A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\Prp19

General Information
SymbolDmel\Prp19SpeciesD. melanogaster
NamePrp19Annotation symbolCG5519
Feature typeprotein_coding_geneFlyBase IDFBgn0261119
Gene Model StatusCurrent Stock availability 7 publicly available
Also Known Asl(2)07838
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map55D1-55C9Sequence location2R:14,334,860..14,338,545 [-]

Genomic Maps

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modENCODE GBrowse
detailed view
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Automatically generated summary

See sections below for more information
The gene Prp19 is referred to in FlyBase by the symbol Dmel\Prp19 (CG5519, FBgn0261119). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: ubiquitin-protein ligase activity. Based on sequence similarity, it is predicted to be involved in the biological process: nuclear mRNA splicing, via spliceosome. 5 alleles are reported. The phenotype of these alleles is annotated with: crystal cell. It has one annotated transcript and one annotated polypeptide. Protein features are: G-protein beta WD-40 repeat; Pre-mRNA-splicing factor 19; Quinonprotein alcohol dehydrogenase-like; U box domain; WD40 repeat; WD40 repeat 2; WD40 repeat, conserved site; WD40 repeat, subgroup; WD40 repeat-like-containing domain; WD40-repeat-containing domain; WD40/YVTN repeat-like-containing domain; Zinc finger, RING/FYVE/PHD-type. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1622980_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Prp19. Gene sequence location is 2R:14334860..14338545.

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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
55D1-55C9  
Left limit from in situ hybridisation (FBrf0067338) Right limit from in situ hybridisation (FBrf0067338); Limits computationally determined from genome sequence between P{lacW}l(2)08770k04808 and P{EP}EP437  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
55D1-55D2  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Prp19 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0086693 FBtr0299806 FBtr0086694 FBtr0299805 FBtr0086723 FBtr0086696 FBtr0086722 FBpp0289083 FBpp0085873 FBpp0289084 FBpp0085902 FBpp0085875 FBpp0085901 FBti0125277_2 FBti0125277_1 FBti0041475 FBti0124362
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0086723
  1762
  505
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0085902  
55.2  
505  
6.90  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view CG30120-RB CG5189-RA CG5189-RB Prp19-RA CG5190-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0261119


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0261119
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0261119 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 8525
embryo 02-04hr
 
