A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\RpS10b

General Information
SymbolDmel\RpS10bSpeciesD. melanogaster
NameRibosomal protein S10bAnnotation symbolCG14206
Feature typeprotein_coding_geneFlyBase IDFBgn0261593
Gene Model StatusCurrent Stock availability 5 publicly available
Also Known AsM(1)n
Genomic Location
Chromosome (arm)XRecombination map1-62.7
Cytogenetic map18D3-18D3Sequence locationX:19,492,064..19,493,108 [+]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene Ribosomal protein S10b is referred to in FlyBase by the symbol Dmel\RpS10b (CG14206, FBgn0261593). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: structural constituent of ribosome. The biological processes in which it is involved are not known. 8 alleles are reported. The phenotypes of these alleles are annotated with: macrochaeta; adult abdomen; arista; wing vein. It has 3 annotated transcripts and 3 annotated polypeptides. Protein features are: Plectin/S10, N-terminal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, during early pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1635528_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of RpS10b. Gene sequence location is X:19492064..19493108.

hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
M(1)18C
thumb
M(1)18C1: Minute (1)18C1
Edith M. Wallace, unpublished.
Heterozygous females have Minute bristles. Lethal in males. Viability and fertility low. Pupation delayed about 42 hr at 25 (Brehme). Wing cells smaller than normal (Brehme, 1941, J. Exp. Zool. 88: 135-60). RK2.
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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
References
Controlled Vocabulary Terms
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
18D3-18D3  
Limits computationally determined from genome sequence between P{EP}Tao-1EP1455 and P{EP}EP1348&P{EP}e(y)3EP1036  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
1-62.7
 
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\RpS10b for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0074731 FBtr0074732 FBtr0308192 FBtr0307162 FBtr0074768 FBpp0074501 FBpp0074500 FBpp0300512 FBpp0297991 FBpp0074537 FBti0053727 FBti0015630
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0074731
  743
  160
FBtr0074732
  728
  160
FBtr0308192
 
  764
  160
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0074500  
17.9  
160  
10.30  
FBpp0074501  
17.9  
160  
10.30  
FBpp0300512  
17.9  
160  
10.30  
 
 
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view RpS10b-RB RpS10b-RC RpS10b-RD CG14220-RB
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0261593


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0261593
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, during early pupal stages, in adult female stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0261593 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 118384
embryo 02-04hr
 
