A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\para

General Information
SymbolDmel\paraSpeciesD. melanogaster
NameparalyticAnnotation symbolCG9907
Feature typeprotein_coding_geneFlyBase IDFBgn0264255
Gene Model StatusCurrent Stock availability 15 publicly available
Also Known Asbss, sbl, olfD, DmNav1, DmNav
Genomic Location
Chromosome (arm)XRecombination map1-55
Cytogenetic map14D1-16A2Sequence locationX:16,349,325..16,421,448 [-]

Genomic Maps

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Automatically generated summary

See sections below for more information
The gene paralytic is referred to in FlyBase by the symbol Dmel\para (CG9907, FBgn0264255). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: voltage-gated sodium channel activity. There is experimental evidence that it is involved in the biological process: male courtship behavior, veined wing generated song production; response to hypoxia; response to mechanical stimulus; cellular process; response to pyrethroid; sodium ion transport; mechanosensory behavior; response to DDT. 98 alleles are reported. The phenotypes of these alleles are annotated with: giant fiber neuron; central nervous system; neuromuscular junction; abdominal 1 dorsal longitudinal muscle; synapse; adult brain. It has 59 annotated transcripts and 59 annotated polypeptides. Protein features are: Calcium-binding EF-hand; Domain of unknown function DUF3451; Ion transport domain; Sodium ion transport-associated; Voltage gated sodium channel, alpha subunit. Gene sequence location is X:16352900..16421447.

User Contributed Data
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
para: paralytic (J.C. Hall)
Exposure to 29-30 causes rapid paralysis that is quickly reversed on shift to 22-25. Larvae are paralyzed, too, at somewhat higher temperatures. Flies of some para strains seem sluggish at lower temperatures. When these mutants are still paralyzed (i.e. at high temperatures), they appear to retain many of their "vital functions," their heart still beats (Grigliatti, Suzuki and Williamson, 1972), and they quickly regain normal behavior when shifted to 22 after several hours at 29 (Suzuki et al., 1971); in fact, after a less prolonged exposure (30 min) to high temperature, the still-heated mutant flies regain weak mobility and are even able to right themselves and walk (Suzuki et al, 1971). parats/+ adults become paralyzed at 40 within one min [10 min required to paralyze wild-type (Hall, 1973, DIS 50: 103-04)]. parats1 larvae stop "tracking" at high temperature (Wu, Ganetzky, Jan, Jan and Benzer, 1978, Proc. Nat. Acad. Sci. USA 75: 4047-51). parats1 is nearly unconditionally lethal when uncovered by a deletion or other para-locus aberration, whereas other alleles lead to reduced viability (unconditional) when heterozygous with chromosomal aberrations at the locus (Ganetzky, 1984). Action potentials in larval nerves are reversibly heat-sensitive (Wu and Ganetzky, 1980), and the same can be inferred for at least some adult neurons (indicated by brain stimulation and recording of responses in thoracic muscles [Siddiqi and Benzer, 1976, Proc. Nat. Acad. Sci. USA 73: 3253-57; Benshalom and Dagan, 1981, J. Comp. Physiol. 144: 409-17]). Other "excitable phenomena," such as the electroretinogram responses and synaptic transmission, appear to be normal in parats adults at high temperature (Suzuki et al., 1971; Siddiqi and Benzer, 1976); also parats1 does not block action potentials in the cervical giant fiber at high temperature (Nelson and Baird, 1985, Neurosci. Abstr. 11: 313) in contrast to results of recording from larval motor neurons (Wu and Ganetzky, 1980); other studies of the giant fiber pathway (involving adult mosaics bilaterally split, externally, for parats1 and para+) indicate that at least certain elements of the pathway (if not the giant fiber itself) fail to fire action potentials at elevated temperature (Benshalom and Dagan, 1981), and recordings from mosaics of this type also suggest "functional coupling" between left and homologous right sides of this giant fiber pathway (Benshalom and Dagan, 1985, J. Comp. Physiol. 156: 13-23). parats1 causes first larval instar death when in combination with napts (Wu and Ganetzky, 1980; Ganetzky, 1984); similar lethality occurs when para+ dosage is decreased in a napts background (Ganetzky, 1984). Other para alleles, in combination with napts, lead to reduced viability, with parats115 having the strongest effect, followed by paraST76 and paraST109 (Ganetzky, 1984). In combination with the tipE mutation, para mutations again cause decreased viability, but the allele-specific interactions are different from those of the series just noted [i.e. with respect to napts (Ganetzky, 1986)]. Surviving para; tipE double mutants are weak, and show accentuated heat-sensitivity (in regard to mobility and nerve conduction); para alleles are dominant for behavioral defects in a homozygous tipE background (Ganetzky, 1985). In adults doubly mutant for parats1 and napts, sensory cells (developing from imaginal discs in mosaics) appear to have no nerve conduction (Burg and Wu, 1984, Neurosci. Abstr. 10: 513). In mosaics involving para mutations only one allele (paraST109) causes all legs to be either paralyzed or normal in different individual gynandromorphs (Siddiqi and Benzer), in contrast to independent paralysis of legs in mosaics constructed with respect to parats1 [Grigliatti et al., 1972; Siddiqi and Benzer, 1978, Genetic Mosaics and Cell Differentiation (Gehring, ed.). Springer-Verlag, Berlin, pp: 259-305]. These results (and others, Benshalom and Dagan, 1985, for example), reveal poor correlation of the externally mutant genotype (in mosaics) and behavioral or physiological malfunctions [consistent with internal (no doubt neural) "foci" for para's action]. In other studies, parats1 mosaics with mutant heads (scored externally) usually are immobile at high temperature, but maintain normal posture (Suzuki et al., 1971; Grigliatti et al., 1972). Exposure of parats1 males to high temperature causes arrest of the oscillator underlying rhythmic component of courtship song (Kyriacou and Hall, 1985). At permissive temperatures, parats1 neurons (unlike those influenced by napts) seem normal, except that there is slightly increased resistance of cultured parats1 larval neurons to killing effects of veratridine, shift to high temperature causing that resistance to increase (Suzuki and Wu, 1984, J. Neurogenet. 1: 225-38). Other pharmacological studies (tetrodotoxin sensitivity of action potentials or binding assays involving that toxin) have revealed no para-induced abnormalities (Ganetzky and Wu, 1980; Kauvar, 1982, Molec. Gen. Genet. 187: 172-73). It was reported (based on injection of parats1 adults with picrotoxin and the ensuing inhibition of paralysis at high temperatures) that the mutation is involved in a generalized augmentation of inhibition mediated by gamma-amino-butyric acid [Williamson, Kaplan and Dagan, 1974, Nature (London) 252: 224-26] but further physiological data (involving administration of picrotoxin) dispute this hypothesis. parats1 is reported to cause an anomalous inflection point in Arrhenius plots, with respect to activity of the mitochondrial enzyme succinate cytochrome c reductase, at a temperature close to that which induces paralysis (Søndergaard, 1976, Hereditas 82: 51-56).
sbl: smellblind (J.C. Hall)
Responds poorly, or apparently not at all, to a variety of volatile compounds; hence, may be generally olfaction defective, as opposed to responding poorly to only certain classes of synthetic or natural compounds; sbl1 was isolated with respect to abnormal shock-avoidance learning tests of adults, which involve odor cues (Aceves-Pina and Quinn, 1979); sbl2 was isolated with regard to odor response tests per se (Rodrigues and Siddiqi, 1978); sbl1 and sbl2 defective in larval olfaction (Aceves-Pina and Quinn, 1979; Monte et al., 1989) and fail to complement in this regard (Lilly and Carlson, 1990); the latter report showed sbl2 to respond poorly to 3 separate odorants; both of these mutants also behave subnormally in tests of larval contact chemosensory responses, but each is normal in visually mediated larval behavior (Lilly and Carlson, 1990); sbl1 and sbl2 are temperature-sensitive near-lethals in 29 rearing tests, and they fail to complement in this regard (Lilly and Carlson, 1990); a post eclosion shift from 25 to the higher temperature does not appear to affect viability, but adults under these conditions have not been tested behaviorally--recall that sbl2 flies are defective in odor responses (Rodrigues and Siddiqi, 1978; Gailey et al., 1986), and sbl1 adults are as well (Aceves-Pina and Quinn, 1979; Tompkins et al., 1980; J. Carlson, unpublished--the latter determination used testing procedures as reported by Woodward, Huang, Sun, Helfand, and Carlson, 1989, Genetics 123: 315-326). Other alleles are unconditionally lethal. In courtship experiments, sbl1 (Tompkins et al., 1980) or sbl2 (Gailey et al., 1986) males make little or no responses to pheromonal materials extracted from adult females; the former mutant, as a male, also performs subnormally in terms of quantitative measurements of overall courtship interactions with females (Tompkins et al., 1980) as well as by specification of individual elements of such sexual behavior (Markow, 1987). seemingly as a consequence, sbl1 males exhibit mediocre mating success (Tompkins et al., 1980; Markow, 1987); the latter is observed when the mutant males are with females only (Tompkins et al., 1982) or are also in competition with wild-type males (Markow, 1987). sbl2 males are rather wild-type-like, with respect to short-term monitoring of their behavior in presence of females and also in terms of mating success (Gailey et al., 1986); a sbl2 male, however, makes almost no odor-mediated responses to a courtship object in his presence, as stimulated by a female placed nearby, whereas wild-type males are rather vigorously stimulated to court under these circumstances (Gailey et al., 1986). Females homozygous for sbl1 (Tompkins et al., 1982; Markow, 1987) or sbl2 (Gailey et al., 1986) exhibit relatively poor receptivity to male courtship/mating activities; this could be explained by the fact that they tend not to slow their movements in response to the courting male, whereas wild-type females do (Tompkins et al., 1982; Gailey et al., 1986). Courtship-experience-dependent after-effects, which appear to be in part mediated olfactorily, are subnormal or absent in tests of sbl1 males with fertilized females (Tompkins et al., 1983). In experiments involving counts of post-eclosion mushroom-body fiber (axon) numbers in young imagoes, deantennated vs. intact sbl1 flies were found to exhibit same degree of reductions in fiber numbers (Technau, 1984)--suggesting that deantennation, which leads to such decreases in wild-type adults, effects these anatomical changes because of sensory deprivation, instead of surgery-induced injury per se.
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Description
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FB2013_03
Alleles
Transcripts
Polypeptides
FB2013_02
Controlled Vocabulary Terms
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
14D1-16A2  
Limits computationally determined from genome sequence between P{EP}EP1547EP1547 and P{EP}CG4928EP1341; Left limit from non-inclusion within Dp(1;4)r+l (citation unavailable)  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
14C-14C  
(determined by in situ hybridisation)  
14D1-14D1  
14C-14C  
(determined by in situ hybridisation)  
14C-14D  
(determined by in situ hybridisation)  
14C6-14D1  
(determined by in situ hybridisation)  
14A-15A  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
1-55
 
