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Gene Dmel\Glut4EF

General Information
Symbol	Dmel\Glut4EF	Species	D. melanogaster
Name	Glucose transporter 4 enhancer factor	Annotation symbol	CG34360
Feature type	protein_coding_gene	FlyBase ID	FBgn0263097
Gene Model Status	Current	Stock availability	22 publicly available
Also Known As	CG11676, stretch, CG33975, CG12802
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	85E14-85F4	Sequence location	3R:5,700,403..5,821,086 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Glucose transporter 4 enhancer factor is referred to in FlyBase by the symbol Dmel\Glut4EF (CG34360, FBgn0263097). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: zinc ion binding. There is experimental evidence that it is involved in the biological process: imaginal disc-derived wing morphogenesis. 33 alleles are reported. The phenotypes of these alleles are annotated with: mesothoracic tergum; wing. It has 8 annotated transcripts and 8 annotated polypeptides. Protein features are: Zinc finger, C2H2; Zinc finger, C2H2-like. Gene sequence location is 3R:5700403..5821086.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 85E14-85F4   Limits computationally determined from genome sequence between P{EP}CrcEP3006 and P{lacW}s2681
Experimentally Determined Cytological Location
Cytogenetic map Notes References 85F1-85F2     (BDGP Project Members, 1994-1999)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Glut4EF for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Stage-specific extension of 3' UTRs observed during embryogenesis (FBrf0215804); all variants may not be annotated. Gene model reviewed during 5.45 Gene model reviewed during 5.44 Gene model reviewed during 5.46 Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated Low-frequency RNA-Seq exon junction(s) not annotated. gene_with_stop_codon_read_through ; SO:0000697 Stop-codon suppression (UGA) postulated; FBrf0216885.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Glut4EF-RA FBtr0112576  NM_001104264   4315   741 Glut4EF-RB FBtr0112577  NM_001038952   3575   521 Glut4EF-RC FBtr0114581  NM_001144557   3418   300 Glut4EF-RD FBtr0114582  NM_001144558   4787   361 Glut4EF-RE FBtr0114583  NM_001144559   2589   137 Glut4EF-RF FBtr0305157  NM_001260083   10063   521 Glut4EF-RG FBtr0333685  NM_001275514   4308   950 Glut4EF-RH FBtr0333686  NM_001275515   10796   741
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Glut4EF-PA   FBpp0111488   81.7   741   9.13     NP_001097734   AAF54467 Glut4EF-PB   FBpp0111489   57.7   521   9.06     NP_001034041   AAF54468 Glut4EF-PC   FBpp0113073   33.1   300   9.57     NP_001138029   ACL83488 Glut4EF-PD   FBpp0113074   39.5   361   8.46     NP_001138030   ACL83489 Glut4EF-PE   FBpp0113075   14.9   137   7.32     NP_001138031   ACL83490 Glut4EF-PF   FBpp0293687   57.7   521   9.06     NP_001247012   AFH06330 Glut4EF-PG   FBpp0305838   103.4   950   8.03     NP_001262443   AGB95825 Glut4EF-PH   FBpp0305839   81.7   741   9.13     NP_001262444   AGB95826
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2 (IPR007087) Zinc finger, C2H2-like (IPR015880)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA141397   AA202061   AA567365   AA697499   AA803022   AA803024   AE014297 AAF54467   AE014297 AAF54468   AE014297 ACL83488   AE014297 ACL83489   AE014297 ACL83490   AE014297 AFH06330   AE014297 AGB95825   AE014297 AGB95826   AI292799   AI405488   AW940602   AW940979   AW941276   AY060344 AAL25383   AY060929 AAL28477   AY118631 AAM50000   BG632061   BG637641   BG640655   BI227926   BI236757   BI237037   BI238703   BI366499   BI367203   BI369369   BI483595   BI486169   BI486183   BI486188   BI565363   BI566243   BI568494   BI574142   BI578685   BI587278   BI618510   BI627382   BP554900   BP554901   BP557569   BP557570   BT003179 AAO24934   BT003612 AAO39615   BT003771   BT082034   CA803629   CK132821   CK662431   CO177819   CO187570   CO188556   CO190234   CO266126   CO267164   CO267690   CO269118   CO269159   CO270318   CO270683   CO276509   CO280439   CO282182   CO286803   CO288501   CO289250   CO291591   CO292151   CO293256   CO293304   CO298231   CO298394   CO302317   CO306932   CO313599   CO316846   CO318537   CO321866   CO324367   CO325892   CO326086   CO329655   CO332044   CO336397   CO336471   CO341272   CO342360   CO344191   CO344327   DN154402   EC056933   EC059640   EC059756   EC062223   EC063728   EC064032   EC064877   EC069391   EC070229   EC071309   EC075066   EC076936   EC078000   EC078312   EC079227   EC079968   EC080914   EC088122   EC195264   EC198250   EC198976   EC199215   EC206560   EC214688   EC215445   EC222217   EC225079   EC229899   EC230617   EC231709   EC232173   EC234012   EC234859   EC235468   EC235688   EC235731   EC244811   EC250678   EC252160   EC256772   EC258356   EC258527   EC258986   EC259644   EC261811   EC264188   EC264194   EL872158   EL872159   GH748932   GH787988   GH796002   GH798924   GH805265   GH807942   GH821601   GH825380   GH833345   GH837296   GH837662   GH880781   GH892619   GH905178   GH913665   GH915814   GH927645   GH931757   GH941738   GH944394   GH950215   GH952643