 184958
embryo 04-06hr
 
 171578
embryo 06-08hr
 
 189184
embryo 08-10hr
 
 203996
embryo 10-12hr
 
 236920
embryo 12-14hr
 
 141333
embryo 14-16hr
 
 203073
embryo 16-18hr
 
 159849
embryo 18-20hr
 
 179358
embryo 20-22hr
 
 194865
embryo 22-24hr
 
 142946
larva L1
 
 187956
larva L2
 
 160091
larva L3 12hr old
 
 139662
larva L3 puffstage 1-2
 
 125987
larva L3 puffstage 3-6
 
 119856
larva L3 puffstage 7-9
 
 120613
white prepupae new
 
 111910
white prepupae 12hr
 
 91589
white prepupae 24hr
 
 87500
pupae 2d postWPP
 
 74002
pupae 3d postWPP
 
 66342
pupae 4d postWPP
 
 77901
adult male 01day
 
 58574
adult male 05day
 
 59121
adult male 30day
 
 70899
adult female 01day
 
 134347
adult female 05day
 
 118658
adult female 30day
 
 126495
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (118384)
embryo 02-04hr
 (184958)
embryo 04-06hr
 (171578)
embryo 06-08hr
 (189184)
embryo 08-10hr
 (203996)
embryo 10-12hr
 (236920)
embryo 12-14hr
 (141333)
embryo 14-16hr
 (203073)
embryo 16-18hr
 (159849)
embryo 18-20hr
 (179358)
embryo 20-22hr
 (194865)
embryo 22-24hr
 (142946)
larva L1
 (187956)
larva L2
 (160091)
larva L3 12hr old
 (139662)
larva L3 puffstage 1-2
 (125987)
larva L3 puffstage 3-6
 (119856)
larva L3 puffstage 7-9
 (120613)
white prepupae new
 (111910)
white prepupae 12hr
 (91589)
white prepupae 24hr
 (87500)
pupae 2d postWPP
 (74002)
pupae 3d postWPP
 (66342)
pupae 4d postWPP
 (77901)
adult male 01day
 (58574)
adult male 05day
 (59121)
adult male 30day
 (70899)
adult female 01day
 (134347)
adult female 05day
 (118658)
adult female 30day
 (126495)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (118384)
embryo 02-04hr
 (184958)
embryo 04-06hr
 (171578)
embryo 06-08hr
 (189184)
embryo 08-10hr
 (203996)
embryo 10-12hr
 (236920)
embryo 12-14hr
 (141333)
embryo 14-16hr
 (203073)
embryo 16-18hr
 (159849)
embryo 18-20hr
 (179358)
embryo 20-22hr
 (194865)
embryo 22-24hr
 (142946)
larva L1
 (187956)
larva L2
 (160091)
larva L3 12hr old
 (139662)
larva L3 puffstage 1-2
 (125987)
larva L3 puffstage 3-6
 (119856)
larva L3 puffstage 7-9
 (120613)
white prepupae new
 (111910)
white prepupae 12hr
 (91589)
white prepupae 24hr
 (87500)
pupae 2d postWPP
 (74002)
pupae 3d postWPP
 (66342)
pupae 4d postWPP
 (77901)
adult male 01day
 (58574)
adult male 05day
 (59121)
adult male 30day
 (70899)
adult female 01day
 (134347)
adult female 05day
 (118658)
adult female 30day
 (126495)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 (118384)
embryo 02-04hr
 (184958)
embryo 04-06hr
 (171578)
embryo 06-08hr
 (189184)
embryo 08-10hr
 (203996)
embryo 10-12hr
 (236920)
embryo 12-14hr
 (141333)
embryo 14-16hr
 (203073)
embryo 16-18hr
 (159849)
embryo 18-20hr
 (179358)
embryo 20-22hr
 (194865)
embryo 22-24hr
 (142946)
larva L1
 (187956)
larva L2
 (160091)
larva L3 12hr old
 (139662)
larva L3 puffstage 1-2
 (125987)
larva L3 puffstage 3-6
 (119856)
larva L3 puffstage 7-9
 (120613)
white prepupae new
 (111910)
white prepupae 12hr
 (91589)
white prepupae 24hr
 (87500)
pupae 2d postWPP
 (74002)
pupae 3d postWPP
 (66342)
pupae 4d postWPP
 (77901)
adult male 01day
 (58574)
adult male 05day
 (59121)
adult male 30day
 (70899)
adult female 01day
 (134347)
adult female 05day
 (118658)
adult female 30day
 (126495)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 118384
embryo 02-04hr
 
 184958
embryo 04-06hr
 
 171578
embryo 06-08hr
 
 189184
embryo 08-10hr
 
 203996
embryo 10-12hr
 
 236920
embryo 12-14hr
 
 141333
embryo 14-16hr
 
 203073
embryo 16-18hr
 
 159849
embryo 18-20hr
 
 179358
embryo 20-22hr
 
 194865
embryo 22-24hr
 
 142946
larva L1
 
 187956
larva L2
 
 160091
larva L3 12hr old
 
 139662
larva L3 puffstage 1-2
 
 125987
larva L3 puffstage 3-6
 
 119856
larva L3 puffstage 7-9
 
 120613
white prepupae new
 
 111910
white prepupae 12hr
 
 91589
white prepupae 24hr
 
 87500
pupae 2d postWPP
 
 74002
pupae 3d postWPP
 
 66342
pupae 4d postWPP
 
 77901
adult male 01day
 
 58574
adult male 05day
 
 59121
adult male 30day
 
 70899
adult female 01day
 
 134347
adult female 05day
 
 118658
adult female 30day
 
 126495
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0261593 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 118384
embryo 02-04hr
 
