FlyBase Gene Report: Dmel\nrm

General Information

Symbol

Dmel\nrm

Species

D. melanogaster

Name

neuromusculin

Annotation Symbol

CG43079

Feature Type

protein_coding_gene

FlyBase ID

FBgn0262509

Gene Model Status

Current

Stock Availability

20 publicly available

Gene Snapshot

neuromusculin (nrm) encodes a protein involved in synaptic target recognition. [Date last reviewed: 2019-09-26]

Other Summaries

Alliance
Auto summary
Interactive Fly

Key Links

Genomic Location

Cytogenetic map

80C3-80C3

Sequence location

3L:22,998,372..23,040,300 [+]

Recombination map

3-47

Sequence

Get Decorated FASTA

Genomic Maps

GBrowse JBrowse

Help me choose

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

GO Summary Ribbons

[Detailed GO annotations]

Protein Family (UniProt)

Protein Signatures (InterPro)

Molecular Function (GO)
[Detailed GO annotations]

Experimental Evidence

Predictions / Assertions

Summaries

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the GBrowse view of Dmel\nrm or the JBrowse view of Dmel\nrm for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Comments on Gene Model

Gene model reviewed during 5.39

FBrf0064540 suggests that there are 2 forms of nrm, a membrane and secreted form. It is unclear which of the curated nrm transcripts corresponds to which isoform.

Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.46

Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated

Sequence Ontology: Class of Gene

gene_with_edited_transcript

(Rodriguez et al., 2012)

nuclear_gene

(Drosophila Heterochromatin Genome Project, 2006)

protein_coding_gene

(Drosophila Heterochromatin Genome Project, 2006)

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

nrm-RA

FBtr0304830

NM_079494

4033

1087

nrm-RB

FBtr0304831

NM_001043156

4067

1036

nrm-RE

FBtr0304833

NM_001259961

7348

2192

nrm-RF

FBtr0304834

NM_001259962

4063

1097

nrm-RH

FBtr0304836

NM_001259964

4608

1209

nrm-RI

FBtr0333221

NM_001275303

8333

1846

Additional Transcript Data and Comments

Reported size (kB)

4.6 (northern blot)

(Kania et al., 1993)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

nrm-PA

FBpp0293370

121.7

1087

4.94

NP_524218

AAF51887

nrm-PB

FBpp0293371

116.0

1036

5.00

NP_001036621

ABI31268

nrm-PE

FBpp0293373

244.6

2192

6.73

NP_001246890

AFH04561

nrm-PF

FBpp0293374

122.8

1097

4.94

NP_001246891

AFH04562

nrm-PH

FBpp0293376

135.6

1209

5.72

NP_001246893

AFH04564

nrm-PI

FBpp0305423

207.2

1846

6.40

NP_001262232

AGB94925

Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments

Reported size (kDa)

1011 (aa); 113 (kD predicted)

(Kania et al., 1993)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\nrm using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

nrm_1

Linkouts

Gene Ontology (2 terms)

Molecular Function (0 terms)

There is no information supporting a Molecular Function term for this gene. (Based on a review of available data before: 2006-08-03 )

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (0 terms)

Biological Process (1 term)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

synaptic target recognition

inferred from mutant phenotype

(Kurusu et al., 2008)

Terms Based on Predictions or Assertions (0 terms)

Cellular Component (1 term)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

plasma membrane

inferred from direct assay

(Kania et al., 1993)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

plasma membrane

inferred from sequence or structural similarity

(Kania et al., 1993)

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 9

sensory mother cell

(Kania et al., 1993)

embryonic stage 9 -- 12

presumptive embryonic/larval peripheral nervous system

(Kania et al., 1993)

embryonic stage 15 -- 17

embryonic/larval muscle system

(Kania et al., 1993)

Additional Descriptive Data

In the PNS, nrm expression begins at stage 9 at which time two large SMCs can be identified in most segments. During germ band extension and retraction, the number of nrm-expressing cells increases dramatically. Most of these cells will become part of the PNS. During germ band retraction, nrm expression is much reduced and by the end of stage 12, expression is barely detectable. At later embryonic stages, nrm is expressed in developing muscles. In stage 15, many muscle precursors are weakly visible. During stage 16, labeling becomes much more intense. Most muscles are labeled, and some, e.g. 6,7,12, and 13 are consistently labeled darker than most others.

