A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\Mhc

General Information
SymbolDmel\MhcSpeciesD. melanogaster
NameMyosin heavy chainAnnotation symbolCG17927
Feature typeprotein_coding_geneFlyBase IDFBgn0264695
Gene Model StatusCurrent Stock availability 12 publicly available
Also Known AsMRP, Ifm(2)RU1, ifm(2)RU2, DmMHC, ifm(2)2, mMHC, Mhc36B, Sht
Genomic Location
Chromosome (arm)2LRecombination map2-52 or 2-54.7
Cytogenetic map36A8-36B2Sequence location2L:16,766,734..16,788,766 [+]

Genomic Maps

GBrowse View Help
Beta
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene Myosin heavy chain is referred to in FlyBase by the symbol Dmel\Mhc (CG17927, FBgn0264695). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: actin-dependent ATPase activity; protein homodimerization activity; structural constituent of muscle. There is experimental evidence for 13 unique biological process terms, many of which group under: single-organism developmental process; cellular component organization or biogenesis; muscle cell differentiation; actin filament-based process; localization; cellular component movement; organelle organization; biological regulation; flight; system process. 135 alleles are reported. The phenotypes of these alleles are annotated with: organ system; adult segment; indirect flight muscle; organ system subdivision; cytoplasmic part; organelle; sarcomere; thoracic segment; spermatozoon; male accessory gland; mesothoracic femur. It has 20 annotated transcripts and 20 annotated polypeptides. Protein features are: IQ motif, EF-hand binding site; Myosin head, motor domain; Myosin tail; Myosin, N-terminal, SH3-like. Gene sequence location is 2L:16766734..16788766.

User Contributed Data
hide Phenotypic Description from the Red Book (Lindsley & Zimm 1992)
Gene/Allele symbols may differ from current usage
Mhc: Muscle myosin heavy chain
Structural gene for the heavy chain of muscle myosin (MHC). Heterozygotes for dominant flightless mutant alleles are characterized by erect wings and disrupted myofibrils in the indirect flight muscles. Segmental-deficiency heterozygotes for the locus are also flightless with disrupted myofibrils. Flight can be rescued in heterozygotes for most alleles by addition of a second Mhc+ allele to the complement, or by making the fly simultaneously hemizygous for Act88F [Beall, Sepanski, and Fyrberg, 1989, Genes Dev. 3: 131-40 (fig.)].
Mhc1
Homozygous embryos show no movement; unable to hatch; ultrastructural observations show complete lack of thick filaments in muscles. Heterozygotes display nearly a 50% reduction in the numbers of thick filaments in indirect flight muscles and the tergal-depressor-of-the-trochanter muscle, resulting in disruption of the normal regular array of thick and thin filaments in these muscles. Other less regularly organized muscles, although having reduced numbers of thick filaments, appear to function adequately in Mhc1/+ flies (O'Donnell and Bernstein, 1988, J. Cell Biol. 107: 260-12).
Mhc5
20% of heterozygotes display indented thorax and erect wings and are flightless; the remainder have normal phenotype but fly poorly. Homozygotes display erect wing phenotype. Judged to be antimorphic since not rescued by addition of Dp(2;3)osp3. Mhc5 interaction in double heterozygotes with other flightless mutants observed by Homyk and Emerson (1988, Genetics 119: 105-21). Heterozygous viability severely reduced in combination with hemizygous hdp2, int3, up101; or upx; rare escapers have gnarled legs, walk poorly, and die within two days of eclosion. Females doubly heterozygous for Mhc5 and hdp2, int3, up101; or upx have normal viability but are completely flightless and display abnormal wing posture.
Mhc6
Heterozygotes fly moderately well and display normal wing posture; hemizygotes flightless and occasionally have abnormal wing posture. Double heterozygotes with hdp101, hdp102, int3, up101; or upx; but not hdp2, much more nearly flightless than Mhc6/+; wing posture normal.
Mhc7
Indirect flight muscles accumulate little or no MHC, have no thick filaments, and show no organized myofibrils. The four smaller cells of the tergal depressor of the trochanter muscle (TDT) display reduction in thick filament number and myofibril size; large TDT cells unaffected. Flies jump 33% as well as wild type. Leg muscle MHC found in normal amounts (O'Donnell et al., 1989).
Mhc8
Heterozygotes display indented thorax and erect wings. Judged to be antimorphic since not rescued by addition of Dp(2;3)osp3. Mhc8 interaction in double heterozygotes with other flightless mutants observed by Homyk and Emerson (1988, Genetics 119: 105-21). Heterozygous viability severely reduced in combination with either heterozygous or hemizygous hdp2, int3, and up101; lethal in upx/Y males. No interaction with the following: hdp3, hdp4, hdp5, hdp101, hdp102, up2, up3, or up102.
Mhc9
Indirect flight muscles accumulate little or no MHC, have no thick filaments, and show no organized myofibrils. The four smaller cells of the TDT display reduction in thick filament number and myofibril size; large TDT cells unaffected. Flies jump 59% as well as wild type. Leg muscle MHC found in normal amounts (O'Donnell et al., 1989).
Mhc10
Indirect flight muscles accumulate little or no MHC, have no thick filaments, and show no organized myofibrils. All 32 TDT cells lack thick filaments and lack myofibril organization. Flies cannot jump. Leg muscles accumulate 55% normal amounts of MHC (O'Donnell et al., 1989).
Mhc11
Indirect flight muscles accumulate little or no MHC, have no thick filaments, and show no organized myofibrils. No apparent effect on TDT; unique among alleles in being capable of jumping. Leg muscle MHC found in normal amounts (O'Donnell et al., 1989).
Mhc12
Indirect flight muscles accumulate little or no MHC, have no thick filaments, and show no organized myofibrils. The four smaller cells of the TDT display reduction in thick filament number and myofibril size; large TDT cells unaffected.
Mhc13
A dominant flightless mutation; in homozygotes but not heterozygotes, the myofibrils of dorsolateral indirect flight muscles, although displaying normal morphology at eclosion, degenerate with time so that each cell is composed of a narrow strip of material connected to a bulged-out region. Some areas of the cells contain over-contracted sarcomeres and others show arrays of thick and thin filaments splayed throughout the cytoplasm. Abnormal morphology is recessive. Unlike the situation with other Mhc mutations, the dominant flightlessness of Mhc13 not rescued by the addition of a second dose of Mhc+.
Mhc16
Heterozygotes display indented thorax and erect wings; flightless; hemizygotes semilethal, very inactive, have weak mesothoracic legs which are generally folded beneath the thorax; die prematurely after eclosion. Judged to be antimorphic since not rescued by addition of Dp(2;3)osp3. Mhc16 interaction in double heterozygotes with other flightless mutants observed by Homyk and Emerson (1988, Genetics 119: 105-21). Heterozygous viability severely reduced in combination with hemizygous hdp2, int3, up101; or upx; rare escapers have gnarled legs, walk poorly, and die within two days of eclosion.
Sht: Shrunken thorax
Heterozygotes exhibit an indentation across the dorsal mesothorax giving the appearance of shrunken thorax. Typically a groove runs across the thorax in a V shape. There is some variability in the expressivity; a small fraction of flies have only a marginal phenotype, but the penetrance is nearly complete. Newly emerged flies do not often show the phenotype or have only a faint line on the thorax; the groove becomes visible as the cuticle hardens. Mutant flies have good viability and fertility. Homozygous lethal.
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
Controlled Vocabulary Terms
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
36A8-36B2  
Left limit from inclusion within Df(2L)H20 (FBrf0111447) Right limit from non-inclusion within Df(2L)H68 (FBrf0111447)  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
36B1-36B2  
(determined by in situ hybridisation)  
36A-36A  
36B-36B  
(determined by in situ hybridisation)  
36B-36B  
(determined by in situ hybridisation)  
36B1-36B2  
(determined by in situ hybridisation)  
36B-36B  
(determined by in situ hybridisation)  
36B-36B  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
2-52 or 2-54.7
 