 184958
embryo 04-06hr
 
 171578
embryo 06-08hr
 
 189184
embryo 08-10hr
 
 203996
embryo 10-12hr
 
 236920
embryo 12-14hr
 
 141333
embryo 14-16hr
 
 203073
embryo 16-18hr
 
 159849
embryo 18-20hr
 
 179358
embryo 20-22hr
 
 194865
embryo 22-24hr
 
 142946
larva L1
 
 187956
larva L2
 
 160091
larva L3 12hr old
 
 139662
larva L3 puffstage 1-2
 
 125987
larva L3 puffstage 3-6
 
 119856
larva L3 puffstage 7-9
 
 120613
white prepupae new
 
 111910
white prepupae 12hr
 
 91589
white prepupae 24hr
 
 87500
pupae 2d postWPP
 
 74002
pupae 3d postWPP
 
 66342
pupae 4d postWPP
 
 77901
adult male 01day
 
 58574
adult male 05day
 
 59121
adult male 30day
 
 70899
adult female 01day
 
 134347
adult female 05day
 
 118658
adult female 30day
 
 126495
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (118384)
embryo 02-04hr
 (184958)
embryo 04-06hr
 (171578)
embryo 06-08hr
 (189184)
embryo 08-10hr
 (203996)
embryo 10-12hr
 (236920)
embryo 12-14hr
 (141333)
embryo 14-16hr
 (203073)
embryo 16-18hr
 (159849)
embryo 18-20hr
 (179358)
embryo 20-22hr
 (194865)
embryo 22-24hr
 (142946)
larva L1
 (187956)
larva L2
 (160091)
larva L3 12hr old
 (139662)
larva L3 puffstage 1-2
 (125987)
larva L3 puffstage 3-6
 (119856)
larva L3 puffstage 7-9
 (120613)
white prepupae new
 (111910)
white prepupae 12hr
 (91589)
white prepupae 24hr
 (87500)
pupae 2d postWPP
 (74002)
pupae 3d postWPP
 (66342)
pupae 4d postWPP
 (77901)
adult male 01day
 (58574)
adult male 05day
 (59121)
adult male 30day
 (70899)
adult female 01day
 (134347)
adult female 05day
 (118658)
adult female 30day
 (126495)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (118384)
embryo 02-04hr
 (184958)
embryo 04-06hr
 (171578)
embryo 06-08hr
 (189184)
embryo 08-10hr
 (203996)
embryo 10-12hr
 (236920)
embryo 12-14hr
 (141333)
embryo 14-16hr
 (203073)
embryo 16-18hr
 (159849)
embryo 18-20hr
 (179358)
embryo 20-22hr
 (194865)
embryo 22-24hr
 (142946)
larva L1
 (187956)
larva L2
 (160091)
larva L3 12hr old
 (139662)
larva L3 puffstage 1-2
 (125987)
larva L3 puffstage 3-6
 (119856)
larva L3 puffstage 7-9
 (120613)
white prepupae new
 (111910)
white prepupae 12hr
 (91589)
white prepupae 24hr
 (87500)
pupae 2d postWPP
 (74002)
pupae 3d postWPP
 (66342)
pupae 4d postWPP
 (77901)
adult male 01day
 (58574)
adult male 05day
 (59121)
adult male 30day
 (70899)
adult female 01day
 (134347)
adult female 05day
 (118658)
adult female 30day
 (126495)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 (118384)
embryo 02-04hr
 (184958)
embryo 04-06hr
 (171578)
embryo 06-08hr
 (189184)
embryo 08-10hr
 (203996)
embryo 10-12hr
 (236920)
embryo 12-14hr
 (141333)
embryo 14-16hr
 (203073)
embryo 16-18hr
 (159849)
embryo 18-20hr
 (179358)
embryo 20-22hr
 (194865)
embryo 22-24hr
 (142946)
larva L1
 (187956)
larva L2
 (160091)
larva L3 12hr old
 (139662)
larva L3 puffstage 1-2
 (125987)
larva L3 puffstage 3-6
 (119856)
larva L3 puffstage 7-9
 (120613)
white prepupae new
 (111910)
white prepupae 12hr
 (91589)
white prepupae 24hr
 (87500)
pupae 2d postWPP
 (74002)
pupae 3d postWPP
 (66342)
pupae 4d postWPP
 (77901)
adult male 01day
 (58574)
adult male 05day
 (59121)
adult male 30day
 (70899)
adult female 01day
 (134347)
adult female 05day
 (118658)
adult female 30day
 (126495)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 118384
embryo 02-04hr
 