(Kania et al., 1993)

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

day 7 of adulthood -- day 49 of adulthood

adult heart

(Cammarato et al., 2011)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

plasma membrane

inferred from direct assay

(Kania et al., 1993)

Expression Deduced from Reporters

Reporter: P{A92}nrm^A37

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

tormogen cell

(Blair et al., 1992)

embryonic stage 7 -- 8

procephalic neurogenic region | restricted

(Ghysen and O'Kane, 1989)

embryonic stage 9 -- 11

ventral neurectoderm | segmentally repeated

(Ghysen and O'Kane, 1989)

embryonic stage 15

external sensory organ | restricted

(Ghysen and O'Kane, 1989)

presumptive embryonic/larval peripheral nervous system

(Ghysen and O'Kane, 1989)

larval stage

embryonic/larval muscle system

(Kania et al., 1993)

third instar larval stage

external sensory organ precursor cell of wing disc

(Ghysen and O'Kane, 1989)

eye-antennal disc

(Kania et al., 1993)

sensory mother cell of wing disc

(Kania et al., 1993)

ventral thoracic disc

(Kania et al., 1993)

photoreceptor cell | presumptive

(Kania et al., 1993)

pupal stage

sensillum campaniformium

(Blair et al., 1992)

wing vein L1

(Blair et al., 1992)

adult stage

sensillum campaniformium of leg

(Kania et al., 1993)

proboscis muscle

(Kania et al., 1993)

peripheral nervous system

(Kania et al., 1993)

indirect flight muscle

(Kania et al., 1993)

antennal sense organ

(Kania et al., 1993)

adult muscle system

(Kania et al., 1993)

maxillary palp sense organ

(Kania et al., 1993)

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\nrm in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\nrm

View exonic expression by tissue for Dmel\nrm

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, and Transgenic Constructs

Classical and Insertion Alleles ( 15 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 9 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of nrm

Transgenic constructs containing regulatory region of nrm

Deletions and Duplications ( 1 )

Disrupted in

Df(3L)Δ1AK

(Syrzycka et al., 2019, Kania and Bellen, 1995, Kania et al., 1993)

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

lethal

nrm^MI01630

lethal | recessive

viable

nrm^{MI01630-GFSTF.1}

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

viable, with Scer\GAL4^Mef2.PR

viable, with Scer\GAL4^pnr-MD237

viable, with Scer\GAL4^tin.CΔ4

viable, with Scer\GAL4^Tub.PU

Sterility

Allele

fertile, with Scer\GAL4^Tub.PU

Phenotype manifest in

Allele

central nervous system & abdominal segment 4

central nervous system & abdominal segment 5

chordotonal organ & abdominal segment 4

nrm⁴⁸

chordotonal organ & abdominal segment 5

nrm⁴⁸

MP1 neuron

nrm¹⁶⁵

peripheral nervous system & abdominal segment 4

nrm¹⁶⁵

peripheral nervous system & abdominal segment 5

nrm¹⁶⁵

somatic muscle & abdominal segment 4

nrm¹⁶⁵

somatic muscle & abdominal segment 5

nrm¹⁶⁵

Orthologs

Downloads

Download All DIOPT Orthologs

Download All OrthoDB Orthologs

Human Orthologs (via DIOPT v7.1)

Homo sapiens (Human) (6)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\CD276

1 of 15

Yes

Hsap\CRTAM

1 of 15

Yes

Hsap\HEPACAM2

1 of 15

Yes

Hsap\SIRPA

1 of 15

Yes

Hsap\SIRPB1

1 of 15

Yes

Hsap\SIRPG

1 of 15

Yes

Model Organism Orthologs (via DIOPT v7.1)

Mus musculus (laboratory mouse) (25)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Btnl2

1 of 15

Yes

Mmus\Ceacam5

1 of 15

Yes

Mmus\Ceacam9

1 of 15

Yes

Mmus\Ceacam10

1 of 15

Yes

Mmus\Ceacam11

1 of 15

Yes

Mmus\Ceacam12

1 of 15

Yes

Mmus\Ceacam13

1 of 15

Yes

Mmus\Ceacam14

1 of 15

Yes

Mmus\F830045P16Rik

1 of 15

Yes

Mmus\Gm5155

1 of 15

Yes

Mmus\Hepacam

1 of 15

Yes

Mmus\Psg16

1 of 15

Yes

Mmus\Psg17

1 of 15

Yes

Mmus\Psg18

1 of 15

Yes

Mmus\Psg19

1 of 15

Yes

Mmus\Psg21

1 of 15

Yes

Mmus\Psg22

1 of 15

Yes

Mmus\Psg23

1 of 15

Yes

Mmus\Psg25

1 of 15

Yes

Mmus\Psg26

1 of 15

Yes

Mmus\Psg27

1 of 15

Yes

Mmus\Psg28

1 of 15

Yes

Mmus\Psg29

1 of 15

Yes

Mmus\Sirpa

1 of 15

Yes

Mmus\Sirpb1a

1 of 15

Yes

Rattus norvegicus (Norway rat) (13)