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q86NR2 Q7JR89 Q9VH51 Q8MSS6 Q9VH52 Q95T39 Q95S73
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 4 -- 6   anterior endoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi dorsal ectoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi organism | gap expression pattern   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) ventral ectoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi yolk nucleus   (Fisher et al., 2012) embryonic stage 7 -- 8   amnioserosa anlage   (Fisher et al., 2012) anterior endoderm anlage   (Fisher et al., 2012) head mesoderm   (Fisher et al., 2012) organism | gap expression pattern   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) yolk nucleus   (Fisher et al., 2012) embryonic stage 9 -- 10   amnioserosa primordium   (Fisher et al., 2012) anterior endoderm   (Fisher et al., 2012) head mesoderm   (Fisher et al., 2012) organism | segmentally repeated   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) yolk nucleus   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) embryonic stage 11 -- 12   amnioserosa   (Fisher et al., 2012) anterior midgut primordium   (Fisher et al., 2012) dorsal epidermis primordium   (Fisher et al., 2012) foregut primordium   (Fisher et al., 2012) hindgut proper primordium   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) posterior midgut primordium   (Fisher et al., 2012) procrystal cell   (Fisher et al., 2012) salivary gland body primordium   (Fisher et al., 2012) Comment:reported as salivary gland primordium yolk nucleus   (Fisher et al., 2012) embryonic stage 13 -- 16   apoptotic amnioserosa   (Fisher et al., 2012) atrium   (Fisher et al., 2012) crystal cell   (Fisher et al., 2012) embryonic dorsal epidermis   (Fisher et al., 2012) embryonic foregut   (Fisher et al., 2012) embryonic head epidermis   (Fisher et al., 2012) embryonic ventral epidermis   (Fisher et al., 2012) embryonic/larval salivary gland body   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) amnioserosa   (Fisher et al., 2012) embryonic/larval salivary gland   (Fisher et al., 2012) yolk nucleus   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    12 central nervous system, pupae P8    23 head, virgin 1-day female    37 head, virgin 4-day female    33 head, virgin 20-day female    17 head, mated 1-day female    45 head, mated 4-day female    29 head, mated 20-day female    22 head, mated 1-day male    48 head, mated 4-day male    45 head, mated 20-day male    34 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    58 digestive system, larvae L3 wandering    28 digestive system, 1-day adult    11 digestive system, 4-day adult    14 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    11 fat body, pupae P8    17 carcass, larvae L3 wandering    14 carcass, 1-day adult    34 carcass, 4-day adult    28 carcass, 20-day adult    19 ovary, virgin 4-day female    2 ovary, mated 4-day female    5 testis, mated 4-day male    1 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    12 central nervous system, pupae P8    23 head, virgin 1-day female  (37) head, virgin 4-day female  (33) head, virgin 20-day female    17 head, mated 1-day female  (45) head, mated 4-day female  (29) head, mated 20-day female    22 head, mated 1-day male  (48) head, mated 4-day male  (45) head, mated 20-day male  (34) salivary gland, larvae L3 wandering    13 salivary gland, white prepupae  (58) digestive system, larvae L3 wandering  (28) digestive system, 1-day adult    11 digestive system, 4-day adult    14 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    11 fat body, pupae P8    17 carcass, larvae L3 wandering    14 carcass, 1-day adult  (34) carcass, 4-day adult  (28) carcass, 20-day adult    19 ovary, virgin 4-day female    2 ovary, mated 4-day female    5 testis, mated 4-day male    1 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    12 central nervous system, pupae P8    23 head, virgin 1-day female    37 head, virgin 4-day female    33 head, virgin 20-day female    17 head, mated 1-day female    45 head, mated 4-day female    29 head, mated 20-day female    22 head, mated 1-day male    48 head, mated 4-day male    45 head, mated 20-day male    34 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    58 digestive system, larvae L3 wandering    28 digestive system, 1-day adult    11 digestive system, 4-day adult    14 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    11 fat body, pupae P8    17 carcass, larvae L3 wandering    14 carcass, 1-day adult    34 carcass, 4-day adult    28 carcass, 20-day adult    19 ovary, virgin 4-day female    2 ovary, mated 4-day female    5 testis, mated 4-day male    1 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    12 central nervous system, pupae P8    23 head, virgin 1-day female    37 head, virgin 4-day female    33 head, virgin 20-day female    17 head, mated 1-day female    45 head, mated 4-day