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Gene Dmel\CG43164

General Information
Symbol	Dmel\CG43164	Species	D. melanogaster
Name		Annotation symbol	CG43164
Feature type	protein_coding_gene	FlyBase ID	FBgn0262720
Gene Model Status	Current	Stock availability	1 publicly available
Also Known As	CG4844, CG33006, CG18431, anon2D7
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	54B18-54C1	Sequence location	2R:13,389,859..13,396,150 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG43164 (FBgn0262720). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: carbohydrate binding. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. Protein features are: C-type lectin; C-type lectin fold; C-type lectin-like. Gene sequence location is 2R:13389859..13396150.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 54B18-54C1   Limits computationally determined from genome sequence between P{EP}l(2)k01209EP2177&P{lacW}k11012a and P{lacW}l(2)k07433k07433
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG43164 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.50 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG43164-RA FBtr0305701  NM_001032266   2450   194 CG43164-RB FBtr0305702  NM_001202034   2447   193 CG43164-RC FBtr0305703  NM_001032264   2338   491 CG43164-RD FBtr0305704  NM_001259468   1962   194 CG43164-RE FBtr0305705  NM_001032265   2012   490
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG43164-PA   FBpp0296981   21.7   194   5.74     NP_001027437   AAF57852 CG43164-PB   FBpp0296982   21.6   193   5.74     NP_001188963   ADV37209 CG43164-PC   FBpp0296983   54.2   491   4.13     NP_001027435   AAF57846 CG43164-PD   FBpp0296984   21.7   194   5.74     NP_001246397   AFH08150 CG43164-PE   FBpp0296985   54.2   490   4.13     NP_001027436   AAF57851
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • C-type lectin (IPR001304) C-type lectin-like (IPR016186) C-type lectin fold (IPR016187)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA391057   AA433254   AE013599 AAF57846   AE013599 AAF57851   AE013599 AAF57852   AE013599 ADV37209   AF005859 AAB81490   AE013599 AFH08150   AI259714   AI259833   AI260933   AI293624   AW942111   AY069396 AAL39541   BI162036   BI231019   BI367300   BT082097   BT126129   CK657838   CK658412   CK658416   CK659695   CK661320   CO177061   CO185932   CO193715   CO263541   CO267613   CO272542   CO274625   CO276200   CO276232   CO277889   CO279929   CO285858   CO287176   CO295004   CO297915   CO298653   CO303557   CO304184   CO304678   CO308124   CO309227   CO310353   CO310537   CO313072   CO313294   CO315462   CO315667   CO316005   CO316256   CO326178   CO332145   CO340865   CO342882   CO343399   CO344569   CO345277   EC052333   EC059345   EC060001   EC061423   EC067790   EC070840   EC071853   EC072084   EC072531   EC076090   EC077826   EC079976   EC082121   EC085372   EC088655   EC090010   EC196602   EC200122   EC202064   EC203609   EC203895   EC207165   EC208722   EC210585   EC210965   EC212931   EC218504   EC225409   EC225583   EC232242   EC232820   EC237102   EC237140   EC237698   EC238291   EC238332   EC238440   EC238467   EC242442   EC242926   EC248456   EC252801   EC253645   EC255896   EC258581   EC259758   EC260585   EL872365   EL872366   EL872481   GH739379   GH741792   GH742778   GH743415   GH744433   GH744505   GH745552   GH746621   GH747828   GH751454   GH752761   GH752816   GH753601   GH755216   GH755863   GH756199   GH756587   GH756966   GH758092   GH758318   GH759947   GH763649   GH763802   GH763909   GH764090   GH764192   GH764788   GH766121   GH768126   GH769880   GH773350   GH775143   GH777158   GH778344   GH780712   GH781730   GH782982   GH783570   GH786227   GH786805   GH788771   GH795716   GH795920   GH796022   GH796205   GH796852   GH797306   GH797466   GH797886   GH798863   GH800809   GH801789   GH802697   GH802818   GH804239   GH804442   GH805936   GH806753   GH807298   GH807439   GH807443   GH809472   GH810559   GH814381   GH816278   GH818558   GH819171   GH820941   GH821118   GH822638   GH824009   GH824341   GH825862   GH826437   GH826759   GH827432   GH828537   GH829508   GH829759   GH829778   GH832352   GH835677   GH836614   GH836790   GH836959   GH837097   GH839282   GH841666   GH842541   GH842759   GH843934   GH844677   GH845573   GH846326   GH846649   GH846652   GH846905   GH847672   