• Home
• Tools
  • Tools Overview
  • Query Tools

    
    • QuickSearch
    • QueryBuilder
    • TermLink
    • CytoSearch
    • Interactions Browser
    • ImageBrowse
    • Find A Person
    • Google™ FlyBase
  • Genomic/Map Tools

    
    • BLAST
    • GBrowse
    • CytoSearch
    • Aberrations Maps
    • Chromosome Maps
    • Coordinates Converter
  • Retrieve/Convert

    
    • Batch Download
    • Coordinates Converter
    • ID Converter
  • Data Submission

    
    • Fast-Track Your Paper
    • Submit Personal Comm
    • Add A New Person
    • Update Person Info
  • People

    
    • Find A Person
    • Add A New Person
    • Update Person Info
• Files
  • Files Overview
  • Downloads:
  • Precomputed files
  • Archived data
  • Releases (FTP)
  • Genomes (FTP)
  • AAA data (FTP)
  • Lists:
  • Transposons (Dmel)
  • Transposons (other)
  • Vectors & Constructs
  • Anatomical Terms
  • Map Conversion
• Species
  • Phylogeny
  • Sequenced Species
  • Synteny Table
  • Color Illustrations
  • Abbreviations
• Documents
  • About FlyBase
  • Reference Manual:
  • Sections
  • Contents
  • Nomenclature
  • Release Notes
• Resources
  • All Resources
  • Model Organisms
  • Stock Collections
  • Other links:
  • BDGP
  • DGRC
  • FlyExpress
  • Interactive Fly
  • modENCODE
  • Textpresso for Fly
• News
  • News
  • FlyBase Forum
  • FlyBase Positions
  • Meetings
  • Courses
  • Fly Board
  • White papers
  • Funding
  • bionet.dros
• Help
  • Google™ FlyBase
  • Site Map
  • FAQs
  • FlyBase Guides
  • Video Tutorials
  • Report help
  • New to Flies
  • Pers. comm.
  • Author guidelines
  • Contact FlyBase
• Archives
  • Prior Release
  • Other Archives
  • Coordinate Converter