 184958
embryo 04-06hr
 
 171578
embryo 06-08hr
 
 189184
embryo 08-10hr
 
 203996
embryo 10-12hr
 
 236920
embryo 12-14hr
 
 141333
embryo 14-16hr
 
 203073
embryo 16-18hr
 
 159849
embryo 18-20hr
 
 179358
embryo 20-22hr
 
 194865
embryo 22-24hr
 
 142946
larva L1
 
 187956
larva L2
 
 160091
larva L3 12hr old
 
 139662
larva L3 puffstage 1-2
 
 125987
larva L3 puffstage 3-6
 
 119856
larva L3 puffstage 7-9
 
 120613
white prepupae new
 
 111910
white prepupae 12hr
 
 91589
white prepupae 24hr
 
 87500
pupae 2d postWPP
 
 74002
pupae 3d postWPP
 
 66342
pupae 4d postWPP
 
 77901
adult male 01day
 
 58574
adult male 05day
 
 59121
adult male 30day
 
 70899
adult female 01day
 
 134347
adult female 05day
 
 118658
adult female 30day
 
 126495
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0261593


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0261593
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0261593 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 2816.625
Larval Midgut
 
 3269.4
Larval Hindgut
 
 4005.8
Larval Malpighian Tubules
 
 4015.5
Larval Fat Body
 
 6914.4
Larval Salivary Gland
 
 6879.7
Larval Trachea
 
 6058.425
Larval Carcass
 
 4835.65
Adult Head
 
 4291.4
Adult Eye
 
 5072.975
Adult Brain
 
 2930.5
Adult Thoracic-Abdominal Ganglion
 
 3168.7
Adult Crop
 
 5140.2
Adult Midgut
 
 4964.7
Adult Hindgut
 
 4954.6
Adult Malpighian Tubules
 
 4023.8
Adult Fat Body
 
 5417.5
Adult Salivary Gland
 
 8370.4
Adult Heart
 
 5810.825
Adult VirginFemale Spermatheca
 
 3698.1
Adult InseminatedFemale Spermatheca
 
 4130
Adult Ovary
 
 3142.2
Adult Testis
 
 578.4
Adult Male Accessory Gland
 
 7551.1
Adult Carcass
 
 4615.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (2816.625)
Larval Midgut
 (3269.4)
Larval Hindgut
 (4005.8)
Larval Malpighian Tubules
 (4015.5)
Larval Fat Body
 (6914.4)
Larval Salivary Gland
 (6879.7)
Larval Trachea
 (6058.425)
Larval Carcass
 (4835.65)
Adult Head
 (4291.4)
Adult Eye
 (5072.975)
Adult Brain
 (2930.5)
Adult Thoracic-Abdominal Ganglion
 (3168.7)
Adult Crop
 (5140.2)
Adult Midgut
 (4964.7)
Adult Hindgut
 (4954.6)
Adult Malpighian Tubules
 (4023.8)
Adult Fat Body
 (5417.5)
Adult Salivary Gland
 (8370.4)
Adult Heart
 (5810.825)
Adult VirginFemale Spermatheca
 (3698.1)
Adult InseminatedFemale Spermatheca
 (4130)
Adult Ovary
 (3142.2)
Adult Testis
 (578.4)
Adult Male Accessory Gland
 (7551.1)
Adult Carcass
 (4615.7)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 (2816.625)
Larval Midgut
 (3269.4)
Larval Hindgut
 (4005.8)
Larval Malpighian Tubules
 (4015.5)
Larval Fat Body
 (6914.4)
Larval Salivary Gland
 (6879.7)
Larval Trachea
 (6058.425)
Larval Carcass
 (4835.65)
Adult Head
 (4291.4)
Adult Eye
 (5072.975)
Adult Brain
 (2930.5)
Adult Thoracic-Abdominal Ganglion
 (3168.7)
Adult Crop
 (5140.2)
Adult Midgut
 (4964.7)
Adult Hindgut
 (4954.6)
Adult Malpighian Tubules
 (4023.8)
Adult Fat Body
 (5417.5)
Adult Salivary Gland
 (8370.4)
Adult Heart
 (5810.825)
Adult VirginFemale Spermatheca
 (3698.1)
Adult InseminatedFemale Spermatheca
 (4130)
Adult Ovary
 (3142.2)
Adult Testis
 
 578.4
Adult Male Accessory Gland
 (7551.1)
Adult Carcass
 (4615.7)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 2816.625
Larval Midgut
 
