Please see the JBrowse view of Dmel\CG42674 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene merge based on EST/cDNA data.
Low-frequency RNA-Seq exon junction(s) not annotated.
Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.
Gene model reviewed during 5.45
The group(s) of polypeptides indicated below share identical sequence to each other.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\CG42674 using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: maternally deposited
Expression in stage P3 pupal leg discs is ubiquitous.
JBrowse - Visual display of RNA-Seq signals
View Dmel\CG42674 in JBrowse3-47
3-43.5
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
RNAi screen using dsRNA made from templates generated with primers directed against this gene causes a phenotype when assayed in S2R+ cells: cells become round and detached. Kc167 cells are unaffected.
Annotation CG13812 renamed CG32223 in release 3 of the genome annotation.
Source for merge of: CG13811 CG7323
Source for merge of: CG32223 CG42348
Source for merge of: CG13812 CG32223
l(3)s2253 may correspond to CG42674: the P{lacW}l(3)s2253s2253 insertion maps within the transcription unit.
Annotations CG32223 and CG42348 merged as CG42674 in release 5.25 of the genome annotation.
Annotations CG13811 and CG7323 merged as CG42348 in release 5.9 of the genome annotation.
Source for merge of CG13812 CG32223 was a shared cDNA ( date:030728 ).