A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\Mrp4

General Information
SymbolDmel\Mrp4SpeciesD. melanogaster
NameMultidrug resistance protein 4 orthologAnnotation symbolCG14709
Feature typeprotein_coding_geneFlyBase IDFBgn0263316
Gene Model StatusCurrent Stock availability 11 publicly available
Also Known AsBEST:CK01227
Genomic Location
Chromosome (arm)3RRecombination map
Cytogenetic map86E11-86E11Sequence location3R:7,394,972..7,401,659 [+]

Genomic Maps

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Automatically generated summary

See sections below for more information
The gene Multidrug resistance protein 4 ortholog is referred to in FlyBase by the symbol Dmel\Mrp4 (CG14709, FBgn0263316). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: ATPase activity, coupled to transmembrane movement of substances; organic anion transmembrane transporter activity. There is experimental evidence that it is involved in the biological process: response to hypoxia; response to anoxia; wing disc dorsal/ventral pattern formation. 21 alleles are reported. The phenotype of these alleles is annotated with: intersegmental nerve. It has one annotated transcript and one annotated polypeptide. Protein features are: AAA+ ATPase domain; ABC transporter, conserved site; ABC transporter, integral membrane type 1; ABC transporter, transmembrane domain; ABC transporter, transmembrane domain, type 1; ABC transporter-like. Gene sequence location is 3R:7394972..7401659.

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Description
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FB2013_03
FB2013_02
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FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
86E11-86E11  
Limits computationally determined from genome sequence between P{PZ}tho1&P{PZ}l(3)0462905275 and P{EP}Lk6EP886  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
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Please see the GBrowse view of Dmel\Mrp4 for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0302027 FBtr0082460 FBpp0291237 FBpp0081936 FBti0046320 FBti0068692 FBti0054848 FBti0103295 FBti0066626 FBti0047900 FBti0109322 FBti0007822 FBti0068548 FBti0068559 FBti0034508 FBti0108720 FBti0034013 FBti0103408 FBti0033481 FBti0111606 FBti0100861 FBti0110302 FBti0011322 FBti0113277 FBti0107255 FBti0011356 FBti0011394 FBti0108273 FBti0029531 FBti0099986 FBti0035539 FBti0103637 FBti0102871 FBti0070388 FBti0070326 FBti0037136 FBti0037139 FBti0033529 FBti0059214 FBti0033939 FBti0100851 FBti0011484 FBti0111970 FBti0105658 FBti0068422 FBti0057478 FBti0033547 FBti0105765 FBti0035932 FBti0069269 FBti0029989 FBti0057360 FBti0030131 FBti0112016 FBti0043538 FBti0011743 FBti0104892 FBti0106698 FBti0036621 FBti0030244 FBti0059435 FBti0021617 FBti0109014 FBti0029409 FBti0104647 FBti0034409 FBti0055828 FBti0106710 FBti0037118 FBti0072517 FBti0028670 FBti0107586 FBti0043117 FBti0127449 FBti0107999
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0302027
  4726
  1316
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0291237  
147.9  
1316  
7.64  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 2
central nervous system, pupae P8
 
 5
head, virgin 1-day female
 
 3
head, virgin 4-day female
 
 3
head, virgin 20-day female
 
 6
head, mated 1-day female
 
 3
head, mated 4-day female
 
 5
head, mated 20-day female
 
 4
head, mated 1-day male
 
 5
head, mated 4-day male
 
 5
head, mated 20-day male
 
 9
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 2
digestive system, 1-day adult
 
 8
digestive system, 4-day adult
 
 8
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 1
fat body, pupae P8
 
 2
carcass, larvae L3 wandering
 
 3
carcass, 1-day adult
 
 4
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 5
ovary, virgin 4-day female
 
 1
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 1
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 2
central nervous system, pupae P8
 
 5
head, virgin 1-day female
 
 3
head, virgin 4-day female
 
 3
head, virgin 20-day female
 
 6
head, mated 1-day female
 
 3
head, mated 4-day female
 
 5
head, mated 20-day female
 
 4
head, mated 1-day male
 
 5
head, mated 4-day male
 
 5
head, mated 20-day male
 
 9
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 2
digestive system, 1-day adult
 
 8
digestive system, 4-day adult
 
 8
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 1
fat body, pupae P8
 
 2
carcass, larvae L3 wandering
 
 3
carcass, 1-day adult
 
 4
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 5
ovary, virgin 4-day female
 