GH854347   GH854373   GH854416   GH855011   GH856511   GH856942   GH857264   GH857985   GH860003   GH860838   GH862340   GH864284   GH864744   GH865437   GH866936   GH867275   GH868009   GH869718   GH870463   GH871108   GH871983   GH872036   GH872585   GH872626   GH873938   GH874527   GH876355   GH877459   GH878836   GH879495   GH882533   GH884927   GH885039   GH886073   GH886361   GH887966   GH889205   GH890090   GH890503   GH890799   GH894148   GH894170   GH896357   GH896607   GH896944   GH897018   GH897112   GH897123   GH897182   GH897515   GH902003   GH904525   GH904806   GH906389   GH907061   GH907644   GH908030   GH909032   GH910358   GH911029   GH912284   GH912646   GH913332   GH914416   GH915022   GH915024   GH915682   GH917142   GH917247   GH917287   GH917877   GH918460   GH919353   GH919813   GH919969   GH920199   GH921939   GH922694   GH922880   GH922998   GH923214   GH923700   GH923715   GH926675   GH928409   GH931312   GH931340   GH931414   GH931478   GH932386   GH934032   GH936300   GH938010   GH939363   GH939408   GH939638   GH939675   GH939730   GH939783   GH940357   GH940431   GH940588   GH940643   GH940668   GH940707   GH940734   GH940850   GH941086
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	A1ZAU2 Q7K140 O16054
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 11 -- 12   clypeo-labral primordium   (Fisher et al., 2012) foregut primordium   (Fisher et al., 2012) gnathal primordium   (Fisher et al., 2012) maxillary sensory complex primordium   (Fisher et al., 2012) tracheal primordium   (Fisher et al., 2012) ventral epidermis primordium   (Fisher et al., 2012) embryonic stage 13 -- 16   atrium   (Fisher et al., 2012) Bolwig organ   (Fisher et al., 2012) dorsal head epidermis   (Fisher et al., 2012) embryonic antennal sense organ   (Fisher et al., 2012) embryonic dorsal epidermis   (Fisher et al., 2012) embryonic foregut   (Fisher et al., 2012) embryonic head epidermis   (Fisher et al., 2012) embryonic head sensory system   (Fisher et al., 2012) embryonic hindgut   (Fisher et al., 2012) embryonic maxillary sensory complex   (Fisher et al., 2012) embryonic ventral epidermis   (Fisher et al., 2012) ventral imaginal precursor   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    714 central nervous system, larvae L3    117 central nervous system, pupae P8    64 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    1 head, mated 4-day female    1 head, mated 20-day female    1 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    33 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    0 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    6 fat body, white prepupae    50 fat body, pupae P8    206 carcass, larvae L3 wandering    380 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    7 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (714) central nervous system, larvae L3  (117) central nervous system, pupae P8  (64) head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    1 head, mated 4-day female    1 head, mated 20-day female    1 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae  (33) digestive system, larvae L3 wandering    10 digestive system, 1-day adult    0 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    6 fat body, white prepupae  (50) fat body, pupae P8  (206) carcass, larvae L3 wandering  (380) carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    7 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (714) central nervous system, larvae L3  (117) central nervous system, pupae P8    64 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    1 head, mated 4-day female    1 head, mated 20-day female    1 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    33 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    0 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    6 fat body, white prepupae    50 fat body, pupae P8  (206) carcass, larvae L3 wandering  (380) carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    7 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    714 central nervous system, larvae L3    117 central nervous system, pupae P8    64 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    1 head, mated 4-day female    1 head, mated 20-day female    1 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    33 