Gene Dmel\Sytβ

FlyGene Wiki Help Close All Open All

General Information

Symbol

Dmel\Sytβ

Species

D. melanogaster

Name

Synaptotagmin β

Annotation symbol

CG42333

Feature type

protein_coding_gene

FlyBase ID

FBgn0261090

Gene Model Status

Current

Stock availability

16 publicly available

Also Known As

CG3020, Syt13

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

71B2-71B2

Sequence location

3L:15,007,795..15,058,077 [-]

Genomic Maps

Select View:

Summary Information

Automatically generated summary

See sections below for more information

The gene Synaptotagmin β is referred to in FlyBase by the symbol Dmel\Sytβ (CG42333, FBgn0261090). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: calcium-dependent phospholipid binding. Based on sequence similarity, it is predicted to be involved in the biological process: synaptic vesicle exocytosis; neurotransmitter secretion. 17 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: C2 calcium-dependent membrane targeting; C2 calcium/lipid-binding domain, CaLB; C2 membrane targeting protein; Synaptotagmin. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Gene sequence location is 3L:15007795..15058077.

User Contributed Data

Beta version, feedback welcome

Recent Updates

Description

What does this section display?

This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).

What does this section not display?

This section does not currently display links that were removed or gene model changes.

Update Feed

Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.

FB2013_03

FB2013_02

All updates

Click here to see a list of all updates to this record from FB2010_08 and on.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

71B2-71B2

Limits computationally determined from genome sequence between P{PZ}l(3)rO220^rO220 and P{lacW}cp309^s2172&P{lacW}l(3)j2A2^j2A2

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

Left of (cM)

Right of (cM)

Notes

Gene Model & Products

Please see the GBrowse view of Dmel\Sytβ for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Comments on Gene Model

Gene model reviewed during 5.46

Gene merge based on EST/cDNA data.

Low-frequency RNA-Seq exon junction(s) not annotated.

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

Sytβ-RC

FBtr0299848

NM_144170

3854

546

Sytβ-RD

FBtr0299849

NM_140477

3952

602

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

Sytβ-PC

FBpp0289126

60.3

546

8.92

NP_652427

AAF49680

Sytβ-PD

FBpp0289127

65.0

602

7.90

NP_648734

AAF49683

Additional Polypeptide Data & Comments

Reported size (kDa)

Comments

External Data

Linkouts

Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

C2 calcium/lipid-binding domain, CaLB (IPR008973)

Synaptotagmin (IPR001565)

C2 calcium-dependent membrane targeting (IPR000008)

C2 membrane targeting protein (IPR018029)

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

Mapped Features

Mapped Features have been reorganized, please see this article for details.

Additional mapped features and mutations can be found on GBrowse or related reports.

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

Crossreferences

Expression Data

Transcript Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization (GO Cellular Component)

CV term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

Reference

See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)

	Styles
	Linear
	Logarithmic
	Heatmap
	Back-to-back
	Scales
	gene max expression
	Moderate expression bin max
	High level expression bin max
	Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues.
[download data (TSV)]

Guide to FlyAtlas expression level colors
	No expression (0 - 9.999)
	Low expression (10 - 99.999)
	Moderate expression (100 - 499.999)
	High level expression (500 - 999.999)
	Very high expression (>999.999)

Heatmap
Tissue		Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)

modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		6
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		4
head, mated 4-day female		6
head, mated 20-day female		4
head, mated 1-day male		7
head, mated 4-day male		11
head, mated 20-day male		10
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		1
digestive system, 1-day adult		1
digestive system, 4-day adult		1
digestive system, 20-day adult		1
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		1
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate

Linear, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		6
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		4
head, mated 4-day female		6
head, mated 20-day female		4
head, mated 1-day male		7
head, mated 4-day male		11
head, mated 20-day male		10
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		1
digestive system, 1-day adult		1
digestive system, 4-day adult		1
digestive system, 20-day adult		1
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		1
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		6
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		4
head, mated 4-day female		6
head, mated 20-day female		4
head, mated 1-day male		7
head, mated 4-day male		11
head, mated 20-day male		10
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		1
digestive system, 1-day adult		1
digestive system, 4-day adult		1
digestive system, 20-day adult		1
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		1
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		6
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		4
head, mated 4-day female		6
head, mated 20-day female		4
head, mated 1-day male		7
head, mated 4-day male		11
head, mated 20-day male		10
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		1
digestive system, 1-day adult		1
digestive system, 4-day adult		1
digestive system, 20-day adult		1
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		1
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		6
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		4
head, mated 4-day female		6
head, mated 20-day female		4
head, mated 1-day male		7
head, mated 4-day male		11
head, mated 20-day male		10
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		1
digestive system, 1-day adult		1
digestive system, 4-day adult		1
digestive system, 20-day adult		1
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		1
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate

log, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		6
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		4
head, mated 4-day female		6
head, mated 20-day female		4
head, mated 1-day male		7
head, mated 4-day male		11
head, mated 20-day male		10
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		1
digestive system, 1-day adult		1
digestive system, 4-day adult		1
digestive system, 20-day adult		1
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		1
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		6
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		4
head, mated 4-day female		6
head, mated 20-day female		4
head, mated 1-day male		7
head, mated 4-day male		11
head, mated 20-day male		10
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		1
digestive system, 1-day adult		1
digestive system, 4-day adult		1
digestive system, 20-day adult		1
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		1
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		12
central nervous system, pupae P8		6
head, virgin 1-day female		5
head, virgin 4-day female		5
head, virgin 20-day female		4
head, mated 1-day female		4
head, mated 4-day female		6
head, mated 20-day female		4
head, mated 1-day male		7
head, mated 4-day male		11
head, mated 20-day male		10
salivary gland, larvae L3 wandering		0
salivary gland, white prepupae		0
digestive system, larvae L3 wandering		1
digestive system, 1-day adult		1
digestive system, 4-day adult		1
digestive system, 20-day adult		1
fat body, larvae L3 wandering		0
fat body, white prepupae		0
fat body, pupae P8		1
carcass, larvae L3 wandering		2
carcass, 1-day adult		1
carcass, 4-day adult		1
carcass, 20-day adult		0
ovary, virgin 4-day female		0
ovary, mated 4-day female		0
testis, mated 4-day male		0
accessory gland, mated 4-day male		1
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Tissue		Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male

modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages.
[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		1
embryo 16-18hr		5
embryo 18-20hr		7
embryo 20-22hr		9
embryo 22-24hr		10
larva L1		7
larva L2		2
larva L3 12hr old		1
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		1
white prepupae 24hr		2
pupae 2d postWPP		1
pupae 3d postWPP		2
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate

Linear, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		1
embryo 16-18hr		5
embryo 18-20hr		7
embryo 20-22hr		9
embryo 22-24hr		10
larva L1		7
larva L2		2
larva L3 12hr old		1
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		1
white prepupae 24hr		2
pupae 2d postWPP		1
pupae 3d postWPP		2
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		1
embryo 16-18hr		5
embryo 18-20hr		7
embryo 20-22hr		9
embryo 22-24hr		10
larva L1		7
larva L2		2
larva L3 12hr old		1
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		1
white prepupae 24hr		2
pupae 2d postWPP		1
pupae 3d postWPP		2
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		1
embryo 16-18hr		5
embryo 18-20hr		7
embryo 20-22hr		9
embryo 22-24hr		10
larva L1		7
larva L2		2
larva L3 12hr old		1
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		1
white prepupae 24hr		2
pupae 2d postWPP		1
pupae 3d postWPP		2
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		1
embryo 16-18hr		5
embryo 18-20hr		7
embryo 20-22hr		9
embryo 22-24hr		10
larva L1		7
larva L2		2
larva L3 12hr old		1
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		1
white prepupae 24hr		2
pupae 2d postWPP		1
pupae 3d postWPP		2
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate

log, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		1
embryo 16-18hr		5
embryo 18-20hr		7
embryo 20-22hr		9
embryo 22-24hr		10
larva L1		7
larva L2		2
larva L3 12hr old		1
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		1
white prepupae 24hr		2
pupae 2d postWPP		1
pupae 3d postWPP		2
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		1
embryo 16-18hr		5
embryo 18-20hr		7
embryo 20-22hr		9
embryo 22-24hr		10
larva L1		7
larva L2		2
larva L3 12hr old		1
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		1
white prepupae 24hr		2
pupae 2d postWPP		1
pupae 3d postWPP		2
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		1
embryo 16-18hr		5
embryo 18-20hr		7
embryo 20-22hr		9
embryo 22-24hr		10
larva L1		7
larva L2		2
larva L3 12hr old		1
larva L3 puffstage 1-2		0
larva L3 puffstage 3-6		1
larva L3 puffstage 7-9		2
white prepupae new		1
white prepupae 12hr		1
white prepupae 24hr		2
pupae 2d postWPP		1
pupae 3d postWPP		2
pupae 4d postWPP		2
adult male 01day		2
adult male 05day		2
adult male 30day		2
adult female 01day		1
adult female 05day		0
adult female 30day		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Developmental Stage		Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day

modENCODE Temporal Expression Data (Graveley et al., 2011)

modENCODE Cell Lines RNA-Seq

modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		0
cold shock, 4-day adult		0
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		1
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		0
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		0
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		1
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate

Linear, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		0
cold shock, 4-day adult		0
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		1
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		0
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		0
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		1
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		0
cold shock, 4-day adult		0
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		1
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		0
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		0
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		1
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		0
cold shock, 4-day adult		0
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		1
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		0
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		0
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		1
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		0
cold shock, 4-day adult		0
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		1
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		0
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		0
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		1
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate

log, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		0
cold shock, 4-day adult		0
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		1
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		0
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		0
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		1
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		0
cold shock, 4-day adult		0
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		1
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		0
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		0
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		1
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		0
cold shock, 4-day adult		0
heat shock, 4-day adult		0
Cadmium 50 mM 6 hrs, larvae L3		0
Cadmium 50 mM 12 hrs, larvae L3		1
Cadmium 50 mM 48 hrs, 4-day adult		0
Cadmium 100 mM 48 hrs, 4-day adult		0
Copper 0.5 mM 12 hrs, larvae L3		0
Copper 15 mM 48 hrs, 4-day adult		3
Zinc 5 mM 12 hrs, larvae L3		0
Zinc 4.5 mM 48 hrs, 4-day adult		1
Ethanol 2.5% 3 hrs, larvae L3		1
Ethanol 5% 3 hrs, larvae L3		1
Ethanol 10% 3 hrs, larvae L3		0
Caffeine 1.5 mg/ml 4 hrs, larvae L3		1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		1
Caffeine 25 mg/ml 48 hrs, 4-day adult		1
Paraquat 5 mM 48 hrs, 4-day adult		1
Paraquat 10 mM 48 hrs, 4-day adult		1
Rotenone 2 μg 12 hrs, larvae L3		0
Rotenone 8 μg 12 hrs, larvae L3		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Treatment		Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3

Expression Clusters

A cluster of genes with similar mRNA expression dynamics across development.

(Graveley et al., 2011)

mE1_20_mRNA_expression_cluster_13

External Data & Images

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0261090

Alleles & Phenotypes

Summary of Allele Phenotypes

Lethality

Allele

viable, with Scer\GAL4^pnr-MD237

Phenotype manifest in

Allele

Classical Alleles ( 10 )

For All Classical Alleles Show

Allele of Sytβ	Mutagen	Stocks	Known lesion
Sytβ^BG02150		1	--
Sytβ^MB02011		1	--
Sytβ^MB11464		1	--
Sytβ^MI00405		1	--
Sytβ^MI01009		1	--
Sytβ^MI03710		1	--
Sytβ^MI03867		1	--
Sytβ^PL00192		1	--
Sytβ^CPTI003250	piggyBac transposase	0	Yes
Sytβ^DG10711		0	--

Alleles Carried on Transgenic Constructs ( 7 )

For All Alleles Carried on Transgenic Constructs Show

Allele of Sytβ	Mutagen	Stocks	Known lesion
Sytβ^GD15755	in vitro construct - RNAi in vitro construct - regulatory fusion	2	Yes
Sytβ^GD14882	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
Sytβ^GD3879	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
Sytβ^HMS02296	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
Sytβ^JF02593	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
Sytβ^KK112599	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
Sytβ^KK112946	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes

Aneuploid Aberrations

Disrupted in

Df(3L)Exel6125

(Ryder, 2004.4.26)

Df(3L)Exel6126

(Ryder, 2004.4.26)

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

Insertions

Type of insertions

Name

Expression data

miscellaneous insertions

Mi{MIC}Rpn12R^MI03710

PBac{754.P.FSVS-0}Sytβ^CPTI003250

insertion of enhancer trap binary system

Mi{ET1}Sytβ^MB02011

Mi{ET1}Sytβ^MB11464

PBac{GAL4D,EYFP}l(3)51⁵¹

PBac{GAL4D,EYFP}Sytβ^PL00192

Gene Ontology: Function, Process & Cellular Component ( 6 unique terms )

Terms Based on Experimental Evidence ( 0 terms )

Terms Based on Predictions or Assertions ( 6 terms )