1-55.2 +/- 0.2
Left of (cM)
Right of (cM)
Notes
Mapping based on lethal phenotype.
Mapping based on 107 recombinants.
Mapped adjacent to eas. Mapped adjacent to nonA.
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Please see the GBrowse view of Dmel\para for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0074279 FBtr0074280 FBtr0074281 FBtr0074299 FBtr0303658 FBtr0303657 FBtr0290121 FBtr0303663 FBtr0303698 FBtr0303675 FBtr0303666 FBtr0303655 FBtr0303678 FBtr0303689 FBtr0303679 FBtr0303661 FBtr0303703 FBtr0303707 FBtr0111022 FBtr0303685 FBtr0303673 FBtr0303690 FBtr0303656 FBtr0303674 FBtr0303671 FBtr0303695 FBtr0303659 FBtr0303701 FBtr0303700 FBtr0303684 FBtr0303677 FBtr0303702 FBtr0303704 FBtr0303693 FBtr0303680 FBtr0303692 FBtr0303691 FBtr0303668 FBtr0303683 FBtr0303697 FBtr0074298 FBtr0111023 FBtr0303672 FBtr0303667 FBtr0303694 FBtr0303706 FBtr0331170 FBtr0303660 FBtr0303676 FBtr0303688 FBtr0303670 FBtr0303696 FBtr0303669 FBtr0303699 FBtr0303705 FBtr0303665 FBtr0303681 FBtr0303662 FBtr0303682 FBtr0303664 FBtr0303687 FBtr0303686 FBtr0342746 FBpp0292693 FBpp0292709 FBpp0292695 FBpp0292719 FBpp0292700 FBpp0292679 FBpp0292698 FBpp0292682 FBpp0292713 FBpp0292706 FBpp0292715 FBpp0110321 FBpp0292724 FBpp0292687 FBpp0292681 FBpp0292685 FBpp0292676 FBpp0074073 FBpp0292674 FBpp0292705 FBpp0292712 FBpp0309614 FBpp0292694 FBpp0292707 FBpp0292699 FBpp0292692 FBpp0292677 FBpp0303597 FBpp0292680 FBpp0288560 FBpp0292704 FBpp0292689 FBpp0292672 FBpp0292720 FBpp0292690 FBpp0292686 FBpp0292723 FBpp0292678 FBpp0292710 FBpp0292721 FBpp0292673 FBpp0292688 FBpp0292684 FBpp0292708 FBpp0292703 FBpp0292696 FBpp0292714 FBpp0292722 FBpp0292718 FBpp0292716 FBpp0110322 FBpp0292702 FBpp0292691 FBpp0292683 FBpp0292675 FBpp0292701 FBpp0292711 FBpp0292697 FBpp0292717 FBpp0074074 FBti0021162 FBti0053458 FBti0051577 FBti0102024 FBti0050898 FBti0023363 FBti0068535 FBti0055443 FBti0070839
Comments on Gene Model
Gene model reviewed during 5.44
Stop-codon suppression (UGA) postulated; FBrf0216884.
gene_with_stop_codon_read_through ; SO:0000697
Gene model reviewed during 5.51
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0074298
  6849
  2131
FBtr0303677
  6708
  2084
FBtr0303678
  6714
  2086
FBtr0303679
  11444
  2084
FBtr0303680
  6714
  2086
FBtr0303681
  6780
  2108
FBtr0303682
  6786
  2110
FBtr0303683
  6723
  2089
FBtr0303684
  6777
  2107
FBtr0303685
  6714
  2086
FBtr0303686
  6852
  2132
FBtr0303687
  11483
  2097
FBtr0303688
  6789
  2111
FBtr0303689
  6705
  2083
FBtr0303690
  6885
  2143
FBtr0303691
  6795
  2113
FBtr0303692
  6747
  2097
FBtr0303693
  6723
  2089
FBtr0303694
  6607
  240
FBtr0303695
  6657
  2067
FBtr0303696
  6624
  2056
FBtr0303697
  5965
  1125
FBtr0303698
  5941
  1117
FBtr0303699
  6642
  2062
FBtr0303700
  6753
  2099
FBtr0303701
  6852
  2132
FBtr0303702
  6789
  2111
FBtr0111022
  6849
  2131
FBtr0303703
  6852
  2132
FBtr0303704
  6654
  2066
FBtr0303705
  5712
  872
FBtr0303706
  6624
  2056
FBtr0303707
  6665
  917
FBtr0331170
  6849
  2145
FBtr0342746
 
  15161
  2131
FBtr0111023
  6849
  2131
FBtr0290121
  6798
  2114
FBtr0303655
  6780
  2108
FBtr0303656
  6780
  2108
FBtr0303657
  6717
  2087
FBtr0303658
  6747
  2097
FBtr0303659
  6693
  2079
FBtr0303660
  6756
  2100
FBtr0303661
  6684
  2076
FBtr0303662
  6717
  2087
FBtr0303663
  6756
  2100
FBtr0303664
  6756
  2100
FBtr0303665
  6732
  2092
FBtr0303666
  6819
  2121
FBtr0303667
  6684
  2076
FBtr0303668
  6693
  2079
FBtr0303669
  6756
  2100
FBtr0303670
  6786
  2110
FBtr0303671
  6810
  2118
FBtr0303672
  6747
  2097
FBtr0303673
  6762
  2102
FBtr0303674
  6831
  2125
FBtr0303675
  6870
  2138
FBtr0303676
  6723
  2089
Additional Transcript Data & Comments
Reported size (kB)
3.0 (northern blot)
1.9 (longest cDNA)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0074073  
239.4  
2131  
4.77  
FBpp0292694  
234.2  
2084  
4.70  
FBpp0292695  
234.2  
2086  
4.71  
FBpp0292696  
234.2  
2084  
4.70  
FBpp0292697  
234.2  
2086  
4.65  
FBpp0292698  
236.9  
2108  
4.73  
FBpp0292699  
237.0  
2110  
4.70  
FBpp0292700  
234.7  
2089  
4.65  
FBpp0292701  
236.4  
2107  
4.73  
FBpp0292702  
234.1  
2086  
4.68  
FBpp0292703  
239.3  
2132  
4.76  
FBpp0292704  
235.4  
2097  
4.71  
FBpp0292705  
237.0  
2111  
4.70  
FBpp0292706  
233.8  
2083  
4.68  
FBpp0292707  
240.7  
2143  
4.81  
FBpp0292708  
237.4  
2113  
4.75  
FBpp0292709  
235.6  
2097  
4.69  
FBpp0292710  
234.5  
2089  
4.72  
FBpp0292711  
27.5  
240  
4.67  
FBpp0292712  
232.1  
2067  
4.70  
FBpp0292713  
230.8  
2056  
4.66  
FBpp0292714  
126.9  
1125  
5.26  
FBpp0292715  
125.9  
1117  
5.26  
FBpp0292716  
231.5  
2062  
4.62  
FBpp0292717  
235.4  
2099  
4.73  
FBpp0292718  
239.4  
2132  
4.73  
FBpp0292719  
237.1  
2111  
4.68  
FBpp0110321  
239.5  
2131  
4.74  
FBpp0292720  
239.2  
2132  
4.75  
FBpp0292721  
231.9  
2066  
4.65  
FBpp0292722  
97.9  
872  
4.56  
FBpp0292723  
230.9  
2056  
4.63  
FBpp0292724  
102.8  
917  
4.80  
FBpp0303597  
241.0  
2145  
4.79  
FBpp0309614  
239.4  
2131  
4.77  
 