2-51.3
Left of (cM)
Right of (cM)
Notes
Maps 2.8 +/- 0.4 units to the left of cn.
Map position of 26.1, 51.7 and 53.1 based on linkage mapping of Ifm(2)RU1[2], Ifm(2)RU1[3] and Ifm(2)RU1[4], respectively.
Map position of 53.8, 51.6, 52.6, 52.0, 53.5 and 51.5 based on linkage mapping of ifm(2)RU2[10], ifm(2)RU2[11], ifm(2)RU2[12], ifm(2)RU2[13], ifm(2)RU2[14], and ifm(2)RU2[15], respectively.
hide Gene Model & Products
Please see the GBrowse view of Dmel\Mhc for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0307493 FBtr0080905 FBtr0301827 FBtr0080907 FBtr0080902 FBtr0080900 FBtr0080906 FBtr0080901 FBtr0080903 FBtr0080895 FBtr0301829 FBtr0080896 FBtr0080899 FBtr0080898 FBtr0080897 FBtr0301828 FBtr0307494 FBtr0307492 FBtr0307496 FBtr0307495 FBtr0331931 FBtr0080932 FBpp0291041 FBpp0298829 FBpp0080453 FBpp0298827 FBpp0080462 FBpp0080459 FBpp0298828 FBpp0298831 FBpp0080463 FBpp0080456 FBpp0080454 FBpp0291042 FBpp0080457 FBpp0080458 FBpp0080460 FBpp0080464 FBpp0080452 FBpp0298830 FBpp0080455 FBpp0291043 FBpp0304264 FBpp0080486 FBti0006511 FBti0056160 FBti0145305 FBti0014159 FBti0014160 FBti0014161 FBti0056491 FBti0025973 FBti0108159 FBti0070964
Comments on Gene Model
Gene model reviewed during 5.47
Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.
Low-frequency RNA-Seq exon junction(s) not annotated.
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0080896
  6668
  1962
FBtr0080897
  6668
  1962
FBtr0080898
  6668
  1962
FBtr0080900
  6668
  1962
FBtr0080899
  6668
  1962
FBtr0080901
  6668
  1962
FBtr0080895
  6668
  1962
FBtr0080902
  6668
  1962
FBtr0080903
  6668
  1962
FBtr0080906
  7170
  1936
FBtr0080905
  7173
  1936
FBtr0080907
  7170
  1936
FBtr0301827
  6735
  1949
FBtr0301828
  6833
  1962
FBtr0301829
  6732
  1949
FBtr0307492
  6813
  1962
FBtr0307493
  6671
  1962
FBtr0307494
  6826
  1962
FBtr0307495
  6621
  1962
FBtr0307496
  6895
  1949
Additional Transcript Data & Comments
Reported size (kB)
8.6, 8.0, 7.2 (northern blot)
4.5, 4.2 (unknown)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Mhc-PA  
FBpp0080453  
224.6  
1962  
6.06  
Mhc-PB  
FBpp0080454  
224.4  
1962  
6.01  
Mhc-PC  
FBpp0080455  
224.4  
1962  
6.02  
Mhc-PD  
FBpp0080457  
224.5  
1962  
6.02  
Mhc-PE  
FBpp0080456  
224.6  
1962  
6.02  
Mhc-PF  
FBpp0080458  
224.5  
1962  
6.05  
Mhc-PG  
FBpp0080452  
224.5  
1962  
6.06  
Mhc-PH  
FBpp0080459  
224.7  
1962  
6.02  
Mhc-PI  
FBpp0080460  
224.6  
1962  
5.98  
Mhc-PK  
FBpp0080463  
221.4  
1936  
6.10  
Mhc-PL  
FBpp0080462  
221.5  
1936  
6.01  
Mhc-PM  
FBpp0080464  
221.5  
1936  
6.05  
Mhc-PN  
FBpp0291041  
223.0  
1949  
6.19  
Mhc-PO  
FBpp0291042  
224.5  
1962  
6.06  
Mhc-PP  
FBpp0291043  
222.8  
1949  
6.13  
Mhc-PQ  
FBpp0298827  
224.6  
1962  
6.16  
Mhc-PR  
FBpp0298828  
224.3  
1962  
6.06  
Mhc-PS  
FBpp0298829  
224.6  
1962  
6.23  
Mhc-PT  
FBpp0298830  
224.3  
1962  
6.14  
Mhc-PU  
FBpp0298831  
222.9  
1949  
6.14  
Additional Polypeptide Data & Comments
Reported size (kDa)
155 (kD observed)
Comments
Mhc protein in used as a marker for the visceral muscles or their precursors, which overlie the epithelial foregut and hindgut.
one of a couple of products generated by alternative splicing
this fragment corresponds to part of exon 17 encoded by g133629 and all of exon 18 encoded by g1335630; MHC2 RNA found in pupal adult stages only
this fragment corresponds to part of exon 17 encoded by g133629 and all of exon 19 encoded by g1335631; MHC1 RNA found in pupal-adult and embryo-larval stages
one of several products generated by alternative splicing
corresponds to exon16 encoded by g1335628
At least 480 Mhc isoforms are theoretically encoded by the gene when all the different possible combinations of alternate exons are considered. The alternative exons encode sequences close to or within regions thought to have important structural or enzymatic functions. Putative functional domains and regions of exceptional sequence conservation, however, are most often distributed in both alternative and common exons. Some of the characterized domains map to exons as follows: a conserved hydrophobic pocket sequence in exons 3-4, the highly conserved ATP-binding domain in exon 4, the highly divergent proteolytic cleavage site that defines the 25-50kD junction in exon 4, two highly conserved regions of unidentified function in exons 4-6 and 8-9, the 50-20kD junction in exon 10, the primary actin-binding site in exon 10, a secondary actin-binding site in exon 11, the sites of myosin light chain binding in exon 12, the head-tail junction in exon 12, the hinge region in exons 14-16, and the non-coiled tailpiece in exons 17-19.
Predicted from sequence data (J02788). Encoded by transcript containing exon 3a.
Predicted from sequence data (J02788). Encoded by transcript containing exon 3b.
At least two different Mhc proteins are translated from different classes of RNA that are generated by alternative splicing at the 3'' end. One class of Mhc protein has 27 unique amino acids at the C-terminal end.
At least two different Mhc proteins are translated from different classes of RNA that are generated by alternative splicing at the 3'' end. This class of Mhc protein has 27 unique amino acids at the C-terminal end.
At least two different Mhc proteins are translated from different classes of RNA that are generated by alternative splicing at the 3' end. One class of Mhc protein has one unique amino acid at the C-terminal end.
At least two different Mhc proteins are translated from different classes of RNA that are generated by alternative splicing at the 3' end. This class of Mhc protein has 27 unique amino acids at the C-terminal end.
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
 
 
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
regulatory region
regulatory region
regulatory region
regulatory region
regulatory region
regulatory region
regulatory region
regulatory region
regulatory region
regulatory region
regulatory region
regulatory region
regulatory region
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
microinjection
Stage
Tissue/Position (including subcellular localization)
Reference
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
radioisotope in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
The Mhc transcript of this structure is the main form expressed in the TDT (mesothoracic extracoxal depressor muscle 66) and in direct flight muscle 51.
The Mhc transcript of this structure is the main form expressed in direct flight muscle 52 and in esophageal muscle.
The Mhc transcript of this structure is the main form expressed in the indirect flight muscle.
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
Comment:mesodermal cells
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
western blot
Stage
Tissue/Position (including subcellular localization)
Reference
Comment:0-2 hr AEL
Comment:nuclear extract
Additional Descriptive Data
Mhc protein is expressed in the mesodermal cells of the developing embryonic foregut.
The 155kD form of Mhc protein is mainly detected in testis.
Mef2 protein is localized to the nuclei of all embryonic somatic and visceral muscle cells and muscle cell precursors.
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
inferred from direct assay
inferred from direct assay
(assigned by UniProtKB)
inferred from direct assay
inferred from direct assay
(assigned by UniProtKB)
hide Expression Deduced from Reporters
Reporter: P{GAL4-Mhc.W}
Stage
Tissue/Position (including subcellular localization)
Reference
Reporter: P{Mhc-Switch.O}
Stage
Tissue/Position (including subcellular localization)
Reference
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 10
central nervous system, pupae P8
 
 73
head, virgin 1-day female
 
 832
head, virgin 4-day female
 
 274
head, virgin 20-day female
 
 118
head, mated 1-day female
 
 670
head, mated 4-day female
 
 200
head, mated 20-day female
 
 117
head, mated 1-day male
 
 566
head, mated 4-day male
 
 158
head, mated 20-day male
 
 129
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 7
digestive system, 1-day adult
 
 59
digestive system, 4-day adult
 
 71
digestive system, 20-day adult
 
 42
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 40
carcass, larvae L3 wandering
 
 223
carcass, 1-day adult
 
 1612
carcass, 4-day adult
 
 497
carcass, 20-day adult
 
 202
ovary, virgin 4-day female
 
 5
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 9
accessory gland, mated 4-day male
 
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 10
central nervous system, pupae P8
 (73)
head, virgin 1-day female
 (832)
head, virgin 4-day female
 (274)
head, virgin 20-day female
 (118)
head, mated 1-day female
 (670)
head, mated 4-day female
 (200)
head, mated 20-day female
 (117)
head, mated 1-day male
 (566)
head, mated 4-day male
 (158)
head, mated 20-day male
 (129)
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 7
digestive system, 1-day adult
 (59)
digestive system, 4-day adult
 (71)
digestive system, 20-day adult
 (42)
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 (40)
carcass, larvae L3 wandering
 (223)
carcass, 1-day adult
 (1612)
carcass, 4-day adult
 (497)
carcass, 20-day adult
 (202)
ovary, virgin 4-day female
 
