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Gene Dmel\CG42675

General Information
Symbol	Dmel\CG42675	Species	D. melanogaster
Name		Annotation symbol	CG42675
Feature type	protein_coding_gene	FlyBase ID	FBgn0261561
Gene Model Status	Current	Stock availability	4 publicly available
Also Known As	CG10999
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	83C4-83C4	Sequence location	3R:1,639,544..1,644,545 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG42675 (FBgn0261561). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed during late pupal stages, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at high levels in the following post-embryonic organs or tissues: adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: larval fat body, larval/adult salivary gland, larval trachea, adult male accessory gland, larval carcass. Gene sequence location is 3R:1639544..1644545.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	Sequence features HFA12157 BKN51367 BKN51169 BKN30927 BKN21985
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 83C4-83C4   Limits computationally determined from genome sequence between P{lacW}casj1C2 and P{PZ}lab01241
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG42675 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene merge based on EST/cDNA data.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG42675-RB FBtr0302724  NM_141336   1688   383 CG42675-RC FBtr0302725  NM_169109   1765   383 CG42675-RD FBtr0302726  NM_169111   644   187 CG42675-RE FBtr0302727  NM_001202251   1477   412 CG42675-RF FBtr0303165  NM_001202252   1621   383
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG42675-PB   FBpp0291864   42.5   383   11.83     NP_649593   AAF51947 CG42675-PC   FBpp0291865   42.5   383   11.83     NP_731012   AAN14325 CG42675-PD   FBpp0291866   21.1   187   10.92     NP_731014   AAN14327 CG42675-PE   FBpp0291867   45.8   412   11.97     NP_001189180   ADV37271 CG42675-PF   FBpp0292264   42.5   383   11.83     NP_001189181   ADV37272
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF51947   AE014297 AAN14325   AE014297 AAN14327   AE014297 ADV37271   AE014297 ADV37272   AI107588   AI388079   AI405541   AI516959   AI946920   AX154898   AY094720 AAM11073   BE977274   BE977695   BF485783   BF487016   BF487617   BF490059   BF492203   BF492228   BF493340   BF493633   BF495735   BF495961   BF499802   BF500915   BF502866   BF503408   BF504203   BF504786   BG632232   BG633829   BI590111   BI619769   BT001256 AAN71012   BT088966   BT100016   CK135513   CZ479769
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8IPQ7 Q8SXA7 Q9VNI7 Q8IPQ8
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0261561    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0261561 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed during late pupal stages, in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0261561 expression level Developmental Stage   Expression Level embryo 00-02hr    6 embryo 02-04hr    12 embryo 04-06hr    13 embryo 06-08hr    18 embryo 08-10hr    23 embryo 10-12hr    26 embryo 12-14hr    19 embryo 14-16hr    63 embryo 16-18hr    283 embryo 18-20hr    798 embryo 20-22hr    303 embryo 22-24hr    322 larva L1    260 larva L2    286 larva L3 12hr old    610 larva L3 puffstage 1-2    783 larva L3 puffstage 3-6    1414 larva L3 puffstage 7-9    1502 white prepupae new    2603 white prepupae 12hr    2045 white prepupae 24hr    3119 pupae 2d postWPP    3459 pupae 3d postWPP    3625 pupae 4d postWPP    4959 adult male 01day    5820 adult male 05day    7468 adult male 30day    7677 adult female 01day    337 adult female 05day    68 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    6 embryo 02-04hr    12 embryo 04-06hr    13 embryo 06-08hr    18 embryo 08-10hr    23 embryo 10-12hr    26 embryo 12-14hr    19 embryo 14-16hr    63 embryo 16-18hr  (283) embryo 18-20hr  (798) embryo 20-22hr  (303) embryo 22-24hr  (322) larva L1  (260) larva L2  (286) larva L3 12hr old  (610) larva L3 puffstage 1-2  (783) larva L3 puffstage 3-6  (1414) larva L3 puffstage 7-9  (1502) white prepupae new  (2603) white prepupae 12hr  (2045) white prepupae 24hr  (3119) pupae 2d postWPP  (3459) pupae 3d postWPP  (3625) pupae 4d postWPP  (4959) adult male 01day  (5820) adult male 05day  (7468) adult male 30day  (7677) adult female 01day  (337) adult female 05day    68 adult female 30day  (117) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    6 embryo 02-04hr    12 embryo 04-06hr    13 embryo 06-08hr    18 embryo 08-10hr    23 embryo 10-12hr    26 embryo 12-14hr    19 embryo 14-16hr    63 embryo 16-18hr    283 embryo 18-20hr    798 embryo 20-22hr    303 embryo 22-24hr    322 larva L1    260 larva L2    286 larva L3 12hr old    610 larva L3 puffstage 1-2    783 larva L3 puffstage 3-6  1414 larva L3 puffstage 7-9  1502 white prepupae new  (2603) white prepupae 12hr  (2045) white prepupae 24hr  (3119) pupae 2d postWPP  (3459) pupae 3d postWPP  (3625) pupae 4d postWPP  (4959) adult male 01day  (5820) adult male 05day  (7468) adult male 30day  (7677) adult female 01day    337 adult female 05day    68 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    6 embryo 02-04hr    12 embryo 04-06hr    13 embryo 06-08hr    18 embryo 08-10hr    23 embryo 10-12hr    26 embryo 12-14hr    19 embryo 14-16hr    63 embryo 16-18hr    283 embryo 18-20hr    798 embryo 20-22hr    303 embryo 22-24hr    322 larva L1    260 larva L2    286 larva L3 12hr old    610 larva L3 puffstage 1-2    783 larva L3 puffstage 3-6    1414 larva L3 puffstage 7-9    1502 white prepupae new    2603 white prepupae 12hr    2045 white prepupae 24hr    3119 pupae 2d postWPP    3459 pupae 3d postWPP    3625 pupae 4d postWPP    4959 adult male 01day    5820 adult male 05day    7468 adult male 30day    7677 adult female 01day    337 adult female 05day    68 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    6 embryo 02-04hr    12 embryo 04-06hr    13 embryo 06-08hr    18 embryo 08-10hr    23 embryo 10-12hr    26 embryo 12-14hr    19 embryo 14-16hr    63 embryo 16-18hr    283 embryo 18-20hr    798 embryo 20-22hr    303 embryo 22-24hr    322 larva L1    260 larva L2    286 larva L3 12hr old    610 larva L3 puffstage 1-2    783 larva L3 puffstage 3-6    1414 larva L3 puffstage 7-9    1502 white prepupae new    2603 white prepupae 12hr    2045 white prepupae 24hr    3119 pupae 2d postWPP    3459 pupae 3d postWPP    3625 pupae 4d postWPP    4959 adult male 01day    5820 adult male 05day    7468 adult male 30day    7677 adult female 01day    337 adult female 05day    68 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0261561 expression level Developmental Stage   Expression Level embryo 00-02hr    6 embryo 02-04hr    12 embryo 04-06hr    13 embryo 06-08hr    18 embryo 08-10hr    23 embryo 10-12hr    26 embryo 12-14hr    19 embryo 14-16hr    63 embryo 16-18hr    283 embryo 18-20hr    798 embryo 20-22hr    303 embryo 22-24hr    322 larva L1    260 larva L2    286 larva L3 12hr old    610 larva L3 puffstage 1-2    783 larva L3 puffstage 3-6    1414 larva L3 puffstage 7-9    1502 white prepupae new    2603 white prepupae 12hr    2045 white prepupae 24hr    3119 pupae 2d postWPP    3459 pupae 3d postWPP    3625 pupae 4d postWPP    4959 adult male 01day    5820 adult male 05day    7468 adult male 30day    7677 adult female 01day    337 adult female 05day    68 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    6 embryo 02-04hr    12 embryo 04-06hr    13 embryo 06-08hr    18 embryo 08-10hr    23 embryo 10-12hr    26 embryo 12-14hr    19 embryo 14-16hr    63 embryo 16-18hr  (283) embryo 18-20hr  (798) embryo 20-22hr  (303) embryo 22-24hr  (322) larva L1  (260) larva L2  (286) larva L3 12hr old  (610) larva L3 puffstage 1-2  (783) larva L3 puffstage 3-6  (1414) larva L3 puffstage 7-9  (1502) white prepupae new  (2603) white prepupae 12hr  (2045) white prepupae 24hr  (3119) pupae 2d postWPP  (3459) pupae 3d postWPP  (3625) pupae 4d postWPP  (4959) adult male 01day  (5820) adult male 05day  (7468) adult male 30day  (7677) adult female 01day  (337) adult female 05day    68 adult female 30day  117 Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    6 embryo 02-04hr    12 embryo 04-06hr    13 embryo 06-08hr    18 embryo 08-10hr    23 embryo 10-12hr    26 embryo 12-14hr    19 embryo 14-16hr    63 embryo 16-18hr    283 embryo 18-20hr    798 embryo 20-22hr    303 embryo 22-24hr    322 larva L1    260 larva