 
FBpp0110322  
239.3  
2131  
4.76  
FBpp0288560  
237.4  
2114  
4.70  
FBpp0292672  
236.8  
2108  
4.76  
FBpp0292673  
236.7  
2108  
4.75  
FBpp0292674  
234.5  
2087  
4.70  
FBpp0292675  
235.4  
2097  
4.71  
FBpp0292676  
233.6  
2079  
4.70  
FBpp0292677  
235.8  
2100  
4.75  
FBpp0292678  
233.2  
2076  
4.69  
FBpp0292679  
234.5  
2087  
4.69  
FBpp0292680  
235.8  
2100  
4.76  
FBpp0292681  
236.1  
2100  
4.69  
FBpp0292682  
235.2  
2092  
4.69  
FBpp0292683  
238.4  
2121  
4.75  
FBpp0292684  
233.3  
2076  
4.70  
FBpp0292685  
233.5  
2079  
4.69  
FBpp0292686  
236.1  
2100  
4.68  
FBpp0292687  
236.8  
2110  
4.78  
FBpp0292688  
237.8  
2118  
4.78  
FBpp0292689  
235.5  
2097  
4.72  
FBpp0292690  
236.1  
2102  
4.72  
FBpp0292691  
238.7  
2125  
4.78  
FBpp0292692  
240.3  
2138  
4.77  
FBpp0292693  
234.8  
2089  
4.68  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
In vitro assays demonstrate that Dsp1 can switch several proteins of the Rel family, including Dl and NF-ΚB, from transcriptional activators to repressors. This switch requires the presence of a negative regulatory element (NRE) sequence adjacent to the Dl binding site.
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
point mutation
na_change=G16367719C
pr_change=G1571R | para-PA; G1571R | para-PB; G1571R | para-PC; G1554R | para-PD; G1548R | para-PE; G1548R | para-PF; G1527R | para-PG; G1537R | para-PH; G1519R | para-PI; G1540R | para-PJ; G1516R | para-PK; G1527R | para-PL; G1540R | para-PM; G1540R | para-PN; G1532R | para-PO; G1561R | para-PP; G1516R | para-PQ; G1519R | para-PR; G1540R | para-PS; G1550R | para-PT; G1558R | para-PU; G1537R | para-PV; G1542R | para-PW; G1565R | para-PX; G1578R | para-PY; G1529R | para-PZ; G1524R | para-PAA; G1526R | para-PAB; G1524R | para-PAC; G1526R | para-PAD; G1548R | para-PAE; G1550R | para-PAF; G1529R | para-PAG; G1547R | para-PAH; G1526R | para-PAI; G1572R | para-PAJ; G1537R | para-PAK; G1551R | para-PAL; G1523R | para-PAM; G1583R | para-PAN; G1553R | para-PAO; G1537R | para-PAP; G1529R | para-PAQ; R242T | para-PAR; G1507R | para-PAS; G1496R | para-PAT; R1127T | para-PAU; R1119T | para-PAV; G1502R | para-PAW; G1539R | para-PAX; G1572R | para-PAY; G1551R | para-PAZ; G1572R | para-PBA; G1506R | para-PBB; R874T | para-PBC; G1496R | para-PBD; R919T | para-PBE
reported_pr_change=G1571R
comment=One of two amino acid substitutions in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
point mutation
na_change=A16367795G
pr_change=I1545M | para-PA; I1545M | para-PB; I1545M | para-PC; I1528M | para-PD; I1522M | para-PE; I1522M | para-PF; I1501M | para-PG; I1511M | para-PH; I1493M | para-PI; I1514M | para-PJ; I1490M | para-PK; I1501M | para-PL; I1514M | para-PM; I1514M | para-PN; I1506M | para-PO; I1535M | para-PP; I1490M | para-PQ; I1493M | para-PR; I1514M | para-PS; I1524M | para-PT; I1532M | para-PU; I1511M | para-PV; I1516M | para-PW; I1539M | para-PX; I1552M | para-PY; I1503M | para-PZ; I1498M | para-PAA; I1500M | para-PAB; I1498M | para-PAC; I1500M | para-PAD; I1522M | para-PAE; I1524M | para-PAF; I1503M | para-PAG; I1521M | para-PAH; I1500M | para-PAI; I1546M | para-PAJ; I1511M | para-PAK; I1525M | para-PAL; I1497M | para-PAM; I1557M | para-PAN; I1527M | para-PAO; I1511M | para-PAP; I1503M | para-PAQ; Y242C | para-PAR; I1481M | para-PAS; I1470M | para-PAT; Y1127C | para-PAU; Y1119C | para-PAV; I1476M | para-PAW; I1513M | para-PAX; I1546M | para-PAY; I1525M | para-PAZ; I1546M | para-PBA; I1480M | para-PBB; Y874C | para-PBC; I1470M | para-PBD; Y919C | para-PBE
reported_pr_change=I1545M
comment=One of two amino acid substitutions in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
point mutation
na_change=A16367795G
pr_change=I1545M | para-PA; I1545M | para-PB; I1545M | para-PC; I1528M | para-PD; I1522M | para-PE; I1522M | para-PF; I1501M | para-PG; I1511M | para-PH; I1493M | para-PI; I1514M | para-PJ; I1490M | para-PK; I1501M | para-PL; I1514M | para-PM; I1514M | para-PN; I1506M | para-PO; I1535M | para-PP; I1490M | para-PQ; I1493M | para-PR; I1514M | para-PS; I1524M | para-PT; I1532M | para-PU; I1511M | para-PV; I1516M | para-PW; I1539M | para-PX; I1552M | para-PY; I1503M | para-PZ; I1498M | para-PAA; I1500M | para-PAB; I1498M | para-PAC; I1500M | para-PAD; I1522M | para-PAE; I1524M | para-PAF; I1503M | para-PAG; I1521M | para-PAH; I1500M | para-PAI; I1546M | para-PAJ; I1511M | para-PAK; I1525M | para-PAL; I1497M | para-PAM; I1557M | para-PAN; I1527M | para-PAO; I1511M | para-PAP; I1503M | para-PAQ; Y242C | para-PAR; I1481M | para-PAS; I1470M | para-PAT; Y1127C | para-PAU; Y1119C | para-PAV; I1476M | para-PAW; I1513M | para-PAX; I1546M | para-PAY; I1525M | para-PAZ; I1546M | para-PBA; I1480M | para-PBB; Y874C | para-PBC; I1470M | para-PBD; Y919C | para-PBE
reported_pr_change=I1545M
comment=One of two amino acid substitutions in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
point mutation
na_change=G16367719C
pr_change=G1571R | para-PA; G1571R | para-PB; G1571R | para-PC; G1554R | para-PD; G1548R | para-PE; G1548R | para-PF; G1527R | para-PG; G1537R | para-PH; G1519R | para-PI; G1540R | para-PJ; G1516R | para-PK; G1527R | para-PL; G1540R | para-PM; G1540R | para-PN; G1532R | para-PO; G1561R | para-PP; G1516R | para-PQ; G1519R | para-PR; G1540R | para-PS; G1550R | para-PT; G1558R | para-PU; G1537R | para-PV; G1542R | para-PW; G1565R | para-PX; G1578R | para-PY; G1529R | para-PZ; G1524R | para-PAA; G1526R | para-PAB; G1524R | para-PAC; G1526R | para-PAD; G1548R | para-PAE; G1550R | para-PAF; G1529R | para-PAG; G1547R | para-PAH; G1526R | para-PAI; G1572R | para-PAJ; G1537R | para-PAK; G1551R | para-PAL; G1523R | para-PAM; G1583R | para-PAN; G1553R | para-PAO; G1537R | para-PAP; G1529R | para-PAQ; R242T | para-PAR; G1507R | para-PAS; G1496R | para-PAT; R1127T | para-PAU; R1119T | para-PAV; G1502R | para-PAW; G1539R | para-PAX; G1572R | para-PAY; G1551R | para-PAZ; G1572R | para-PBA; G1506R | para-PBB; R874T | para-PBC; G1496R | para-PBD; R919T | para-PBE
reported_pr_change=G1571R
comment=One of two amino acid substitutions in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
point mutation
na_change=G16367719C
pr_change=G1571R | para-PA; G1571R | para-PB; G1571R | para-PC; G1554R | para-PD; G1548R | para-PE; G1548R | para-PF; G1527R | para-PG; G1537R | para-PH; G1519R | para-PI; G1540R | para-PJ; G1516R | para-PK; G1527R | para-PL; G1540R | para-PM; G1540R | para-PN; G1532R | para-PO; G1561R | para-PP; G1516R | para-PQ; G1519R | para-PR; G1540R | para-PS; G1550R | para-PT; G1558R | para-PU; G1537R | para-PV; G1542R | para-PW; G1565R | para-PX; G1578R | para-PY; G1529R | para-PZ; G1524R | para-PAA; G1526R | para-PAB; G1524R | para-PAC; G1526R | para-PAD; G1548R | para-PAE; G1550R | para-PAF; G1529R | para-PAG; G1547R | para-PAH; G1526R | para-PAI; G1572R | para-PAJ; G1537R | para-PAK; G1551R | para-PAL; G1523R | para-PAM; G1583R | para-PAN; G1553R | para-PAO; G1537R | para-PAP; G1529R | para-PAQ; R242T | para-PAR; G1507R | para-PAS; G1496R | para-PAT; R1127T | para-PAU; R1119T | para-PAV; G1502R | para-PAW; G1539R | para-PAX; G1572R | para-PAY; G1551R | para-PAZ; G1572R | para-PBA; G1506R | para-PBB; R874T | para-PBC; G1496R | para-PBD; R919T | para-PBE