 13008
embryo 04-06hr
 
 10948
embryo 06-08hr
 
 10015
embryo 08-10hr
 
 7603
embryo 10-12hr
 
 5754
embryo 12-14hr
 
 4171
embryo 14-16hr
 
 4853
embryo 16-18hr
 
 3037
embryo 18-20hr
 
 1761
embryo 20-22hr
 
 2861
embryo 22-24hr
 
 2536
larva L1
 
 3204
larva L2
 
 2541
larva L3 12hr old
 
 1851
larva L3 puffstage 1-2
 
 1644
larva L3 puffstage 3-6
 
 2182
larva L3 puffstage 7-9
 
 2285
white prepupae new
 
 2278
white prepupae 12hr
 
 2435
white prepupae 24hr
 
 2651
pupae 2d postWPP
 
 1636
pupae 3d postWPP
 
 770
pupae 4d postWPP
 
 895
adult male 01day
 
 780
adult male 05day
 
 983
adult male 30day
 
 1081
adult female 01day
 
 3159
adult female 05day
 
 4320
adult female 30day
 
 4455
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (8525)
embryo 02-04hr
 (13008)
embryo 04-06hr
 (10948)
embryo 06-08hr
 (10015)
embryo 08-10hr
 (7603)
embryo 10-12hr
 (5754)
embryo 12-14hr
 (4171)
embryo 14-16hr
 (4853)
embryo 16-18hr
 (3037)
embryo 18-20hr
 (1761)
embryo 20-22hr
 (2861)
embryo 22-24hr
 (2536)
larva L1
 (3204)
larva L2
 (2541)
larva L3 12hr old
 (1851)
larva L3 puffstage 1-2
 (1644)
larva L3 puffstage 3-6
 (2182)
larva L3 puffstage 7-9
 (2285)
white prepupae new
 (2278)
white prepupae 12hr
 (2435)
white prepupae 24hr
 (2651)
pupae 2d postWPP
 (1636)
pupae 3d postWPP
 (770)
pupae 4d postWPP
 (895)
adult male 01day
 (780)
adult male 05day
 (983)
adult male 30day
 (1081)
adult female 01day
 (3159)
adult female 05day
 (4320)
adult female 30day
 (4455)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (8525)
embryo 02-04hr
 (13008)
embryo 04-06hr
 (10948)
embryo 06-08hr
 (10015)
embryo 08-10hr
 (7603)
embryo 10-12hr
 (5754)
embryo 12-14hr
 (4171)
embryo 14-16hr
 (4853)
embryo 16-18hr
 (3037)
embryo 18-20hr
 (1761)
embryo 20-22hr
 (2861)
embryo 22-24hr
 (2536)
larva L1
 (3204)
larva L2
 (2541)
larva L3 12hr old
 (1851)
larva L3 puffstage 1-2
 (1644)
larva L3 puffstage 3-6
 (2182)
larva L3 puffstage 7-9
 (2285)
white prepupae new
 (2278)
white prepupae 12hr
 (2435)
white prepupae 24hr
 (2651)
pupae 2d postWPP
 (1636)
pupae 3d postWPP
 
 770
pupae 4d postWPP
 
 895
adult male 01day
 
 780
adult male 05day
 
 983
adult male 30day
 
 1081
adult female 01day
 (3159)
adult female 05day
 (4320)
adult female 30day
 (4455)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 8525
embryo 02-04hr
 (13008)
embryo 04-06hr
 (10948)
embryo 06-08hr
 10015
embryo 08-10hr
 
 7603
embryo 10-12hr
 
 5754
embryo 12-14hr
 
 4171
embryo 14-16hr
 
 4853
embryo 16-18hr
 
 3037
embryo 18-20hr
 
 1761
embryo 20-22hr
 
 2861
embryo 22-24hr
 
 2536
larva L1
 
 3204
larva L2
 
 2541
larva L3 12hr old
 
 1851
larva L3 puffstage 1-2
 
 1644
larva L3 puffstage 3-6
 
 2182
larva L3 puffstage 7-9
 
 2285
white prepupae new
 
 2278
white prepupae 12hr
 
 2435
white prepupae 24hr
 
 2651
pupae 2d postWPP
 
 1636
pupae 3d postWPP
 
 770
pupae 4d postWPP
 
 895
adult male 01day
 
 780
adult male 05day
 
 983
adult male 30day
 
 1081
adult female 01day
 
 3159
adult female 05day
 
 4320
adult female 30day
 
 4455
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 8525
embryo 02-04hr
 
 13008
embryo 04-06hr
 
 10948
embryo 06-08hr
 
 10015
embryo 08-10hr
 
 7603
embryo 10-12hr
 
 5754
embryo 12-14hr
 
 4171
embryo 14-16hr
 
 4853
embryo 16-18hr
 
 3037
embryo 18-20hr
 
 1761
embryo 20-22hr
 
 2861
embryo 22-24hr
 
 2536
larva L1
 
 3204
larva L2
 
 2541
larva L3 12hr old
 
 1851
larva L3 puffstage 1-2
 
 1644
larva L3 puffstage 3-6
 
 2182
larva L3 puffstage 7-9
 
 2285
white prepupae new
 
 2278
white prepupae 12hr
 
 2435
white prepupae 24hr
 
 2651
pupae 2d postWPP
 
 1636
pupae 3d postWPP
 
 770
pupae 4d postWPP
 
 895
adult male 01day
 
 780
adult male 05day
 
 983
adult male 30day
 
 1081
adult female 01day
 
 3159
adult female 05day
 
 4320
adult female 30day
 
 4455
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0261119 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 8525
embryo 02-04hr
 