L2    286 larva L3 12hr old    610 larva L3 puffstage 1-2    783 larva L3 puffstage 3-6  1414 larva L3 puffstage 7-9  1502 white prepupae new  (2603) white prepupae 12hr  2045 white prepupae 24hr  (3119) pupae 2d postWPP  (3459) pupae 3d postWPP  (3625) pupae 4d postWPP  (4959) adult male 01day  (5820) adult male 05day  (7468) adult male 30day  (7677) adult female 01day    337 adult female 05day    68 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    6 embryo 02-04hr    12 embryo 04-06hr    13 embryo 06-08hr    18 embryo 08-10hr    23 embryo 10-12hr    26 embryo 12-14hr    19 embryo 14-16hr    63 embryo 16-18hr    283 embryo 18-20hr    798 embryo 20-22hr    303 embryo 22-24hr    322 larva L1    260 larva L2    286 larva L3 12hr old    610 larva L3 puffstage 1-2    783 larva L3 puffstage 3-6    1414 larva L3 puffstage 7-9    1502 white prepupae new    2603 white prepupae 12hr    2045 white prepupae 24hr    3119 pupae 2d postWPP    3459 pupae 3d postWPP    3625 pupae 4d postWPP    4959 adult male 01day    5820 adult male 05day    7468 adult male 30day    7677 adult female 01day    337 adult female 05day    68 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    6 embryo 02-04hr    12 embryo 04-06hr    13 embryo 06-08hr    18 embryo 08-10hr    23 embryo 10-12hr    26 embryo 12-14hr    19 embryo 14-16hr    63 embryo 16-18hr    283 embryo 18-20hr    798 embryo 20-22hr    303 embryo 22-24hr    322 larva L1    260 larva L2    286 larva L3 12hr old    610 larva L3 puffstage 1-2    783 larva L3 puffstage 3-6    1414 larva L3 puffstage 7-9    1502 white prepupae new    2603 white prepupae 12hr    2045 white prepupae 24hr    3119 pupae 2d postWPP    3459 pupae 3d postWPP    3625 pupae 4d postWPP    4959 adult male 01day    5820 adult male 05day    7468 adult male 30day    7677 adult female 01day    337 adult female 05day    68 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0261561    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0261561 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at high levels in the following post-embryonic organs or tissues: adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: larval fat body, larval/adult salivary gland, larval trachea, adult male accessory gland, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut no informative data Larval Malpighian Tubules     Larval Fat Body no informative data Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut     Adult Hindgut no informative data Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary     Adult Testis no informative data Adult Male Accessory Gland no informative data Adult Carcass no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037381
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG42675e01961 viable, with Scer\GAL4pnr-MD237 CG42675GD7165 CG42675GD10296 Sterility Allele fertile CG42675e01961 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG42675 Class Mutagen Stocks Known lesion CG42675e01961 piggyBac transposase 2 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG42675 Class Mutagen Stocks Known lesion CG42675GD10296 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG42675GD7165 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG42675KK101919 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel7284 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{RB}CG42675e01961 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
	There is no information supporting a biological process, cellular component or molecular function term for this gene. (Based on a review of available data before: 2006)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG42675 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0261561 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40722
Orthologs
Genome-wide drosophilid orthologs	Dana\GF16356 Dere\GG13059 Dgri\GH13179 Dmoj\GI22365 Dper\GL24325 Dpse\GA26574 Dsec\GM10844 Dsim\GD19826 Dvir\GJ24399 Dwil\GK22541 Dyak\GE10169
Curated drosophilid orthologs	Dpse\GA10699   Dpse\GA16320
Linkouts	OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB12452 PB12450 NV15176 LH16020 ISCW018917 FBgn0228047 FBgn0224518 FBgn0211479 FBgn0191315 FBgn0165790 JGI_V11_46633 FBgn0247948 FBgn0161915 FBgn0145093 FBgn0120656 FBgn0105332 FBgn0093377 CPIJ008319 BGIBMGA005135 ACYPI003202 GB10476 AGAP004068 AAEL002543 PHUM171060 GLEAN_04275