 5
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 9
accessory gland, mated 4-day male
 (30)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 10
central nervous system, pupae P8
 
 73
head, virgin 1-day female
 (832)
head, virgin 4-day female
 (274)
head, virgin 20-day female
 (118)
head, mated 1-day female
 (670)
head, mated 4-day female
 (200)
head, mated 20-day female
 (117)
head, mated 1-day male
 (566)
head, mated 4-day male
 (158)
head, mated 20-day male
 (129)
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 7
digestive system, 1-day adult
 
 59
digestive system, 4-day adult
 
 71
digestive system, 20-day adult
 
 42
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 40
carcass, larvae L3 wandering
 (223)
carcass, 1-day adult
 (1612)
carcass, 4-day adult
 (497)
carcass, 20-day adult
 (202)
ovary, virgin 4-day female
 
 5
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 9
accessory gland, mated 4-day male
 
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 10
central nervous system, pupae P8
 
 73
head, virgin 1-day female
 
 832
head, virgin 4-day female
 
 274
head, virgin 20-day female
 
 118
head, mated 1-day female
 
 670
head, mated 4-day female
 
 200
head, mated 20-day female
 
 117
head, mated 1-day male
 
 566
head, mated 4-day male
 
 158
head, mated 20-day male
 
 129
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 7
digestive system, 1-day adult
 
 59
digestive system, 4-day adult
 
 71
digestive system, 20-day adult
 
 42
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 40
carcass, larvae L3 wandering
 
 223
carcass, 1-day adult
 
 1612
carcass, 4-day adult
 
 497
carcass, 20-day adult
 
 202
ovary, virgin 4-day female
 
 5
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 9
accessory gland, mated 4-day male
 
 30
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 10
central nervous system, pupae P8
 
 73
head, virgin 1-day female
 
 832
head, virgin 4-day female
 
 274
head, virgin 20-day female
 
 118
head, mated 1-day female
 
 670
head, mated 4-day female
 
 200
head, mated 20-day female
 
 117
head, mated 1-day male
 
 566
head, mated 4-day male
 
 158
head, mated 20-day male
 
 129
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 7
digestive system, 1-day adult
 
 59
digestive system, 4-day adult
 
 71
digestive system, 20-day adult
 
 42
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 40
carcass, larvae L3 wandering
 
 223
carcass, 1-day adult
 
 1612
carcass, 4-day adult
 
 497
carcass, 20-day adult
 
 202
ovary, virgin 4-day female
 
 5
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 9
accessory gland, mated 4-day male
 
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 10
central nervous system, pupae P8
 (73)
head, virgin 1-day female
 (832)
head, virgin 4-day female
 (274)
head, virgin 20-day female
 (118)
head, mated 1-day female
 (670)
head, mated 4-day female
 (200)
head, mated 20-day female
 (117)
head, mated 1-day male
 (566)
head, mated 4-day male
 (158)
head, mated 20-day male
 (129)
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 7
digestive system, 1-day adult
 (59)
digestive system, 4-day adult
 (71)
digestive system, 20-day adult
 (42)
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 (40)
carcass, larvae L3 wandering
 (223)
carcass, 1-day adult
 (1612)
carcass, 4-day adult
 (497)
carcass, 20-day adult
 (202)
ovary, virgin 4-day female
 
 5
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 9
accessory gland, mated 4-day male
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 10
central nervous system, pupae P8
 
 73
head, virgin 1-day female
 (832)
head, virgin 4-day female
 (274)
head, virgin 20-day female
 118
head, mated 1-day female
 (670)
head, mated 4-day female
 (200)
head, mated 20-day female
 117
head, mated 1-day male
 (566)
head, mated 4-day male
 (158)
head, mated 20-day male
 129
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 7
digestive system, 1-day adult
 
 59
digestive system, 4-day adult
 
 71
digestive system, 20-day adult
 
 42
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 40
carcass, larvae L3 wandering
 (223)
carcass, 1-day adult
 (1612)
carcass, 4-day adult
 (497)
carcass, 20-day adult
 (202)
ovary, virgin 4-day female
 
 5
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 9
accessory gland, mated 4-day male
 
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 6
central nervous system, larvae L3
 
 10
central nervous system, pupae P8
 
 73
head, virgin 1-day female
 
 832
head, virgin 4-day female
 
 274
head, virgin 20-day female
 
 118
head, mated 1-day female
 
 670
head, mated 4-day female
 
 200
head, mated 20-day female
 
 117
head, mated 1-day male
 
 566
head, mated 4-day male
 
 158
head, mated 20-day male
 
 129
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 7
digestive system, 1-day adult
 
 59
digestive system, 4-day adult
 
 71
digestive system, 20-day adult
 
 42
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 40
carcass, larvae L3 wandering
 
 223
carcass, 1-day adult
 
 1612
carcass, 4-day adult
 
 497
carcass, 20-day adult
 
 202
ovary, virgin 4-day female
 
 5
ovary, mated 4-day female
 
 2
testis, mated 4-day male
 
 9
accessory gland, mated 4-day male
 
 30
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 3
embryo 04-06hr
 
 3
embryo 06-08hr
 
 7
embryo 08-10hr
 
 13
embryo 10-12hr
 
 38
embryo 12-14hr
 
 146
embryo 14-16hr
 
 762
embryo 16-18hr
 
 1135
embryo 18-20hr
 
 1629
embryo 20-22hr
 
 1292
embryo 22-24hr
 
 1256
larva L1
 
 996
larva L2
 
 1327
larva L3 12hr old
 
 2417
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 
 508
larva L3 puffstage 7-9
 
 96
white prepupae new
 
 19
white prepupae 12hr
 
 33
white prepupae 24hr
 
 13
pupae 2d postWPP
 
 318
pupae 3d postWPP
 
 2749
pupae 4d postWPP
 
 3422
adult male 01day
 
 1886
adult male 05day
 
 535
adult male 30day
 
 278
adult female 01day
 
 1218
adult female 05day
 
 74
adult female 30day
 
 75
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 3
embryo 04-06hr
 
 3
embryo 06-08hr
 
 7
embryo 08-10hr
 
 13
embryo 10-12hr
 (38)
embryo 12-14hr
 (146)
embryo 14-16hr
 (762)
embryo 16-18hr
 (1135)
embryo 18-20hr
 (1629)
embryo 20-22hr
 (1292)
embryo 22-24hr
 (1256)
larva L1
 (996)
larva L2
 (1327)
larva L3 12hr old
 (2417)
larva L3 puffstage 1-2
 (922)
larva L3 puffstage 3-6
 (508)
larva L3 puffstage 7-9
 (96)
white prepupae new
 
 19
white prepupae 12hr
 (33)
white prepupae 24hr
 
 13
pupae 2d postWPP
 (318)
pupae 3d postWPP
 (2749)
pupae 4d postWPP
 (3422)
adult male 01day
 (1886)
adult male 05day
 (535)
adult male 30day
 (278)
adult female 01day
 (1218)
adult female 05day
 (74)
adult female 30day
 (75)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 3
embryo 04-06hr
 
 3
embryo 06-08hr
 
 7
embryo 08-10hr
 
 13
embryo 10-12hr
 
 38
embryo 12-14hr
 (146)
embryo 14-16hr
 (762)
embryo 16-18hr
 (1135)
embryo 18-20hr
 (1629)
embryo 20-22hr
 (1292)
embryo 22-24hr
 (1256)
larva L1
 (996)
larva L2
 (1327)
larva L3 12hr old
 (2417)
larva L3 puffstage 1-2
 (922)
larva L3 puffstage 3-6
 (508)
larva L3 puffstage 7-9
 
 96
white prepupae new
 
 19
white prepupae 12hr
 
 33
white prepupae 24hr
 
 13
pupae 2d postWPP
 (318)
pupae 3d postWPP
 (2749)
pupae 4d postWPP
 (3422)
adult male 01day
 (1886)
adult male 05day
 (535)
adult male 30day
 (278)
adult female 01day
 (1218)
adult female 05day
 
 74
adult female 30day
 
 75
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 3
embryo 04-06hr
 
 3
embryo 06-08hr
 
 7
embryo 08-10hr
 
 13
embryo 10-12hr
 
 38
embryo 12-14hr
 
 146
embryo 14-16hr
 
 762
embryo 16-18hr
 
 1135
embryo 18-20hr
 
 1629
embryo 20-22hr
 
 1292
embryo 22-24hr
 
 1256
larva L1
 
 996
larva L2
 
 1327
larva L3 12hr old
 
 2417
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 
 508
larva L3 puffstage 7-9
 