Molecular Function

CV term

Evidence

References

calcium-dependent phospholipid binding

inferred from sequence or structural similarity with UniProtKB:P29101

(FlyBase, 1992-)

transporter activity

inferred from electronic annotation with InterPro:IPR001565

(FlyBase Curators et al., 2004-)

Biological Process

CV term

Evidence

References

neurotransmitter secretion

inferred from sequence or structural similarity with UniProtKB:P29101

(FlyBase, 1992-)

synaptic vesicle exocytosis

inferred from sequence or structural similarity

(Littleton, 2000)

Cellular Component

CV term

Evidence

References

membrane

inferred from electronic annotation with InterPro:IPR001565

(FlyBase Curators et al., 2004-)

synaptic vesicle

inferred from sequence or structural similarity

(Littleton, 2000)

inferred from sequence or structural similarity with UniProtKB:P29101

(FlyBase, 1992-)

Sequence Ontology: Class of Gene

gene

(Adolfsen et al., 2004, )

nuclear_gene

protein_coding_gene

Interactions & Pathways

Summary of Physical Interactions

Summary of Genetic Interactions

Interacts with

Please look at the allele data for full details of the genetic interactions

Sytβ allele

Gene

References

External Data

Linkouts

BioGRID - A database of protein and genetic interactions

•

64954

DroID - A comprehensive database of gene and protein interactions.

•

FBgn0261090

InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.

•

39630

Orthologs

OrthoDB Orthologs (28) - based on analysis using Dmel annotation version 5.41

OrthoDB Ortholog Groups

OrthoDB orthology group searches

(Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288)

Drosophila inclusive ortholog search

EOG6SXNZ6

Dipteran inclusive ortholog search

EOG66HGK3

Insect inclusive ortholog search

EOG68GV03

Arthropod inclusive ortholog search

EOG6905RQ

Metazoa inclusive ortholog search

No orthologs identified

Orthologs in Drosophila Species (EOG6SXNZ6)

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila melanogaster

fruit fly

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA15723

Drosophila persimilis

Dper\GL25921

Drosophila willistoni

Dwil\GK17413

Drosophila virilis

Dvir\GJ11619

Drosophila mojavensis

Dmoj\GI11364

Drosophila grimshawi

Dgri\GH16678

Orthologs in non-Drosophila Dipterans (EOG66HGK3)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL017021

Anopheles gambiae

Malaria mosquito

Agam\AGAP010653

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ009035

Orthologs in non-Dipteran Insects (EOG68GV03)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Apis mellifera

Western honey bee

Amel\GB50729

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG008831

Acromyrmex echinatior

Panamanian leafcutter ant

Aech\AECH23192

Atta cephalotes

Leafcutter ant

Acep\ACEP21728

Camponotus floridanus

Florida carpenter ant

Cflo\CFLO17184

Harpegnathos saltator

Jerdons jumping ant

Hsal\HSAL13701

Linepithema humile

Argentine ant

Lhum\LH13037

Pogonomyrmex barbatus

Red harvester ant

Pbar\PB21961

Bombyx mori

Silkmoth

Bmor\BGIBMGA000871

Pediculus humanus

Human body louse

Phum\PHUM506520

Tribolium castaneum

Red flour beetle

Tcas\GLEAN_07583

Orthologs in non-Insect Arthropods (EOG6905RQ)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Daphnia pulex

Water flea

Dpux\FGF1

Ixodes scapularis

Deer tick

Isca\ISCW005556

Orthologs in non-Arthropod Metazoa (None identified)

No non-Arthropod Metazoa orthologies identified

Human Orthologs (0)

Gene

OMIM

HGNC

AAA Orthologs (22) based on analysis using Dmel annotation version 4.3

Organism

Gene

Drosophila simulans

Drosophila simulans

Drosophila sechellia

Drosophila sechellia

Drosophila erecta

Drosophila erecta

Drosophila yakuba

Drosophila yakuba

Drosophila ananassae

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA12304

Drosophila pseudoobscura pseudoobscura

Dpse\GA15723

Drosophila persimilis

Dper\GL25899

Drosophila persimilis

Dper\GL25921

Drosophila willistoni

Dwil\GK17409

Drosophila willistoni

Dwil\GK17413

Drosophila virilis

Dvir\GJ11616

Drosophila virilis

Dvir\GJ11619

Drosophila mojavensis

Dmoj\GI11361

Drosophila mojavensis

Dmoj\GI11364

Drosophila grimshawi

Dgri\GH16675

Drosophila grimshawi

Dgri\GH16678

Stocks & Reagents

Stocks Listed in FlyBase ( 16 )