female    29 head, mated 20-day female    22 head, mated 1-day male    48 head, mated 4-day male    45 head, mated 20-day male    34 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    58 digestive system, larvae L3 wandering    28 digestive system, 1-day adult    11 digestive system, 4-day adult    14 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    11 fat body, pupae P8    17 carcass, larvae L3 wandering    14 carcass, 1-day adult    34 carcass, 4-day adult    28 carcass, 20-day adult    19 ovary, virgin 4-day female    2 ovary, mated 4-day female    5 testis, mated 4-day male    1 accessory gland, mated 4-day male    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    12 central nervous system, pupae P8    23 head, virgin 1-day female    37 head, virgin 4-day female    33 head, virgin 20-day female    17 head, mated 1-day female    45 head, mated 4-day female    29 head, mated 20-day female    22 head, mated 1-day male    48 head, mated 4-day male    45 head, mated 20-day male    34 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    58 digestive system, larvae L3 wandering    28 digestive system, 1-day adult    11 digestive system, 4-day adult    14 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    11 fat body, pupae P8    17 carcass, larvae L3 wandering    14 carcass, 1-day adult    34 carcass, 4-day adult    28 carcass, 20-day adult    19 ovary, virgin 4-day female    2 ovary, mated 4-day female    5 testis, mated 4-day male    1 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    12 central nervous system, pupae P8    23 head, virgin 1-day female  (37) head, virgin 4-day female  (33) head, virgin 20-day female    17 head, mated 1-day female  (45) head, mated 4-day female  29 head, mated 20-day female    22 head, mated 1-day male  (48) head, mated 4-day male  (45) head, mated 20-day male  (34) salivary gland, larvae L3 wandering    13 salivary gland, white prepupae  (58) digestive system, larvae L3 wandering  28 digestive system, 1-day adult    11 digestive system, 4-day adult    14 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    11 fat body, pupae P8    17 carcass, larvae L3 wandering    14 carcass, 1-day adult  (34) carcass, 4-day adult  28 carcass, 20-day adult    19 ovary, virgin 4-day female    2 ovary, mated 4-day female    5 testis, mated 4-day male    1 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    12 central nervous system, pupae P8    23 head, virgin 1-day female    37 head, virgin 4-day female    33 head, virgin 20-day female    17 head, mated 1-day female    45 head, mated 4-day female    29 head, mated 20-day female    22 head, mated 1-day male    48 head, mated 4-day male    45 head, mated 20-day male    34 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    58 digestive system, larvae L3 wandering    28 digestive system, 1-day adult    11 digestive system, 4-day adult    14 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    11 fat body, pupae P8    17 carcass, larvae L3 wandering    14 carcass, 1-day adult    34 carcass, 4-day adult    28 carcass, 20-day adult    19 ovary, virgin 4-day female    2 ovary, mated 4-day female    5 testis, mated 4-day male    1 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    4 central nervous system, larvae L3    12 central nervous system, pupae P8    23 head, virgin 1-day female    37 head, virgin 4-day female    33 head, virgin 20-day female    17 head, mated 1-day female    45 head, mated 4-day female    29 head, mated 20-day female    22 head, mated 1-day male    48 head, mated 4-day male    45 head, mated 20-day male    34 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    58 digestive system, larvae L3 wandering    28 digestive system, 1-day adult    11 digestive system, 4-day adult    14 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    11 fat body, pupae P8    17 carcass, larvae L3 wandering    14 carcass, 1-day adult    34 carcass, 4-day adult    28 carcass, 20-day adult    19 ovary, virgin 4-day female    2 ovary, mated 4-day female    5 testis, mated 4-day male    1 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    3 embryo 04-06hr    9 embryo 06-08hr    13 embryo 08-10hr    14 embryo 10-12hr    16 embryo 12-14hr    21 embryo 14-16hr    28 embryo 16-18hr    40 embryo 18-20hr    46 embryo 20-22hr    21 embryo 22-24hr    25 larva L1    6 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    12 white prepupae new    12 white prepupae 12hr    6 white prepupae 24hr    5 pupae 2d postWPP    8 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    8 adult male 30day    7 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    3 embryo 04-06hr    9 embryo 06-08hr    13 embryo 08-10hr    14 embryo 10-12hr    16 embryo 12-14hr    21 embryo 14-16hr  (28) embryo 16-18hr  (40) embryo 18-20hr  (46) embryo 20-22hr    21 embryo 22-24hr    25 larva L1    6 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    12 white prepupae new    12 white prepupae 12hr    6 white prepupae 24hr    5 pupae 2d postWPP    8 