdominal Ganglion
 (1209.8)
Adult Crop
 
 440.8
Adult Midgut
 
 212.8
Adult Hindgut
 
 367.4
Adult Malpighian Tubules
 
 153.5
Adult Fat Body
 
 259.4
Adult Salivary Gland
 
 147.3
Adult Heart
 
 333.425
Adult VirginFemale Spermatheca
 
 415.3
Adult InseminatedFemale Spermatheca
 
 436.8
Adult Ovary
 794.3
Adult Testis
 
 165.2
Adult Male Accessory Gland
 
 153.5
Adult Carcass
 
 220.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 1104.6
Larval Midgut
 
 258.6
Larval Hindgut
 
 599.5
Larval Malpighian Tubules
 
 407.2
Larval Fat Body
 
 697.2
Larval Salivary Gland
 
 308.8
Larval Trachea
 
 621.25
Larval Carcass
 
 396.55
Adult Head
 
 781
Adult Eye
 1675.05
Adult Brain
 1059.6
Adult Thoracic-Abdominal Ganglion
 1209.8
Adult Crop
 
 440.8
Adult Midgut
 
 212.8
Adult Hindgut
 
 367.4
Adult Malpighian Tubules
 
 153.5
Adult Fat Body
 
 259.4
Adult Salivary Gland
 
 147.3
Adult Heart
 
 333.425
Adult VirginFemale Spermatheca
 
 415.3
Adult InseminatedFemale Spermatheca
 
 436.8
Adult Ovary
 
 794.3
Adult Testis
 
 165.2
Adult Male Accessory Gland
 
 153.5
Adult Carcass
 
 220.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 1104.6
Larval Midgut
 
 258.6
Larval Hindgut
 
 599.5
Larval Malpighian Tubules
 
 407.2
Larval Fat Body
 
 697.2
Larval Salivary Gland
 
 308.8
Larval Trachea
 
 621.25
Larval Carcass
 
 396.55
Adult Head
 
 781
Adult Eye
 
 1675.05
Adult Brain
 
 1059.6
Adult Thoracic-Abdominal Ganglion
 
 1209.8
Adult Crop
 
 440.8
Adult Midgut
 
 212.8
Adult Hindgut
 
 367.4
Adult Malpighian Tubules
 
 153.5
Adult Fat Body
 
 259.4
Adult Salivary Gland
 
 147.3
Adult Heart
 
 333.425
Adult VirginFemale Spermatheca
 
 415.3
Adult InseminatedFemale Spermatheca
 
 436.8
Adult Ovary
 
 794.3
Adult Testis
 
 165.2
Adult Male Accessory Gland
 
 153.5
Adult Carcass
 
 220.6
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 781
 
NA 
Eye
 
 1675.05
 
NA 
Brain
 
 1059.6
 
1104.6 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 1209.8
 
NA 
Crop
 
 440.8
 
258.6 
Midgut
 
 212.8
 
599.5 
Hindgut
 
 367.4
 
407.2 
Malpighian Tubules
 
 153.5
 
697.2 
Fat Body
 
 259.4
 
308.8 
Salivary Gland
 
 147.3
 
NA 
Heart
 
 333.425
 
621.25 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 415.3
 
NA 
InseminatedFemale Spermatheca
 
 436.8
 
NA 
Ovary
 
 794.3
 
NA 
Testis
 
 165.2
 
NA 
Male Accessory Gland
 
 153.5
 
396.55 
Carcass
 
 220.6

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 2 )
For All Classical Alleles Show

Allele of p120ctnClassMutagenStocksKnown lesion
p120ctn308amorphic allele - genetic evidence, loss of function allele1 Yes
p120ctnMB06056
1 --
hide Alleles Carried on Transgenic Constructs ( 13 )
For All Alleles Carried on Transgenic Constructs Show

Allele of p120ctnClassMutagenStocksKnown lesion
p120ctnUbi-p63E.T:Avic\GFP2 Yes
p120ctnKK1135721 Yes
p120ctnScer\UAS.T:Avic\GFP1 Yes
p120ctn2200.Scer\UAS.T:Ivir\HA10 Yes
p120ctn700.Scer\UAS.T:Ivir\HA10 Yes
p120ctna.cMa0 Yes
p120ctncMa0 Yes
p120ctndsRNA.cFa0 Yes
p120ctndsRNA.Scer\UAS0 Yes
p120ctnScer\UAS.cFa
0 --
p120ctnScer\UAS.P\T.cMa0 Yes
p120ctnScer\UAS.T:Hsap\MYC0 Yes
p120ctnUbi-p63E.T:Hsap\MYC0 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
miscellaneous insertions
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 7 unique terms )
hide Terms Based on Experimental Evidence ( 6 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
inferred from genetic interaction with arm AND inferred from genetic interaction with shg
inferred from genetic interaction with Rho1
inferred from genetic interaction with shg
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay AND inferred from physical interaction with arm AND inferred from physical interaction with shg
inferred from direct assay
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term
References
Biological Process ( 0 terms)
Cellular Component
CV term
References
inferred from sequence or structural similarity
hide Sequence Ontology: Class of Gene
 
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
p120ctn allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 6 )
Bloomington
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 204 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: p120ctn CG17484
Source for merge of: p120ctn δ-catenin
Additional comments
hide Other Comments
Not an essential gene.
Df(2R)244 deletion mutants for this gene are viable and fertile.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
p120ctn interacts with the juxtamembrane region of shg. Overall orientation not stated: Stlk+ p120ctn+ P{SUPor-P}KG01086? CG17486+
p120ctn seems to encode an important positive modulator of cell adhesion though not itself an essential core component of the adherens junction.
A single member of the p120/δ-catenin family (p120ctn) is encoded in the D.melanogaster genome.
The interaction of shg with p120ctn is not required for shg function in vivo.
Identified by PCR based on homology to the vertebrate homologs.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Armadillo (IPR000225)
Armadillo-type fold (IPR016024)
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 14 )
Reported As
Symbol Synonym
P120-catenin
Name Synonym
Adherens junction protein p120
Adherens-junction-protein-p120
 
p120 catenin
P120-Catenin
Secondary FlyBase IDs
  • FBan0017484
  • FBgn0015587
  • FBgn0032995
  • FBgn0041583
hide References ( 59 )
Generate a list of
List References by type
hide Recent research papers ( 3 )
Di Stefano et al., 2011, Genes Dev. 25(1): 17--28
Functional antagonism between histone H3K4 demethylases in vivo. [FBrf0212709]
Coulthard et al., 2010, Genetics 185(2): 479--495
Essential loci in centromeric heterochromatin of Drosophila melanogaster. I: the right arm of chromosome 2. [FBrf0211235]
Tikhmyanova et al., 2010, PLoS ONE 5(8): e12369
Dcas supports cell polarization and cell-cell adhesion complexes in development. [FBrf0211678]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2010