reported_pr_change=G1571R
comment=One of two amino acid substitutions in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
point mutation
na_change=A16367795G
pr_change=I1545M | para-PA; I1545M | para-PB; I1545M | para-PC; I1528M | para-PD; I1522M | para-PE; I1522M | para-PF; I1501M | para-PG; I1511M | para-PH; I1493M | para-PI; I1514M | para-PJ; I1490M | para-PK; I1501M | para-PL; I1514M | para-PM; I1514M | para-PN; I1506M | para-PO; I1535M | para-PP; I1490M | para-PQ; I1493M | para-PR; I1514M | para-PS; I1524M | para-PT; I1532M | para-PU; I1511M | para-PV; I1516M | para-PW; I1539M | para-PX; I1552M | para-PY; I1503M | para-PZ; I1498M | para-PAA; I1500M | para-PAB; I1498M | para-PAC; I1500M | para-PAD; I1522M | para-PAE; I1524M | para-PAF; I1503M | para-PAG; I1521M | para-PAH; I1500M | para-PAI; I1546M | para-PAJ; I1511M | para-PAK; I1525M | para-PAL; I1497M | para-PAM; I1557M | para-PAN; I1527M | para-PAO; I1511M | para-PAP; I1503M | para-PAQ; Y242C | para-PAR; I1481M | para-PAS; I1470M | para-PAT; Y1127C | para-PAU; Y1119C | para-PAV; I1476M | para-PAW; I1513M | para-PAX; I1546M | para-PAY; I1525M | para-PAZ; I1546M | para-PBA; I1480M | para-PBB; Y874C | para-PBC; I1470M | para-PBD; Y919C | para-PBE
reported_pr_change=I1545M
comment=One of two amino acid substitutions in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
point mutation
na_change=G16367719C
pr_change=G1571R | para-PA; G1571R | para-PB; G1571R | para-PC; G1554R | para-PD; G1548R | para-PE; G1548R | para-PF; G1527R | para-PG; G1537R | para-PH; G1519R | para-PI; G1540R | para-PJ; G1516R | para-PK; G1527R | para-PL; G1540R | para-PM; G1540R | para-PN; G1532R | para-PO; G1561R | para-PP; G1516R | para-PQ; G1519R | para-PR; G1540R | para-PS; G1550R | para-PT; G1558R | para-PU; G1537R | para-PV; G1542R | para-PW; G1565R | para-PX; G1578R | para-PY; G1529R | para-PZ; G1524R | para-PAA; G1526R | para-PAB; G1524R | para-PAC; G1526R | para-PAD; G1548R | para-PAE; G1550R | para-PAF; G1529R | para-PAG; G1547R | para-PAH; G1526R | para-PAI; G1572R | para-PAJ; G1537R | para-PAK; G1551R | para-PAL; G1523R | para-PAM; G1583R | para-PAN; G1553R | para-PAO; G1537R | para-PAP; G1529R | para-PAQ; R242T | para-PAR; G1507R | para-PAS; G1496R | para-PAT; R1127T | para-PAU; R1119T | para-PAV; G1502R | para-PAW; G1539R | para-PAX; G1572R | para-PAY; G1551R | para-PAZ; G1572R | para-PBA; G1506R | para-PBB; R874T | para-PBC; G1496R | para-PBD; R919T | para-PBE
reported_pr_change=G1571R
comment=One of two amino acid substitutions in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
point mutation
na_change=A16367795G
pr_change=I1545M | para-PA; I1545M | para-PB; I1545M | para-PC; I1528M | para-PD; I1522M | para-PE; I1522M | para-PF; I1501M | para-PG; I1511M | para-PH; I1493M | para-PI; I1514M | para-PJ; I1490M | para-PK; I1501M | para-PL; I1514M | para-PM; I1514M | para-PN; I1506M | para-PO; I1535M | para-PP; I1490M | para-PQ; I1493M | para-PR; I1514M | para-PS; I1524M | para-PT; I1532M | para-PU; I1511M | para-PV; I1516M | para-PW; I1539M | para-PX; I1552M | para-PY; I1503M | para-PZ; I1498M | para-PAA; I1500M | para-PAB; I1498M | para-PAC; I1500M | para-PAD; I1522M | para-PAE; I1524M | para-PAF; I1503M | para-PAG; I1521M | para-PAH; I1500M | para-PAI; I1546M | para-PAJ; I1511M | para-PAK; I1525M | para-PAL; I1497M | para-PAM; I1557M | para-PAN; I1527M | para-PAO; I1511M | para-PAP; I1503M | para-PAQ; Y242C | para-PAR; I1481M | para-PAS; I1470M | para-PAT; Y1127C | para-PAU; Y1119C | para-PAV; I1476M | para-PAW; I1513M | para-PAX; I1546M | para-PAY; I1525M | para-PAZ; I1546M | para-PBA; I1480M | para-PBB; Y874C | para-PBC; I1470M | para-PBD; Y919C | para-PBE
reported_pr_change=I1545M
comment=One of two amino acid substitutions in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
point mutation
na_change=A16367795G
pr_change=I1545M | para-PA; I1545M | para-PB; I1545M | para-PC; I1528M | para-PD; I1522M | para-PE; I1522M | para-PF; I1501M | para-PG; I1511M | para-PH; I1493M | para-PI; I1514M | para-PJ; I1490M | para-PK; I1501M | para-PL; I1514M | para-PM; I1514M | para-PN; I1506M | para-PO; I1535M | para-PP; I1490M | para-PQ; I1493M | para-PR; I1514M | para-PS; I1524M | para-PT; I1532M | para-PU; I1511M | para-PV; I1516M | para-PW; I1539M | para-PX; I1552M | para-PY; I1503M | para-PZ; I1498M | para-PAA; I1500M | para-PAB; I1498M | para-PAC; I1500M | para-PAD; I1522M | para-PAE; I1524M | para-PAF; I1503M | para-PAG; I1521M | para-PAH; I1500M | para-PAI; I1546M | para-PAJ; I1511M | para-PAK; I1525M | para-PAL; I1497M | para-PAM; I1557M | para-PAN; I1527M | para-PAO; I1511M | para-PAP; I1503M | para-PAQ; Y242C | para-PAR; I1481M | para-PAS; I1470M | para-PAT; Y1127C | para-PAU; Y1119C | para-PAV; I1476M | para-PAW; I1513M | para-PAX; I1546M | para-PAY; I1525M | para-PAZ; I1546M | para-PBA; I1480M | para-PBB; Y874C | para-PBC; I1470M | para-PBD; Y919C | para-PBE
reported_pr_change=I1545M
comment=One of two amino acid substitutions in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
point mutation
na_change=G16367719C
pr_change=G1571R | para-PA; G1571R | para-PB; G1571R | para-PC; G1554R | para-PD; G1548R | para-PE; G1548R | para-PF; G1527R | para-PG; G1537R | para-PH; G1519R | para-PI; G1540R | para-PJ; G1516R | para-PK; G1527R | para-PL; G1540R | para-PM; G1540R | para-PN; G1532R | para-PO; G1561R | para-PP; G1516R | para-PQ; G1519R | para-PR; G1540R | para-PS; G1550R | para-PT; G1558R | para-PU; G1537R | para-PV; G1542R | para-PW; G1565R | para-PX; G1578R | para-PY; G1529R | para-PZ; G1524R | para-PAA; G1526R | para-PAB; G1524R | para-PAC; G1526R | para-PAD; G1548R | para-PAE; G1550R | para-PAF; G1529R | para-PAG; G1547R | para-PAH; G1526R | para-PAI; G1572R | para-PAJ; G1537R | para-PAK; G1551R | para-PAL; G1523R | para-PAM; G1583R | para-PAN; G1553R | para-PAO; G1537R | para-PAP; G1529R | para-PAQ; R242T | para-PAR; G1507R | para-PAS; G1496R | para-PAT; R1127T | para-PAU; R1119T | para-PAV; G1502R | para-PAW; G1539R | para-PAX; G1572R | para-PAY; G1551R | para-PAZ; G1572R | para-PBA; G1506R | para-PBB; R874T | para-PBC; G1496R | para-PBD; R919T | para-PBE
reported_pr_change=G1571R
comment=One of two amino acid substitutions in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change.
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
para transcripts are detected in the eye, in thoracic ganglia, and in cortical regions of the brain.
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
para protein was localized to head membranes. It is found in cell bodies but not axons.
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 205
head, virgin 1-day female
 