 13008
embryo 04-06hr
 
 10948
embryo 06-08hr
 
 10015
embryo 08-10hr
 
 7603
embryo 10-12hr
 
 5754
embryo 12-14hr
 
 4171
embryo 14-16hr
 
 4853
embryo 16-18hr
 
 3037
embryo 18-20hr
 
 1761
embryo 20-22hr
 
 2861
embryo 22-24hr
 
 2536
larva L1
 
 3204
larva L2
 
 2541
larva L3 12hr old
 
 1851
larva L3 puffstage 1-2
 
 1644
larva L3 puffstage 3-6
 
 2182
larva L3 puffstage 7-9
 
 2285
white prepupae new
 
 2278
white prepupae 12hr
 
 2435
white prepupae 24hr
 
 2651
pupae 2d postWPP
 
 1636
pupae 3d postWPP
 
 770
pupae 4d postWPP
 
 895
adult male 01day
 
 780
adult male 05day
 
 983
adult male 30day
 
 1081
adult female 01day
 
 3159
adult female 05day
 
 4320
adult female 30day
 
 4455
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (8525)
embryo 02-04hr
 (13008)
embryo 04-06hr
 (10948)
embryo 06-08hr
 (10015)
embryo 08-10hr
 (7603)
embryo 10-12hr
 (5754)
embryo 12-14hr
 (4171)
embryo 14-16hr
 (4853)
embryo 16-18hr
 (3037)
embryo 18-20hr
 (1761)
embryo 20-22hr
 (2861)
embryo 22-24hr
 (2536)
larva L1
 (3204)
larva L2
 (2541)
larva L3 12hr old
 (1851)
larva L3 puffstage 1-2
 (1644)
larva L3 puffstage 3-6
 (2182)
larva L3 puffstage 7-9
 (2285)
white prepupae new
 (2278)
white prepupae 12hr
 (2435)
white prepupae 24hr
 (2651)
pupae 2d postWPP
 (1636)
pupae 3d postWPP
 (770)
pupae 4d postWPP
 (895)
adult male 01day
 (780)
adult male 05day
 (983)
adult male 30day
 (1081)
adult female 01day
 (3159)
adult female 05day
 (4320)
adult female 30day
 (4455)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (8525)
embryo 02-04hr
 (13008)
embryo 04-06hr
 (10948)
embryo 06-08hr
 (10015)
embryo 08-10hr
 (7603)
embryo 10-12hr
 (5754)
embryo 12-14hr
 (4171)
embryo 14-16hr
 (4853)
embryo 16-18hr
 (3037)
embryo 18-20hr
 1761
embryo 20-22hr
 (2861)
embryo 22-24hr
 (2536)
larva L1
 (3204)
larva L2
 (2541)
larva L3 12hr old
 1851
larva L3 puffstage 1-2
 1644
larva L3 puffstage 3-6
 2182
larva L3 puffstage 7-9
 2285
white prepupae new
 2278
white prepupae 12hr
 2435
white prepupae 24hr
 (2651)
pupae 2d postWPP
 1636
pupae 3d postWPP
 
 770
pupae 4d postWPP
 
 895
adult male 01day
 
 780
adult male 05day
 
 983
adult male 30day
 
 1081
adult female 01day
 (3159)
adult female 05day
 (4320)
adult female 30day
 (4455)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 8525
embryo 02-04hr
 13008
embryo 04-06hr
 10948
embryo 06-08hr
 10015
embryo 08-10hr
 