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    8 adult male 30day    7 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    3 embryo 04-06hr    9 embryo 06-08hr    13 embryo 08-10hr    14 embryo 10-12hr    16 embryo 12-14hr    21 embryo 14-16hr    28 embryo 16-18hr    40 embryo 18-20hr    46 embryo 20-22hr    21 embryo 22-24hr    25 larva L1    6 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    12 white prepupae new    12 white prepupae 12hr    6 white prepupae 24hr    5 pupae 2d postWPP    8 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    8 adult male 30day    7 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    3 embryo 04-06hr    9 embryo 06-08hr    13 embryo 08-10hr    14 embryo 10-12hr    16 embryo 12-14hr    21 embryo 14-16hr    28 embryo 16-18hr    40 embryo 18-20hr    46 embryo 20-22hr    21 embryo 22-24hr    25 larva L1    6 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    12 white prepupae new    12 white prepupae 12hr    6 white prepupae 24hr    5 pupae 2d postWPP    8 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    8 adult male 30day    7 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    3 embryo 04-06hr    9 embryo 06-08hr    13 embryo 08-10hr    14 embryo 10-12hr    16 embryo 12-14hr    21 embryo 14-16hr    28 embryo 16-18hr    40 embryo 18-20hr    46 embryo 20-22hr    21 embryo 22-24hr    25 larva L1    6 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    12 white prepupae new    12 white prepupae 12hr    6 white prepupae 24hr    5 pupae 2d postWPP    8 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    8 adult male 30day    7 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    3 embryo 04-06hr    9 embryo 06-08hr    13 embryo 08-10hr    14 embryo 10-12hr    16 embryo 12-14hr    21 embryo 14-16hr  28 embryo 16-18hr  (40) embryo 18-20hr  (46) embryo 20-22hr    21 embryo 22-24hr    25 larva L1    6 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    12 white prepupae new    12 white prepupae 12hr    6 white prepupae 24hr    5 pupae 2d postWPP    8 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    8 adult male 30day    7 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    3 embryo 04-06hr    9 embryo 06-08hr    13 embryo 08-10hr    14 embryo 10-12hr    16 embryo 12-14hr    21 embryo 14-16hr    28 embryo 16-18hr    40 embryo 18-20hr    46 embryo 20-22hr    21 embryo 22-24hr    25 larva L1    6 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    12 white prepupae new    12 white prepupae 12hr    6 white prepupae 24hr    5 pupae 2d postWPP    8 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    8 adult male 30day    7 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    3 embryo 04-06hr    9 embryo 06-08hr    13 embryo 08-10hr    14 embryo 10-12hr    16 embryo 12-14hr    21 embryo 14-16hr    28 embryo 16-18hr    40 embryo 18-20hr    46 embryo 20-22hr    21 embryo 22-24hr    25 larva L1    6 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    6 larva L3 puffstage 7-9    12 white prepupae new    12 white prepupae 12hr    6 white prepupae 24hr    5 pupae 2d postWPP    8 pupae 3d postWPP    10 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    8 adult male 30day    7 adult female 01day    8 adult female 05day    4 adult female 30day    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    1 embryonic 1182-4H    5 embryonic GM2    7 embryonic Kc167    4 embryonic S1    13 embryonic S3    0 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    1 wing disc ML-DmD9    1 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    2 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    2 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    8 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    6 ovary fGS/OSS    26 ovary OSC    12 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    1 embryonic 1182-4H    5 embryonic GM2    7 embryonic Kc167    4 embryonic S1    13 embryonic S3    0 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    1 wing disc ML-DmD9    1 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    2 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    2 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    8 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    6 ovary fGS/OSS  26 ovary OSC    12 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    1 embryonic 1182-4H    5 embryonic GM2    7 embryonic Kc167    4 embryonic S1    13 embryonic S3    0 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    1 wing disc ML-DmD9    1 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    2 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    2 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    8 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    6 ovary fGS/OSS    26 ovary OSC    12 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    1 embryonic 1182-4H    5 embryonic GM2    7 embryonic Kc167    4 embryonic S1    13 embryonic S3    0 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    