 1
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 1
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 2
central nervous system, pupae P8
 
 5
head, virgin 1-day female
 
 3
head, virgin 4-day female
 
 3
head, virgin 20-day female
 
 6
head, mated 1-day female
 
 3
head, mated 4-day female
 
 5
head, mated 20-day female
 
 4
head, mated 1-day male
 
 5
head, mated 4-day male
 
 5
head, mated 20-day male
 
 9
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 2
digestive system, 1-day adult
 
 8
digestive system, 4-day adult
 
 8
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 1
fat body, pupae P8
 
 2
carcass, larvae L3 wandering
 
 3
carcass, 1-day adult
 
 4
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 5
ovary, virgin 4-day female
 
 1
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 1
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 2
central nervous system, pupae P8
 
 5
head, virgin 1-day female
 
 3
head, virgin 4-day female
 
 3
head, virgin 20-day female
 
 6
head, mated 1-day female
 
 3
head, mated 4-day female
 
 5
head, mated 20-day female
 
 4
head, mated 1-day male
 
 5
head, mated 4-day male
 
 5
head, mated 20-day male
 
 9
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 2
digestive system, 1-day adult
 
 8
digestive system, 4-day adult
 
 8
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 1
fat body, pupae P8
 
 2
carcass, larvae L3 wandering
 
 3
carcass, 1-day adult
 
 4
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 5
ovary, virgin 4-day female
 
 1
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 1
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 2
central nervous system, pupae P8
 
 5
head, virgin 1-day female
 
 3
head, virgin 4-day female
 
 3
head, virgin 20-day female
 
 6
head, mated 1-day female
 
 3
head, mated 4-day female
 
 5
head, mated 20-day female
 
 4
head, mated 1-day male
 
 5
head, mated 4-day male
 
 5
head, mated 20-day male
 
 9
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 2
digestive system, 1-day adult
 
 8
digestive system, 4-day adult
 
 8
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 1
fat body, pupae P8
 
 2
carcass, larvae L3 wandering
 
 3
carcass, 1-day adult
 
 4
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 5
ovary, virgin 4-day female
 
 1
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 1
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 2
central nervous system, pupae P8
 
 5
head, virgin 1-day female
 
 3
head, virgin 4-day female
 
 3
head, virgin 20-day female
 
 6
head, mated 1-day female
 
 3
head, mated 4-day female
 
 5
head, mated 20-day female
 
 4
head, mated 1-day male
 
 5
head, mated 4-day male
 
 5
head, mated 20-day male
 
 9
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 2
digestive system, 1-day adult
 
 8
digestive system, 4-day adult
 
 8
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 1
fat body, pupae P8
 
 2
carcass, larvae L3 wandering
 
 3
carcass, 1-day adult
 
 4
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 5
ovary, virgin 4-day female
 
 1
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 1
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 2
central nervous system, pupae P8
 
 5
head, virgin 1-day female
 
 3
head, virgin 4-day female
 
 3
head, virgin 20-day female
 
 6
head, mated 1-day female
 
 3
head, mated 4-day female
 
 5
head, mated 20-day female
 
 4
head, mated 1-day male
 
 5
head, mated 4-day male
 
 5
head, mated 20-day male
 
 9
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 2
digestive system, 1-day adult
 
 8
digestive system, 4-day adult
 
 8
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 1
fat body, pupae P8
 
 2
carcass, larvae L3 wandering
 
 3
carcass, 1-day adult
 
 4
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 5
ovary, virgin 4-day female
 
 1
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 1
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 2
central nervous system, pupae P8
 
 5
head, virgin 1-day female
 
 3
head, virgin 4-day female
 
 3
head, virgin 20-day female
 
 6
head, mated 1-day female
 
 3
head, mated 4-day female
 
 5
head, mated 20-day female
 
 4
head, mated 1-day male
 
 5
head, mated 4-day male
 
 5
head, mated 20-day male
 
 9
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 0
digestive system, larvae L3 wandering
 
 2
digestive system, 1-day adult
 
 8
digestive system, 4-day adult
 
 8
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 2
fat body, white prepupae
 
 1
fat body, pupae P8
 
 2
carcass, larvae L3 wandering
 
 3
carcass, 1-day adult
 
 4
carcass, 4-day adult
 
 4
carcass, 20-day adult
 
 5
ovary, virgin 4-day female
 
 1
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 1
accessory gland, mated 4-day male
 