 96
white prepupae new
 
 19
white prepupae 12hr
 
 33
white prepupae 24hr
 
 13
pupae 2d postWPP
 
 318
pupae 3d postWPP
 
 2749
pupae 4d postWPP
 
 3422
adult male 01day
 
 1886
adult male 05day
 
 535
adult male 30day
 
 278
adult female 01day
 
 1218
adult female 05day
 
 74
adult female 30day
 
 75
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 3
embryo 04-06hr
 
 3
embryo 06-08hr
 
 7
embryo 08-10hr
 
 13
embryo 10-12hr
 
 38
embryo 12-14hr
 
 146
embryo 14-16hr
 
 762
embryo 16-18hr
 
 1135
embryo 18-20hr
 
 1629
embryo 20-22hr
 
 1292
embryo 22-24hr
 
 1256
larva L1
 
 996
larva L2
 
 1327
larva L3 12hr old
 
 2417
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 
 508
larva L3 puffstage 7-9
 
 96
white prepupae new
 
 19
white prepupae 12hr
 
 33
white prepupae 24hr
 
 13
pupae 2d postWPP
 
 318
pupae 3d postWPP
 
 2749
pupae 4d postWPP
 
 3422
adult male 01day
 
 1886
adult male 05day
 
 535
adult male 30day
 
 278
adult female 01day
 
 1218
adult female 05day
 
 74
adult female 30day
 
 75
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 3
embryo 04-06hr
 
 3
embryo 06-08hr
 
 7
embryo 08-10hr
 
 13
embryo 10-12hr
 (38)
embryo 12-14hr
 (146)
embryo 14-16hr
 (762)
embryo 16-18hr
 (1135)
embryo 18-20hr
 (1629)
embryo 20-22hr
 (1292)
embryo 22-24hr
 (1256)
larva L1
 (996)
larva L2
 (1327)
larva L3 12hr old
 (2417)
larva L3 puffstage 1-2
 (922)
larva L3 puffstage 3-6
 (508)
larva L3 puffstage 7-9
 (96)
white prepupae new
 
 19
white prepupae 12hr
 (33)
white prepupae 24hr
 
 13
pupae 2d postWPP
 (318)
pupae 3d postWPP
 (2749)
pupae 4d postWPP
 (3422)
adult male 01day
 (1886)
adult male 05day
 (535)
adult male 30day
 (278)
adult female 01day
 (1218)
adult female 05day
 (74)
adult female 30day
 (75)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 3
embryo 04-06hr
 
 3
embryo 06-08hr
 
 7
embryo 08-10hr
 
 13
embryo 10-12hr
 
 38
embryo 12-14hr
 (146)
embryo 14-16hr
 (762)
embryo 16-18hr
 (1135)
embryo 18-20hr
 (1629)
embryo 20-22hr
 (1292)
embryo 22-24hr
 (1256)
larva L1
 (996)
larva L2
 (1327)
larva L3 12hr old
 (2417)
larva L3 puffstage 1-2
 (922)
larva L3 puffstage 3-6
 (508)
larva L3 puffstage 7-9
 
 96
white prepupae new
 
 19
white prepupae 12hr
 
 33
white prepupae 24hr
 
 13
pupae 2d postWPP
 (318)
pupae 3d postWPP
 (2749)
pupae 4d postWPP
 (3422)
adult male 01day
 (1886)
adult male 05day
 (535)
adult male 30day
 (278)
adult female 01day
 (1218)
adult female 05day
 
 74
adult female 30day
 
 75
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 3
embryo 02-04hr
 
 3
embryo 04-06hr
 
 3
embryo 06-08hr
 
 7
embryo 08-10hr
 
 13
embryo 10-12hr
 
 38
embryo 12-14hr
 
 146
embryo 14-16hr
 
 762
embryo 16-18hr
 
 1135
embryo 18-20hr
 
 1629
embryo 20-22hr
 
 1292
embryo 22-24hr
 
 1256
larva L1
 
 996
larva L2
 
 1327
larva L3 12hr old
 
 2417
larva L3 puffstage 1-2
 
 922
larva L3 puffstage 3-6
 
 508
larva L3 puffstage 7-9
 
 96
white prepupae new
 
 19
white prepupae 12hr
 
 33
white prepupae 24hr
 
 13
pupae 2d postWPP
 
 318
pupae 3d postWPP
 
 2749
pupae 4d postWPP
 
 3422
adult male 01day
 
 1886
adult male 05day
 
 535
adult male 30day
 
 278
adult female 01day
 
 1218
adult female 05day
 
 74
adult female 30day
 
 75
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 3
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 3
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 3
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 3
ovary OSS
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 3
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 3
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 3
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 0
Schneider line 2 Sg4
 
 0
embryonic 1182-4H
 
 0
embryonic GM2
 
 0
embryonic Kc167
 
 0
embryonic S1
 
 0
embryonic S3
 
 0
leg disc CME L1
 
 0
wing disc CME-W2
 
 0
wing disc ML-DmD8
 
 0
wing disc ML-DmD9
 
 0
wing disc ML-DmD16-c3
 
 0
wing disc ML-DmD21
 
 0
wing disc ML-DmD32
 
 0
haltere disc ML-DmD17-c3
 
 0
eye-antennal disc ML-DmD11
 
 0
antennal disc ML-DmD20-c5
 
 0
mixed discs ML-DmD4-c1
 
 0
CNS ML-DmBG1-c1
 
 0
CNS ML-DmBG2-c2
 
 0
tumorous blood cells mbn2
 
 0
ovary fGS/OSS
 
 0
ovary OSC
 
 3
ovary OSS
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 121
cold shock, 4-day adult
 
 80
heat shock, 4-day adult
 
 552
Cadmium 50 mM 6 hrs, larvae L3
 
 566
Cadmium 50 mM 12 hrs, larvae L3
 
 246
Cadmium 50 mM 48 hrs, 4-day adult
 
 773
Cadmium 100 mM 48 hrs, 4-day adult
 
 72
Copper 0.5 mM 12 hrs, larvae L3
 
 882
Copper 15 mM 48 hrs, 4-day adult
 
 76
Zinc 5 mM 12 hrs, larvae L3
 
 566
Zinc 4.5 mM 48 hrs, 4-day adult
 
 163
Ethanol 2.5% 3 hrs, larvae L3
 
 157
Ethanol 5% 3 hrs, larvae L3
 
 593
Ethanol 10% 3 hrs, larvae L3
 
 633
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 760
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 51
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 126
Paraquat 5 mM 48 hrs, 4-day adult
 
 181
Paraquat 10 mM 48 hrs, 4-day adult
 
 228
Rotenone 2 μg 12 hrs, larvae L3
 
 399
Rotenone 8 μg 12 hrs, larvae L3
 
 896
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 (121)
cold shock, 4-day adult
 (80)
heat shock, 4-day adult
 (552)
Cadmium 50 mM 6 hrs, larvae L3
 (566)
Cadmium 50 mM 12 hrs, larvae L3
 (246)
Cadmium 50 mM 48 hrs, 4-day adult
 (773)
Cadmium 100 mM 48 hrs, 4-day adult
 (72)
Copper 0.5 mM 12 hrs, larvae L3
 (882)
Copper 15 mM 48 hrs, 4-day adult
 (76)
Zinc 5 mM 12 hrs, larvae L3
 (566)
Zinc 4.5 mM 48 hrs, 4-day adult
 (163)
Ethanol 2.5% 3 hrs, larvae L3
 (157)
Ethanol 5% 3 hrs, larvae L3
 (593)
Ethanol 10% 3 hrs, larvae L3
 (633)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 (760)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 (51)
Caffeine 25 mg/ml 48 hrs, 4-day adult
 (126)
Paraquat 5 mM 48 hrs, 4-day adult
 (181)
Paraquat 10 mM 48 hrs, 4-day adult
 (228)
Rotenone 2 μg 12 hrs, larvae L3
 (399)
Rotenone 8 μg 12 hrs, larvae L3
 (896)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 (121)
cold shock, 4-day adult
 
 80
heat shock, 4-day adult
 (552)
Cadmium 50 mM 6 hrs, larvae L3
 (566)
Cadmium 50 mM 12 hrs, larvae L3
 (246)
Cadmium 50 mM 48 hrs, 4-day adult
 (773)
Cadmium 100 mM 48 hrs, 4-day adult
 