1 wing disc ML-DmD9    1 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    2 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    2 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    8 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    6 ovary fGS/OSS    26 ovary OSC    12 ovary OSS    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    1 embryonic 1182-4H    5 embryonic GM2    7 embryonic Kc167    4 embryonic S1    13 embryonic S3    0 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    1 wing disc ML-DmD9    1 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    2 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    2 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    8 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    6 ovary fGS/OSS    26 ovary OSC    12 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    1 embryonic 1182-4H    5 embryonic GM2    7 embryonic Kc167    4 embryonic S1    13 embryonic S3    0 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    1 wing disc ML-DmD9    1 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    2 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    2 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    8 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    6 ovary fGS/OSS  26 ovary OSC    12 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    1 embryonic 1182-4H    5 embryonic GM2    7 embryonic Kc167    4 embryonic S1    13 embryonic S3    0 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    1 wing disc ML-DmD9    1 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    2 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    2 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    8 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    6 ovary fGS/OSS    26 ovary OSC    12 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    6 Schneider line 2 Sg4    1 embryonic 1182-4H    5 embryonic GM2    7 embryonic Kc167    4 embryonic S1    13 embryonic S3    0 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    1 wing disc ML-DmD9    1 wing disc ML-DmD16-c3    13 wing disc ML-DmD21    2 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    5 eye-antennal disc ML-DmD11    2 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    8 CNS ML-DmBG2-c2    1 tumorous blood cells mbn2    6 ovary fGS/OSS    26 ovary OSC    12 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    15 heat shock, 4-day adult    6 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    7 Cadmium 100 mM 48 hrs, 4-day adult    16 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    33 Ethanol 2.5% 3 hrs, larvae L3    8 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    17 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    10 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    15 heat shock, 4-day adult    6 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    7 Cadmium 100 mM 48 hrs, 4-day adult    16 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult  (36) Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult  (33) Ethanol 2.5% 3 hrs, larvae L3    8 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    17 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    10 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    15 heat shock, 4-day adult    6 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    7 Cadmium 100 mM 48 hrs, 4-day adult    16 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    33 Ethanol 2.5% 3 hrs, larvae L3    8 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    17 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    10 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    15 heat shock, 4-day adult    6 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    7 Cadmium 100 mM 48 hrs, 4-day adult    16 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    33 Ethanol 2.5% 3 hrs, larvae L3    8 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    17 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    10 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    15 heat shock, 4-day adult    6 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    7 Cadmium 100 mM 48 hrs, 4-day adult    16 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    33 Ethanol 2.5% 3 hrs, larvae L3    8 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    17 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    10 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    15 heat shock, 4-day adult    6 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    7 Cadmium 100 mM 48 hrs, 4-day adult    16 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult  (36) Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult  (33) Ethanol 2.5% 3 hrs, larvae L3    8 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    17 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    10 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    15 heat shock, 4-day adult    