 65
head, virgin 4-day female
 
 71
head, virgin 20-day female
 
 19
head, mated 1-day female
 
 77
head, mated 4-day female
 
 73
head, mated 20-day female
 
 24
head, mated 1-day male
 
 95
head, mated 4-day male
 
 142
head, mated 20-day male
 
 72
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 14
carcass, larvae L3 wandering
 
 2
carcass, 1-day adult
 
 11
carcass, 4-day adult
 
 12
carcass, 20-day adult
 
 6
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 3
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 (205)
head, virgin 1-day female
 (65)
head, virgin 4-day female
 (71)
head, virgin 20-day female
 
 19
head, mated 1-day female
 (77)
head, mated 4-day female
 (73)
head, mated 20-day female
 
 24
head, mated 1-day male
 (95)
head, mated 4-day male
 (142)
head, mated 20-day male
 (72)
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 14
carcass, larvae L3 wandering
 
 2
carcass, 1-day adult
 
 11
carcass, 4-day adult
 
 12
carcass, 20-day adult
 
 6
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 3
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 (205)
head, virgin 1-day female
 
 65
head, virgin 4-day female
 
 71
head, virgin 20-day female
 
 19
head, mated 1-day female
 
 77
head, mated 4-day female
 
 73
head, mated 20-day female
 
 24
head, mated 1-day male
 
 95
head, mated 4-day male
 (142)
head, mated 20-day male
 
 72
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 14
carcass, larvae L3 wandering
 
 2
carcass, 1-day adult
 
 11
carcass, 4-day adult
 
 12
carcass, 20-day adult
 
 6
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 3
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 205
head, virgin 1-day female
 
 65
head, virgin 4-day female
 
 71
head, virgin 20-day female
 
 19
head, mated 1-day female
 
 77
head, mated 4-day female
 
 73
head, mated 20-day female
 
 24
head, mated 1-day male
 
 95
head, mated 4-day male
 
 142
head, mated 20-day male
 
 72
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 14
carcass, larvae L3 wandering
 
 2
carcass, 1-day adult
 
 11
carcass, 4-day adult
 
 12
carcass, 20-day adult
 
 6
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 3
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 205
head, virgin 1-day female
 
 65
head, virgin 4-day female
 
 71
head, virgin 20-day female
 
 19
head, mated 1-day female
 
 77
head, mated 4-day female
 
 73
head, mated 20-day female
 
 24
head, mated 1-day male
 
 95
head, mated 4-day male
 
 142
head, mated 20-day male
 
 72
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 14
carcass, larvae L3 wandering
 
 2
carcass, 1-day adult
 
 11
carcass, 4-day adult
 
 12
carcass, 20-day adult
 
 6
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 3
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 (205)
head, virgin 1-day female
 (65)
head, virgin 4-day female
 (71)
head, virgin 20-day female
 
 19
head, mated 1-day female
 (77)
head, mated 4-day female
 (73)
head, mated 20-day female
 
 24
head, mated 1-day male
 (95)
head, mated 4-day male
 (142)
head, mated 20-day male
 (72)
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 14
carcass, larvae L3 wandering
 
 2
carcass, 1-day adult
 
 11
carcass, 4-day adult
 
 12
carcass, 20-day adult
 
 6
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 3
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 (205)
head, virgin 1-day female
 
 65
head, virgin 4-day female
 
 71
head, virgin 20-day female
 
 19
head, mated 1-day female
 
 77
head, mated 4-day female
 
 73
head, mated 20-day female
 
 24
head, mated 1-day male
 
 95
head, mated 4-day male
 142
head, mated 20-day male
 
 72
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 14
carcass, larvae L3 wandering
 
 2
carcass, 1-day adult
 
 11
carcass, 4-day adult
 
 12
carcass, 20-day adult
 
 6
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 3
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 1
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 205
head, virgin 1-day female
 
 65
head, virgin 4-day female
 
 71
head, virgin 20-day female
 
 19
head, mated 1-day female
 
 77
head, mated 4-day female
 
 73
head, mated 20-day female
 
 24
head, mated 1-day male
 
 95
head, mated 4-day male
 
 142
head, mated 20-day male
 
 72
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 1
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 14
carcass, larvae L3 wandering
 
 2
carcass, 1-day adult
 
 11
carcass, 4-day adult
 
 12
carcass, 20-day adult
 
 6
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 3
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 1
embryo 16-18hr
 
 5
embryo 18-20hr
 
 8
embryo 20-22hr
 
 8
embryo 22-24hr
 
 10
larva L1
 
 9
larva L2
 
 3
larva L3 12hr old
 
 1
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 1
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 1
white prepupae 24hr
 
 1
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 4
adult male 01day
 
 5
adult male 05day
 
 5
adult male 30day
 
 4
adult female 01day
 
 2
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 1
embryo 16-18hr
 
 5
embryo 18-20hr
 
 8
embryo 20-22hr
 
 8
embryo 22-24hr
 
 10
larva L1
 
 9
larva L2
 
 3
larva L3 12hr old
 
 1
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 1
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 1
white prepupae 24hr
 
 1
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 4
adult male 01day
 
 5
adult male 05day
 
 5
adult male 30day
 
 4
adult female 01day
 
 2
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 1
embryo 16-18hr
 
 5
embryo 18-20hr
 
 8
embryo 20-22hr
 
 8
embryo 22-24hr
 
 10
larva L1
 
 9
larva L2
 
 3
larva L3 12hr old
 
 1
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 1
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 1
white prepupae 24hr
 
 1
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 4
adult male 01day
 
 5
adult male 05day
 
 5
adult male 30day
 
 4
adult female 01day
 
 2
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 1
embryo 16-18hr
 
 5
embryo 18-20hr
 
 8
embryo 20-22hr
 
 8
embryo 22-24hr
 
 10
larva L1
 
 9
larva L2
 
 3
larva L3 12hr old
 
 1
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 1
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 1
white prepupae 24hr
 
 1
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 4
adult male 01day
 
 5
adult male 05day
 
 5
adult male 30day
 
 4
adult female 01day
 
 2
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 1
embryo 16-18hr
 
 5
embryo 18-20hr
 
 8
embryo 20-22hr
 
 8
embryo 22-24hr
 
 10
larva L1
 
 9
larva L2
 
 3
larva L3 12hr old
 
 1
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 1
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 1
white prepupae 24hr
 
 1
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 4
adult male 01day
 
 5
adult male 05day
 
 5
adult male 30day
 
 4
adult female 01day
 
 2
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 1
embryo 16-18hr
 
 5
embryo 18-20hr
 
 8
embryo 20-22hr
 
 8
embryo 22-24hr
 
 10
larva L1
 
 9
larva L2
 
 3
larva L3 12hr old
 
 1
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 1
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 1
white prepupae 24hr
 
 1
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 4
adult male 01day
 
 5
adult male 05day
 
 5
adult male 30day
 
 4
adult female 01day
 
 2
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 1
embryo 16-18hr
 
 5
embryo 18-20hr
 
 8
embryo 20-22hr
 
 8
embryo 22-24hr
 
 10
larva L1
 
 9
larva L2
 
 3
larva L3 12hr old
 
 1
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 1
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 1
white prepupae 24hr
 
 1
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 4
adult male 01day
 
 5
adult male 05day
 
 5
adult male 30day
 
 4
adult female 01day
 
 2
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 0
embryo 06-08hr
 
 0
embryo 08-10hr
 
 0
embryo 10-12hr
 
 0
embryo 12-14hr
 
 0
embryo 14-16hr
 
 1
embryo 16-18hr
 
 5
embryo 18-20hr
 
 8
embryo 20-22hr
 
 8
embryo 22-24hr
 
 10
larva L1
 
 9
larva L2
 
 3
larva L3 12hr old
 
 1
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 1
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 0
white prepupae 12hr
 