Rnor\Btnl2

1 of 13

Yes

Rnor\Ceacam3

1 of 13

Yes

Rnor\Cgm4

1 of 13

Yes

Rnor\Igfl3

1 of 13

Yes

Rnor\LOC102557319

1 of 13

Yes

Rnor\LOC108349752

1 of 13

Yes

Rnor\Psg16

1 of 13

Yes

Rnor\Psg19

1 of 13

Yes

Rnor\Psg29

1 of 13

Yes

Rnor\Psgb1

1 of 13

Yes

Rnor\RGD1566226

1 of 13

Yes

Rnor\Sirpa

1 of 13

Yes

Rnor\Tapbpl

1 of 13

Yes

Xenopus tropicalis (Western clawed frog) (3)

Xtro\LOC100216153

1 of 12

Yes

Xtro\LOC100497709

1 of 12

Yes

Xtro\LOC100498328

1 of 12

Yes

Danio rerio (Zebrafish) (2)

Drer\si:dkey-234i14.9

1 of 15

Yes

Drer\siglec15l

1 of 15

Yes

Caenorhabditis elegans (Nematode, roundworm) (1)

Cele\egl-15

1 of 15

Yes

Arabidopsis thaliana (thale-cress) (0)

No records found.

Saccharomyces cerevisiae (Brewer's yeast) (0)

No records found.

Schizosaccharomyces pombe (Fission yeast) (0)

No records found.

Orthologs in Drosophila Species (via OrthoDB v9.1) ( EOG0919007Q )

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila melanogaster

fruit fly

Dmel\nrm

Drosophila suzukii

Spotted wing Drosophila

Drosophila simulans

Drosophila sechellia

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA16918

Drosophila persimilis

Dper\GL24990

Drosophila persimilis

Dper\GL24989

Drosophila willistoni

Dwil\GK12999

Drosophila virilis

Dvir\GJ11810

Drosophila mojavensis

Dmoj\GI13448

Drosophila grimshawi

Dgri\GH16788

Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG0915005J )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Musca domestica

House fly

Mdoa\17010223

Lucilia cuprina

Australian sheep blowfly

Lcup\FF38_03252

Mayetiola destructor

Hessian fly

Mdes\Mdes001015

Mayetiola destructor

Hessian fly

Mdes\Mdes013788

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL004098

Anopheles darlingi

American malaria mosquito

Adar\ADAC001260

Anopheles gambiae

Malaria mosquito

Agam\AGAP012343

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ003412

Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W02SH )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Bombyx mori

Silkmoth

Bmor\BGIBMGA000067

Danaus plexippus

Monarch butterfly

Dple\DPOGS208354-PA

Heliconius melpomene

Postman butterfly

Hmel\HMEL003764

Apis florea

Little honeybee

Aflo\2147885171

Apis mellifera

Western honey bee

Amel\GB43497

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP20969

Bombus terrestris

Buff-tailed bumblebee

Bter\15206863

Linepithema humile

Argentine ant

Lhum\LH14593

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:000892

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG013667

Dendroctonus ponderosae

Mountain pine beetle

Dpod\YQE_02634

Tribolium castaneum

Red flour beetle

Tcas\TC006983

Pediculus humanus

Human body louse

Phum\PHUM109730

Rhodnius prolixus

Kissing bug

Rpro\RPRC009538

Cimex lectularius

Bed bug

Clec\CLEC005450

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI002969

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_15481

Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X02PJ )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strigamia maritima

European centipede

Smar\SMAR015010

Strigamia maritima

European centipede

Smar\SMAR015300

Strigamia maritima

European centipede

Smar\SMAR006422

Strigamia maritima

European centipede

Smar\SMAR010817

Strigamia maritima

European centipede

Smar\SMAR008092

Stegodyphus mimosarum

African social velvet spider

Smim\KFM79279.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM79277.1

Tetranychus urticae

Two-spotted spider mite

Turt\tetur06g04670

Tetranychus urticae

Two-spotted spider mite

Turt\tetur06g04660

Tetranychus urticae

Two-spotted spider mite

Turt\tetur37g00200

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_67074

Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0457 )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Igf_13

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v7.1)

Drosophila melanogaster (Fruit fly) (17)

Gene Symbol

Score

Source

Alignment

2 of 10

2 of 10

hbs

2 of 10

kirre

2 of 10

rst

2 of 10

2 of 10

2 of 10

2 of 10

2 of 10

2 of 10

2 of 10

2 of 10

2 of 10

sns

2 of 10

CG17716

1 of 10

plum

1 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Comments on Models/Modifiers Based on Experimental Evidence ( 0 )

Disease Associations of Human Orthologs (via DIOPT v7.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

nrm

bead aggregation assay, fluorescence microscopy, inferred by author

(Kania et al., 1993)

nrm - CG5597

enzyme linked immunosorbent assay

(Ozkan et al., 2013)