Bloomington

12617

w¹¹¹⁸; P{GT1}Sytβ^BG02150

23780

w¹¹¹⁸; Mi{ET1}Sytβ^MB02011

29917

w¹¹¹⁸; Mi{ET1}Sytβ^MB11464

27293

y¹ v¹; P{TRiP.JF02593}attP2

30987

y¹ w^*; Mi{MIC}Sytβ^MI00405

40764

y¹ w^*; Mi{MIC}Sytβ^MI03867

VDRC

v103345

P{KK112946}VIE-260B

v106559

P{KK112599}VIE-260B

v9221

w¹¹¹⁸; P{GD3879}v9221

v30013

w¹¹¹⁸; P{GD14882}v30013

v43322

w¹¹¹⁸; P{GD15755}v43322

v43321

w¹¹¹⁸; P{GD15755}v43321/TM3

More stocks available...

Genomic Clones ( 2 )

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones ( 32 )

Please Note

This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA Clones, Fully Sequenced

BDGP DGC clones

Other clones

FI17803

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi & Array Information

Linkouts

DRSC - Results from RNAi screens.

•

FBgn0261090

GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents

•

39630

Antibody Information

Other Information

Discoverer

Etymology

Identification

Relationship to Other Genes

Source for database identity of

Source for database merge of

Source for merge of: CG13462 CG3020

(FlyBase Genome Annotators, 2008)

Source for merge of: sytβ CG42333

(Adolfsen et al., 2004)

Source for merge of: Sytβ SytV

(Littleton, 2009.6.7)

Additional comments

Annotations CG13462 and CG3020 merged as CG42333 in release 5.9 of the genome annotation.

(FlyBase Genome Annotators, 2008)

Other Comments

dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R⁺ cell morphology.

(Kiger et al., 2003)

External Crossreferences & Linkouts

Sequence Crossreferences

RefSeq (Transcripts)

•

RefSeq (Proteins)

•

DDBJ / EMBL / GenBank

•

Entrez Gene - A searchable database of RefSeq genes.

•

39630

UniProtKB/TrEMBL

•

Other Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

C2 calcium/lipid-binding domain, CaLB (IPR008973)

Synaptotagmin (IPR001565)

C2 calcium-dependent membrane targeting (IPR000008)

C2 membrane targeting protein (IPR018029)

Linkouts

BioGRID - A database of protein and genetic interactions

•

64954

DroID - A comprehensive database of gene and protein interactions.

•

FBgn0261090

DRSC - Results from RNAi screens.

•

FBgn0261090

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0261090

FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans

•

FBgn0261090

GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents

•

39630

InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.

•

39630

modMine - Data generated by the modENCODE project.

•

FBgn0261090

Synonyms & Secondary IDs ( 15 )

Reported As

Symbol Synonym

CG3020

(Littleton, 2009.6.7, Keleman et al., 2009.8.5)

CG13462

(Keleman et al., 2009.8.5)

CG42333

(Littleton, 2009.6.7, FlyBase Genome Annotators, 2008, Perkins et al., 2009.8.10, Ni et al., 2010.12.1)

dsytβ

(Adolfsen et al., 2004)

Syt13

(Craxton, 2010)

syt13

(Craxton, 2004)

Syt beta

(Littleton, 2009.6.7)

Syt V

(Littleton, 2009.6.7)

SytV

sytβ

Syt β

(Adolfsen et al., 2004)

Sytβ

(Reis et al., 2010, Tan et al., 2012)

unnamed

(Craxton, 2001)

Name Synonym

CG3020

CG13462

CG42333

(FlyBase Genome Annotators, 2008, )

Synaptotagmin V

(Littleton, 2000, Littleton, 2009.6.7)

Synaptotagmin β

(Tan et al., 2012)

sytβ

Secondary FlyBase IDs

FBgn0036464
FBgn0040807
FBgn0044815
FBgn0084189
FBgn0259235
FBgn0261088

References ( 33 )

Generate a list of

All references relating to this gene ( 33 )

List References by type

Research paper ( 8 )
Supplementary material ( 4 )
Personal communication to FlyBase ( 16 )
FlyBase analysis ( 3 )
Letter ( 1 )
Curated genome annotation ( 1 )

Recent research papers ( 1 )

Tan et al., 2012, PLoS Genet. 8(5): e1002681: MicroRNA-277 Modulates the Neurodegeneration Caused by Fragile X Premutation rCGG Repeats. [FBrf0218227]

Show all research papers ...