 2
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 6
embryo 04-06hr
 
 4
embryo 06-08hr
 
 4
embryo 08-10hr
 
 7
embryo 10-12hr
 
 12
embryo 12-14hr
 
 22
embryo 14-16hr
 
 33
embryo 16-18hr
 
 42
embryo 18-20hr
 
 43
embryo 20-22hr
 
 23
embryo 22-24hr
 
 36
larva L1
 
 22
larva L2
 
 18
larva L3 12hr old
 
 20
larva L3 puffstage 1-2
 
 6
larva L3 puffstage 3-6
 
 5
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 11
white prepupae 12hr
 
 11
white prepupae 24hr
 
 8
pupae 2d postWPP
 
 11
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 13
adult male 01day
 
 9
adult male 05day
 
 8
adult male 30day
 
 9
adult female 01day
 
 7
adult female 05day
 
 4
adult female 30day
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 6
embryo 04-06hr
 
 4
embryo 06-08hr
 
 4
embryo 08-10hr
 
 7
embryo 10-12hr
 
 12
embryo 12-14hr
 
 22
embryo 14-16hr
 (33)
embryo 16-18hr
 (42)
embryo 18-20hr
 (43)
embryo 20-22hr
 
 23
embryo 22-24hr
 (36)
larva L1
 
 22
larva L2
 
 18
larva L3 12hr old
 
 20
larva L3 puffstage 1-2
 
 6
larva L3 puffstage 3-6
 
 5
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 11
white prepupae 12hr
 
 11
white prepupae 24hr
 
 8
pupae 2d postWPP
 
 11
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 13
adult male 01day
 
 9
adult male 05day
 
 8
adult male 30day
 
 9
adult female 01day
 
 7
adult female 05day
 
 4
adult female 30day
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 6
embryo 04-06hr
 
 4
embryo 06-08hr
 
 4
embryo 08-10hr
 
 7
embryo 10-12hr
 
 12
embryo 12-14hr
 
 22
embryo 14-16hr
 
 33
embryo 16-18hr
 
 42
embryo 18-20hr
 
 43
embryo 20-22hr
 
 23
embryo 22-24hr
 
 36
larva L1
 
 22
larva L2
 
 18
larva L3 12hr old
 
 20
larva L3 puffstage 1-2
 
 6
larva L3 puffstage 3-6
 
 5
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 11
white prepupae 12hr
 
 11
white prepupae 24hr
 
 8
pupae 2d postWPP
 
 11
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 13
adult male 01day
 
 9
adult male 05day
 
 8
adult male 30day
 
 9
adult female 01day
 
 7
adult female 05day
 
 4
adult female 30day
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 6
embryo 04-06hr
 
 4
embryo 06-08hr
 
 4
embryo 08-10hr
 
 7
embryo 10-12hr
 
 12
embryo 12-14hr
 
 22
embryo 14-16hr
 
 33
embryo 16-18hr
 
 42
embryo 18-20hr
 
 43
embryo 20-22hr
 
 23
embryo 22-24hr
 
 36
larva L1
 
 22
larva L2
 
 18
larva L3 12hr old
 
 20
larva L3 puffstage 1-2
 
 6
larva L3 puffstage 3-6
 
 5
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 11
white prepupae 12hr
 
 11
white prepupae 24hr
 
 8
pupae 2d postWPP
 
 11
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 13
adult male 01day
 
 9
adult male 05day
 
 8
adult male 30day
 
 9
adult female 01day
 
 7
adult female 05day
 
 4
adult female 30day
 
 4
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 6
embryo 04-06hr
 
 4
embryo 06-08hr
 
 4
embryo 08-10hr
 
 7
embryo 10-12hr
 
 12
embryo 12-14hr
 
 22
embryo 14-16hr
 
 33
embryo 16-18hr
 
 42
embryo 18-20hr
 
 43
embryo 20-22hr
 
 23
embryo 22-24hr
 
 36
larva L1
 
 22
larva L2
 
 18
larva L3 12hr old
 
 20
larva L3 puffstage 1-2
 
 6
larva L3 puffstage 3-6
 
 5
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 11
white prepupae 12hr
 
 11
white prepupae 24hr
 
 8
pupae 2d postWPP
 
 11
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 13
adult male 01day
 
 9
adult male 05day
 
 8
adult male 30day
 
 9
adult female 01day
 
 7
adult female 05day
 
 4
adult female 30day
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 6
embryo 04-06hr
 