 3269.4
Larval Hindgut
 
 4005.8
Larval Malpighian Tubules
 
 4015.5
Larval Fat Body
 
 6914.4
Larval Salivary Gland
 
 6879.7
Larval Trachea
 
 6058.425
Larval Carcass
 
 4835.65
Adult Head
 
 4291.4
Adult Eye
 
 5072.975
Adult Brain
 
 2930.5
Adult Thoracic-Abdominal Ganglion
 
 3168.7
Adult Crop
 
 5140.2
Adult Midgut
 
 4964.7
Adult Hindgut
 
 4954.6
Adult Malpighian Tubules
 
 4023.8
Adult Fat Body
 
 5417.5
Adult Salivary Gland
 
 8370.4
Adult Heart
 
 5810.825
Adult VirginFemale Spermatheca
 
 3698.1
Adult InseminatedFemale Spermatheca
 
 4130
Adult Ovary
 
 3142.2
Adult Testis
 
 578.4
Adult Male Accessory Gland
 
 7551.1
Adult Carcass
 
 4615.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0261593 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 2816.625
Larval Midgut
 
 3269.4
Larval Hindgut
 
 4005.8
Larval Malpighian Tubules
 
 4015.5
Larval Fat Body
 
 6914.4
Larval Salivary Gland
 
 6879.7
Larval Trachea
 
 6058.425
Larval Carcass
 
 4835.65
Adult Head
 
 4291.4
Adult Eye
 
 5072.975
Adult Brain
 
 2930.5
Adult Thoracic-Abdominal Ganglion
 
 3168.7
Adult Crop
 
 5140.2
Adult Midgut
 
 4964.7
Adult Hindgut
 
 4954.6
Adult Malpighian Tubules
 
 4023.8
Adult Fat Body
 
 5417.5
Adult Salivary Gland
 
 8370.4
Adult Heart
 
 5810.825
Adult VirginFemale Spermatheca
 
 3698.1
Adult InseminatedFemale Spermatheca
 
 4130
Adult Ovary
 
 3142.2
Adult Testis
 
 578.4
Adult Male Accessory Gland
 
 7551.1
Adult Carcass
 
 4615.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 (2816.625)
Larval Midgut
 (3269.4)
Larval Hindgut
 (4005.8)
Larval Malpighian Tubules
 (4015.5)
Larval Fat Body
 (6914.4)
Larval Salivary Gland
 (6879.7)
Larval Trachea
 (6058.425)
Larval Carcass
 (4835.65)
Adult Head
 (4291.4)
Adult Eye
 (5072.975)
Adult Brain
 (2930.5)
Adult Thoracic-Abdominal Ganglion
 (3168.7)
Adult Crop
 (5140.2)
Adult Midgut
 (4964.7)
Adult Hindgut
 (4954.6)
Adult Malpighian Tubules
 (4023.8)
Adult Fat Body
 (5417.5)
Adult Salivary Gland
 (8370.4)
Adult Heart
 (5810.825)
Adult VirginFemale Spermatheca
 (3698.1)
Adult InseminatedFemale Spermatheca
 (4130)
Adult Ovary
 (3142.2)
Adult Testis
 578.4
Adult Male Accessory Gland
 (7551.1)
Adult Carcass
 (4615.7)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 (2816.625)
Larval Midgut
 (3269.4)
Larval Hindgut
 (4005.8)
Larval Malpighian Tubules
 (4015.5)
Larval Fat Body
 (6914.4)
Larval Salivary Gland
 (6879.7)
Larval Trachea
 (6058.425)
Larval Carcass
 (4835.65)
Adult Head
 (4291.4)
Adult Eye
 (5072.975)
Adult Brain
 (2930.5)
Adult Thoracic-Abdominal Ganglion
 (3168.7)
Adult Crop
 (5140.2)
Adult Midgut
 (4964.7)
Adult Hindgut
 (4954.6)
Adult Malpighian Tubules
 (4023.8)
Adult Fat Body
 (5417.5)
Adult Salivary Gland
 (8370.4)
Adult Heart
 (5810.825)
Adult VirginFemale Spermatheca
 (3698.1)
Adult InseminatedFemale Spermatheca
 (4130)
Adult Ovary
 (3142.2)
Adult Testis
 
 578.4
Adult Male Accessory Gland
 (7551.1)
Adult Carcass
 (4615.7)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 2816.625
Larval Midgut
 
