Please see the JBrowse view of Dmel\smash for information on other features
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Gene model includes transcripts encoding non-overlapping portions of the full CDS
Gene model reviewed during 5.40
Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.
Annotated transcripts do not represent all supported alternative splices within 5' UTR.
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.47
Gene model includes transcripts encoding non-overlapping portions of the full CDS.
Alternative translation stop created by use of multiphasic reading frames within coding region.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\smash using the Feature Mapper tool.
Comment: cyclical, peak ZT17-20
Comment: anlage in statu nascendi
Comment: anlage in statu nascendi
Comment: reported as posterior spiracle specific anlage
Expressed cyclically in the adult fat body.
smash protein is detectable from embryonic stage 5 on in all ectodermally-derived epithelia, including epidermis, foregut, hindgut, Malpighian tubules, salivary glands, amnioserosa, and the tracheal tree. It is also observed in somatic, pharyngeal, and visceral muscles. No expression is observed in neuroblasts and their descendents.
GBrowse - Visual display of RNA-Seq signals
View Dmel\smash in GBrowse 23-47.1
3-47.1
3-44.1
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
polyclonal
Source for identity of: smash CG43427
Source for merge of: CG1054 CG14653
Source for merge of: CG31534 anon-WO0140519.95
Source for merge of: CG18253 CG1055
Source for merge of: CG31531 CG31534
shk may correspond to CG43427: the P{PZ}shk1 insertion maps within the transcription unit.
Annotations CG31531 and CG31534 merged as CG43427 in release 5.40 of the genome annotation.
Merge supported by RNA-seq junction and RNA-seq expression data.
Annotations CG1054 and CG14653 merged as CG31531 in release 3 of the genome annotation.
Annotations CG1055, CG18253 merged as CG31534 in release 3 of the genome annotation.
Source for merge of CG31534 anon-WO0140519.95 was sequence comparison ( date:051113 ).
Source for merge of CG18253 CG1055 was a shared cDNA ( date:010720 ).
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
Named 'smallish' because overexpression results in almost complete lethality with very rare escaper flies that are strongly reduced in size.