 72
Copper 0.5 mM 12 hrs, larvae L3
 (882)
Copper 15 mM 48 hrs, 4-day adult
 
 76
Zinc 5 mM 12 hrs, larvae L3
 (566)
Zinc 4.5 mM 48 hrs, 4-day adult
 (163)
Ethanol 2.5% 3 hrs, larvae L3
 (157)
Ethanol 5% 3 hrs, larvae L3
 (593)
Ethanol 10% 3 hrs, larvae L3
 (633)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 (760)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 51
Caffeine 25 mg/ml 48 hrs, 4-day adult
 (126)
Paraquat 5 mM 48 hrs, 4-day adult
 (181)
Paraquat 10 mM 48 hrs, 4-day adult
 (228)
Rotenone 2 μg 12 hrs, larvae L3
 (399)
Rotenone 8 μg 12 hrs, larvae L3
 (896)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 121
cold shock, 4-day adult
 
 80
heat shock, 4-day adult
 
 552
Cadmium 50 mM 6 hrs, larvae L3
 
 566
Cadmium 50 mM 12 hrs, larvae L3
 
 246
Cadmium 50 mM 48 hrs, 4-day adult
 
 773
Cadmium 100 mM 48 hrs, 4-day adult
 
 72
Copper 0.5 mM 12 hrs, larvae L3
 
 882
Copper 15 mM 48 hrs, 4-day adult
 
 76
Zinc 5 mM 12 hrs, larvae L3
 
 566
Zinc 4.5 mM 48 hrs, 4-day adult
 
 163
Ethanol 2.5% 3 hrs, larvae L3
 
 157
Ethanol 5% 3 hrs, larvae L3
 
 593
Ethanol 10% 3 hrs, larvae L3
 
 633
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 760
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 51
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 126
Paraquat 5 mM 48 hrs, 4-day adult
 
 181
Paraquat 10 mM 48 hrs, 4-day adult
 
 228
Rotenone 2 μg 12 hrs, larvae L3
 
 399
Rotenone 8 μg 12 hrs, larvae L3
 
 896
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 121
cold shock, 4-day adult
 
 80
heat shock, 4-day adult
 
 552
Cadmium 50 mM 6 hrs, larvae L3
 
 566
Cadmium 50 mM 12 hrs, larvae L3
 
 246
Cadmium 50 mM 48 hrs, 4-day adult
 
 773
Cadmium 100 mM 48 hrs, 4-day adult
 
 72
Copper 0.5 mM 12 hrs, larvae L3
 
 882
Copper 15 mM 48 hrs, 4-day adult
 
 76
Zinc 5 mM 12 hrs, larvae L3
 
 566
Zinc 4.5 mM 48 hrs, 4-day adult
 
 163
Ethanol 2.5% 3 hrs, larvae L3
 
 157
Ethanol 5% 3 hrs, larvae L3
 
 593
Ethanol 10% 3 hrs, larvae L3
 
 633
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 760
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 51
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 126
Paraquat 5 mM 48 hrs, 4-day adult
 
 181
Paraquat 10 mM 48 hrs, 4-day adult
 
 228
Rotenone 2 μg 12 hrs, larvae L3
 
 399
Rotenone 8 μg 12 hrs, larvae L3
 
 896
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 (121)
cold shock, 4-day adult
 (80)
heat shock, 4-day adult
 (552)
Cadmium 50 mM 6 hrs, larvae L3
 (566)
Cadmium 50 mM 12 hrs, larvae L3
 (246)
Cadmium 50 mM 48 hrs, 4-day adult
 (773)
Cadmium 100 mM 48 hrs, 4-day adult
 (72)
Copper 0.5 mM 12 hrs, larvae L3
 (882)
Copper 15 mM 48 hrs, 4-day adult
 (76)
Zinc 5 mM 12 hrs, larvae L3
 (566)
Zinc 4.5 mM 48 hrs, 4-day adult
 (163)
Ethanol 2.5% 3 hrs, larvae L3
 (157)
Ethanol 5% 3 hrs, larvae L3
 (593)
Ethanol 10% 3 hrs, larvae L3
 (633)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 (760)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 (51)
Caffeine 25 mg/ml 48 hrs, 4-day adult
 (126)
Paraquat 5 mM 48 hrs, 4-day adult
 (181)
Paraquat 10 mM 48 hrs, 4-day adult
 (228)
Rotenone 2 μg 12 hrs, larvae L3
 (399)
Rotenone 8 μg 12 hrs, larvae L3
 (896)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 121
cold shock, 4-day adult
 
 80
heat shock, 4-day adult
 (552)
Cadmium 50 mM 6 hrs, larvae L3
 (566)
Cadmium 50 mM 12 hrs, larvae L3
 (246)
Cadmium 50 mM 48 hrs, 4-day adult
 (773)
Cadmium 100 mM 48 hrs, 4-day adult
 
 72
Copper 0.5 mM 12 hrs, larvae L3
 (882)
Copper 15 mM 48 hrs, 4-day adult
 
 76
Zinc 5 mM 12 hrs, larvae L3
 (566)
Zinc 4.5 mM 48 hrs, 4-day adult
 (163)
Ethanol 2.5% 3 hrs, larvae L3
 (157)
Ethanol 5% 3 hrs, larvae L3
 (593)
Ethanol 10% 3 hrs, larvae L3
 (633)
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 (760)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 51
Caffeine 25 mg/ml 48 hrs, 4-day adult
 126
Paraquat 5 mM 48 hrs, 4-day adult
 (181)
Paraquat 10 mM 48 hrs, 4-day adult
 (228)
Rotenone 2 μg 12 hrs, larvae L3
 (399)
Rotenone 8 μg 12 hrs, larvae L3
 (896)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 121
cold shock, 4-day adult
 
 80
heat shock, 4-day adult
 
 552
Cadmium 50 mM 6 hrs, larvae L3
 
 566
Cadmium 50 mM 12 hrs, larvae L3
 
 246
Cadmium 50 mM 48 hrs, 4-day adult
 
 773
Cadmium 100 mM 48 hrs, 4-day adult
 
 72
Copper 0.5 mM 12 hrs, larvae L3
 
 882
Copper 15 mM 48 hrs, 4-day adult
 
 76
Zinc 5 mM 12 hrs, larvae L3
 
 566
Zinc 4.5 mM 48 hrs, 4-day adult
 
 163
Ethanol 2.5% 3 hrs, larvae L3
 
 157
Ethanol 5% 3 hrs, larvae L3
 
 593
Ethanol 10% 3 hrs, larvae L3
 
 633
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 760
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 51
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 126
Paraquat 5 mM 48 hrs, 4-day adult
 
 181
Paraquat 10 mM 48 hrs, 4-day adult
 
 228
Rotenone 2 μg 12 hrs, larvae L3
 
 399
Rotenone 8 μg 12 hrs, larvae L3
 
 896
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
dorsal medial muscle & myofibril
indirect flight muscle & myofibril
indirect flight muscle & sarcomere
indirect flight muscle & striated muscle thick filament
indirect flight muscle & Z disc
mitochondrion & mesothoracic extracoxal depressor muscle 66
myofibril & indirect flight muscle
myofibril & mesothoracic extracoxal depressor muscle 66
myosin filament & embryonic somatic muscle
myosin filament & mesothoracic extracoxal depressor muscle 66
sarcomere & indirect flight muscle
striated muscle thick filament & indirect flight muscle
striated muscle thick filament & mesothoracic extracoxal depressor muscle 66
striated muscle thin filament & indirect flight muscle
striated muscle thin filament & mesothoracic extracoxal depressor muscle 66
hide Classical Alleles ( 66 )
For All Classical Alleles Show

Allele of MhcClassMutagenStocksKnown lesion
Mhc5antimorphic allele - genetic evidence2 Yes
Mhck104232 --
MhcLA004472 --
Mhcd078141 --
MhcMI03941
1 --
Mhc10amorphic allele - genetic evidence
0 Yes
Mhc1loss of function allele, amorphic allele - genetic evidence
0 Yes
Mhc7amorphic allele - genetic evidence
0 Yes
Mhc11
0 Yes
Mhc12
0 --
Mhc13neomorphic allele - genetic evidence0 Yes
Mhc14
0 --
Mhc15antimorphic allele - genetic evidence
0 --
Mhc16antimorphic allele - genetic evidence0 --
Mhc17
0 --
Mhc18
0 --
Mhc190 Yes
Mhc20
0 --
Mhc21
0 --
Mhc278A0 --
Mhc2hypomorphic allele - genetic evidence0 Yes
Mhc2B0 Yes
Mhc2D0 Yes
Mhc2F0 Yes
Mhc2L28810 --
Mhc30 Yes
Mhc40 Yes
Mhc60 Yes
Mhc8antimorphic allele - genetic evidence
0 Yes
Mhc9loss of function allele
0 Yes
MhcD10 Yes
MhcD410 Yes
MhcD450 Yes
MhcD620 Yes
MhcDCS0 --
MhcE1570K0 Yes
MhcFO0 Yes
MhcIfm(2)RU1-20 --
MhcIfm(2)RU1-30 --
MhcIfm(2)RU1-40 --
Mhcifm(2)RU2-10
0 --
Mhcifm(2)RU2-11
0 --
Mhcifm(2)RU2-12
0 --
Mhcifm(2)RU2-13
0 --
Mhcifm(2)RU2-14
0 --
Mhcifm(2)RU2-15
0 --
Mhcifm(2)RU2-20 --
Mhcifm(2)RU2-30 --
Mhcifm(2)RU2-40 --
Mhcifm(2)RU2-50 --
Mhcifm(2)RU2-60 --
Mhcifm(2)RU2-70 --
Mhcifm(2)RU2-80 --
Mhcifm(2)RU2-90 --
MhcL1736P0 Yes
MhcM125
0 --
MhcPT10 Yes
Mhcrv10 --
Mhcrv20 --
Mhcrv30 --
MhcS10 Yes
MhcS20 Yes
MhcSht0 --
Mhcunspecified
0 --
MhcWee-P26
0 Yes
MhcYD07830 --
hide Alleles Carried on Transgenic Constructs ( 69 )
For All Alleles Carried on Transgenic Constructs Show