 4
embryo 06-08hr
 
 4
embryo 08-10hr
 
 7
embryo 10-12hr
 
 12
embryo 12-14hr
 
 22
embryo 14-16hr
 (33)
embryo 16-18hr
 (42)
embryo 18-20hr
 (43)
embryo 20-22hr
 
 23
embryo 22-24hr
 (36)
larva L1
 
 22
larva L2
 
 18
larva L3 12hr old
 
 20
larva L3 puffstage 1-2
 
 6
larva L3 puffstage 3-6
 
 5
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 11
white prepupae 12hr
 
 11
white prepupae 24hr
 
 8
pupae 2d postWPP
 
 11
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 13
adult male 01day
 
 9
adult male 05day
 
 8
adult male 30day
 
 9
adult female 01day
 
 7
adult female 05day
 
 4
adult female 30day
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 6
embryo 04-06hr
 
 4
embryo 06-08hr
 
 4
embryo 08-10hr
 
 7
embryo 10-12hr
 
 12
embryo 12-14hr
 
 22
embryo 14-16hr
 
 33
embryo 16-18hr
 
 42
embryo 18-20hr
 
 43
embryo 20-22hr
 
 23
embryo 22-24hr
 
 36
larva L1
 
 22
larva L2
 
 18
larva L3 12hr old
 
 20
larva L3 puffstage 1-2
 
 6
larva L3 puffstage 3-6
 
 5
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 11
white prepupae 12hr
 
 11
white prepupae 24hr
 
 8
pupae 2d postWPP
 
 11
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 13
adult male 01day
 
 9
adult male 05day
 
 8
adult male 30day
 
 9
adult female 01day
 
 7
adult female 05day
 
 4
adult female 30day
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 1
embryo 02-04hr
 
 6
embryo 04-06hr
 
 4
embryo 06-08hr
 
 4
embryo 08-10hr
 
 7
embryo 10-12hr
 
 12
embryo 12-14hr
 
 22
embryo 14-16hr
 
 33
embryo 16-18hr
 
 42
embryo 18-20hr
 
 43
embryo 20-22hr
 
 23
embryo 22-24hr
 
 36
larva L1
 
 22
larva L2
 
 18
larva L3 12hr old
 
 20
larva L3 puffstage 1-2
 
 6
larva L3 puffstage 3-6
 
 5
larva L3 puffstage 7-9
 
 4
white prepupae new
 
 11
white prepupae 12hr
 
 11
white prepupae 24hr
 
 8
pupae 2d postWPP
 
 11
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 13
adult male 01day
 
 9
adult male 05day
 
 8
adult male 30day
 
 9
adult female 01day
 
 7
adult female 05day
 
 4
adult female 30day
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 28
Schneider line 2 Sg4
 
 43
embryonic 1182-4H
 
 34
embryonic GM2
 
 89
embryonic Kc167
 
 89
embryonic S1
 
 21
embryonic S3
 
 29
leg disc CME L1
 
 48
wing disc CME-W2
 
 75
wing disc ML-DmD8
 
 18
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 10
wing disc ML-DmD21
 
 5
wing disc ML-DmD32
 
 20
haltere disc ML-DmD17-c3
 
 8
eye-antennal disc ML-DmD11
 
 8
antennal disc ML-DmD20-c5
 
 15
mixed discs ML-DmD4-c1
 
 15
CNS ML-DmBG1-c1
 
 10
CNS ML-DmBG2-c2
 
 100
tumorous blood cells mbn2
 
 88
ovary fGS/OSS
 
 36
ovary OSC
 
 19
ovary OSS
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 (28)
Schneider line 2 Sg4
 (43)
embryonic 1182-4H
 (34)
embryonic GM2
 (89)
embryonic Kc167
 (89)
embryonic S1
 
 21
embryonic S3
 (29)
leg disc CME L1
 (48)
wing disc CME-W2
 (75)
wing disc ML-DmD8
 
 18
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 10
wing disc ML-DmD21
 
 5
wing disc ML-DmD32
 
 20
haltere disc ML-DmD17-c3
 
 8
eye-antennal disc ML-DmD11
 
 8
antennal disc ML-DmD20-c5
 
 15
mixed discs ML-DmD4-c1
 
 15
CNS ML-DmBG1-c1
 
 10
CNS ML-DmBG2-c2
 (100)
tumorous blood cells mbn2
 (88)
ovary fGS/OSS
 (36)
ovary OSC
 
 19
ovary OSS
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 28
Schneider line 2 Sg4
 