6 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    7 Cadmium 100 mM 48 hrs, 4-day adult    16 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    33 Ethanol 2.5% 3 hrs, larvae L3    8 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    17 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    10 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    15 heat shock, 4-day adult    6 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    7 Cadmium 100 mM 48 hrs, 4-day adult    16 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    33 Ethanol 2.5% 3 hrs, larvae L3    8 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    2 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    17 Caffeine 25 mg/ml 48 hrs, 4-day adult    15 Paraquat 5 mM 48 hrs, 4-day adult    15 Paraquat 10 mM 48 hrs, 4-day adult    10 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_09 mE1_20_mRNA_expression_cluster_03
External Data & Images
Linkouts	BDGP expression data • GM06804 RE25317 RE66512
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | adult stage, with Scer\GAL4pnr-MD237 Glut4EFGD7360 lethal | pharate adult stage P15(ii), with Scer\GAL4pnr-MD237 Glut4EFGD7360 lethal | recessive Glut4EFA1 partially lethal - majority die Glut4EF10477 partially lethal - majority die, with Scer\GAL4pnr-MD237 Glut4EFGD10907 viable Glut4EF10477 viable, with Scer\GAL4pnr-MD237 Glut4EFGD7833 Other Phenotypes Allele visible Glut4EF10477 Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFsep visible, with Scer\GAL4pnr-MD237 Glut4EFGD10907 visible (with Df(3R)by62) Glut4EF10477 Glut4EFA1 Glut4EFAntp-R Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFsep Glut4EFTM3 visible (with Df(3R)swp2MICAL) Glut4EF10477 Glut4EFA1 Glut4EFAntp-B Glut4EFAntp-R Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFsep Glut4EFTM3 visible (with Glut4EF10477) Glut4EFA1 Glut4EFAntp-B Glut4EFAntp-R Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFsep Glut4EFTM3 visible (with Glut4EFA1) Glut4EF10477 Glut4EFAntp-R Glut4EFNP7418 Glut4EFsep Glut4EFTM3 visible (with Glut4EFAntp-B) Glut4EF10477 Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFsep Glut4EFTM3 visible (with Glut4EFAntp-R) Glut4EF10477 Glut4EFA1 Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFsep Glut4EFTM3 visible (with Glut4EFEY03156) Glut4EF10477 Glut4EFAntp-B Glut4EFAntp-R Glut4EFEY04651 Glut4EFNP7418 Glut4EFsep Glut4EFTM3 visible (with Glut4EFEY04651) Glut4EF10477 Glut4EFAntp-B Glut4EFAntp-R Glut4EFEY03156 Glut4EFNP7418 Glut4EFsep Glut4EFTM3 visible (with Glut4EFNP7418) Glut4EF10477 Glut4EFA1 Glut4EFAntp-B Glut4EFAntp-R Glut4EFEY03156 Glut4EFEY04651 Glut4EFsep Glut4EFTM3 visible (with Glut4EFsep) Glut4EF10477 Glut4EFA1 Glut4EFAntp-B Glut4EFAntp-R Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFTM3 visible (with Glut4EFTM3) Glut4EF10477 Glut4EFA1 Glut4EFAntp-B Glut4EFAntp-R Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFsep visible | recessive Glut4EF10477 Phenotype manifest in Allele mesothoracic tergum, with Scer\GAL4pnr-MD237 Glut4EFGD10907 wing Glut4EF10477 Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFsep wing (with Df(3R)by62) Glut4EF10477 Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFTM3 Glut4EFsep Glut4EFA1 Glut4EFAntp-R wing (with Df(3R)swp2MICAL) Glut4EF10477 Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFTM3 Glut4EFsep Glut4EFA1 Glut4EFAntp-R Glut4EFAntp-B wing (with Glut4EF10477) Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFTM3 Glut4EFsep Glut4EFA1 Glut4EFAntp-R Glut4EFAntp-B wing (with Glut4EFA1) Glut4EF10477 Glut4EFNP7418 Glut4EFTM3 Glut4EFsep Glut4EFAntp-R wing (with Glut4EFAntp-B) Glut4EF10477 Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFTM3 Glut4EFsep wing (with Glut4EFAntp-R) Glut4EF10477 Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFTM3 Glut4EFsep Glut4EFA1 wing (with Glut4EFEY03156) Glut4EF10477 Glut4EFEY04651 Glut4EFNP7418 Glut4EFTM3 Glut4EFsep Glut4EFAntp-R Glut4EFAntp-B wing (with Glut4EFEY04651) Glut4EF10477 Glut4EFEY03156 Glut4EFNP7418 Glut4EFTM3 Glut4EFsep Glut4EFAntp-R Glut4EFAntp-B wing (with Glut4EFNP7418) Glut4EF10477 Glut4EFEY03156 Glut4EFEY04651 Glut4EFTM3 Glut4EFsep Glut4EFA1 Glut4EFAntp-R Glut4EFAntp-B wing (with Glut4EFsep) Glut4EF10477 Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFTM3 Glut4EFA1 Glut4EFAntp-R Glut4EFAntp-B wing (with Glut4EFTM3) Glut4EF10477 Glut4EFEY03156 Glut4EFEY04651 Glut4EFNP7418 Glut4EFsep Glut4EFA1 Glut4EFAntp-R Glut4EFAntp-B
Classical Alleles ( 24 )
For All Classical Alleles Show
Allele of Glut4EF Class Mutagen Stocks Known lesion Glut4EFd05324 1 -- Glut4EFd05708 1 -- Glut4EFd11665 1 -- Glut4EFe00247 1 -- Glut4EFe01017 1 -- Glut4EFe01231 1 -- Glut4EFe02860 1 -- Glut4EFEY03156 1 Yes Glut4EFEY04651 1 Yes Glut4EFf02615 1 -- Glut4EFf03808 1 -- Glut4EFMB03996 1 -- Glut4EFMI01176 1 -- Glut4EFMI04490 1 -- Glut4EFMI07274 1 -- Glut4EFNP7418 1 Yes Glut4EF10477 0 Yes Glut4EFA1 0 -- Glut4EFAntp-B 0 -- Glut4EFAntp-R 0 -- Glut4EFd09854 0 -- Glut4EFDG29502 P-element activity 0 -- Glut4EFsep 0 -- Glut4EFTM3 0 --