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    0 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    6 fat body, white prepupae    50 fat body, pupae P8    206 carcass, larvae L3 wandering    380 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    7 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    714 central nervous system, larvae L3    117 central nervous system, pupae P8    64 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    1 head, mated 4-day female    1 head, mated 20-day female    1 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    33 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    0 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    6 fat body, white prepupae    50 fat body, pupae P8    206 carcass, larvae L3 wandering    380 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    7 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (714) central nervous system, larvae L3  (117) central nervous system, pupae P8  (64) head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    1 head, mated 4-day female    1 head, mated 20-day female    1 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae  (33) digestive system, larvae L3 wandering    10 digestive system, 1-day adult    0 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    6 fat body, white prepupae  (50) fat body, pupae P8  (206) carcass, larvae L3 wandering  (380) carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    7 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (714) central nervous system, larvae L3  117 central nervous system, pupae P8    64 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    1 head, mated 4-day female    1 head, mated 20-day female    1 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    33 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    0 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    6 fat body, white prepupae    50 fat body, pupae P8  (206) carcass, larvae L3 wandering  (380) carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    7 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    714 central nervous system, larvae L3    117 central nervous system, pupae P8    64 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    1 head, mated 4-day female    1 head, mated 20-day female    1 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    33 digestive system, larvae L3 wandering    10 digestive system, 1-day adult    0 digestive system, 4-day adult    1 digestive system, 20-day adult    1 fat body, larvae L3 wandering    6 fat body, white prepupae    50 fat body, pupae P8    206 carcass, larvae L3 wandering    380 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    7 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    0 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    7 embryo 04-06hr    20 embryo 06-08hr    172 embryo 08-10hr    326 embryo 10-12hr    456 embryo 12-14hr    301 embryo 14-16hr    86 embryo 16-18hr    7 embryo 18-20hr    6 embryo 20-22hr    3 embryo 22-24hr    4 larva L1    13 larva L2    48 larva L3 12hr old    26 larva L3 puffstage 1-2    85 larva L3 puffstage 3-6    122 larva L3 puffstage 7-9    138 white prepupae new    136 white prepupae 12hr    97 white prepupae 24hr    1583 pupae 2d postWPP    234 pupae 3d postWPP    10 pupae 4d postWPP    9 adult male 01day    1 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    7 embryo 04-06hr    20 embryo 06-08hr  (172) embryo 08-10hr  (326) embryo 10-12hr  (456) embryo 12-14hr  (301) embryo 14-16hr  (86) embryo 16-18hr    7 embryo 18-20hr    6 embryo 20-22hr    3 embryo 22-24hr    4 larva L1    13 larva L2  (48) larva L3 12hr old  26 larva L3 puffstage 1-2  (85) larva L3 puffstage 3-6  (122) larva L3 puffstage 7-9  (138) white prepupae new  (136) white prepupae 12hr  (97) white prepupae 24hr  (1583) pupae 2d postWPP  (234) pupae 3d postWPP    10 pupae 4d postWPP    9 adult male 01day    1 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    7 embryo 04-06hr    20 embryo 06-08hr  (172) embryo 08-10hr  (326) embryo 10-12hr  (456) embryo 12-14hr  (301) embryo 14-16hr    86 embryo 16-18hr    7 embryo 18-20hr    6 embryo 20-22hr    3 embryo 22-24hr    4 larva L1    13 larva L2    48 larva L3 12hr old    26 larva L3 puffstage 1-2    85 larva L3 puffstage 3-6  (122) larva L3 puffstage 7-9  (138) white prepupae