 43
embryonic 1182-4H
 
 34
embryonic GM2
 
 89
embryonic Kc167
 
 89
embryonic S1
 
 21
embryonic S3
 
 29
leg disc CME L1
 
 48
wing disc CME-W2
 
 75
wing disc ML-DmD8
 
 18
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 10
wing disc ML-DmD21
 
 5
wing disc ML-DmD32
 
 20
haltere disc ML-DmD17-c3
 
 8
eye-antennal disc ML-DmD11
 
 8
antennal disc ML-DmD20-c5
 
 15
mixed discs ML-DmD4-c1
 
 15
CNS ML-DmBG1-c1
 
 10
CNS ML-DmBG2-c2
 
 100
tumorous blood cells mbn2
 
 88
ovary fGS/OSS
 
 36
ovary OSC
 
 19
ovary OSS
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 28
Schneider line 2 Sg4
 
 43
embryonic 1182-4H
 
 34
embryonic GM2
 
 89
embryonic Kc167
 
 89
embryonic S1
 
 21
embryonic S3
 
 29
leg disc CME L1
 
 48
wing disc CME-W2
 
 75
wing disc ML-DmD8
 
 18
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 10
wing disc ML-DmD21
 
 5
wing disc ML-DmD32
 
 20
haltere disc ML-DmD17-c3
 
 8
eye-antennal disc ML-DmD11
 
 8
antennal disc ML-DmD20-c5
 
 15
mixed discs ML-DmD4-c1
 
 15
CNS ML-DmBG1-c1
 
 10
CNS ML-DmBG2-c2
 
 100
tumorous blood cells mbn2
 
 88
ovary fGS/OSS
 
 36
ovary OSC
 
 19
ovary OSS
 
 4
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 28
Schneider line 2 Sg4
 
 43
embryonic 1182-4H
 
 34
embryonic GM2
 
 89
embryonic Kc167
 
 89
embryonic S1
 
 21
embryonic S3
 
 29
leg disc CME L1
 
 48
wing disc CME-W2
 
 75
wing disc ML-DmD8
 
 18
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 10
wing disc ML-DmD21
 
 5
wing disc ML-DmD32
 
 20
haltere disc ML-DmD17-c3
 
 8
eye-antennal disc ML-DmD11
 
 8
antennal disc ML-DmD20-c5
 
 15
mixed discs ML-DmD4-c1
 
 15
CNS ML-DmBG1-c1
 
 10
CNS ML-DmBG2-c2
 
 100
tumorous blood cells mbn2
 
 88
ovary fGS/OSS
 
 36
ovary OSC
 
 19
ovary OSS
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 28
Schneider line 2 Sg4
 (43)
embryonic 1182-4H
 (34)
embryonic GM2
 (89)
embryonic Kc167
 (89)
embryonic S1
 
 21
embryonic S3
 29
leg disc CME L1
 (48)
wing disc CME-W2
 (75)
wing disc ML-DmD8
 
 18
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 10
wing disc ML-DmD21
 
 5
wing disc ML-DmD32
 
 20
haltere disc ML-DmD17-c3
 
 8
eye-antennal disc ML-DmD11
 
 8
antennal disc ML-DmD20-c5
 
 15
mixed discs ML-DmD4-c1
 
 15
CNS ML-DmBG1-c1
 
 10
CNS ML-DmBG2-c2
 (100)
tumorous blood cells mbn2
 (88)
ovary fGS/OSS
 (36)
ovary OSC
 
 19
ovary OSS
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 28
Schneider line 2 Sg4
 
 43
embryonic 1182-4H
 
 34
embryonic GM2
 
 89
embryonic Kc167
 
 89
embryonic S1
 
 21
embryonic S3
 
 29
leg disc CME L1
 
 48
wing disc CME-W2
 
 75
wing disc ML-DmD8
 
 18
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 10
wing disc ML-DmD21
 
 5
wing disc ML-DmD32
 
 20
haltere disc ML-DmD17-c3
 
 8
eye-antennal disc ML-DmD11
 
 8
antennal disc ML-DmD20-c5
 
 15
mixed discs ML-DmD4-c1
 
 15
CNS ML-DmBG1-c1
 
 10
CNS ML-DmBG2-c2
 
 100
tumorous blood cells mbn2
 
 88
ovary fGS/OSS
 
 36
ovary OSC
 
 19
ovary OSS
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 28
Schneider line 2 Sg4
 