 7603
embryo 10-12hr
 
 5754
embryo 12-14hr
 
 4171
embryo 14-16hr
 
 4853
embryo 16-18hr
 
 3037
embryo 18-20hr
 
 1761
embryo 20-22hr
 
 2861
embryo 22-24hr
 
 2536
larva L1
 
 3204
larva L2
 
 2541
larva L3 12hr old
 
 1851
larva L3 puffstage 1-2
 
 1644
larva L3 puffstage 3-6
 
 2182
larva L3 puffstage 7-9
 
 2285
white prepupae new
 
 2278
white prepupae 12hr
 
 2435
white prepupae 24hr
 
 2651
pupae 2d postWPP
 
 1636
pupae 3d postWPP
 
 770
pupae 4d postWPP
 
 895
adult male 01day
 
 780
adult male 05day
 
 983
adult male 30day
 
 1081
adult female 01day
 
 3159
adult female 05day
 
 4320
adult female 30day
 
 4455
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 8525
embryo 02-04hr
 
 13008
embryo 04-06hr
 
 10948
embryo 06-08hr
 
 10015
embryo 08-10hr
 
 7603
embryo 10-12hr
 
 5754
embryo 12-14hr
 
 4171
embryo 14-16hr
 
 4853
embryo 16-18hr
 
 3037
embryo 18-20hr
 
 1761
embryo 20-22hr
 
 2861
embryo 22-24hr
 
 2536
larva L1
 
 3204
larva L2
 
 2541
larva L3 12hr old
 
 1851
larva L3 puffstage 1-2
 
 1644
larva L3 puffstage 3-6
 
 2182
larva L3 puffstage 7-9
 
 2285
white prepupae new
 
 2278
white prepupae 12hr
 
 2435
white prepupae 24hr
 
 2651
pupae 2d postWPP
 
 1636
pupae 3d postWPP
 
 770
pupae 4d postWPP
 
 895
adult male 01day
 
 780
adult male 05day
 
 983
adult male 30day
 
 1081
adult female 01day
 
 3159
adult female 05day
 
 4320
adult female 30day
 
 4455
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0261119


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0261119
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0261119 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 466.925
Larval Midgut
 