 1
white prepupae 24hr
 
 1
pupae 2d postWPP
 
 6
pupae 3d postWPP
 
 9
pupae 4d postWPP
 
 4
adult male 01day
 
 5
adult male 05day
 
 5
adult male 30day
 
 4
adult female 01day
 
 2
adult female 05day
 
 1
adult female 30day
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 1
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 1
embryonic S1
 
 0
embryonic S3
 
 1
leg disc CME L1
 
 0
wing disc CME-W2
 
 3
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 1
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 1
embryonic S1
 
 0
embryonic S3
 
 1
leg disc CME L1
 
 0
wing disc CME-W2
 
 3
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 1
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 1
embryonic S1
 
 0
embryonic S3
 
 1
leg disc CME L1
 
 0
wing disc CME-W2
 
 3
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 1
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 1
embryonic S1
 
 0
embryonic S3
 
 1
leg disc CME L1
 
 0
wing disc CME-W2
 
 3
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 1
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 1
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 1
embryonic S1
 
 0
embryonic S3
 
 1
leg disc CME L1
 
 0
wing disc CME-W2
 
 3
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 1
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 1
embryonic S1
 
 0
embryonic S3
 
 1
leg disc CME L1
 
 0
wing disc CME-W2
 
 3
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 1
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 1
embryonic S1
 
 0
embryonic S3
 
 1
leg disc CME L1
 
 0
wing disc CME-W2
 
 3
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 1
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 1
embryonic S1
 
 0
embryonic S3
 
 1
leg disc CME L1
 
 0
wing disc CME-W2
 
 3
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 1
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 0
ovary OSS
 
 1
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 9
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 2
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 28
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 32
Ethanol 2.5% 3 hrs, larvae L3
 
 3
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 8
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 10
Paraquat 5 mM 48 hrs, 4-day adult
 
 7
Paraquat 10 mM 48 hrs, 4-day adult
 
 7
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 9
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 2
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 (28)
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 (32)
Ethanol 2.5% 3 hrs, larvae L3
 
 3
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 8
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 10
Paraquat 5 mM 48 hrs, 4-day adult
 
 7
Paraquat 10 mM 48 hrs, 4-day adult
 
 7
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 9
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 2
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 28
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 32
Ethanol 2.5% 3 hrs, larvae L3
 
 3
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 8
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 10
Paraquat 5 mM 48 hrs, 4-day adult
 
 7
Paraquat 10 mM 48 hrs, 4-day adult
 
 7
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 9
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 2
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 28
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 32
Ethanol 2.5% 3 hrs, larvae L3
 
 3
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 8
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 10
Paraquat 5 mM 48 hrs, 4-day adult
 
 7
Paraquat 10 mM 48 hrs, 4-day adult
 
 7
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 9
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 2
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 28
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 32
Ethanol 2.5% 3 hrs, larvae L3
 
 3
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 8
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 10
Paraquat 5 mM 48 hrs, 4-day adult
 
 7
Paraquat 10 mM 48 hrs, 4-day adult
 
 7
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 9
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 2
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 28
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 32
Ethanol 2.5% 3 hrs, larvae L3
 
 3
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 8
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 10
Paraquat 5 mM 48 hrs, 4-day adult
 
 7
Paraquat 10 mM 48 hrs, 4-day adult
 
 7
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 9
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 2
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 28
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 32
Ethanol 2.5% 3 hrs, larvae L3
 
 3
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 8
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 10
Paraquat 5 mM 48 hrs, 4-day adult
 
 7
Paraquat 10 mM 48 hrs, 4-day adult
 
 7
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 9
cold shock, 4-day adult
 
 8
heat shock, 4-day adult
 
 2
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 0
Cadmium 50 mM 48 hrs, 4-day adult
 
 4
Cadmium 100 mM 48 hrs, 4-day adult
 
 9
Copper 0.5 mM 12 hrs, larvae L3
 
 1
Copper 15 mM 48 hrs, 4-day adult
 
 28
Zinc 5 mM 12 hrs, larvae L3
 
 1
Zinc 4.5 mM 48 hrs, 4-day adult
 
 32
Ethanol 2.5% 3 hrs, larvae L3
 
 3
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 1
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 8
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 10
Paraquat 5 mM 48 hrs, 4-day adult
 
 7
Paraquat 10 mM 48 hrs, 4-day adult
 
 7
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 89 )
For All Classical Alleles Show

Allele of paraClassMutagenStocksKnown lesion
parad04188
1 --
paraEY08038
1 Yes
paraEY157261 --
paraf028951 --
parahd81 Yes
paraKG01807
1 --
paraMB08120
1 --
paraST761 --
parats1heat sensitive hypomorphic allele - genetic evidence1 Yes
parahd5amorphic allele - genetic evidence0 Yes
paraID30amorphic allele - genetic evidence
0 Yes
paralk2amorphic allele - genetic evidence, loss of function allele
0 Yes
paralk5amorphic allele - genetic evidence, loss of function allele
0 Yes
para1030 --
para1410 --
para20 --
para30 --
para40 --
para50 --
para600 --
para630 --
para60 --
para740 Yes
para70 --
para838-2-140 --
parabss1:EY080380 Yes
parabss1gain of function allele
0 Yes
parabss2
0 Yes
paracs
0 --
parad012130 --
paraDN430 Yes
paraDN70 Yes
paraDTS20 Yes
paraGEFS+0 Yes
parahd10 Yes
parahd20 Yes
parahd2r0 --
parahd90 Yes
paraID7
0 --
paraJS1-Ex100 Yes
paraJS1-Ex110 Yes
paraJS1-Ex120 Yes
paraJS1-Ex130 Yes
paraJS1-Ex140 Yes
paraJS1-Ex150 Yes
paraJS1-Ex160 Yes
paraJS1-Ex180 Yes
paraJS1-Ex10 Yes
paraJS1-Ex20 Yes
paraJS1-Ex30 Yes
paraJS1-Ex40 Yes
paraJS1-Ex50 Yes
paraJS1-Ex60 Yes
paraJS1-Ex70 Yes
paraJS1-Ex80 Yes
paraJS1-Ex90 Yes
paraJS1hypomorphic allele - genetic evidence
0 Yes
paralk1
0 --
paralk4
0 --
paraMS20 --
paraND1
0 --
paraND2
0 --
paraND3
0 --
paraOcd-10 Yes
paraOcd-2
0 Yes
paraOcd-3
0 Yes
paraOcd-4
0 Yes
paraOcd-5
0 Yes
paraOcd-6
0 Yes
paraOcd-7
0 Yes
paraPG1160 --
paraPL100 --
parasbl-10 --
parasbl-20 --
parasbl-30 Yes
parasbl-40 Yes
parasbl-50 --
parasbl-60 --
paraST109
0 --
paraST420 --
paraTP10
0 --
paraTP11
0 --
paraTP3
0 --
paraTP8
0 --
parats1150 Yes
parats20 Yes
parats3
0 --
parats4
0 --
paraunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 10 )
For All Alleles Carried on Transgenic Constructs Show

Allele of paraClassMutagenStocksKnown lesion
paraGD33922 Yes
paraHMS008681 Yes
paraJF012451 Yes
paraJF014691 Yes
paraKK1085341 Yes
para13.5.Scer\UAS0 Yes
parahs.PR0 Yes
paraL1699F.Scer\UAS.1-10 Yes
paraScer\UAS.1-10 Yes
paraScer\UAS.cGa0 Yes
hide Aneuploid Aberrations
Duplicated in
Disrupted in
Not duplicated in
Not disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
heat-shock construct
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
insertion of enhancer trap
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 15 unique terms )
hide Terms Based on Experimental Evidence ( 10 terms )
Molecular Function
CV term
References
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from direct assay
inferred from mutant phenotype
inferred from direct assay
inferred from genetic interaction with kcc
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component
CV term
References
hide Terms Based on Predictions or Assertions ( 11 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with mouse Scn8a
non-traceable author statement
Biological Process
CV term
References
non-traceable author statement
non-traceable author statement
non-traceable author statement
traceable author statement
Cellular Component
CV term
References
non-traceable author statement
inferred from sequence or structural similarity with mouse Scn8a
hide Sequence Ontology: Class of Gene
 
hide Interactions & Pathways
hide Summary of Physical Interactions
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
para allele
Gene
References
hide External Data
Linkouts
hide Orthologs
hide OrthoDB Orthologs (87) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
hideOrthologs in Drosophila Species (EOG6CVGS5)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila sechellia
 
 
 