 43
embryonic 1182-4H
 
 34
embryonic GM2
 
 89
embryonic Kc167
 
 89
embryonic S1
 
 21
embryonic S3
 
 29
leg disc CME L1
 
 48
wing disc CME-W2
 
 75
wing disc ML-DmD8
 
 18
wing disc ML-DmD9
 
 19
wing disc ML-DmD16-c3
 
 10
wing disc ML-DmD21
 
 5
wing disc ML-DmD32
 
 20
haltere disc ML-DmD17-c3
 
 8
eye-antennal disc ML-DmD11
 
 8
antennal disc ML-DmD20-c5
 
 15
mixed discs ML-DmD4-c1
 
 15
CNS ML-DmBG1-c1
 
 10
CNS ML-DmBG2-c2
 
 100
tumorous blood cells mbn2
 
 88
ovary fGS/OSS
 
 36
ovary OSC
 
 19
ovary OSS
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 2
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 7
Cadmium 50 mM 6 hrs, larvae L3
 
 4
Cadmium 50 mM 12 hrs, larvae L3
 
 3
Cadmium 50 mM 48 hrs, 4-day adult
 
 11
Cadmium 100 mM 48 hrs, 4-day adult
 
 23
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 5
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 4
Ethanol 2.5% 3 hrs, larvae L3
 
 12
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 6
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 4
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 2
Paraquat 5 mM 48 hrs, 4-day adult
 
 5
Paraquat 10 mM 48 hrs, 4-day adult
 
 18
Rotenone 2 μg 12 hrs, larvae L3
 
 5
Rotenone 8 μg 12 hrs, larvae L3
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 2
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 7
Cadmium 50 mM 6 hrs, larvae L3
 
 4
Cadmium 50 mM 12 hrs, larvae L3
 
 3
Cadmium 50 mM 48 hrs, 4-day adult
 
 11
Cadmium 100 mM 48 hrs, 4-day adult
 
 23
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 5
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 4
Ethanol 2.5% 3 hrs, larvae L3
 
 12
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 6
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 4
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 2
Paraquat 5 mM 48 hrs, 4-day adult
 
 5
Paraquat 10 mM 48 hrs, 4-day adult
 
 18
Rotenone 2 μg 12 hrs, larvae L3
 
 5
Rotenone 8 μg 12 hrs, larvae L3
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 2
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 7
Cadmium 50 mM 6 hrs, larvae L3
 
 4
Cadmium 50 mM 12 hrs, larvae L3
 
 3
Cadmium 50 mM 48 hrs, 4-day adult
 
 11
Cadmium 100 mM 48 hrs, 4-day adult
 
 23
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 5
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 4
Ethanol 2.5% 3 hrs, larvae L3
 
 12
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 6
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 4
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 2
Paraquat 5 mM 48 hrs, 4-day adult
 
 5
Paraquat 10 mM 48 hrs, 4-day adult
 
 18
Rotenone 2 μg 12 hrs, larvae L3
 
 5
Rotenone 8 μg 12 hrs, larvae L3
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 2
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 7
Cadmium 50 mM 6 hrs, larvae L3
 
 4
Cadmium 50 mM 12 hrs, larvae L3
 
 3
Cadmium 50 mM 48 hrs, 4-day adult
 
 11
Cadmium 100 mM 48 hrs, 4-day adult
 
 23
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 5
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 4
Ethanol 2.5% 3 hrs, larvae L3
 
 12
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 6
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 4
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 2
Paraquat 5 mM 48 hrs, 4-day adult
 
 5
Paraquat 10 mM 48 hrs, 4-day adult
 
 18
Rotenone 2 μg 12 hrs, larvae L3
 
 5
Rotenone 8 μg 12 hrs, larvae L3
 
 5
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 2
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 7
Cadmium 50 mM 6 hrs, larvae L3
 
 4
Cadmium 50 mM 12 hrs, larvae L3
 
 3
Cadmium 50 mM 48 hrs, 4-day adult
 
 11
Cadmium 100 mM 48 hrs, 4-day adult
 
 23
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 5
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 4
Ethanol 2.5% 3 hrs, larvae L3
 