new  (136) white prepupae 12hr    97 white prepupae 24hr  (1583) pupae 2d postWPP  (234) pupae 3d postWPP    10 pupae 4d postWPP    9 adult male 01day    1 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    7 embryo 04-06hr    20 embryo 06-08hr    172 embryo 08-10hr    326 embryo 10-12hr    456 embryo 12-14hr    301 embryo 14-16hr    86 embryo 16-18hr    7 embryo 18-20hr    6 embryo 20-22hr    3 embryo 22-24hr    4 larva L1    13 larva L2    48 larva L3 12hr old    26 larva L3 puffstage 1-2    85 larva L3 puffstage 3-6    122 larva L3 puffstage 7-9    138 white prepupae new    136 white prepupae 12hr    97 white prepupae 24hr    1583 pupae 2d postWPP    234 pupae 3d postWPP    10 pupae 4d postWPP    9 adult male 01day    1 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    7 embryo 04-06hr    20 embryo 06-08hr    172 embryo 08-10hr    326 embryo 10-12hr    456 embryo 12-14hr    301 embryo 14-16hr    86 embryo 16-18hr    7 embryo 18-20hr    6 embryo 20-22hr    3 embryo 22-24hr    4 larva L1    13 larva L2    48 larva L3 12hr old    26 larva L3 puffstage 1-2    85 larva L3 puffstage 3-6    122 larva L3 puffstage 7-9    138 white prepupae new    136 white prepupae 12hr    97 white prepupae 24hr    1583 pupae 2d postWPP    234 pupae 3d postWPP    10 pupae 4d postWPP    9 adult male 01day    1 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    7 embryo 04-06hr    20 embryo 06-08hr  (172) embryo 08-10hr  (326) embryo 10-12hr  (456) embryo 12-14hr  (301) embryo 14-16hr  (86) embryo 16-18hr    7 embryo 18-20hr    6 embryo 20-22hr    3 embryo 22-24hr    4 larva L1    13 larva L2  (48) larva L3 12hr old  26 larva L3 puffstage 1-2  (85) larva L3 puffstage 3-6  (122) larva L3 puffstage 7-9  (138) white prepupae new  (136) white prepupae 12hr  (97) white prepupae 24hr  (1583) pupae 2d postWPP  (234) pupae 3d postWPP    10 pupae 4d postWPP    9 adult male 01day    1 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    7 embryo 04-06hr    20 embryo 06-08hr  (172) embryo 08-10hr  (326) embryo 10-12hr  (456) embryo 12-14hr  (301) embryo 14-16hr    86 embryo 16-18hr    7 embryo 18-20hr    6 embryo 20-22hr    3 embryo 22-24hr    4 larva L1    13 larva L2    48 larva L3 12hr old    26 larva L3 puffstage 1-2    85 larva L3 puffstage 3-6  122 larva L3 puffstage 7-9  138 white prepupae new  136 white prepupae 12hr    97 white prepupae 24hr  (1583) pupae 2d postWPP  (234) pupae 3d postWPP    10 pupae 4d postWPP    9 adult male 01day    1 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    7 embryo 04-06hr    20 embryo 06-08hr    172 embryo 08-10hr    326 embryo 10-12hr    456 embryo 12-14hr    301 embryo 14-16hr    86 embryo 16-18hr    7 embryo 18-20hr    6 embryo 20-22hr    3 embryo 22-24hr    4 larva L1    13 larva L2    48 larva L3 12hr old    26 larva L3 puffstage 1-2    85 larva L3 puffstage 3-6    122 larva L3 puffstage 7-9    138 white prepupae new    136 white prepupae 12hr    97 white prepupae 24hr    1583 pupae 2d postWPP    234 pupae 3d postWPP    10 pupae 4d postWPP    9 adult male 01day    1 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    8 embryonic S1    8 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    2 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    34 ovary fGS/OSS    2 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    8 embryonic S1    8 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    2 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2  (34) ovary fGS/OSS    2 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    8 embryonic S1    8 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    2 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    34 ovary fGS/OSS    2 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    8 embryonic S1    8 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    2 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    34 ovary fGS/OSS    2 ovary OSC    0 ovary OSS    0 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    8 embryonic S1    8 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    2 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    34 ovary fGS/OSS    2 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    8 embryonic S1    8 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    2 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2  (34) ovary fGS/OSS    2 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    8 embryonic S1    8 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    2 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    34 ovary fGS/OSS    2 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    0 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    8 embryonic S1    8 embryonic S3    0 leg disc CME L1    0 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    2 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    0 mixed discs ML-DmD4-c1    0 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    0 tumorous blood cells mbn2    34 ovary fGS/OSS    2 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    41 cold shock, 4-day adult    38 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    87 Cadmium 50 mM 12 hrs, larvae L3    90 Cadmium 50 mM 48 hrs, 4-day adult    54 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    163 Copper 15 mM 48 hrs, 4-day adult    7 Zinc 5 mM 12 hrs, larvae L3    136 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    1 Ethanol 5% 3 hrs, larvae L3    66 Ethanol 10% 3 hrs, larvae L3    87 Caffeine 1.5 mg/ml 4 hrs, larvae L3    69 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    37 Paraquat 5 mM 48 hrs, 4-day adult    1 Paraquat 10 mM 48 hrs, 4-day adult    2 Rotenone 2 μg 12 hrs, larvae L3    64 Rotenone 8 μg 12 hrs, larvae L3    69 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (41) cold shock, 4-day adult  (38) heat shock, 4-day adult  (44) Cadmium 50 mM 6 hrs, larvae L3  (87) Cadmium 50 mM 12 hrs, larvae L3  (90) Cadmium 50 mM 48 hrs, 4-day adult  (54) Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3  (163) Copper 15 mM 48 hrs, 4-day adult    7 Zinc 5 mM 12 hrs, larvae L3  (136) Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    1 Ethanol 5% 3 hrs, larvae L3  (66) Ethanol 10% 3 hrs, larvae L3  (87) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (69) Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult  (37) Paraquat 5 mM 48 hrs, 4-day adult    1 Paraquat 10 mM 48 hrs, 4-day adult    2 Rotenone 2 μg 12 hrs, larvae L3  (64) Rotenone 8 μg 12 hrs, larvae L3  (69) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    41 cold shock, 4-day adult    38 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    87 Cadmium 50 mM 12 hrs, larvae L3    90 Cadmium 50 mM 48 hrs, 4-day adult    54 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3  (163) Copper 15 mM 48 hrs, 4-day adult    7 Zinc 5 mM 12 hrs, larvae L3  (136) Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    1 Ethanol 5% 3 hrs, larvae L3    66 Ethanol 10% 3 hrs, larvae L3    87 Caffeine 1.5 mg/ml 4 hrs, larvae L3    69 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    37 Paraquat 5 mM 48 hrs, 4-day adult    1 Paraquat 10 mM 48 hrs, 4-day adult    2 Rotenone 2 μg 12 hrs, larvae L3    64 Rotenone 8 μg 12 hrs, larvae L3    69 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    41 cold shock, 4-day adult    38 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    87 Cadmium 50 mM 12 hrs, larvae L3    90 Cadmium 50 mM 48 hrs, 4-day adult    54 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    163 Copper 15 mM 48 hrs, 4-day adult    7 Zinc 5 mM 12 hrs, larvae L3    136 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    1 Ethanol 5% 3 hrs, larvae L3    66 Ethanol 10% 3 hrs, larvae L3    87 Caffeine 1.5 mg/ml 4 hrs, larvae L3    69 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    37 Paraquat 5 mM 48 hrs, 4-day adult    1 Paraquat 10 mM 48 hrs, 4-day adult    2 Rotenone 2 μg 12 hrs, larvae L3    64 Rotenone 8 μg 12 hrs, larvae L3    69 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    41 cold shock, 4-day adult    38 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    87 Cadmium 50 mM 12 hrs, larvae L3    90 Cadmium 50 mM 48 hrs, 4-day adult    54 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    163 Copper 15 mM 48 hrs, 4-day adult    7 Zinc 5 mM 12 hrs, larvae L3    136 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    1 Ethanol 5% 3 hrs, larvae L3    66 Ethanol 10% 3 hrs, larvae L3    87 Caffeine 1.5 mg/ml 4 hrs, larvae L3    69 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    37 Paraquat 5 mM 48 hrs, 4-day adult    1 Paraquat 10 mM 48 hrs, 