 88.7
Larval Hindgut
 
 156.2
Larval Malpighian Tubules
 
 151.3
Larval Fat Body
 
 117.5
Larval Salivary Gland
 
 299.1
Larval Trachea
 
 211.85
Larval Carcass
 
 180.75
Adult Head
 
 119.7
Adult Eye
 
 87.9
Adult Brain
 
 164.7
Adult Thoracic-Abdominal Ganglion
 
 151
Adult Crop
 
 149
Adult Midgut
 
 144.5
Adult Hindgut
 
 127.8
Adult Malpighian Tubules
 
 131.5
Adult Fat Body
 
 102.8
Adult Salivary Gland
 
 147
Adult Heart
 
 82.875
Adult VirginFemale Spermatheca
 
 154.2
Adult InseminatedFemale Spermatheca
 
 177.9
Adult Ovary
 
 452.2
Adult Testis
 
 46.7
Adult Male Accessory Gland
 
 241.5
Adult Carcass
 
 106.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 466.925
Larval Midgut
 
 88.7
Larval Hindgut
 
 156.2
Larval Malpighian Tubules
 
 151.3
Larval Fat Body
 
 117.5
Larval Salivary Gland
 
 299.1
Larval Trachea
 
 211.85
Larval Carcass
 
 180.75
Adult Head
 
 119.7
Adult Eye
 
 87.9
Adult Brain
 
 164.7
Adult Thoracic-Abdominal Ganglion
 
 151
Adult Crop
 
 149
Adult Midgut
 
 144.5
Adult Hindgut
 
 127.8
Adult Malpighian Tubules
 
 131.5
Adult Fat Body
 
 102.8
Adult Salivary Gland
 
 147
Adult Heart
 
 82.875
Adult VirginFemale Spermatheca
 
 154.2
Adult InseminatedFemale Spermatheca
 
 177.9
Adult Ovary
 
 452.2
Adult Testis
 
 46.7
Adult Male Accessory Gland
 
 241.5
Adult Carcass
 
 106.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 466.925
Larval Midgut
 
 88.7
Larval Hindgut
 
 156.2
Larval Malpighian Tubules
 
 151.3
Larval Fat Body
 
 117.5
Larval Salivary Gland
 
 299.1
Larval Trachea
 
 211.85
Larval Carcass
 
 180.75
Adult Head
 
 119.7
Adult Eye
 
 87.9
Adult Brain
 
 164.7
Adult Thoracic-Abdominal Ganglion
 
 151
Adult Crop
 
 149
Adult Midgut
 
 144.5
Adult Hindgut
 
 127.8
Adult Malpighian Tubules
 
 131.5
Adult Fat Body
 
 102.8
Adult Salivary Gland
 
 147
Adult Heart
 
 82.875
Adult VirginFemale Spermatheca
 
 154.2
Adult InseminatedFemale Spermatheca
 
 177.9
Adult Ovary
 
 452.2
Adult Testis
 
 46.7
Adult Male Accessory Gland
 
 241.5
Adult Carcass
 
 106.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 466.925
Larval Midgut
 
 88.7
Larval Hindgut
 
 156.2
Larval Malpighian Tubules
 
 151.3
Larval Fat Body
 
 117.5
Larval Salivary Gland
 
 299.1
Larval Trachea
 
 211.85
Larval Carcass
 
 180.75
Adult Head
 
 119.7
Adult Eye
 
 87.9
Adult Brain
 
 164.7
Adult Thoracic-Abdominal Ganglion
 
 151
Adult Crop
 
 149
Adult Midgut
 
 144.5
Adult Hindgut
 
 127.8
Adult Malpighian Tubules
 
 131.5
Adult Fat Body
 
 102.8
Adult Salivary Gland
 
 147
Adult Heart
 
 82.875
Adult VirginFemale Spermatheca
 
 154.2
Adult InseminatedFemale Spermatheca
 
 177.9
Adult Ovary
 
 452.2
Adult Testis
 
 46.7
Adult Male Accessory Gland
 
 241.5
Adult Carcass
 
 106.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0261119 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 466.925
Larval Midgut
 