 12
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 6
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 4
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 2
Paraquat 5 mM 48 hrs, 4-day adult
 
 5
Paraquat 10 mM 48 hrs, 4-day adult
 
 18
Rotenone 2 μg 12 hrs, larvae L3
 
 5
Rotenone 8 μg 12 hrs, larvae L3
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 2
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 7
Cadmium 50 mM 6 hrs, larvae L3
 
 4
Cadmium 50 mM 12 hrs, larvae L3
 
 3
Cadmium 50 mM 48 hrs, 4-day adult
 
 11
Cadmium 100 mM 48 hrs, 4-day adult
 
 23
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 5
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 4
Ethanol 2.5% 3 hrs, larvae L3
 
 12
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 6
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 4
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 2
Paraquat 5 mM 48 hrs, 4-day adult
 
 5
Paraquat 10 mM 48 hrs, 4-day adult
 
 18
Rotenone 2 μg 12 hrs, larvae L3
 
 5
Rotenone 8 μg 12 hrs, larvae L3
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 2
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 7
Cadmium 50 mM 6 hrs, larvae L3
 
 4
Cadmium 50 mM 12 hrs, larvae L3
 
 3
Cadmium 50 mM 48 hrs, 4-day adult
 
 11
Cadmium 100 mM 48 hrs, 4-day adult
 
 23
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 5
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 4
Ethanol 2.5% 3 hrs, larvae L3
 
 12
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 6
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 4
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 2
Paraquat 5 mM 48 hrs, 4-day adult
 
 5
Paraquat 10 mM 48 hrs, 4-day adult
 
 18
Rotenone 2 μg 12 hrs, larvae L3
 
 5
Rotenone 8 μg 12 hrs, larvae L3
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 2
cold shock, 4-day adult
 
 1
heat shock, 4-day adult
 
 7
Cadmium 50 mM 6 hrs, larvae L3
 
 4
Cadmium 50 mM 12 hrs, larvae L3
 
 3
Cadmium 50 mM 48 hrs, 4-day adult
 
 11
Cadmium 100 mM 48 hrs, 4-day adult
 
 23
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 5
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 4
Ethanol 2.5% 3 hrs, larvae L3
 
 12
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 6
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 4
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 2
Paraquat 5 mM 48 hrs, 4-day adult
 
 5
Paraquat 10 mM 48 hrs, 4-day adult
 
 18
Rotenone 2 μg 12 hrs, larvae L3
 
 5
Rotenone 8 μg 12 hrs, larvae L3
 
 5
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
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hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
anterior fascicle & synapse | supernumerary, with Scer\GAL4elav-C155
hide Classical Alleles ( 19 )
For All Classical Alleles Show

Allele of Mrp4ClassMutagenStocksKnown lesion
Mrp45-HA-1117
1 --
Mrp4c003261 --
Mrp4CB-5620-3
1 --
Mrp4d053581 --
Mrp4EY02678b1 --
Mrp4MB09770
1 --
Mrp4NP1346
1 --
Mrp4NP6649
1 --
Mrp4UY47311 Yes
Mrp4DG29407
0 --
Mrp4EP3177hypomorphic allele - molecular evidence
0 Yes
Mrp4EP32210 Yes
Mrp4EP3328hypomorphic allele - molecular evidence
0 Yes
Mrp4EP3655
0 Yes
Mrp4EP4300 Yes
Mrp4ex11wild-type allele0 Yes
Mrp4ex31wild-type allele0 Yes
Mrp4ex621hypomorphic allele - molecular evidence0 --
Mrp4ex661hypomorphic allele - molecular evidence0 --
hide Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show

Allele of Mrp4ClassMutagenStocksKnown lesion
Mrp4GD29201 Yes
Mrp4KK1039401 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 9 unique terms )
hide Terms Based on Experimental Evidence ( 3 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component ( 0 terms)
hide Terms Based on Predictions or Assertions ( 6 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with UniProtKB:Q9R1X5
Biological Process
CV term
References
inferred from sequence or structural similarity with UniProtKB:Q9R1X5
Cellular Component
CV term
References
inferred from sequence or structural similarity with UniProtKB:Q9R1X5
hide Sequence Ontology: Class of Gene
 
hide Interactions & Pathways
hide Summary of Physical Interactions
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Mrp4 allele
Gene
References
hide External Data
Linkouts
DroID - A comprehensive database of gene and protein interactions.
hide Orthologs
hide OrthoDB Orthologs (173) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
hideOrthologs in Drosophila Species (EOG634WRB)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila sechellia
 