Drosophila erecta
 
Y
 
Drosophila yakuba
 
Y
 
Drosophila ananassae
 
Y
 
Drosophila pseudoobscura pseudoobscura
 
Y
 
Drosophila persimilis
 
Y
 
Drosophila willistoni
 
Y
 
Drosophila virilis
 
 
 
Drosophila mojavensis
 
Y
 
Drosophila grimshawi
 
 
 
hideOrthologs in non-Drosophila Dipterans (EOG61ZFJS)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Aedes aegypti
Yellow fever mosquito 
 
Aedes aegypti
Yellow fever mosquito 
 
Anopheles gambiae
Malaria mosquito 
 
Culex quinquefasciatus
Southern house mosquito 
 
Culex quinquefasciatus
Southern house mosquito 
 
hideOrthologs in non-Dipteran Insects (EOG6HHMX6)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\GB42728
 
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG009947
 
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH14927
 
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH14926
 
Atta cephalotes
Leafcutter ant 
Acep\ACEP17888
 
Atta cephalotes
Leafcutter ant 
Acep\ACEP17885
 
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO12849
 
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL21509
 
Linepithema humile
Argentine ant 
Lhum\LH11916
 
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18519
 
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18520
 
Solenopsis invicta
Red fire ant 
Sinv\SINV17267
 
Acyrthosiphon pisum
Pea aphid 
 
Acyrthosiphon pisum
Pea aphid 
 
Bombyx mori
Silkmoth 
 
Pediculus humanus
Human body louse 
 
Tribolium castaneum
Red flour beetle 
 
Tribolium castaneum
Red flour beetle 
 
hideOrthologs in non-Insect Arthropods (EOG62547H)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
 
Ixodes scapularis
Deer tick 
 
hideOrthologs in non-Arthropod Metazoa (EOG6GXTDD)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
hide Human Orthologs (9)
Gene
OMIM
HGNC
hideAAA Orthologs (7) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila erecta
Drosophila yakuba
Drosophila ananassae
Drosophila pseudoobscura pseudoobscura
Drosophila persimilis
Drosophila willistoni
Drosophila mojavensis
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 15 )
Bloomington
Harvard
Kyoto
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 57 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
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cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
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R. Williamson.
 
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Source for database identity of
Source for database merge of
Source for merge of: para bss
Source for merge of: para Ocd
Additional comments
"bss" stated to correspond to "Dsp1".
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Sensitivity of para to DDT is not lowered by the 'super-kdr' mutation M918T, although this is reduced 10-fold by the 'kdr' mutation L1014F.
The voltage dependent deactivation of para is made more negative by DDT.
RNAi generated by PCR using primers directed to this gene causes a cell growth and viability phenotype when assayed in Kc167 and S2R+ cells.
RNAi screen using dsRNA made from templates generated with primers directed against this gene causes a cell growth and viability phenotype when assayed in Kc167 and S2R+ cells.
1-2μM AahIT significantly increases the Na+ current mediated by para as assayed in Xenopus oocytes. Domain 2 of para confers this AahIT sensitivity.
para transcripts undergo adenosine-to-inosine RNA editing via a mechanism that apparently requires dsRNA secondary structure formation encompassing the edited exon and the downstream intron. The mlenap-ts1 mutation results in the occurrence of a "splicing catastrophe" of the para transcript in the region of the RNA editing site; more than 80% of para transcripts in this background are aberrant, owing to internal deletions that include the edited para exon.
Rearing parats1 embryos, at restrictive temperatures, starting at different times during synaptogenesis, reveals neural activity at a certain period of development profoundly affects the distribution of GluRIIA receptors.
Intragenic and extragenic suppressors of bss are isolated using an X ray screen of bss mutants for loss of paralytic behaviour.
Heterologous expression of para sodium channels in Xenopus oocytes is poor. Coexpression of para with tipE results in robust sodium currents. The biophysical and biochemical properties of invertebrate and vertebrate neuronal sodium channels are distinct.
The region that includes para contains a complex of neurally expressed genes, Cnx14D, Arp14D, Pp2B-14D and Cap. These five genes may represent a functionally related group sharing some coordinate regulatory mechanism.
Mutations in Khc enhance the para and mel and suppress the Sh and eag mutant phenotypes.
tipE encodes a novel integral membrane protein that dramatically stimulates functional para expression in Xenopus oocytes.
The role of alternative splicing of the para gene in regulating sodium current expression has been investigated.
The pattern of expression of para throughout development has been analysed.
The "sbl" alleles represent a class of para alleles, and define a novel class of sodium channel mutation.
The genomic organisation of the para locus has been analysed. A number of developmentally regulated alternative splice products have been identified.
Distribution of para transcripts and protein studied in wild type and mlenap-ts1 mutants, where amount of para product is reduced.
Ion channel mutants alter synaptic activity at the embryonic neuromuscular junction (NMJ). GluRIIA expression in the postsynaptic membrane is reduced by changes in presynaptic electrical activity. Synaptic transmission is blocked in para mutants in a temperature-dependent manner. Presynaptic electrical activity during embryonic synaptogenesis is constitutively required for GluRIIA expression at the NMJ and to induce receptor clustering at the NMJ. The size of the synaptic domain depends on the level of neural activity during embryonic synaptogenesis.
para RNA expression in pupae and adults has been studied.
Mutant analysis of para (unspecified) provides evidence for the participation of a G0-like protein in learning and memory. Sex-dependent enhancement in pertussis toxin catalysed ADP-ribosylation with respect to wild type: attributed in part to an increase in the α subunit of the G0-like protein.
The olfactory phenotypes of para mutants has been studied with respect to courtship behaviour.
Changes in the level of para+ expression can strongly influence neuronal excitability.
Scaffold attachment regions in the region surrounding para have been mapped.
Mutations of para cause abnormalities in the electroretinogram (ERG) and/or prolonged depolarization after potential (PDA).
Viable alleles of para perform aberrantly in multiple olfactory paradigms as both larvae and adults.
A cDNA that probably corresponds to the para locus has been cloned and sequenced.
The para locus encodes an essential function. Genetic, electrophysiological, behavioral and pharmacological studies of mle and para mutants suggest that they effect sodium channels and the genes may encode different subunits.
mlenap-ts1 is unconditionally lethal in a double mutant with parats1 (death occurring during 1st larval instar).
Mutations of para have been recovered both as a consequence of their paralytic phenotype (as para) and as a consequence of their olfactory phenotype (as sbl). For the para alleles: exposure to 29-30oC causes rapid paralysis that is quickly reversed on shift to 22-25oC. Larvae are paralyzed, too, at somewhat higher temperatures. Flies of some para strains seem sluggish at lower temperatures. When these mutants are still paralyzed (i.e. at high temperatures), they appear to retain many of their 'vital functions,' their heart still beats (Grigliatti, Suzuki and Williamson, 1972) and they quickly regain normal behavior when shifted to 22oC after several hours at 29oC (Suzuki, Grigliatti and Williamson, 1971); in fact, after a less prolonged exposure (30 min) to high temperature, the still-heated mutant flies regain weak mobility and are even able to right themselves and walk (Suzuki, Grigliatti and Williamson, 1971). parats1/+ adults become paralyzed at 40oC within one min <up>10 min required to paralyze wild-type (Hall, 1973)</up>. parats1 larvae stop 'tracking' at high temperature (Wu, Ganetzky, Jan, Jan and Benzer, 1978). parats1 is nearly unconditionally lethal when uncovered by a deletion or other para-locus aberration, whereas other alleles lead to reduced viability (unconditional) when heterozygous with chromosomal aberrations at the locus (Ganetzky, 1984). Action potentials in larval nerves are reversibly temperature-sensitive (Wu and Ganetzky, 1980) and the same can be inferred for at least some adult neurons (indicated by brain stimulation and recording of responses in thoracic muscles (Siddiqi and Benzer, 1976; Benshalom and Dagan, 1981). Other 'excitable phenomena,' such as the electroretinogram responses and synaptic transmission, appear to be normal in parats1 adults at high temperature (Suzuki, Grigliatti and Williamson, 1971; Siddiqi and Benzer, 1976); also parats1 does not block action potentials in the cervical giant fiber at high temperature (Nelson and Baird, 1985) in contrast to results of recording from larval motor neurons (Wu and Ganetzky, 1980); other studies of the giant fiber pathway (involving adult mosaics bilaterally split, externally, for parats1 and para+) indicate that at least certain elements of the pathway (if not the giant fiber itself) fail to fire action potentials at elevated temperature (Benshalom and Dagan, 1981) and recordings from mosaics of this type also suggest 'functional coupling' between left and homologous right sides of this giant fiber pathway (Benshalom and Dagan, 1985). parats1 causes first larval instar death when in combination with mlenap-ts1 (Wu and Ganetzky, 1980; Ganetzky, 1984); similar lethality occurs when para+ dosage is decreased in a mlenap-ts1 background (Ganetzky, 1984). Other para alleles, in combination with mlenap-ts1, lead to reduced viability, with parats115 having the strongest effect, followed by paraST76 and paraST109 (Ganetzky, 1984). In combination with the tipE mutation, para mutations again cause decreased viability, but the allele-specific interactions are different from those of the series just noted <up>i.e. with respect to mlenap-ts1 (Ganetzky, 1986)</up>. Surviving para; tipE double mutants are weak and show accentuated heat-sensitivity (in regard to mobility and nerve conduction); para alleles are dominant for behavioral defects in a homozygous tipE background (Ganetzky, 1985). In adults doubly mutant for parats1 and mlenap-ts1, sensory cells (developing from imaginal discs in mosaics) appear to have no nerve conduction (Burg and Wu, 1984). In mosaics involving para mutations only one allele (paraST109) causes all legs to be either paralyzed or normal in different individual gynandromorphs (Siddiqi and Benzer, 1976), in contrast to independent paralysis of legs in mosaics constructed with respect to parats1 (Grigliatti, Suzuki and Williamson, 1972; Siddiqi and Benzer, 1978). These results (and others, e.g. Benshalom and Dagan, 1985), reveal poor correlation of the externally mutant genotype (in mosaics) and behavioral or physiological malfunctions <up>consistent with internal (no doubt neural) 'foci' for para's action</up>. In other studies, parats1 mosaics with mutant heads (scored externally) usually are immobile at high temperature, but maintain normal posture (Suzuki, Grigliatti and Williamson, 1971; Grigliatti, Suzuki and Williamson, 1972). Exposure of parats1 males to high temperature causes arrest of the oscillator underlying rhythmic component of courtship song (Kyriacou and Hall, 1985). At permissive tempe
 