Allele of MhcClassMutagenStocksKnown lesion
MhcGD14851 Yes
MhcHMS014711 Yes
MhcJF020691 Yes
MhcKK1024021 Yes
Mhc#10 Yes
Mhc#80 Yes
Mhc+Int5.CAG0 Yes
Mhc+Int50 Yes
Mhc+membantimorphic allele - genetic evidence0 Yes
Mhc+t11.70 Yes
Mhc+t12.40 Yes
Mhc+t24.10 Yes
Mhc+t41.90 Yes
Mhc1.T:Ecol\lacZ0 Yes
Mhc15b0 Yes
Mhc2.T:Ecol\lacZ0 Yes
MhcAFΔ#10 Yes
MhcCAG0 Yes
MhccHa0 Yes
MhcdsRNA.Scer\UAS.cUa0 Yes
MhcE701K0 Yes
MhcEMB-11d
0 Yes
MhcEMB-3b0 Yes
MhcEMB-7d0 Yes
MhcEMB-9a0 Yes
MhcEMB-9c11d
0 Yes
MhcEMB-IC0 Yes
MhcEMB.7a7d0 Yes
MhcEMB.7d7a0 Yes
MhcEmb.Act88F.T:Zzzz\His6,T:Zzzz\TEV.CS0 Yes
Mhcemb.ex180 Yes
MhcEmb180 Yes
MhcgD1043.T:Ecol\lacZ0 Yes
MhcgD1048.T:Ecol\lacZ0 Yes
MhcgD1060.T:Ecol\lacZ0 Yes
MhcgD1090.T:Ecol\lacZ0 Yes
MhcgD1105.T:Ecol\lacZ0 Yes
MhcgD1120.T:Ecol\lacZ0 Yes
MhcgD1152.T:Ecol\lacZ0 Yes
MhcgD1168.T:Ecol\lacZ0 Yes
MhcgD1177.T:Ecol\lacZ0 Yes
MhcgD1222.T:Ecol\lacZ0 Yes
MhcgD1242.T:Ecol\lacZ0 Yes
MhcgD1254.T:Ecol\lacZ0 Yes
MhcgD1256.T:Ecol\lacZ0 Yes
MhcgD1265.T:Ecol\lacZ0 Yes
MhcgD1275.T:Ecol\lacZ0 Yes
MhcgD1276.T:Ecol\lacZ0 Yes
MhcgD1320.T:Ecol\lacZ0 Yes
MhcgD1356.T:Ecol\lacZ0 Yes
MhcgD1357.T:Ecol\lacZ0 Yes
MhcgD1362.T:Ecol\lacZ0 Yes
MhcIFI-3a0 Yes
MhcIFI-7a0 Yes
MhcIFI-9b0 Yes
MhcIFI-EC0 Yes
MhcNIG.17927R0 Yes
MhcR21-1.Act88Fantimorphic allele - genetic evidence0 Yes
MhcR57-24.Act88Fantimorphic allele - genetic evidence0 Yes
MhcR759E.t12.40 Yes
MhcΔ450.E180 Yes
MhcΔAT.T:Ecol\lacZ0 Yes
MhcΔB0 Yes
MhcΔD0 Yes
MhcΔi1.T:Ecol\lacZ0 Yes
MhcΔPy0 Yes
MhcΔPyMt+0 Yes
MhcΔPyWt+0 Yes
MhcΔPyWt-0 Yes
hide Aneuploid Aberrations
Disrupted in
Not disrupted in
Duplicated in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap
insertion of mobile activating element
hide Gene Ontology: Function, Process & Cellular Component ( 26 unique terms )
hide Terms Based on Experimental Evidence ( 21 terms )
Molecular Function
CV term
References
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay
inferred from direct assay
(assigned by UniProtKB)
inferred from direct assay
inferred from direct assay
(assigned by UniProtKB)
hide Terms Based on Predictions or Assertions ( 7 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity
inferred from sequence or structural similarity with EMBL:AF042349
inferred from sequence or structural similarity with UniProtKB:P79293
traceable author statement
(assigned by UniProtKB)
Biological Process
CV term
References
traceable author statement
(assigned by UniProtKB)
Cellular Component
CV term
References
inferred from sequence or structural similarity with UniProtKB:P79293
inferred from sequence or structural similarity
hide Sequence Ontology: Class of Gene
 
hide Interactions & Pathways
hide Summary of Physical Interactions
protein-protein
Interacting group
Assay
References
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
anti tag coimmunoprecipitation, peptide massfingerprinting
experimental knowledge based
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Mhc allele
Gene
References
hide External Data
Linkouts
hide Orthologs
hide OrthoDB Orthologs (116) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
hideOrthologs in Drosophila Species (EOG6V17K2)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila simulans
 
 
 
Drosophila simulans
 
 
 
Drosophila sechellia
 
 
 
Drosophila erecta
 
 
 
Drosophila yakuba
 
 
 
Drosophila ananassae
 
 
 
Drosophila pseudoobscura pseudoobscura
 
 
 
Drosophila persimilis
 
 
 
Drosophila willistoni
 
 
 
Drosophila virilis
 
 
 
Drosophila mojavensis
 
 
 
Drosophila grimshawi
 
 
 
hideOrthologs in non-Drosophila Dipterans (EOG6DZ235, EOG6MCX78)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Aedes aegypti
Yellow fever mosquito 
 
Anopheles gambiae
Malaria mosquito 
 
Culex quinquefasciatus
Southern house mosquito 
 
hideOrthologs in non-Dipteran Insects (EOG679D2V, EOG6X6B51)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\GB51653
 
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG003943
 
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH27107
 
Atta cephalotes
Leafcutter ant 
Acep\ACEP16879
 
Atta cephalotes
Leafcutter ant 
Acep\ACEP16870
 
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO22443
 
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO22444
 
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL13881
 
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL26535
 
Linepithema humile
Argentine ant 
Lhum\LH18885
 
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB11868
 
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB11867
 
Solenopsis invicta
Red fire ant 
Sinv\SINV22950
 
Acyrthosiphon pisum
Pea aphid 
 
Bombyx mori
Silkmoth 
 
Bombyx mori
Silkmoth 
 
Pediculus humanus
Human body louse 
 
Tribolium castaneum
Red flour beetle 
 
hideOrthologs in non-Insect Arthropods (EOG6CRJDT)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
 
Daphnia pulex
Water flea 
 
Daphnia pulex
Water flea 
 
Ixodes scapularis
Deer tick 
 
hideOrthologs in non-Arthropod Metazoa (EOG6WX4CC)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Caenorhabditis elegans
Nematode 
 
Caenorhabditis elegans
Nematode 
 
Caenorhabditis elegans
Nematode 
 
Caenorhabditis elegans
Nematode 
 
Caenorhabditis elegans
Nematode 
 
Caenorhabditis elegans
Nematode 
 
Caenorhabditis elegans
Nematode 
 
Strongylocentrotus purpuratus
Purple sea urchin 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Danio rerio
Zebrafish 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Xenopus tropicalis
Western clawed frog 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
hide Human Orthologs (10)
Gene
OMIM
HGNC
 
 
 
 
 
 
 
 
 
 
 
 
 
 
hideAAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 12 )
Bloomington
Harvard
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 277 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: Mhc CG17927
Source for database merge of
Source for merge of: Mhc Ifm(2)RU1 ifm(2)RU2
Source for merge of: Mhc Mrp
Additional comments
Of five EMS-induced alleles that are lethal as homozygotes, three have 9-10 kb inserts with some apparently similar restriction sites (Mogami and Hotta, 1981; Mogami et al., 1986). Three other EMS-induced mutants, which are homozygous viable, are judged to be allelic based on the failure to obtain recombinants between them and the lethal alleles; as yet no molecular characterization available.
 
