Gene model reviewed during 5.40
Many additional alternative transcripts (with variable internal introns) supported by cDNA and RNA-Seq junction data; only most prevalent isoforms represented.
Probable lncRNA gene; may encode small polypeptide(s).
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.45
lncRNA ; SO:0001877
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\lncRNA:CR42862 using the Feature Mapper tool.
GBrowse - Visual display of RNA-Seq signalsView Dmel\lncRNA:CR42862 in GBrowse 2
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Source for identity of: lncRNA:CR42862 CR42862
Annotations CR32477 and CG16971 merged as CR42862 in release 5.30 of the genome annotation.
The annotation corresponding to CG33229 was erroneously assigned to the CG16971 annotation in release 3.1 of the genome annotation, when it should have been a separate gene. This has been corrected in release 3.2 of the genome annotation so that CG33229 is annotated as a separate gene from CG16971.
Annotation CG32477 renamed CR32477 in release 3.2 of the genome annotation.
Release 2 annotation CG13878 (which was eliminated in release 3 of the genome annotation) overlaps the same region of the genome, on the same strand, as release 3 annotation CG32477 but the intron/exon structure of the two annotations is different.
Possibly a non-coding RNA.