4-day adult    2 Rotenone 2 μg 12 hrs, larvae L3    64 Rotenone 8 μg 12 hrs, larvae L3    69 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (41) cold shock, 4-day adult  (38) heat shock, 4-day adult  (44) Cadmium 50 mM 6 hrs, larvae L3  (87) Cadmium 50 mM 12 hrs, larvae L3  (90) Cadmium 50 mM 48 hrs, 4-day adult  (54) Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3  (163) Copper 15 mM 48 hrs, 4-day adult    7 Zinc 5 mM 12 hrs, larvae L3  (136) Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    1 Ethanol 5% 3 hrs, larvae L3  (66) Ethanol 10% 3 hrs, larvae L3  (87) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (69) Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult  (37) Paraquat 5 mM 48 hrs, 4-day adult    1 Paraquat 10 mM 48 hrs, 4-day adult    2 Rotenone 2 μg 12 hrs, larvae L3  (64) Rotenone 8 μg 12 hrs, larvae L3  (69) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    41 cold shock, 4-day adult    38 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    87 Cadmium 50 mM 12 hrs, larvae L3    90 Cadmium 50 mM 48 hrs, 4-day adult    54 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3  (163) Copper 15 mM 48 hrs, 4-day adult    7 Zinc 5 mM 12 hrs, larvae L3  136 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    1 Ethanol 5% 3 hrs, larvae L3    66 Ethanol 10% 3 hrs, larvae L3    87 Caffeine 1.5 mg/ml 4 hrs, larvae L3    69 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    37 Paraquat 5 mM 48 hrs, 4-day adult    1 Paraquat 10 mM 48 hrs, 4-day adult    2 Rotenone 2 μg 12 hrs, larvae L3    64 Rotenone 8 μg 12 hrs, larvae L3    69 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    41 cold shock, 4-day adult    38 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    87 Cadmium 50 mM 12 hrs, larvae L3    90 Cadmium 50 mM 48 hrs, 4-day adult    54 Cadmium 100 mM 48 hrs, 4-day adult    1 Copper 0.5 mM 12 hrs, larvae L3    163 Copper 15 mM 48 hrs, 4-day adult    7 Zinc 5 mM 12 hrs, larvae L3    136 Zinc 4.5 mM 48 hrs, 4-day adult    15 Ethanol 2.5% 3 hrs, larvae L3    1 Ethanol 5% 3 hrs, larvae L3    66 Ethanol 10% 3 hrs, larvae L3    87 Caffeine 1.5 mg/ml 4 hrs, larvae L3    69 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    3 Caffeine 25 mg/ml 48 hrs, 4-day adult    37 Paraquat 5 mM 48 hrs, 4-day adult    1 Paraquat 10 mM 48 hrs, 4-day adult    2 Rotenone 2 μg 12 hrs, larvae L3    64 Rotenone 8 μg 12 hrs, larvae L3    69 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
External Data & Images
Linkouts	BDGP expression data • LD10058
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG43164 Class Mutagen Stocks Known lesion CG43164G18887 P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG43164 Class Mutagen Stocks Known lesion CG43164NIG.4844R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{NIG.4844R} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG43164G18887 NA
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
carbohydrate binding inferred from electronic annotation with InterPro:IPR001304 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG43164 - Atx2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - CG10077 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - CG10418 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - CG11266 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - CG15735 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - CG43444 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - CG4553 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - CG4612 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - CG7878 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - Cypl anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - Dgp-1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - Fmr1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - Gale anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - Hsc70-1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - SC35 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - SmD2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - Syp anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - Zn72D anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - btz anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - mRpL2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - mRpL44 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - mRpS24 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - nito anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - qkr54B anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - ytr anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG43164 - εCOP anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG43164 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0262720