Summary of Genetic Interactions

esyN Network Diagram

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0262509

MIST (protein-protein) - An integrated Molecular Interaction Database

Pathways

Gene Group - Pathway Membership (FlyBase)

External Data

Linkouts

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

3-47

Cytogenetic map

80C3-80C3

Sequence location

3L:22,998,372..23,040,300 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

80C3-80C3

Limits computationally determined from genome sequence between P{lacW}l(3)j1B10^j1B10 and P{lacW}l(3)j2C4^j2C4

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

3-47

(FlyBase, 2016)

3-44.0

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (20)

Bloomington

36457

y¹ w^*; Mi{MIC}nrm^MI01630

37557

y¹ w^*; Mi{MIC}nrm^MI01423

52945

y¹ v¹; P{TRiP.HMJ21612}attP40/CyO

Harvard

c04951

PBac{PB}nrm^c04951

Kyoto

124490

w¹¹¹⁸; P{RS3}nrm^UM-8342-3

VDRC

v101012

P{KK106539}VIE-260B

v104295

P{KK107103}VIE-260B

v979

w¹¹¹⁸; P{GD94}v979

v980

w¹¹¹⁸; P{GD94}v980

v37282

w¹¹¹⁸; P{GD2590}v37282

v30072

w¹¹¹⁸; P{GD14434}v30072

v30073

w¹¹¹⁸; P{GD14434}v30073

More stocks available...

Genomic Clones (35)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (58)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequences

BDGP DGC clones

IP03054

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0262509

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0262509

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

40515

Antibody Information

Laboratory Generated Antibodies

polyclonal

(Kania et al., 1993)

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: nrm CG8779

(Worley, 1999.11)

Source for database merge of

Source for merge of: nrm CG41452 CG32458

(FlyBase Genome Annotators, 2010)

Additional comments

Annotations CG8779, CG41452 and CG32458 merged as CG43079 in release 5.31 of the genome annotation.

(FlyBase Genome Annotators, 2010)

Other Comments

New annotation (CG41452) in release 5.1 of the genome annotation.

(Drosophila Heterochromatin Genome Project, 2006)

New annotation (CG32458) in release 3 of the genome annotation.

(FlyBase Genome Annotators, 2002-2003)

nrm expression during embryogenesis has been analysed in wild-type and mutant flies.

(Kania and Bellen, 1995)

nrm is expressed in sensory mother cells and developing muscles. Immunoblots of Schneider 2 cells transfected with nrm indicate the protein is present in a membrane-associated form and a secreted form. Cell aggregation assays suggest nrm is a homophilic cell adhesion molecule that is secreted or released after proteolysis. Genetic analysis indicates nrm is an essential gene required for larval viability. It is proposed that nrm may play a role as a cell adhesion molecule in clustering cells of the PNS, neuronal fasciculation and/or pathfinding.

(Kania et al., 1993)

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 52 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

40515

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0262509

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

nrm_1

FlyMine - An integrated database for Drosophila genomics

FBgn0262509

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

40515

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC006983

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG43079

modMine - A data warehouse for the modENCODE project

FBgn0262509

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0262509

DRSC - Results frm RNAi screens

FBgn0262509

MIST (protein-protein) - An integrated Molecular Interaction Database

Synonyms and Secondary IDs (8)

Reported As

Symbol Synonym

CG32458

(Japanese National Institute of Genetics, 2012.5.21, Zhai et al., 2012, Keleman et al., 2009.8.5)

CG41452

CG43079

(Çiçek et al., 2016, FlyBase Genome Annotators, 2010, Ni et al., 2010.12.1)

CG8779

(Cammarato et al., 2011, Keleman et al., 2009.8.5)

CT16082

(Hynes and Zhao, 2000)

nrm

(Meltzer et al., 2019, Syrzycka et al., 2019, Ariss et al., 2018, Gene Disruption Project members, 2015-, Nagarkar-Jaiswal et al., 2015, Ashwal-Fluss et al., 2014, Ozkan et al., 2013, Ozkan et al., 2013, Ozkan et al., 2013, Sen et al., 2013, Weavers and Skaer, 2013, Rodriguez et al., 2012, Yasuhara and Wakimoto, 2008, Badal et al., 2006, Reeves and Posakony, 2005)

Name Synonyms

Neuromusculin

(Halaby and Mornon, 1998)

neuromusculin

(Weavers and Skaer, 2013, Cammarato et al., 2011, Kurusu et al., 2008)

Secondary FlyBase IDs

FBgn0005629
FBan0008779
FBgn0084015
FBan0041452
FBgn0052458
FBan0032458

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Study focus (0)

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References (75)

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