 88.7
Larval Hindgut
 
 156.2
Larval Malpighian Tubules
 
 151.3
Larval Fat Body
 
 117.5
Larval Salivary Gland
 
 299.1
Larval Trachea
 
 211.85
Larval Carcass
 
 180.75
Adult Head
 
 119.7
Adult Eye
 
 87.9
Adult Brain
 
 164.7
Adult Thoracic-Abdominal Ganglion
 
 151
Adult Crop
 
 149
Adult Midgut
 
 144.5
Adult Hindgut
 
 127.8
Adult Malpighian Tubules
 
 131.5
Adult Fat Body
 
 102.8
Adult Salivary Gland
 
 147
Adult Heart
 
 82.875
Adult VirginFemale Spermatheca
 
 154.2
Adult InseminatedFemale Spermatheca
 
 177.9
Adult Ovary
 
 452.2
Adult Testis
 
 46.7
Adult Male Accessory Gland
 
 241.5
Adult Carcass
 
 106.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 466.925
Larval Midgut
 
 88.7
Larval Hindgut
 
 156.2
Larval Malpighian Tubules
 
 151.3
Larval Fat Body
 
 117.5
Larval Salivary Gland
 
 299.1
Larval Trachea
 
 211.85
Larval Carcass
 
 180.75
Adult Head
 
 119.7
Adult Eye
 
 87.9
Adult Brain
 
 164.7
Adult Thoracic-Abdominal Ganglion
 
 151
Adult Crop
 
 149
Adult Midgut
 
 144.5
Adult Hindgut
 
 127.8
Adult Malpighian Tubules
 
 131.5
Adult Fat Body
 
 102.8
Adult Salivary Gland
 
 147
Adult Heart
 
 82.875
Adult VirginFemale Spermatheca
 
 154.2
Adult InseminatedFemale Spermatheca
 
 177.9
Adult Ovary
 
 452.2
Adult Testis
 
 46.7
Adult Male Accessory Gland
 
 241.5
Adult Carcass
 
 106.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 466.925
Larval Midgut
 
 88.7
Larval Hindgut
 
 156.2
Larval Malpighian Tubules
 
 151.3
Larval Fat Body
 
 117.5
Larval Salivary Gland
 
 299.1
Larval Trachea
 
 211.85
Larval Carcass
 
 180.75
Adult Head
 
 119.7
Adult Eye
 
 87.9
Adult Brain
 
 164.7
Adult Thoracic-Abdominal Ganglion
 
 151
Adult Crop
 
 149
Adult Midgut
 
 144.5
Adult Hindgut
 
 127.8
Adult Malpighian Tubules
 
 131.5
Adult Fat Body
 
 102.8
Adult Salivary Gland
 
 147
Adult Heart
 
 82.875
Adult VirginFemale Spermatheca
 
 154.2
Adult InseminatedFemale Spermatheca
 
 177.9
Adult Ovary
 
 452.2
Adult Testis
 
 46.7
Adult Male Accessory Gland
 
 241.5
Adult Carcass
 
 106.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 466.925
Larval Midgut
 
 88.7
Larval Hindgut
 
 156.2
Larval Malpighian Tubules
 
 151.3
Larval Fat Body
 
 117.5
Larval Salivary Gland
 
 299.1
Larval Trachea
 
 211.85
Larval Carcass
 
 180.75
Adult Head
 
 119.7
Adult Eye
 
 87.9
Adult Brain
 
 164.7
Adult Thoracic-Abdominal Ganglion
 
 151
Adult Crop
 
 149
Adult Midgut
 
 144.5
Adult Hindgut
 
 127.8
Adult Malpighian Tubules
 
 131.5
Adult Fat Body
 
 102.8
Adult Salivary Gland
 
 147
Adult Heart
 
 82.875
Adult VirginFemale Spermatheca
 
 154.2
Adult InseminatedFemale Spermatheca
 
 177.9
Adult Ovary
 
 452.2
Adult Testis
 
 46.7
Adult Male Accessory Gland
 
 241.5
Adult Carcass
 
 106.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 119.7
 
NA 
Eye
 
 87.9
 
NA 
Brain
 
 164.7
 
466.925 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 151
 
NA 
Crop
 
 149
 
88.7 
Midgut
 
 144.5
 
156.2 
Hindgut
 
 127.8
 
151.3 
Malpighian Tubules
 
 131.5
 
117.5 
Fat Body
 
 102.8
 
299.1 
Salivary Gland
 
 147
 
NA 
Heart
 
 82.875
 
211.85 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 154.2
 
NA 
InseminatedFemale Spermatheca
 
 177.9
 
NA 
Ovary
 
 452.2
 
NA 
Testis
 
 46.7
 
NA 
Male Accessory Gland
 
 241.5
 
180.75 
Carcass
 
 106.5

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
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Allele of Prp19ClassMutagenStocksKnown lesion
Prp19078381 --
Prp19G30801 --
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Allele of Prp19ClassMutagenStocksKnown lesion
Prp19GD116813 Yes
Prp19HMS006521 Yes
Prp19KK1013351 Yes
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Transgenic Constructs
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Type of insertions
Name
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insertion of enhancer trap
insertion of mobile activating element
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inferred by curator from GO:0071011|GO:0071013
inferred from sequence or structural similarity
traceable author statement
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inferred from sequence or structural similarity
traceable author statement
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Please look at the allele data for full details of the genetic interactions
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Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
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Source for database identity of
Source for database merge of
Source for merge of: Gbp BcDNA:LD02793
Source for merge of: Prp19 CG5519
Additional comments
There is no evidence that CG5519 encodes a GTP binding protein. FBrf0122136 seems to have mis-identified it as a G-protein, based only on the fact that it has WD40 repeats. For these reasons, the FlyBase symbol/name for this gene has reverted from 'Gbp/GTP-binding-protein' to CG5519.
Source for merge of Gbp BcDNA:LD02793 was sequence comparison (date:000202).
Identified only as a PCR sequence; identity to other GTP binding protein encoding genes unknown.
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InParanoid A subset of ortholog calls from InParanoid.
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hide Synonyms & Secondary IDs ( 8 )
Reported As
Symbol Synonym
BcDNA:LD02793
 
Name Synonym
GTP-binding regulatory protein beta chain
Prp19
 
Secondary FlyBase IDs
  • FBgn0010644
  • FBgn0013969
  • FBgn0027900
hide References ( 27 )
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hide Recent research papers ( 3 )
O'Keefe et al., 2011, Hum. Mol. Genet. 20(3): 497--509
Drosophila orthologue of WWOX, the chromosomal fragile site FRA16D tumour suppressor gene, functions in aerobic metabolism and regulates reactive oxygen species. [FBrf0212691]
Avet-Rochex et al., 2010, BMC Dev. Biol. 10: 65
An in vivo RNA interference screen identifies gene networks controlling Drosophila melanogaster blood cell homeostasis. [FBrf0211137]
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]