Orthologs
OrthoDB Orthologs (17) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6DZ2FP Dipteran inclusive ortholog search EOG6MPJ0B Insect inclusive ortholog search No orthologs identified Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG6DZ2FP)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG43164     Drosophila simulans   Dsim\GD11277 Y   Drosophila simulans   Dsim\GD13709     Drosophila sechellia   Dsec\GM21786     Drosophila sechellia   Dsec\GM21788     Drosophila erecta   Dere\GG20689 Y   Drosophila yakuba   Dyak\anon-EST:fe2D7 Y   Drosophila ananassae   Dana\GF19831 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA24726 Y   Drosophila persimilis   Dper\GL11432 Y   Drosophila willistoni   Dwil\GK22905 Y   Drosophila virilis   Dvir\GJ21953 Y   Drosophila mojavensis   Dmoj\GI21026 Y   Drosophila grimshawi   Dgri\GH21409 Y
Orthologs in non-Drosophila Dipterans (EOG6MPJ0B)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL010994   Anopheles gambiae Malaria mosquito  Agam\AGAP013153   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ015743
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (20) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD11276 Drosophila simulans Dsim\GD11277 Drosophila sechellia Dsec\GM21785 Drosophila erecta Dere\GG20688 Drosophila erecta Dere\GG20689 Drosophila yakuba Dyak\anon-EST:fe2D7 Drosophila yakuba Dyak\GE11672 Drosophila ananassae Dana\GF13130 Drosophila ananassae Dana\GF19831 Drosophila pseudoobscura pseudoobscura Dpse\GA24725 Drosophila pseudoobscura pseudoobscura Dpse\GA24726 Drosophila persimilis Dper\GL11431 Drosophila persimilis Dper\GL11432 Drosophila willistoni Dwil\GK22905 Drosophila willistoni Dwil\GK22906 Drosophila virilis Dvir\GJ21952 Drosophila virilis Dvir\GJ21953 Drosophila mojavensis Dmoj\GI21026 Drosophila grimshawi Dgri\GH21408 Drosophila grimshawi Dgri\GH21409
Stocks & Reagents
Stocks Listed in FlyBase ( 1 )
Bloomington	28108 y1 w*; P{EP}CG43164G18887 CG43164G18887/CyO
Genomic Clones ( 1 )
	BACR21A09 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 304 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD10058
Other clones	DPiM_LD10058 MIP03875 MIP04175
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	LP03193 LP03338 LP04969 LP06804 LP15319 LP15325 LP17634 LP20731 LP24445 RE01463 RE17901 RE53039
Other clones	1882 8869 12973 16402 28417 33496 38524 45416 53536 56319 78672 98393 99586 103890 106050 106229 106453 122381 123783 148887 156880 158013 158532 158578 160308 160769 177639 214245.74 214279.75 214381.74 214437.83 214513.59 214539.75 275100 AA433254 CK01.8D.D3 CK01.64B.B10 CK01.100C.E2 CK01.104D.H7 CK01.106B.F6 CK01.118A.B2 CK01.128B.H7 CK01.146A.F2 EC36674 EC052333 EK014508 EK052329 EK061012 EK065137 EK088755 EK107548 EK114664 EK119953 EK120106 EK127424 EK136414 EK151112 EK170917 EK173429 EK208139 EK221314 EK221945 EK231060 EK232080 EK242105 EK244048 EK245546 EK256705 EK260737 EK261540 EK262134 EK263324 EK264230 EK302616 EP03361 EP11461 EP15660 EP16720 EP19524 EP21733 IP04292 IP04392 RP001005123 RP001009651 RP001011421 RP001015016 RP001015794 RP001016613 RP001016784 RP001018170 RP001018542 RP001020728 RP001024530 RP001025848 RP001031127 RP001040287 RP001042879 RP001056298 RP001056755 RP003004502 RP003020685 RP003034046 RP003034914 RP003042704 RP003046646 RP003046670 RP003050967 RP003060447 RP003064475 RP003067362 RP003074185 RP003077101 RP003083475 RP003085661 RP003098046 RP003098312 RP003101588 RP003106724 RP003108133 RP003113212 RP003116389 RP003125308 RP003126920 RP003136269 RP003138670 RP003145249 RP003149787 RP003152995 RP003153569 RP003154884 RP003155134 RP003160714 RP003165269 RP003165391 RP003172231 RP003174350 RP003174898 RP003189397 RP003190630 RP003192050 RP003196964 RP003204037 RP003204727 RP003209730 RP003210517 RP003211409 RP003214216 RP003226528 RP003230011 RP003230039 RP003230092 RP003234358 RP003234629 RP003236802 RP003238310 RP003238482 