Gene Dmel\CG43154

General Information
Symbol	Dmel\CG43154	Species	D. melanogaster
Name		Annotation symbol	CG43154
Feature type	protein_coding_gene	FlyBase ID	FBgn0262684
Gene Model Status	Current	Stock availability	13 publicly available
Also Known As	CG32663, CG1905
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	10E6-10F1	Sequence location	X:11,710,931..11,731,493 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG43154 (FBgn0262684). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 15 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Breast carcinoma amplified sequence 3; WD40/YVTN repeat-like-containing domain. Gene sequence location is X:11710931..11731493.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	Sequence features BKN23935 BKN22705 BKN46114 HFA19821
FB2011_10	References Knowles-Barley, 2011.8.24, BrainTrap expression curation.
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 10E6-10F1   Limits computationally determined from genome sequence between P{EP}EP345&P{EP}EP1409 and P{EP}ATP7EP308
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG43154 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene merge based on RNA-Seq data.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG43154-RB FBtr0305603     5275   1122 CG43154-RC FBtr0305604     8138   2075 CG43154-RD FBtr0305605     6807   1122 CG43154-RE FBtr0305606     9134   2075
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG43154-PB   FBpp0294054   117.5   1122   5.79       CG43154-PC   FBpp0294055   225.1   2075   6.02       CG43154-PD   FBpp0294056   117.5   1122   5.79       CG43154-PE   FBpp0294057   225.1   2075   6.02
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Breast carcinoma amplified sequence 3 (IPR022175) WD40/YVTN repeat-like-containing domain (IPR015943)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA695885   AA695895   AA802730   AA941932   AI124320   AI257009   AI297812   AI405084   AI546111   AW942748   AY051941 AAK93365   AY075392 AAL68226   BF504206   BG633645   BP545521   BP545522   CK658254   CK658935   CK659142   CO156006   CO189497   CO266548   CO269727   CO272307   CO273080   CO273190   CO278158   CO279278   CO279656   CO284034   CO285783   CO286163   CO288460   CO289638   CO295940   CO304517   CO308403   CO309706   CO314321   CO317309   CO319825   CO329136   CO333546   CO334079   CO337117   CO337270   CO337682   CO338896   CO342528   CO345266   DQ327766   EC061316   EC061583   EC066251   EC066622   EC069901   EC071905   EC072675   EC072761   EC077715   EC080290   EC080705   EC083270   EC087429   EC089951   EC209317   EC215365   EC216757   EC242055   EC242181   EC244144   EC247602   EC251347   EC256062   EC261516   EC266150   EC267901   EV590378   EV596584
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8SY41 Q960P3 Q9VYU0
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. [an error occurred while processing this directive] modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
External Data & Images
Linkouts
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG43154f02881 viable, with Scer\GAL4pnr-MD237 CG43154GD9673 Sterility Allele fertile CG43154f02881 Phenotype manifest in Allele
Classical Alleles ( 11 )
For All Classical Alleles Show
Allele of CG43154 Class Mutagen Stocks Known lesion CG43154f02881 piggyBac transposase 2 -- CG431545-SZ-4093 1 -- CG43154d09435 1 -- CG43154d10563 1 -- CG43154e00654 1 -- CG43154EY08948 1 -- CG43154f02331 1 -- CG43154KG09187a 1 -- CG43154CPTI004347 piggyBac transposase 0 Yes CG43154GG01424 0 -- CG43154GG01838 0 --
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG43154 Class Mutagen Stocks Known lesion CG43154GD9673 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG43154KK102639 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG43154KK103743 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG43154GD17175 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(1)Exel6243 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}CG43154EY08948 NA P{Mae-UAS.6.11}CG43154GG01424 NA P{Mae-UAS.6.11}CG43154GG01838 NA P{XP}CG43154d09435 NA P{XP}CG43154d10563 NA miscellaneous insertions P{RS5}CG431545-SZ-4093 NA P{SUPor-P}CG43154KG09187a NA PBac{806.LOX-SVS-2}CG43154CPTI004347 NA PBac{RB}CG43154e00654 NA PBac{WH}CG43154f02331 NA PBac{WH}CG43154f02881 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
	There is no information supporting a biological process, cellular component or molecular function term for this gene. (Based on a review of available data before: 2006)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG43154 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0262684
Orthologs
Genome-wide drosophilid orthologs	Dana\GF19493 Dere\GG18446 Dgri\GH24371 Dmoj\GI15311 Dper\GL20198 Dper\GL20199 Dpse\GA26808 Dsec\GM13110 Dvir\GJ14746 Dwil\GK14849 Dyak\GE15668
Curated drosophilid orthologs	Dpse\GA17048   Dpse\GA17049
Linkouts
Stocks & Reagents
Stocks Listed in FlyBase ( 13 )
Bloomington	18596 w1118 PBac{WH}CG43154f02881 16915 y1 w67c23 P{EPgy2}CG43154EY08948
Harvard	- P{XP}CG43154d09435 - P{XP}CG43154d10563 - PBac{RB}CG43154e00654 - PBac{WH}CG43154f02331 - PBac{WH}CG43154f02881
Kyoto	126339 w1118 P{RS5}CG431545-SZ-4093
VDRC	v107065 P{KK102639}VIE-260B v108228 P{KK103743}VIE-260B v48768 w1118; P{GD9673}v48768 v48769 w1118; P{GD9673}v48769
	More stocks available...
Genomic Clones ( 2 )
	BACR12H01 BACR46E23 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 73 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD27278 LD41932
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT05518 GH25002 GM04714 GM06227 LP05207 LP12206 LP15054 LP16270 LP16681
Other clones	8360 9889 10329 18439 20202 28196 31879 35925 80122 84335 154567 156275 161969 163511 176043 214449.7 282132 283470 562178 568920 569528 AI124320 CK01.25C.C5 CK01.54D.D5 CK01.79D.B2 CK01.87A.D12 CK01.91C.C2 Dmel_neb_006021_0329_0998 Dmel_neb_010768_0846_1674 EK044415 EK060706 EK061937 EK068548 EK071641 EK095709 EK106640 EK109440 EK109955 EK129023 EK133939 EK135560 EK146827 EK165101 EK212338 EK218934 EK235761 EK245003 EK257952 EK267646 EK280956 EK292109 EK307235 EK308834 EN07202 EN13849 EN14163 EN15061 EP00132 EP15053 EP21720 FGC031G05 GM04730
RNAi & Array Information
Linkouts	GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32136 326228
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG32662 anon-EST:Liang-2.41 (Ashburner, 2004.6.30) Source for merge of: CG32663 CG32662 (FlyBase Genome Annotators, 2011)
Additional comments	Annotations CG32663 and CG32662 merged as CG43154 in release 5.33 of the genome annotation. (FlyBase Genome Annotators, 2011) Annotation CG1905 split into CG32662 and CG32663 in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
Other Comments
	RNAi generated by PCR using primers directed to this gene causes a cell growth and viability phenotype when assayed in Kc167 and S2R+ cells. (Boutros et al., 2004)
External Crossreferences & Linkouts
Sequence Crossreferences
	DDBJ / EMBL / GenBank • AA941932 AAF48098 AAK93365 AAL68226 AAN09302 AI124320 AI546111 AW942748 AY051941 AY075392 DQ327766 Entrez Gene - A searchable database of RefSeq genes. • 32136 326228 UniProtKB/TrEMBL • Q8SY41 Q9VYU0 Q960P3
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Breast carcinoma amplified sequence 3 (IPR022175) WD40/YVTN repeat-like-containing domain (IPR015943)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0262684 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32136 326228
Synonyms & Secondary IDs ( 6 )
Reported As
Symbol Synonym	anon-EST:Liang-2.41   CG1905 (Boutros et al., 2004, Zinke et al., 2002, BDGP Project Members, 2000-, ) CG32662 (Keleman et al., 2009.8.5) CG32663 (Cui et al., 2008, Keleman et al., 2009.8.5, Manak et al., 2006) CG43154 (FlyBase Genome Annotators, 2011) clone 2.41 (Liang and Biggin, 1998)
Name Synonym
Secondary FlyBase IDs
	FBgn0025954 FBgn0030337 FBgn0052662 FBgn0052663
References ( 21 )
Generate a list of	All references relating to this gene ( 21 )
List References by type	Research paper  ( 4 ) Supplementary material  ( 4 ) Personal communication to FlyBase  ( 7 ) FlyBase analysis  ( 5 ) Computer file  ( 1 )
Recent research papers ( 1 )
	Blanco et al., 2010, BMC Dev. Biol. 10: 94 Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812] Show all research papers ...