 3269.4
Larval Hindgut
 
 4005.8
Larval Malpighian Tubules
 
 4015.5
Larval Fat Body
 
 6914.4
Larval Salivary Gland
 
 6879.7
Larval Trachea
 
 6058.425
Larval Carcass
 
 4835.65
Adult Head
 
 4291.4
Adult Eye
 
 5072.975
Adult Brain
 
 2930.5
Adult Thoracic-Abdominal Ganglion
 
 3168.7
Adult Crop
 
 5140.2
Adult Midgut
 
 4964.7
Adult Hindgut
 
 4954.6
Adult Malpighian Tubules
 
 4023.8
Adult Fat Body
 
 5417.5
Adult Salivary Gland
 
 8370.4
Adult Heart
 
 5810.825
Adult VirginFemale Spermatheca
 
 3698.1
Adult InseminatedFemale Spermatheca
 
 4130
Adult Ovary
 
 3142.2
Adult Testis
 
 578.4
Adult Male Accessory Gland
 
 7551.1
Adult Carcass
 
 4615.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 4291.4
 
NA 
Eye
 
 5072.975
 
NA 
Brain
 
 2930.5
 
2816.625 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 3168.7
 
NA 
Crop
 
 5140.2
 
3269.4 
Midgut
 
 4964.7
 
4005.8 
Hindgut
 
 4954.6
 
4015.5 
Malpighian Tubules
 
 4023.8
 
6914.4 
Fat Body
 
 5417.5
 
6879.7 
Salivary Gland
 
 8370.4
 
NA 
Heart
 
 5810.825
 
6058.425 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 3698.1
 
NA 
InseminatedFemale Spermatheca
 
 4130
 
NA 
Ovary
 
 3142.2
 
NA 
Testis
 
 578.4
 
NA 
Male Accessory Gland
 
 7551.1
 
4835.65 
Carcass
 
 4615.7

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
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FLIGHT - Cell culture data for RNAi and other high-throughput technologies
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hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
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Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 4 )
For All Classical Alleles Show

Allele of RpS10bClassMutagenStocksKnown lesion
RpS10b12 --
RpS10b+
0 --
RpS10b20 --
RpS10bunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show

Allele of RpS10bClassMutagenStocksKnown lesion
RpS10bGD177432 Yes
RpS10bKK1091011 Yes
RpS10bdsRNA.cLa0 Yes
RpS10bGD82570 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
Duplicated in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap
hide Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
hide Terms Based on Experimental Evidence ( 2 terms )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term
References
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with UniProtKB:P09900
Biological Process ( 0 terms)
Cellular Component
CV term
References
inferred from sequence or structural similarity with UniProtKB:P09900
hide Sequence Ontology: Class of Gene
 
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
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Interacts with
Please look at the allele data for full details of the genetic interactions
RpS10b allele
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Linkouts
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
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Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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hide Stocks Listed in FlyBase ( 5 )
Bloomington
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 356 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
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Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Etymology
'Minute-n' denotes the 14th mutant of the Minute type. Discovered January 11th, 1924.
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: RpS10b M(1)18C
Additional comments
The RpS10a gene may have been derived from the RpS10b gene by retroposition.
"l(1)G0493" may affect "CG14206".
hide Other Comments
Minute gene.
Deletions removing RpS10b but no other cytoplasmic ribosomal protein-encoding genes show Minute phenotypes.
Molecularly-defined mutations in RpS10b result in Minute phenotypes.
Mutant alleles have the developmental delay and bristle phenotype that makes them useful as markers in clonal analysis.
One of a class of genes (see MIN record) that when present in one, rather than two, copies, produce a characteristic phenotype consisting of short slender bristles and delayed development. RK2.
 
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 16 )
Reported As
Symbol Synonym
l(1)carot13
 
M(1)36f
 
Name Synonym
Minute (1) 18C
 
Minute-n
Secondary FlyBase IDs
  • FBgn0002591
  • FBgn0031035
hide References ( 42 )
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hide Recent research papers ( 4 )
Franco et al., 2011, Mol. Cell. Proteomics 10(5): M110.002188
A Novel Strategy to Isolate Ubiquitin Conjugates Reveals Wide Role for Ubiquitination during Neural Development. [FBrf0213919]
Neumüller et al., 2011, Cell Stem Cell 8(5): 580--593
Genome-Wide Analysis of Self-Renewal in Drosophila Neural Stem Cells by Transgenic RNAi. [FBrf0213621]
Wertheim et al., 2011, Mol. Ecol. 20(5): 932--949
Functional genomics of the evolution of increased resistance to parasitism in Drosophila. [FBrf0213049]
Mourikis et al., 2010, BMC Dev. Biol. 10: 107
Modifiers of notch transcriptional activity identified by genome-wide RNAi. [FBrf0212287]