Alleles Carried on Transgenic Constructs ( 9 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Glut4EF Class Mutagen Stocks Known lesion Glut4EFGD7360 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes Glut4EFGD10907 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Glut4EFKK108834 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Glut4EFKK112339 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Glut4EFKK112881 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Glut4EFd.Scer\UAS in vitro construct - regulatory fusion 0 Yes Glut4EFGD7833 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes Glut4EFNIG.11676R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes Glut4EFNIG.12802R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)by62 (Yazdani et al., 2008) Df(3R)Exel6154 (Ryder, 2004.4.26) Df(3R)Exel6155 (Ryder, 2004.4.26) Df(3R)swp2MICAL (Terman et al., 2002, Yazdani et al., 2008) Df(3R)swp4 (Terman et al., 2002) Df(3R)swp7 (Terman et al., 2002) Df(3R)swp11 (Terman et al., 2002) Df(3R)swp38 (Terman et al., 2002)
Not disrupted in	Df(3R)by10 (Yazdani et al., 2008) In(3LR)TM6B (Yazdani et al., 2008) Tp(3;2)by62 (BDGP Project Members, 1994-1999)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{NIG.11676R} NA P{NIG.12802R} NA P{UAS-Glut4EF.d} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}Glut4EFEY03156 NA P{EPgy2}Glut4EFEY04651 NA P{XP}Glut4EFd05324 NA P{XP}Glut4EFd05708 NA P{XP}Glut4EFd09854 NA P{XP}Glut4EFd11665 NA miscellaneous insertions Mi{MIC}CG34360MI07274 NA Mi{MIC}Glut4EFMI01176 NA Mi{MIC}Glut4EFMI04490 NA P{Dpse82}Glut4EFA1 NA P{wHy}Glut4EFDG29502 NA PBac{RB}Glut4EFe00247 NA PBac{RB}Glut4EFe01017 NA PBac{RB}Glut4EFe01231 NA PBac{RB}Glut4EFe02860 NA PBac{WH}Glut4EFf02615 NA PBac{WH}Glut4EFf03808 NA insertion of enhancer trap binary system Mi{ET1}Glut4EFMB03996 No P{GawB}Glut4EFNP7418 No insertion of enhancer trap P{PZ}Glut4EF10477 No
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
imaginal disc-derived wing morphogenesis inferred from mutant phenotype (Carreira et al., 2011)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
zinc ion binding inferred from electronic annotation with InterPro:IPR007087, InterPro:IPR015880 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	gene_with_stop_codon_read_through (FlyBase Genome Annotators, 2012) nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
Glut4EF - slmb anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Glut4EF allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0263097
Orthologs
OrthoDB Orthologs (15) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG65QJ0H Dipteran inclusive ortholog search EOG64BBB7 Insect inclusive ortholog search No orthologs identified Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG65QJ0H)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Glut4EF     Drosophila simulans   Dsim\GD18656     Drosophila sechellia   Dsec\GM23848     Drosophila erecta   Dere\GG17269     Drosophila yakuba   Dyak\GE25999     Drosophila ananassae   Dana\GF17848     Drosophila pseudoobscura pseudoobscura   Dpse\GA30116     Drosophila persimilis   Dper\GL27195     Drosophila willistoni   Dwil\GK12758     Drosophila willistoni   Dwil\GK12762     Drosophila virilis   Dvir\GJ23029     Drosophila mojavensis   Dmoj\GI10677     Drosophila grimshawi   Dgri\GH14145
Orthologs in non-Drosophila Dipterans (EOG64BBB7)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Anopheles gambiae Malaria mosquito  Agam\AGAP013095   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ016863
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
Stocks & Reagents
Stocks Listed in FlyBase ( 22 )
Harvard	- P{XP}Glut4EFd05324 - P{XP}Glut4EFd05708 - P{XP}Glut4EFd11665 - PBac{RB}Glut4EFe00247 - PBac{RB}Glut4EFe01017 - PBac{RB}Glut4EFe01231 - PBac{RB}Glut4EFe02860 - PBac{WH}Glut4EFf02615
VDRC	v101486 P{KK108834}VIE-260B v102749 P{KK112339}VIE-260B v105014 P{KK112881}VIE-260B v16264 w1118 P{GD7360}v16264
	More stocks available...
Genomic Clones ( 3 )
	BACR06O03 BACR23O04 BACR39F04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 146 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH15792 GH25505 GM06804 RE25317 RE66512 RH63124
Other clones	DPiM_RH63124 MIP04352
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH02348 GM06802 HL02652 RE32867 RE33183 RE35222 RE52051 RE52914 RE55533 RE69554 RE69571 RE69577 RE72583 RH27814 RH35441 RH40060 RH49362 RH68675 SD11786
Other clones	563 14698 34324 34637 38467 39909 44313 48360 60454 70474 71472 73286 73314 73904 77241 98132 102322 107401 119549 145384 161753 163165 172454 190771 214321.65 214343.37 214501.51 214511.40 214533.38 214545.38 274771 522497 557815 557886 CK01.3D.E9 CK01.8C.C8 CK01.35D.F4 CK01.48D.E7 CK01.55D.G12 CK01.58C.F3 CK01.61B.E3 CK01.87A.B4 CK01.89C.H10 CK01.122D.E12 CK01.123A.C2 CK01.127D.F1 CK01.128C.H10 CK01677 EK030441 EK040920 EK047522 EK054360 EK063918 EK068638 EK070547 EK093650 EK093741 EK098516 EK099761 EK121211 EK145011 EK148928 EK151523 EK154057 EK159736 EK172561 EK172910 EK183904 EK186560 EK193404 EK197732 EK199330 EK202248 EK202526 EK233528 EK239025 EK252820 EK266033 EK272644 EK293333 EK302355 EN12444 EN12611 EP02851 EP03218 EP12142 EP14557 EP18827 EP19051 ESG011d.E21_D11 FGM232C12 FGM310A08 HL01067 IP04129 LD03668 LP22653 RH21676 RP003009729 RP003054712 RP003056120 RP003096333 RP003212056 RP003246293 RP003253073 RP003284410 RP003417729 RP003428649 RP003428962 RP003449132 RP003473388 RP003481599 RP003490224 RP003561055 RP003602296 RP003669965 RP004141268 RP004175403 RP004241811 RP004262724