hide Other Comments
Haploinsufficient locus (not associated with strong haplolethality or haplosterility).
Mhc is involved in tracheal cell migration during the morphogenesis of the dorsal air sac primordium.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
Thick filament assembly and many aspects of myofibrillogenesis are independent of the head of the Mhc protein.
Identified in a screen for modifiers of the Dfd13/Dfd3 mutant phenotype. Shows no interaction with the Pc mutant phenotype.
Mrp is a muscle protein, as established by transgenic analysis. Mrp is expressed in somatic, cardiac and visceral muscles. Mrp protein is a component of the sarcomeric A-band and electron microscopy demonstrates that it is incorporated into the thick filament along with myosin.
155kD protein that is a major component of myofilaments, an abundant testis protein and is expressed in somatic, cardiac and visceral muscles.
Alternative Mhc exons are regulated in appropriate muscles through interactions between intronic alternative splice-specificity elements, nonconsensus exon 11 splice donors and, likely, novel exon-specific alternative splicing factors.
Multiple isoforms of Mhc are not necessary for viability, but different isoforms are critical for specialised functions like flying and jumping.
Variation of a microsatellite within the Mhc locus has been studied in North American populations of D.melanogaster.
Isolated from a D.melanogaster cDNA expression library, using a polyclonal antiserum raised against a D.hydei testis protein as a probe.
Mhc cDNA has been cloned and sequenced. 'minor-myosin', a myosin isoform found in the testis of D.melanogaster and D.hydei, is encoded by a transcript that initiates between exons 12 and 13 of the myosin heavy chain gene.
Ecol\lacZ reporter gene constructs demonstrate that Mhc is transcriptionally regulated by multiple tissue specific enhancer elements during development.
P-element transformation of a construct carrying a functional copy of Mhc demonstrates overexpression may disrupt the function of not only the indirect flight but also other muscles of the fly.
Mhc protein isoform size class A is organised in a tissue specific manner within the thorax and legs in late pupal and adult stages of development.
Genetic, biochemical and ultrastructural analysis indicates residue 482 is important for generating ATPase activity and for myosin stability in the muscle.
The Mhc and Dhyd\Mhc genes (of D.melanogaster and D.hydei respectively) have been compared.
Two different phylogenetic methods used to analyse all available myosin head sequences: there are at least three equally divergent classes of myosin, demonstrating that the current classification into two classes needs to be reexamined.
The regulation of alternative splicing of Mhc transcripts has been analysed using a cell-free system. The affinity of exons 17 and 19, as well as the failure of constitutive splicing factors to recognise exon 18 splice sites, probably causes the exclusion of exon 18 in wild-type transcripts processed in vitro.
Double mutant analysis with Mhc alleles suggests that actomyosin interactions exacerbate the structural or functional defect resulting from mutation in wupA.
Analysis of myosin heavy chain antibody staining in Drosophila tissue culture cells and premyogenic embryos suggests that zip rather than Mhc is associated with the nuclear envelope.
Altered pattern of Mhc gene expression in neurogenic mutants indicates a role for the neurogenic genes in the development of most visceral and somatic muscles.
The expression pattern of alternatively spliced Mhc exons in the adult thoracic muscles has been investigated.
Sequences necessary for tissue-specific splicing of Mhc have been investigated.
The tissue specific expression pattern of three alternative exons of Mhc has been studied.
Myofibrillar assembly was investigated using null mutations of Act88F and Mhc.
Genomic DNA from the 3' end of the Mhc gene, and cDNA clones have been cloned and sequenced. Four distinct RNAs are transcribed from the Mhc gene.
Isolated from a genomic library using C.elegans myosin heavy chain DNA as a probe. Mhc maps within a cluster of flight muscle mutations on the second chromosome.
Mhc has been cloned, and its expression pattern analysed.
Structural gene for the heavy chain of muscle myosin (MHC). Heterozygotes for dominant flightless mutant alleles are characterized by erect wings and disrupted myofibrils in the indirect flight muscles. Segmental-deficiency heterozygotes for the locus are also flightless with disrupted myofibrils. Flight can be rescued in heterozygotes for most alleles by addition of a second Mhc+ allele to the complement, or by making the fly simultaneously hemizygous for Act88F (Beall, Sepanski, and Fyrberg, 1989).
 
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
hide Synonyms & Secondary IDs ( 58 )
Reported As
Symbol Synonym
DroMII
l(2)36Ae
 
l(2)M66
 
Mhc
(Kazemian et al., 2011, FlyBase, 1992-, Taniguchi et al., 2007, Salvi et al., 2012, Ramanath et al., 2011, Bryantsev et al., 2012, Irion, 2012, Caldwell et al., 2012, Kronert et al., 2012, Chen et al., 2008, Cammarato et al., 2008, Kallappagoudar et al., 2010, Rees et al., 2011, Yang et al., 2010, Soler and Taylor, 2009, Rubinstein et al., 2010, Rui et al., 2010, Miller et al., 2007, Bloemink et al., 2011, Yang et al., 2011, Weake et al., 2011, Eldred et al., 2010, Swank et al., 2000, Wasbrough et al., 2010, Yang et al., 2008, Hao et al., 2006, Swank et al., 2006, Swank et al., 2004, Cammarato et al., 2004, Suggs et al., 2007, Miller et al., 2005, Burgess et al., 2004, Vikhorev et al., 2010, Lorbeck et al., 2010, Hess et al., 2007, Qiu et al., 2005, Texada et al., 2007, Clark et al., 2006, Gajewski et al., 2006, Wells et al., 1996, Shigenobu et al., 2006, Elliott et al., 2007, Montana and Littleton, 2006, Hughes and Thomas, 2007, Swank et al., 2006, Larsen et al., 2006, Quinones-Coello, 2007, Quinones-Coello, 2007, Langer et al., 2010, Sparrow and Orfanos, 2008, Bryantsev et al., 2008, Dietzl et al., 2007, Lindsley and Zimm, 1992, Schnorrer et al., 2007, Akdemir et al., 2007, Ayme-Southgate et al., 2004, Liotta et al., 2007, Clayton et al., 1998, Nongthomba et al., 2007, Tanaka et al., 2008, Sandmann et al., 2006, Carrasco-Rando and Ruiz-Gómez, 2008, Bai et al., 2008, Hudson et al., 2008, Elgar et al., 2008, Wong et al., 2008, Henkin et al., 2004, Junion et al., 2007, Middleton et al., 2006, Bahri et al., 2009, Kurapati et al., 2004, Miller et al., 2009, Chanana et al., 2007, Barton et al., 2005, Bloemink et al., 2009, Klingseisen et al., 2009, García-Zaragoza et al., 2008, Okamoto et al., 2005, Odronitz and Kollmar, 2008, Kronert et al., 2010, Kronert et al., 2008, Schnorrer et al., 2010, Beckett et al., 2008, Bulchand et al., 2010, Cook et al., 2012, Wang et al., 2012, Kaushik et al., 2012, Chechenova et al., 2013)
MHC
(Jordán-Álvarez et al., 2012, Dobi et al., 2011, Nir et al., 2012, Kaushik et al., 2011, Geisbrecht et al., 2008, Miller et al., 2011, Liu and Geisbrecht, 2011, Dutta et al., 2010, Miller et al., 2008, Cammarato et al., 2011, Llorens et al., 2007, Yuan et al., 2010, Miller et al., 2007, Rivlin et al., 2004, Dutta et al., 2005, Polyak et al., 2003, Kwon et al., 2005, Soler et al., 2004, Royou et al., 2002, Tzolovsky et al., 2001, Bernstein, 1990.5.8, Vorbruggen and Jackle, 1997, Riechmann et al., 1997, Raghavan and White, 1997, Shishido et al., 1997, Papaceit and Juan, 1993, Vinos et al., 1992, Wells et al., 1992, Becker et al., 1992, Hastings and Emerson, 1991, Kronert et al., 1991, Hess and Bernstein, 1991, Michelson et al., 1990, Rozek and Davidson, 1986, Bernard et al., 2006, Lovato et al., 2005, Reddy et al., 2006, Loren et al., 2003, Galindo et al., 2006, Volohonsky et al., 2007, Beuchle et al., 2007, Jani and Schock, 2007, Loer et al., 2008, Johnson et al., 2007, Kim et al., 2007, Bai et al., 2007, Massarwa et al., 2007, Toledano-Katchalski et al., 2007, Duan et al., 2007, Nishimura et al., 2007, Dubois et al., 2007, Estrada et al., 2007, Homem and Peifer, 2008, Wasser et al., 2007, Littlefield et al., 2003, Staudt et al., 2005, Qian and Bodmer, 2009, Wayburn and Volk, 2009, Godenschwege et al., 2009, Bahri et al., 2001, Littlefield et al., 2008, Uehara et al., 2010, Sens et al., 2010, Navarro et al., 2011, Elias et al., 2012, Duan et al., 2012, Labeau-Dimenna et al., 2012)
Mrp
 