 
 
Drosophila erecta
 
Y
 
Drosophila yakuba
 
Y
 
Drosophila ananassae
 
Y
 
Drosophila pseudoobscura pseudoobscura
 
Y
 
Drosophila persimilis
 
Y
 
Drosophila willistoni
 
 
 
Drosophila virilis
 
 
 
Drosophila virilis
 
 
 
Drosophila mojavensis
 
 
 
Drosophila mojavensis
 
Y
 
Drosophila mojavensis
 
 
 
Drosophila grimshawi
 
 
 
Drosophila grimshawi
 
 
 
Drosophila grimshawi
 
 
 
hideOrthologs in non-Drosophila Dipterans (EOG6V177S)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Aedes aegypti
Yellow fever mosquito 
Y
Aedes aegypti
Yellow fever mosquito 
Y
Anopheles gambiae
Malaria mosquito 
Y
Culex quinquefasciatus
Southern house mosquito 
Y
Culex quinquefasciatus
Southern house mosquito 
Y
hideOrthologs in non-Dipteran Insects (EOG66WX48)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\GB43189
Y
Apis mellifera
Western honey bee 
Amel\GB48573
Y
Apis mellifera
Western honey bee 
Amel\GB50195
Y
Apis mellifera
Western honey bee 
Amel\LOC551061
Y
Apis mellifera
Western honey bee 
Amel\GB45278
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005769
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG014001
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG013995
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005771
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005619
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005939
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG001436
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005743
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005949
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005940
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG021419
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG007473
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG022099
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG008391
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG001435
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005946
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG001437
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005944
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG015638
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH20970
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH25144
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH25142
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH25143
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH25138
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH18076
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH25145
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH25137
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP20247
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP25775
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP19448
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP10888
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP10899
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP10892
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP10901
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP10903
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP10882
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP10902
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO23510
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO13349
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO23511
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO14835
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO23512
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL17005
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL18589
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL23459
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL23460
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL16445
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL23461
Y
Linepithema humile
Argentine ant 
Lhum\LH25761
Y
Linepithema humile
Argentine ant 
Lhum\LH22562
Y
Linepithema humile
Argentine ant 
Lhum\LH22565
Y
Linepithema humile
Argentine ant 
Lhum\LH12079
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18191
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18190
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18184
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB11368
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB12060
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18192
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV16600
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV11461
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV15752
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV14284
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV14289
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Pediculus humanus
Human body louse 
Y
Pediculus humanus
Human body louse 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
hideOrthologs in non-Insect Arthropods (EOG6DBRVF)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Ixodes scapularis
Deer tick 
Y
hideOrthologs in non-Arthropod Metazoa (EOG65BD76)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Caenorhabditis elegans
Nematode 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Strongylocentrotus purpuratus
Purple sea urchin 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Danio rerio
Zebrafish 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Xenopus tropicalis
Western clawed frog 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Gallus gallus
Domestic chicken 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Mus musculus
House mouse 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Rattus norvegicus
Norway rat 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
Homo sapiens
Human 
Y
hide Human Orthologs (4)
Gene
OMIM
HGNC
hideAAA Orthologs (6) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila erecta
Drosophila yakuba
Drosophila ananassae
Drosophila pseudoobscura pseudoobscura
Drosophila persimilis
Drosophila mojavensis
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 11 )
Bloomington
Harvard
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 25 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: Mrp4 CG14709
Source for database merge of
Source for merge of: BEST:CK01227 CG14709
Source for merge of: CG14709 BEST:CK02472
Source for merge of: Mrp4 EP3221
Additional comments
hide Other Comments
Identification: cDNA screen for secreted and transmembrane proteins expressed during embryogenesis.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
DroID - A comprehensive database of gene and protein interactions.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Synonyms & Secondary IDs ( 10 )
Reported As
Symbol Synonym
BEST:CK02472
 
Dme_CG14709
EP3221
 
Mrp4
 
Name Synonym
EP3221
 
Multidrug resistance protein 4 ortholog
 
Secondary FlyBase IDs
  • FBgn0025701
  • FBgn0037914
  • FBgn0044463
  • FBgn0046311
hide References ( 42 )
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