RNAi & Array Information
Linkouts	GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41217
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG12802 BcDNA:RE66512 (FlyBase, 1996-, FlyBase Genome Annotators, 2005) Source for merge of: CG12802 CG33975 (FlyBase Genome Annotators, 2007) Source for merge of: CG12804 CG12805 (FlyBase Genome Annotators, 2002-2003) Source for merge of: CG32469 BcDNA:RH63124 (FlyBase, 1996-) Source for merge of: CG34360 BcDNA:GH25505 (FlyBase, 1996-) Source for merge of: CG34360 BcDNA:GM06804 (FlyBase, 1996-) Source for merge of: stretch CG34360 (Yazdani et al., 2008)
Additional comments	One or more of the processed transcripts for these genes contain two non-overlapping open reading frames (ORFs). The non-overlapping ORFs are represented by CG34360 (FBgn0263097), CG43757 (FBgn0264088). (FlyBase Genome Annotators, 2012) Annotations CG12802 and CG33975 merged as CG34360 in release 5.2 of the genome annotation. (FlyBase Genome Annotators, 2007) Annotations CG12804 and CG12805 merged as CG32469 in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003) Source for merge of CG12802 BcDNA:RE66512 was a shared cDNA (date:030728). (FlyBase, 1996-, FlyBase Genome Annotators, 2005) Source for merge of CG32469 BcDNA:RH63124 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
	Glut4EF is required for normal wing positioning. (Yazdani et al., 2008)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_001038952 NM_001104264 NM_001144557 NM_001144558 NM_001144559 NM_001260083 NM_001275514 NM_001275515 RefSeq (Proteins) • NP_001034041 NP_001097734 NP_001138029 NP_001138030 NP_001138031 NP_001247012 NP_001262443 NP_001262444 DDBJ / EMBL / GenBank • AA202061 AA803024 AAF54467 AAF54468 AAF54468.2 AAF54472.2 AAL25383 AAL28477 AAM50000 AAO24934 AAO39615 ACL83488 ACL83489 ACL83490 AFH06330 AGB95825 AGB95826 AI292799 AI405488 AW940602 AW940979 AW941276 AY060344 AY060929 AY118631 BI227926 BI483595 BI565363 BT003179 BT003612 Entrez Gene - A searchable database of RefSeq genes. • 41217 UniProtKB/TrEMBL • Q7JR89 Q8MSS6 Q9VH51 Q9VH52 Q86NR2 Q95S73 Q95T39
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2 (IPR007087) Zinc finger, C2H2-like (IPR015880) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • GM06804 RE25317 RE66512
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0263097 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41217
Synonyms & Secondary IDs ( 16 )
Reported As
Symbol Synonym	BcDNA:GH25505   BcDNA:GM06804   BcDNA:RE66512   BcDNA:RH63124   CG11676 (Beuchle et al., 2007, Giot et al., 2003, Bianchi-Frias et al., 2004, Yazdani et al., 2008) CG12802 (Yazdani et al., 2008, Kazemian et al., 2010) CG12804   CG12805   CG32469 (Yazdani et al., 2008) CG33975 (Urwyler et al., 2007, Yazdani et al., 2008) CG34360 (Keleman et al., 2009.8.5, FlyBase Genome Annotators, 2007, Hilgers et al., 2011, Jungreis, 2011.11.18, Luo et al., 2011, Carreira et al., 2011, Japanese National Institute of Genetics, 2012.5.21, Smibert et al., 2012) D-Glut4EF (Yazdani et al., 2008) Glut4EF (FlyBase Genome Annotators, 2012) stretch (Terman et al., 2002, Yazdani et al., 2008)
Name Synonym	BcDNA:GH25505   BcDNA:GM06804   CG12802   CG33975   Glucose transporter 4 enhancer factor (Yazdani et al., 2008) stretched out (Terman et al., 2002, Yazdani et al., 2008)
Secondary FlyBase IDs
	FBgn0010943 FBgn0037767 FBgn0037768 FBgn0037771 FBgn0040537 FBgn0046785 FBgn0047268 FBgn0052469 FBgn0053975 FBgn0062980 FBgn0064791 FBgn0085389 FBgn0250818 FBgn0262953 FBpp0081625 FBpp0081627 FBtr0082147 FBtr0082149
References ( 43 )
Generate a list of	All references relating to this gene ( 43 )
List References by type	Research paper  ( 11 ) Supplementary material  ( 6 ) Personal communication to FlyBase  ( 15 ) FlyBase analysis  ( 8 ) Stock list  ( 1 ) Website  ( 1 ) Curated genome annotation  ( 1 )
Recent research papers ( 4 )
	Weber et al., 2012, PLoS ONE 7(4): e34745 Genome-Wide Association Analysis of Oxidative Stress Resistance in Drosophila melanogaster. [FBrf0218073] Carreira et al., 2011, BMC Dev. Biol. 11: 32 Genetic basis of wing morphogenesis in Drosophila: sexual dimorphism and non-allometric effects of shape variation. [FBrf0214273] Hilgers et al., 2011, Proc. Natl. Acad. Sci. U.S.A. 108(38): 15864--15869 Neural-specific elongation of 3' UTRs during Drosophila development. [FBrf0215804] Luo et al., 2011, Development 138(13): 2761--2771 Direct targets of the D. melanogaster DSXF protein and the evolution of sexual development. [FBrf0213878] Show all research papers ...