dominant cold-sensitive, reversible paralytic; heterozygous mutant females begin uncoordinated behavior (progressively: abnormal leg movements, leg stretching, wing fluttering) on shift from 25oC to 18-20oC; paralysis eventually occurs, and recovery is gradual on shift back to higher temperatures; critical temperature to include the debilitations is ca. 2oC lower from Ocd7 than for other alleles; also males hemizygous for Ocd7 have better viability than those expressing the other alleles, with Ocd4 being the most severely affected i.e., nearly lethal (Ocd4 also causes near lethality when heterozygous with any of the other alleles); at 25oC, mutant males walk in reeling manner and fall over frequently; none can fly and attempts to coax jumps (to initiate flight) cause the males merely to fall over when touched; these phenotypes also seen in homozygotes and heteroallelic combinations; certain of the homozygous mutant females (e.g. Ocd2 and Ocd3) hold their wings in drooped position; also seen in Ocd1 males; this phenotype also observed in Ocd2/+ and Ocd3/+ females, which also walk in unsteady manner; other alleles, when heterozygous, allow for seemingly normal behavior at 25oC, except that their legs shake under etherization (with Ocd4 causing the strongest aberrant shaking). Abrupt, anomalous changes in Arrhenius activation energy of the mitochondrial enzyme, succinate cytochrome c reductase, are seen at temperatures close to those which induce paralysis (Sondergaard et al. 1975). Two-dimension gels of mitochondria isolated from Ocd1 contain an additional polypeptide not seen in extracts of wild-type (Sondergaard, 1986).
 
Separable by recombination from eas, which causes a similar phenotype and to which bss is closely linked.
 
Mechanical shock or vortexing induces paralysis lasting for 2-3 minutes; heterozygous female are paralysed for 40-50 seconds. Homozygotes and hemizygotes have abnormally prolonged release of neurotransmitter at larval neuromuscular junctions, which is associated with multiple firing of action potentials in the nerves; behavioral and electrophysiological phenotypes suppressed by mlenap-ts1 at its permissive (low) temperature.
 
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Entrez Gene - A searchable database of RefSeq genes.
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InterPro domains - A database of protein families, domains, and functional sites
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hide Synonyms & Secondary IDs ( 25 )
Reported As
Symbol Synonym
l(1)14Da
 
l(1)ESHS48
 
Name Synonym
bangsenseless
bang sensitive
Out cold
 
Secondary FlyBase IDs
  • FBgn0000231
  • FBgn0001727
  • FBgn0002980
  • FBgn0003036
  • FBgn0003320
  • FBgn0260993
hide References ( 366 )
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hide Recent research papers ( 23 )
Burg and Wu, 2012, J. Neurogenet. 26(2): 189--197
Mechanical and Temperature Stressor-Induced Seizure-and-Paralysis Behaviors in Drosophila Bang-Sensitive Mutants. [FBrf0218899]
Garber et al., 2012, Fly 6(1): 57--67
Effect of sodium channel abundance on Drosophila development, reproductive capacity and aging. [FBrf0218441]
Iyengar et al., 2012, J. Neurogenet. 26(3-4): 306--316
Automated quantification of locomotion, social interaction, and mate preference in Drosophila mutants. [FBrf0220093]
Lagisz et al., 2012, Heredity 108(6): 602--608
Two distinct genomic regions, harbouring the period and fruitless genes, affect male courtship song in Drosophila montana. [FBrf0218390]
Lin et al., 2012, J. Neurosci. 32(21): 7267--7277
Activity-dependent alternative splicing increases persistent sodium current and promotes seizure. [FBrf0218418]
Pines et al., 2012, Nat. Cell Biol. 14(9): 935--943
Mechanical force regulates integrin turnover in Drosophila in vivo. [FBrf0219413]
Plavicki et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(5): 1578--1583
Homeobox gene distal-less is required for neuronal differentiation and neurite outgrowth in the Drosophila olfactory system. [FBrf0217395]
Savva et al., 2012, Nat. Commun. 3: 790
Auto-regulatory RNA editing fine-tunes mRNA re-coding and complex behaviour in Drosophila. [FBrf0218141]
Simon et al., 2012, Genes Brain Behav. 11(2): 243--252
A simple assay to study social behavior in Drosophila: measurement of social space within a group(1). [FBrf0217332]
Stewart et al., 2012, J. Neurosci. 32(34): 11631--11642
Katanin p60-like1 Promotes Microtubule Growth and Terminal Dendrite Stability in the Larval Class IV Sensory Neurons of Drosophila. [FBrf0219283]
Sun et al., 2012, J. Neurosci. 32(41): 14145--14155
A knock-in model of human epilepsy in Drosophila reveals a novel cellular mechanism associated with heat-induced seizure. [FBrf0219676]
Tsai et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(43): 17699--17704
Activity-dependent retrograde laminin A signaling regulates synapse growth at Drosophila neuromuscular junctions. [FBrf0219768]
Al-Hasan et al., 2011, Behav. Genet. 41(5): 734--745
Tolerance to anesthesia depends on synaptic proteins. [FBrf0214786]
Bao et al., 2011, J. Neurogenet. 25(4): 201--206
Overexpression of Human MRP1 in Neurons causes resistance to Antiepileptic Drugs in Drosophila Seizure Mutants. [FBrf0216724]
Burton et al., 2011, Insect Biochem. Mol. Biol. 41(9): 723--732
Differential resistance of insect sodium channels with kdr mutations to deltamethrin, permethrin and DDT. [FBrf0214046]
Gur et al., 2011, J. Biol. Chem. 286(40): 35209--35217
Elucidation of the Molecular Basis of Selective Recognition Uncovers the Interaction Site for the Core Domain of Scorpion {alpha}-Toxins on Sodium Channels. [FBrf0216246]
He et al., 2011, PLoS ONE 6(1): e14510
Localization of Receptor Site on Insect Sodium Channel for Depressant β-toxin BmK IT2. [FBrf0212808]
Leiserson et al., 2011, Glia 59(2): 320--332
Drosophila glia use a conserved cotransporter mechanism to regulate extracellular volume. [FBrf0212638]
Li et al., 2011, BMC Evol. Biol. 11: 337
A remarkably stable TipE gene cluster: evolution of insect Para sodium channel auxiliary subunits. [FBrf0217002]
Nagel and Wilson, 2011, Nat. Neurosci. 14(2): 208--216
Biophysical mechanisms underlying olfactory receptor neuron dynamics. [FBrf0212901]
Parker et al., 2011, Genetics 187(2): 523--534
Drosophila as a Model for Epilepsy: bss Is a Gain-of-Function Mutation in the Para Sodium Channel Gene That Leads to Seizures. [FBrf0213034]
Zhang et al., 2011, Insect Biochem. Mol. Biol. 41(7): 451--458
Molecular characterization and functional expression of the DSC1 channel. [FBrf0213974]
Zhou et al., 2011, Proc. Natl. Acad. Sci. U.S.A. 108(6): 2349--2354
Experimental selection of hypoxia-tolerant Drosophila melanogaster. [FBrf0213011]
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All reviews listed in FlyBase were published before 2011