dme-miR-10, mir-10S, miR-10*
Please see the JBrowse view of Dmel\mir-10 for information on other features
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Locations and structures of miRNA models as mapped by miRBase (FBrf0220601).
Conserved: found throughout the Drosophila genus (FBrf0230987).
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\mir-10 using the Feature Mapper tool.
In-situ hybridization using locked nucleic acids showed expression of mir-10-5p and mir-10-3p in the same pattern as pri-mir-10. Northern blots detecting mir-10-5p and mir-10-3p showed that while both increase in expression throughtout embryogenesis, mir-10-3p is more abundant than mir-10-5p. mir-10 is not highly expressed in cells with high levels of Scr or Abd-B, two of its predicted targets.
GBrowse - Visual display of RNA-Seq signals
View Dmel\mir-10 in GBrowse 23-48
3-48
3-44.2
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Source for merge of: mir-10 mir-10S
The annotation for mir-10 has been changed in release 5.31 of the genome annotation, so that instead of representing a mature miRNA it now represents the precursor stem loop pre-miRNA. Thus the separate annotations (CR32942 and CR33565) which previously each represented one of the two mature miRNAs made from the mir-10 stem loop precursor have been converted into a single annotation (CR42977).
New annotation (CR33565) in release 4.1 of the genome annotation.
New annotation (CR32942) in release 3 of the genome annotation.