Nup
 
Stp
 
Name Synonym
beta-myosin heavy chain
heavy chain
Indirect flight muscle (2) RU1
indirect flight muscle (2) RU2
Muscle Myosin
Muscle myosin heavy chain
muscle myosin-II
muscle myosin II
muscle myosin II heavy chain
muscle Myosin II heavy chain
muscle specific myosin II
myosin heavy
Myosin Heavy Chain-PF
myosin heavy-chain protein
Myosin rod protein
Not-upheld
 
sarcomeric myosin heavy-chain
Shrunken-thorax
 
Shrunken thorax
Stuckup
 
Secondary FlyBase IDs
  • FBgn0002741
  • FBgn0010142
  • FBgn0020400
  • FBgn0021948
  • FBgn0028640
  • FBgn0028724
  • FBgn0086783
hide References ( 498 )
Generate a list of
List References by type
hide Recent research papers ( 35 )
Chechenova et al., 2013, J. Biol. Chem. 288(6): 3718--3726
The Drosophila Z-disc Protein Z(210) Is an Adult Muscle Isoform of Zasp52, Which Is Required for Normal Myofibril Organization in Indirect Flight Muscles. [FBrf0220782]
Orfanos and Sparrow, 2013, J. Cell Sci. 126(1): 139--148
Myosin isoform switching during assembly of the Drosophila flight muscle thick filament lattice. [FBrf0221075]
Bryantsev et al., 2012, Dev. Biol. 361(2): 191--207
Differential requirements for Myocyte Enhancer Factor-2 during adult myogenesis in Drosophila. [FBrf0217023]
Caldwell et al., 2012, Methods 56(1): 25--32
Transgenic expression and purification of myosin isoforms using the Drosophila melanogaster indirect flight muscle system. [FBrf0217715]
Cook et al., 2012, Genome Biol. 13(3): R21
The generation of chromosomal deletions to provide extensive coverage and subdivision of the Drosophila melanogaster genome. [FBrf0219066]
Duan et al., 2012, J. Cell Biol. 199(1): 169--185
Group I PAKs function downstream of Rac to promote podosome invasion during myoblast fusion in vivo. [FBrf0219579]
Elias et al., 2012, J. Cell Sci. 125(13): 3185--3194
A crucial role for Ras suppressor-1 (RSU-1) revealed when PINCH and ILK binding is disrupted. [FBrf0219315]
Gaertner et al., 2012, Cell Rep. 2(6): 1670--1683
Poised RNA Polymerase II Changes over Developmental Time and Prepares Genes for Future Expression. [FBrf0220312]
Heckscher et al., 2012, J. Neurosci. 32(36): 12460--12471
Characterization of Drosophila larval crawling at the level of organism, segment, and somatic body wall musculature. [FBrf0219387]
Irion, 2012, PLoS ONE 7(3): e34248
Drosophila muscleblind Codes for Proteins with One and Two Tandem Zinc Finger Motifs. [FBrf0218003]
Jordán-Álvarez et al., 2012, J. Cell Sci. 125(15): 3621--3629
Presynaptic PI3K activity triggers the formation of glutamate receptors at neuromuscular terminals of Drosophila. [FBrf0219610]
Katzemich et al., 2012, J. Cell Sci. 125(14): 3367--3379
The function of the M-line protein obscurin in controlling the symmetry of the sarcomere in the flight muscle of Drosophila. [FBrf0219368]
Kronert et al., 2012, J. Mol. Biol. 416(4): 543--557
Alternative relay and converter domains tune native muscle Myosin isoform function in Drosophila. [FBrf0217468]
Labeau-Dimenna et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(44): 17983--17988
Thin, a Trim32 ortholog, is essential for myofibril stability and is required for the integrity of the costamere in Drosophila. [FBrf0219862]
Lahaye et al., 2012, PLoS ONE 7(3): e32297
WNT5 Interacts with the Ryk Receptors Doughnut and Derailed to Mediate Muscle Attachment Site Selection in Drosophila melanogaster. [FBrf0217725]
Nir et al., 2012, PLoS Genet. 8(3): e1002632
Phosphorylation of the Drosophila melanogaster RNA-Binding Protein HOW by MAPK/ERK Enhances Its Dimerization and Activity. [FBrf0217996]
Petzoldt et al., 2012, Development 139(10): 1874--1884
DE-Cadherin regulates unconventional Myosin ID and Myosin IC in Drosophila left-right asymmetry establishment. [FBrf0218056]
Salvi et al., 2012, J. Mol. Biol. 419(1-2): 22--40
Mutations in Drosophila Myosin rod cause defects in myofibril assembly. [FBrf0218156]
Wang et al., 2012, Mol. Biol. Cell 23(11): 2057--2065
Expression of the inclusion body myopathy 3 mutation in Drosophila depresses myosin function and stability and recapitulates muscle inclusions and weakness. [FBrf0218517]
Bloemink et al., 2011, J. Biol. Chem. 286(32): 28435--28443
Two Drosophila Myosin Transducer Mutants with Distinct Cardiomyopathies Have Divergent ADP and Actin Affinities. [FBrf0214653]
Cammarato et al., 2011, PLoS ONE 6(4): e18497
A Mighty Small Heart: The Cardiac Proteome of Adult Drosophila melanogaster. [FBrf0213610]
Dobi et al., 2011, Fly 5(2): 68--75
Characterization of early steps in muscle morphogenesis in a Drosophila primary culture system. [FBrf0213797]
Kaushik et al., 2011, Biophys. J. 101(11): 2629--2637
In situ mechanical analysis of myofibrillar perturbation and aging on soft, bilayered Drosophila myocardium. [FBrf0217250]
Kazemian et al., 2011, Nucleic Acids Res. 39(22): 9463--9472
Improved accuracy of supervised CRM discovery with interpolated Markov models and cross-species comparison. [FBrf0216971]
Lim et al., 2011, FEBS Lett. 585(19): 3079--3085
The endogenous siRNA pathway in Drosophila impacts stress resistance and lifespan by regulating metabolic homeostasis. [FBrf0216303]
Liu and Geisbrecht, 2011, Dev. Biol. 359(2): 176--189
Moleskin is essential for the formation of the myotendinous junction in Drosophila. [FBrf0216515]
Melkani et al., 2011, PLoS ONE 6(7): e22579
The UNC-45 Chaperone Is Critical for Establishing Myosin-Based Myofibrillar Organization and Cardiac Contractility in the Drosophila Heart Model. [FBrf0214543]
Miller et al., 2011, J. Neurosci. 31(14): 5335--5347
Drosophila mmp2 regulates the matrix molecule faulty attraction (frac) to promote motor axon targeting in Drosophila. [FBrf0213409]
Navarro et al., 2011, PLoS ONE 6(7): e21017
Overexpression of human and fly frataxins in Drosophila provokes deleterious effects at biochemical, physiological and developmental levels. [FBrf0214483]
Ramanath et al., 2011, Biophys. J. 101(5): 1114--1122
Disrupting the Myosin converter-relay interface impairs Drosophila indirect flight muscle performance. [FBrf0215057]
Rees et al., 2011, Mol. Cell. Proteomics 10(6): M110.002386
In Vivo Analysis of Proteomes and Interactomes Using Parallel Affinity Capture (iPAC) Coupled to Mass Spectrometry. [FBrf0213845]
Sun et al., 2011, PLoS ONE 6(4): e18215
Systems-scale analysis reveals pathways involved in cellular response to methamphetamine. [FBrf0213560]
Texada et al., 2011, Exp. Cell Res. 317(4): 474--487
Tropomyosin is an interaction partner of the Drosophila coiled coil protein Yuri Gagarin. [FBrf0212786]
Weake et al., 2011, Genes Dev. 25(14): 1499--1509
Post-transcription initiation function of the ubiquitous SAGA complex in tissue-specific gene activation. [FBrf0214372]
Yang et al., 2011, Nat. Struct. Mol. Biol. 18(2): 159--168
RNA secondary structure in mutually exclusive splicing. [FBrf0214471]
hide Recent reviews ( 1 )
Kaushik et al., 2012, J. Cell. Mol. Med. 16(8): 1656--1662
Measuring passive myocardial stiffness in Drosophila melanogaster to investigate diastolic dysfunction. [FBrf0219008]