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	18005 w1118; PBac{RB}CG42675e01961
Harvard	- PBac{RB}CG42675e01961
VDRC	v16171 w1118; P{GD7165}v16171 v21372 w1118; P{GD10296}v21372
Genomic Clones ( 2 )
	BACR02L23 BACR23H21 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 29 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	AT01668 AT06280 GH18838
Other clones	MIP05037
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT01947 AT05514 AT06812 AT09380 AT09655 AT14555 AT16068 AT18707 AT19384 AT19830 AT21675 AT22590 AT26339 AT29095 AT29124 AT29764 GH05342 GH05475 GH25566 GH27569 RH03684
Other clones	bs33a08 bs61g08 bs67h01 RH50876
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0261561 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40722 318798
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG10999 anon-WO0140519.247 (FlyBase, 1996-) Source for merge of: CG10999 CG31554 (FlyBase Genome Annotators, 2010)
Additional comments	Annotations CG10999 and CG31554 merged as CG42675 in release 5.25 of the genome annotation. (FlyBase Genome Annotators, 2010) Source for merge of CG10999 anon-WO0140519.247 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
	New annotation (CG31554) in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_141336 NM_169109 NM_169111 NM_001202251 NM_001202252 RefSeq (Proteins) • NP_649593 NP_731012 NP_731014 NP_001189180 NP_001189181 DDBJ / EMBL / GenBank • AAF51947 AAM11073 AAN14325 AAN14326 AAN14327 AAN71012 ADV37271 ADV37272 AI107588 AI388079 AI946920 AX154898 AY094720 BF493340 BF495735 BI619769 BT001256 CZ479769 Entrez Gene - A searchable database of RefSeq genes. • 40722 318798 UniProtKB/TrEMBL • Q8IPQ7 Q8IPQ8 Q8SXA7 Q9VNI7
Other Crossreferences
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0261561 DRSC - Results from RNAi screens. • FBgn0261561 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037381 FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0261561 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40722 318798 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40722 modMine - Data generated by the modENCODE project. • FBgn0261561 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB12452 PB12450 NV15176 LH16020 ISCW018917 FBgn0228047 FBgn0224518 FBgn0211479 FBgn0191315 FBgn0165790 JGI_V11_46633 FBgn0247948 FBgn0161915 FBgn0145093 FBgn0120656 FBgn0105332 FBgn0093377 CPIJ008319 BGIBMGA005135 ACYPI003202 GB10476 AGAP004068 AAEL002543 PHUM171060 GLEAN_04275
Synonyms & Secondary IDs ( 4 )
Reported As
Symbol Synonym	anon-WO0140519.247   CG10999 (Hollien and Weissman, 2006, Kadener et al., 2007, Keleman et al., 2009.8.5, Pauli et al., 2010) CG31554   CG42675 (FlyBase Genome Annotators, 2010, )
Name Synonym
Secondary FlyBase IDs
	FBgn0037381 FBgn0044622 FBgn0051554
References ( 17 )
Research paper	Pauli et al., 2010, Curr. Biol. 20(20): 1787--1798 A direct role for cohesin in gene regulation and ecdysone response in Drosophila salivary glands. [FBrf0212124] Kadener et al., 2007, Genes Dev. 21(13): 1675--1686 Clockwork Orange is a transcriptional repressor and a new Drosophila circadian pacemaker component. [FBrf0200951]
Supplementary material	Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Hollien and Weissman, 2006, Science 313(5783): [FBrf0199122]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335] Oliver, 2001.8.16, File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). [FBrf0137492]
FlyBase analysis	FlyBase Genome Annotators, 2010, Changes affecting gene model number or type in release 5.25 of the annotated D.melanogaster genome. Changes affecting gene model number or type in release 5.25 of the annotated D.melanogaster genome. [FBrf0209656] FlyBase Genome Annotators, 2002-2003, Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. Changes affecting gene model number or type in releases 3.0 and 3.1 of the annotated D.melanogaster genome. [FBrf0148886] FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Patent	Greenspan, 2001.6.7, World Patent 0140519-A: Methods for identifying modulators for balance related disorders. [FBrf0141245]