RP003238812 RP003238926 RP003242701 RP003250781 RP003253467 RP003256901 RP003257160 RP003259823 RP003260327 RP003262152 RP003262279 RP003267251 RP003268435 RP003271814 RP003275617 RP003276762 RP003278089 RP003282701 RP003283113 RP003283195 RP003283345 RP003288807 RP003290459 RP003291663 RP003293855 RP003299007 RP003301989 RP003302499 RP003304309 RP003308452 RP003309496 RP003311479 RP003312697 RP003313137 RP003327330 RP003328690 RP003329641 RP003330146 RP003332218 RP003337509 RP003339193 RP003340065 RP003341599 RP003343841 RP003347132 RP003347627 RP003350223 RP003352149 RP003354933 RP003357479 RP003384696 RP003393652 RP003399827 RP003406673 RP003409878 RP003423110 RP003435268 RP003453107 RP003455055 RP003458033 RP003466694 RP003470330 RP003471490 RP003471705 RP003472445 RP003475644 RP003475846 RP003481006 RP003492772 RP003501259 RP003507401 RP003511858 RP003516163 RP003534650 RP003550653 RP003552937 RP003553866 RP003560912 RP003562617 RP003564095 RP003565547 RP003565981 RP003566566 RP003573491 RP003574481 RP003574651 RP003577078 RP003577756 RP003579384 RP003582743 RP003588444 RP003589520 RP003590014 RP003602028 RP003604034 RP003604289 RP003612878 RP003613904 RP003615108 RP003616041 RP003617264 RP003617278 RP003617701 RP003622130 RP003623314 RP003625324 RP003628028 RP003628492 RP003636462 RP003641291 RP003642810 RP003643609 RP003644485 RP003645948 RP003646552 RP003653187 RP003653702 RP003655078 RP003659008 RP003660559 RP003661259 RP003661496 RP003665091 RP003669023 RP003670012 RP003671563 RP003671982 RP003672312 RP003673937 RP003676594 RP003676899 RP003681910
RNAi & Array Information
Linkouts	GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 3772015
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG18431 CG4844 (FlyBase Genome Annotators, 2011)
Additional comments	Annotations CG18431 and CG4844 (which were previously annotated as two non-overlapping open reading frames of a dicistronic transcript) merged as a single annotation (CG43164) in release 5.33 of the genome annotation. (FlyBase Genome Annotators, 2011)
Other Comments
	Quantifying rates of protein sequence divergence within and between species reveals that the Drosophila genome harbors a substantial proportion of genes with a very high divergence rate. (Schmid and Tautz, 1997)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_001032264 NM_001032265 NM_001032266 NM_001202034 NM_001259468 RefSeq (Proteins) • NP_001027435 NP_001027436 NP_001027437 NP_001188963 NP_001246397 DDBJ / EMBL / GenBank • AA391057 AA433254 AAB81490 AAF57846 AAF57846.3 AAF57851 AAF57851.1 AAF57852 AAF57852.1 AAL39541 ADV37209 AF005859 AFH08150 AW942111 AY069396 Entrez Gene - A searchable database of RefSeq genes. • 3772015 3772216 UniProtKB/TrEMBL • A1ZAU2 O16054 Q7K140
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • C-type lectin (IPR001304) C-type lectin-like (IPR016186) C-type lectin fold (IPR016187) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LD10058
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0262720 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 3772015
Synonyms & Secondary IDs ( 10 )
Reported As
Symbol Synonym	anon2D7 (Dubnau et al., 2003, Schmid, 1997.5.30) anon-EST:fe2D7   CG4844 (FlyBase Genome Annotators, 2005, FlyBase Genome Annotators, 2002-2003, Altenhein et al., 2006, Lebo et al., 2009, Japanese National Institute of Genetics, 2012.5.21) CG4844a   CG4844b   CG18431 (FlyBase Genome Annotators, 2005, FlyBase Genome Annotators, 2002-2003, ) CG33006 (Chung et al., 2011, Hurlbut et al., 2009, Burgler and Macdonald, 2005) CG43164 (FlyBase Genome Annotators, 2011) unnamed (Schmid and Tautz, 1997)
Name Synonym	anon-fast-evolving-2D7
Secondary FlyBase IDs
	FBgn0022342 FBgn0034227 FBgn0053006 FBgn0061354 FBgn0061355 FBpp0086086 FBpp0086087 FBpp0086088 FBtr0086930 FBtr0086931 FBtr0086932
References ( 21 )
Generate a list of	All references relating to this gene ( 21 )
List References by type	Research paper  ( 6 ) Supplementary material  ( 1 ) Personal communication to FlyBase  ( 4 ) FlyBase analysis  ( 5 ) DNA/RNA sequence record  ( 1 ) Stock list  ( 1 ) Website  ( 1 ) Curated genome annotation  ( 2 )
Recent research papers ( 1 )
	Chung et al., 2011, Dev. Biol. 360(1): 160--172 Trachealess (Trh) regulates all tracheal genes during Drosophila embryogenesis. [FBrf0216563] Show all research papers ...